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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for VN1R1

check button Gene summary
Gene informationGene symbol

VN1R1

Gene ID

57191

Gene namevomeronasal 1 receptor 1
SynonymsV1RL1|VNR19I1|ZVNH1|ZVNR1
Cytomap

19q13.43

Type of geneprotein-coding
Descriptionvomeronasal type-1 receptor 1G-protein coupled receptor GPCR24V1R-like 1V1r-like receptor 1V3r-related gene proteinhGPCR24vomeronasal olfactory receptor chromosome 19 subtype I member 1vomeronasal olfactory receptor, (chromosome 19) subtype I, memb
Modification date20200313
UniProtAcc

Q9GZP7,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for VN1R1

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_785321(57454846, -), ADediting_785322(57454856, -), ADediting_785323(57454866, -), ADediting_785324(57454881, -), ADediting_785325(57454967, -), ADediting_785326(57455009, -), ADediting_785327(57455010, -), ADediting_785328(57455018, -), ADediting_785329(57455026, -), ADediting_785330(57455028, -), ADediting_785331(57455738, -), ADediting_785332(57455747, -), ADediting_785333(57455799, -), ADediting_785334(57455884, -), ADediting_785335(57456616, -), ADediting_785336(57456677, -), ADediting_785337(57456719, -), ADediting_785338(57456721, -), ADediting_785339(57456724, -), ADediting_785340(57456726, -), ADediting_785341(57456729, -), ADediting_785342(57456730, -), ADediting_785343(57456731, -), ADediting_785344(57456740, -), ADediting_785345(57456743, -), ADediting_785346(57456746, -), ADediting_785347(57456761, -), ADediting_785348(57456764, -), ADediting_785349(57456766, -), ADediting_785350(57456776, -), ADediting_785351(57456777, -), ADediting_785352(57456778, -), ADediting_785353(57456779, -), ADediting_785354(57456780, -), ADediting_785355(57456784, -), ADediting_785356(57456786, -), ADediting_785357(57456787, -), ADediting_785358(57456789, -), ADediting_785359(57456790, -), ADediting_785360(57456793, -), ADediting_785361(57456794, -), ADediting_785362(57456796, -), ADediting_785363(57456800, -), ADediting_785364(57456803, -), ADediting_785365(57456804, -), ADediting_785366(57456806, -), ADediting_785367(57456817, -), ADediting_785368(57456818, -), ADediting_785369(57456820, -), ADediting_785370(57456821, -), ADediting_785371(57456822, -), ADediting_785372(57456826, -), ADediting_785373(57456833, -), ADediting_785374(57456838, -), ADediting_785375(57456839, -), ADediting_785376(57456843, -), ADediting_785377(57456848, -), ADediting_785378(57456854, -), ADediting_785379(57456869, -), ADediting_785380(57456920, -), ADediting_785381(57456930, -), ADediting_785382(57456931, -), ADediting_785383(57456970, -), ADediting_785384(57456973, -), ADediting_785385(57457021, -), ADediting_785386(57457029, -), ADediting_785387(57457033, -), ADediting_785388(57457035, -), ADediting_785389(57457038, -), ADediting_785390(57457041, -), ADediting_785391(57457044, -), ADediting_785392(57457089, -), ADediting_785393(57457092, -), ADediting_785394(57457102, -), ADediting_785395(57457127, -), ADediting_785396(57457131, -), ADediting_785397(57457132, -), ADediting_785398(57457138, -), ADediting_1559307(57454904, -), ADediting_1559308(57454968, -), ADediting_1559309(57456791, -), ADediting_1559310(57456834, -), ADediting_1559311(57456923, -),

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RNA editing positional annotations for VN1R1 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
ADediting_785331chr19_57455738_-nonsynonymous SNVENST00000321039.4c.A749Gp.K250R0.0730.664-2.38
ADediting_785332chr19_57455747_-nonsynonymous SNVENST00000321039.4c.A740Gp.Y247C0.0080.535-4.24
ADediting_785333chr19_57455799_-nonsynonymous SNVENST00000321039.4c.A688Gp.M230V1.00.0240.35
ADediting_785334chr19_57455884_-synonymous SNVENST00000321039.4c.A603Gp.A201A...

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_785321chr19_57454846_-UTR3
ADediting_785322chr19_57454856_-UTR3
ADediting_785323chr19_57454866_-UTR3
ADediting_785324chr19_57454881_-UTR3
ADediting_785325chr19_57454967_-UTR3
ADediting_785326chr19_57455009_-UTR3
ADediting_785327chr19_57455010_-UTR3
ADediting_785328chr19_57455018_-UTR3
ADediting_785329chr19_57455026_-UTR3
ADediting_785330chr19_57455028_-UTR3
ADediting_785331chr19_57455738_-exonic
ADediting_785332chr19_57455747_-exonic
ADediting_785333chr19_57455799_-exonic
ADediting_785334chr19_57455884_-exonic
ADediting_785335chr19_57456616_-UTR5
ADediting_785336chr19_57456677_-UTR5
ADediting_785337chr19_57456719_-UTR5
ADediting_785338chr19_57456721_-UTR5
ADediting_785339chr19_57456724_-UTR5
ADediting_785340chr19_57456726_-UTR5
ADediting_785341chr19_57456729_-UTR5
ADediting_785342chr19_57456730_-UTR5
ADediting_785343chr19_57456731_-UTR5
ADediting_785344chr19_57456740_-UTR5
ADediting_785345chr19_57456743_-UTR5
ADediting_785346chr19_57456746_-UTR5
ADediting_785347chr19_57456761_-UTR5
ADediting_785348chr19_57456764_-UTR5
ADediting_785349chr19_57456766_-UTR5
ADediting_785350chr19_57456776_-UTR5
ADediting_785351chr19_57456777_-UTR5
ADediting_785352chr19_57456778_-UTR5
ADediting_785353chr19_57456779_-UTR5
ADediting_785354chr19_57456780_-UTR5
ADediting_785355chr19_57456784_-UTR5
ADediting_785356chr19_57456786_-UTR5
ADediting_785357chr19_57456787_-UTR5
ADediting_785358chr19_57456789_-UTR5
ADediting_785359chr19_57456790_-UTR5
ADediting_785360chr19_57456793_-UTR5
ADediting_785361chr19_57456794_-UTR5
ADediting_785362chr19_57456796_-UTR5
ADediting_785363chr19_57456800_-UTR5
ADediting_785364chr19_57456803_-UTR5
ADediting_785365chr19_57456804_-UTR5
ADediting_785366chr19_57456806_-UTR5
ADediting_785367chr19_57456817_-UTR5
ADediting_785368chr19_57456818_-UTR5
ADediting_785369chr19_57456820_-UTR5
ADediting_785370chr19_57456821_-UTR5
ADediting_785371chr19_57456822_-UTR5
ADediting_785372chr19_57456826_-UTR5
ADediting_785373chr19_57456833_-UTR5
ADediting_785374chr19_57456838_-UTR5
ADediting_785375chr19_57456839_-UTR5
ADediting_785376chr19_57456843_-UTR5
ADediting_785377chr19_57456848_-UTR5
ADediting_785378chr19_57456854_-UTR5
ADediting_785379chr19_57456869_-UTR5
ADediting_785380chr19_57456920_-UTR5
ADediting_785381chr19_57456930_-UTR5
ADediting_785382chr19_57456931_-UTR5
ADediting_785383chr19_57456970_-UTR5
ADediting_785384chr19_57456973_-UTR5
ADediting_785385chr19_57457021_-UTR5
ADediting_785386chr19_57457029_-UTR5
ADediting_785387chr19_57457033_-UTR5
ADediting_785388chr19_57457035_-UTR5
ADediting_785389chr19_57457038_-UTR5
ADediting_785390chr19_57457041_-UTR5
ADediting_785391chr19_57457044_-UTR5
ADediting_785392chr19_57457089_-UTR5
ADediting_785393chr19_57457092_-UTR5
ADediting_785394chr19_57457102_-UTR5
ADediting_785395chr19_57457127_-UTR5
ADediting_785396chr19_57457131_-UTR5
ADediting_785397chr19_57457132_-UTR5
ADediting_785398chr19_57457138_-UTR5
ADediting_1559307chr19_57454904_-UTR3
ADediting_1559308chr19_57454968_-UTR3
ADediting_1559309chr19_57456791_-UTR5
ADediting_1559310chr19_57456834_-UTR5
ADediting_1559311chr19_57456923_-UTR5

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_785321chr19_57454846_-SINEAluName=AluSz6
ADediting_785322chr19_57454856_-SINEAluName=AluSz6
ADediting_785323chr19_57454866_-SINEAluName=AluSz6
ADediting_785324chr19_57454881_-SINEAluName=AluSz6
ADediting_785325chr19_57454967_-SINEAluName=AluSz6
ADediting_785326chr19_57455009_-SINEAluName=AluSz6
ADediting_785327chr19_57455010_-SINEAluName=AluSz6
ADediting_785328chr19_57455018_-SINEAluName=AluSz6
ADediting_785329chr19_57455026_-SINEAluName=AluSz6
ADediting_785330chr19_57455028_-SINEAluName=AluSz6
ADediting_785336chr19_57456677_-LINEL1Name=L1MD2
ADediting_785337chr19_57456719_-LINEL1Name=L1MD2
ADediting_785338chr19_57456721_-LINEL1Name=L1MD2
ADediting_785339chr19_57456724_-LINEL1Name=L1MD2
ADediting_785340chr19_57456726_-LINEL1Name=L1MD2
ADediting_785341chr19_57456729_-LINEL1Name=L1MD2
ADediting_785342chr19_57456730_-LINEL1Name=L1MD2
ADediting_785343chr19_57456731_-LINEL1Name=L1MD2
ADediting_785344chr19_57456740_-LINEL1Name=L1MD2
ADediting_785345chr19_57456743_-LINEL1Name=L1MD2
ADediting_785346chr19_57456746_-LINEL1Name=L1MD2
ADediting_785347chr19_57456761_-LINEL1Name=L1MD2
ADediting_785348chr19_57456764_-LINEL1Name=L1MD2
ADediting_785349chr19_57456766_-LINEL1Name=L1MD2
ADediting_785350chr19_57456776_-LINEL1Name=L1MD2
ADediting_785351chr19_57456777_-LINEL1Name=L1MD2
ADediting_785352chr19_57456778_-LINEL1Name=L1MD2
ADediting_785353chr19_57456779_-LINEL1Name=L1MD2
ADediting_785354chr19_57456780_-LINEL1Name=L1MD2
ADediting_785355chr19_57456784_-LINEL1Name=L1MD2
ADediting_785356chr19_57456786_-LINEL1Name=L1MD2
ADediting_785357chr19_57456787_-LINEL1Name=L1MD2
ADediting_785358chr19_57456789_-LINEL1Name=L1MD2
ADediting_785359chr19_57456790_-LINEL1Name=L1MD2
ADediting_785360chr19_57456793_-LINEL1Name=L1MD2
ADediting_785361chr19_57456794_-LINEL1Name=L1MD2
ADediting_785362chr19_57456796_-LINEL1Name=L1MD2
ADediting_785363chr19_57456800_-LINEL1Name=L1MD2
ADediting_785364chr19_57456803_-LINEL1Name=L1MD2
ADediting_785365chr19_57456804_-LINEL1Name=L1MD2
ADediting_785366chr19_57456806_-LINEL1Name=L1MD2
ADediting_785367chr19_57456817_-LINEL1Name=L1MD2
ADediting_785368chr19_57456818_-LINEL1Name=L1MD2
ADediting_785369chr19_57456820_-LINEL1Name=L1MD2
ADediting_785370chr19_57456821_-LINEL1Name=L1MD2
ADediting_785371chr19_57456822_-LINEL1Name=L1MD2
ADediting_785372chr19_57456826_-LINEL1Name=L1MD2
ADediting_785373chr19_57456833_-LINEL1Name=L1MD2
ADediting_785374chr19_57456838_-LINEL1Name=L1MD2
ADediting_785375chr19_57456839_-LINEL1Name=L1MD2
ADediting_785383chr19_57456970_-SINEAluName=AluSx3
ADediting_785384chr19_57456973_-SINEAluName=AluSx3
ADediting_785385chr19_57457021_-SINEAluName=AluSx3
ADediting_785386chr19_57457029_-SINEAluName=AluSx3
ADediting_785387chr19_57457033_-SINEAluName=AluSx3
ADediting_785388chr19_57457035_-SINEAluName=AluSx3
ADediting_785389chr19_57457038_-SINEAluName=AluSx3
ADediting_785390chr19_57457041_-SINEAluName=AluSx3
ADediting_785391chr19_57457044_-SINEAluName=AluSx3
ADediting_785392chr19_57457089_-SINEAluName=AluSx3
ADediting_785393chr19_57457092_-SINEAluName=AluSx3
ADediting_785394chr19_57457102_-SINEAluName=AluSx3
ADediting_785395chr19_57457127_-SINEAluName=AluSx3
ADediting_785396chr19_57457131_-SINEAluName=AluSx3
ADediting_785397chr19_57457132_-SINEAluName=AluSx3
ADediting_785398chr19_57457138_-SINEAluName=AluSx3
ADediting_1559307chr19_57454904_-SINEAluName=AluSz6
ADediting_1559308chr19_57454968_-SINEAluName=AluSz6
ADediting_1559309chr19_57456791_-LINEL1Name=L1MD2
ADediting_1559310chr19_57456834_-LINEL1Name=L1MD2

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RNA A-to-I editing events in the alternative splicing sites for VN1R1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VN1R1

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for VN1R1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for VN1R1

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1559307chr19_57454904_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-3119chr1957454902574549087mer-m85745490157454919148-14.2
ADediting_1559307chr19_57454904_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-3140-3pchr1957454903574549097mer-m85745490257454927141-15.65
ADediting_1559307chr19_57454904_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-3158-3pchr1957454900574549067mer-m85745489957454920148-17.09
ADediting_785321chr19_57454846_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-1207-3pchr1957454846574548527mer-m85745484557454863145-13.53
ADediting_785321chr19_57454846_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6081chr1957454841574548488mer-1a5745484157454865153-22.03
ADediting_785321chr19_57454846_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-646chr1957454844574548507mer-m85745484357454862148-20.6
ADediting_785322chr19_57454856_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-140-3pchr1957454854574548607mer-m85745485357454873156-24.44
ADediting_785324chr19_57454881_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-548schr1957454876574548838mer-1a5745487657454899141-10.5
ADediting_785325chr19_57454967_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-3622a-3pchr1957454963574549708mer-1a5745496357454984140-13.28
ADediting_785325chr19_57454967_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-3622b-3pchr1957454963574549708mer-1a5745496357454983145-16.97
ADediting_785325chr19_57454967_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-4649-3pchr1957454967574549737mer-m85745496657454986142-15.81
ADediting_785325chr19_57454967_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-544bchr1957454966574549727mer-m85745496557454989147-20.07
ADediting_785326chr19_57455009_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-8052chr1957455004574550107mer-1a5745500457455022140-24.15
ADediting_785327chr19_57455010_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-513a-5pchr1957455009574550157mer-m85745500857455025144-16.68
ADediting_785327chr19_57455010_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-638chr1957455004574550107mer-1a5745500457455028157-32.92
ADediting_785328chr19_57455018_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-4634chr1957455014574550207mer-m85745501357455036151-32.12

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1559307chr19_57454904_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6823-5pchr1957454899574549057mer-m85745489857454919142-17.79
ADediting_1559307chr19_57454904_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-9983-3pchr1957454904574549107mer-m85745490357454924142-8.88
ADediting_1559308chr19_57454968_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-1304-5pchr1957454967574549737mer-m85745496657454986146-18.63
ADediting_785323chr19_57454866_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-1227-3pchr1957454864574548718mer-1a5745486457454883140-11.31
ADediting_785323chr19_57454866_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-3064-3pchr1957454866574548727mer-m85745486557454886141-10.96
ADediting_785323chr19_57454866_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6867-5pchr1957454861574548677mer-m85745486057454882141-14.16
ADediting_785324chr19_57454881_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-4735-5pchr1957454880574548867mer-m85745487957454900140-4.28
ADediting_785325chr19_57454967_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-1304-5pchr1957454967574549737mer-m85745496657454986146-18.63
ADediting_785326chr19_57455009_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-10399-5pchr1957455008574550147mer-m85745500757455028144-10.39
ADediting_785326chr19_57455009_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-5089-5pchr1957455004574550107mer-m85745500357455025148-17.52
ADediting_785326chr19_57455009_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6504-3pchr1957455008574550147mer-m85745500757455028152-15.11
ADediting_785327chr19_57455010_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-10399-5pchr1957455008574550147mer-m85745500757455028144-10.39
ADediting_785327chr19_57455010_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6504-3pchr1957455008574550147mer-m85745500757455028152-15.11
ADediting_785327chr19_57455010_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-7151-3pchr1957455009574550168mer-1a5745500957455033145-18.74
ADediting_785328chr19_57455018_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6807-5pchr1957455018574550247mer-m85745501757455039148-25.16
ADediting_785329chr19_57455026_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-4252chr1957455021574550277mer-m85745502057455038150-19.86
ADediting_785329chr19_57455026_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6529-3pchr1957455025574550317mer-m85745502457455051145-17.54
ADediting_785329chr19_57455026_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6889-3pchr1957455025574550317mer-m85745502457455043150-18.77
ADediting_785330chr19_57455028_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6529-3pchr1957455025574550317mer-m85745502457455051145-17.54
ADediting_785330chr19_57455028_-ENSG00000178201.4ENST00000321039.4VN1R1-201hsa-miR-6889-3pchr1957455025574550317mer-m85745502457455043150-18.77

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for VN1R1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000321039.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_785321ENST00000321039.4chr19_57454846_-2297-758.10-758.10-808.90
ADediting_785322ENST00000321039.4chr19_57454856_-2287-757.80-758.10-808.90
ADediting_785323ENST00000321039.4chr19_57454866_-2277-763.50-758.10-808.90
ADediting_785324ENST00000321039.4chr19_57454881_-2262-757.80-758.10-808.90
ADediting_1559307ENST00000321039.4chr19_57454904_-2239-758.10-758.10-808.90
ADediting_785325ENST00000321039.4chr19_57454967_-2176-757.80-758.10-808.90
ADediting_1559308ENST00000321039.4chr19_57454968_-2175-757.80-758.10-808.90
ADediting_785326ENST00000321039.4chr19_57455009_-2134-758.10-758.10-808.90
ADediting_785327ENST00000321039.4chr19_57455010_-2133-758.20-758.10-808.90
ADediting_785328ENST00000321039.4chr19_57455018_-2125-757.70-758.10-808.90
ADediting_785329ENST00000321039.4chr19_57455026_-2117-757.40-758.10-808.90
ADediting_785330ENST00000321039.4chr19_57455028_-2115-762.90-758.10-808.90
ADediting_785331ENST00000321039.4chr19_57455738_-1405-759.80-758.10-808.90
ADediting_785332ENST00000321039.4chr19_57455747_-1396-760.70-758.10-808.90
ADediting_785333ENST00000321039.4chr19_57455799_-1344-758.10-758.10-808.90
ADediting_785334ENST00000321039.4chr19_57455884_-1259-757.20-758.10-808.90
ADediting_785335ENST00000321039.4chr19_57456616_-527-761.90-758.10-808.90
ADediting_785336ENST00000321039.4chr19_57456677_-466-759.40-758.10-808.90
ADediting_785337ENST00000321039.4chr19_57456719_-424-757.40-758.10-808.90
ADediting_785338ENST00000321039.4chr19_57456721_-422-758.10-758.10-808.90
ADediting_785339ENST00000321039.4chr19_57456724_-419-758.10-758.10-808.90
ADediting_785340ENST00000321039.4chr19_57456726_-417-760.10-758.10-808.90
ADediting_785341ENST00000321039.4chr19_57456729_-414-758.10-758.10-808.90
ADediting_785342ENST00000321039.4chr19_57456730_-413-762.20-758.10-808.90
ADediting_785343ENST00000321039.4chr19_57456731_-412-759.50-758.10-808.90
ADediting_785344ENST00000321039.4chr19_57456740_-403-761.00-758.10-808.90
ADediting_785345ENST00000321039.4chr19_57456743_-400-759.70-758.10-808.90
ADediting_785346ENST00000321039.4chr19_57456746_-397-758.40-758.10-808.90
ADediting_785347ENST00000321039.4chr19_57456761_-382-758.00-758.10-808.90
ADediting_785348ENST00000321039.4chr19_57456764_-379-757.20-758.10-808.90
ADediting_785349ENST00000321039.4chr19_57456766_-377-757.20-758.10-808.90
ADediting_785350ENST00000321039.4chr19_57456776_-367-757.70-758.10-808.90
ADediting_785351ENST00000321039.4chr19_57456777_-366-760.40-758.10-808.90
ADediting_785352ENST00000321039.4chr19_57456778_-365-760.60-758.10-808.90
ADediting_785353ENST00000321039.4chr19_57456779_-364-758.90-758.10-808.90
ADediting_785354ENST00000321039.4chr19_57456780_-363-758.10-758.10-808.90
ADediting_785355ENST00000321039.4chr19_57456784_-359-758.10-758.10-808.90
ADediting_785356ENST00000321039.4chr19_57456786_-357-758.10-758.10-808.90
ADediting_785357ENST00000321039.4chr19_57456787_-356-758.30-758.10-808.90
ADediting_785358ENST00000321039.4chr19_57456789_-354-759.40-758.10-808.90
ADediting_785359ENST00000321039.4chr19_57456790_-353-758.20-758.10-808.90
ADediting_1559309ENST00000321039.4chr19_57456791_-352-758.50-758.10-808.90
ADediting_785360ENST00000321039.4chr19_57456793_-350-761.60-758.10-808.90
ADediting_785361ENST00000321039.4chr19_57456794_-349-758.80-758.10-808.90
ADediting_785362ENST00000321039.4chr19_57456796_-347-758.00-758.10-808.90
ADediting_785363ENST00000321039.4chr19_57456800_-343-757.70-758.10-808.90
ADediting_785364ENST00000321039.4chr19_57456803_-340-758.70-758.10-808.90
ADediting_785365ENST00000321039.4chr19_57456804_-339-758.10-758.10-808.90
ADediting_785366ENST00000321039.4chr19_57456806_-337-758.90-758.10-808.90
ADediting_785367ENST00000321039.4chr19_57456817_-326-757.80-758.10-808.90
ADediting_785368ENST00000321039.4chr19_57456818_-325-758.40-758.10-808.90
ADediting_785369ENST00000321039.4chr19_57456820_-323-758.10-758.10-808.90
ADediting_785370ENST00000321039.4chr19_57456821_-322-760.70-758.10-808.90
ADediting_785371ENST00000321039.4chr19_57456822_-321-760.30-758.10-808.90
ADediting_785372ENST00000321039.4chr19_57456826_-317-758.00-758.10-808.90
ADediting_785373ENST00000321039.4chr19_57456833_-310-758.70-758.10-808.90
ADediting_1559310ENST00000321039.4chr19_57456834_-309-762.70-758.10-808.90
ADediting_785374ENST00000321039.4chr19_57456838_-305-758.10-758.10-808.90
ADediting_785375ENST00000321039.4chr19_57456839_-304-758.80-758.10-808.90
ADediting_785376ENST00000321039.4chr19_57456843_-300-763.00-758.10-808.90
ADediting_785377ENST00000321039.4chr19_57456848_-295-758.00-758.10-808.90
ADediting_785378ENST00000321039.4chr19_57456854_-289-760.50-758.10-808.90
ADediting_785379ENST00000321039.4chr19_57456869_-274-759.00-758.10-808.90
ADediting_785380ENST00000321039.4chr19_57456920_-223-758.10-758.10-808.90
ADediting_1559311ENST00000321039.4chr19_57456923_-220-757.70-758.10-808.90
ADediting_785381ENST00000321039.4chr19_57456930_-213-761.20-758.10-808.90
ADediting_785382ENST00000321039.4chr19_57456931_-212-758.10-758.10-808.90
ADediting_785383ENST00000321039.4chr19_57456970_-173-758.10-758.10-808.90
ADediting_785384ENST00000321039.4chr19_57456973_-170-758.40-758.10-808.90
ADediting_785385ENST00000321039.4chr19_57457021_-122-761.80-758.10-808.90
ADediting_785386ENST00000321039.4chr19_57457029_-114-757.40-758.10-808.90
ADediting_785387ENST00000321039.4chr19_57457033_-110-757.20-758.10-808.90
ADediting_785388ENST00000321039.4chr19_57457035_-108-757.70-758.10-808.90
ADediting_785389ENST00000321039.4chr19_57457038_-105-757.70-758.10-808.90
ADediting_785390ENST00000321039.4chr19_57457041_-102-755.10-758.10-808.90
ADediting_785391ENST00000321039.4chr19_57457044_-99-758.10-758.10-808.90
ADediting_785392ENST00000321039.4chr19_57457089_-54-759.30-758.10-808.90
ADediting_785393ENST00000321039.4chr19_57457092_-51-758.50-758.10-808.90
ADediting_785394ENST00000321039.4chr19_57457102_-41-757.80-758.10-808.90
ADediting_785395ENST00000321039.4chr19_57457127_-16-757.60-758.10-808.90
ADediting_785396ENST00000321039.4chr19_57457131_-12-757.80-758.10-808.90
ADediting_785397ENST00000321039.4chr19_57457132_-11-758.50-758.10-808.90
ADediting_785398ENST00000321039.4chr19_57457138_-5-757.30-758.10-808.90

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for VN1R1

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.39713737680184e-140.4185927251756181.1437981897563e-180.4727745063379363.61772912045339e-160.440790821515005
AC4.15809539240092e-420.7253785747171466.46110410240198e-310.6459587519344733.6950623888508e-140.454687375699789
PCC3.76353489731999e-160.5447162773192155.92761190560546e-160.5416345567605181.12152539189436e-060.343769653151528
CER3.53337539010761e-240.7086247100172621.26617288869293e-260.7337696277045820.0001101953680278130.310494349999602
TCX1.45375865434525e-140.574781452216991.17573683277264e-190.6538603383010750.1615544406154680.114880553292707
FP1.66406274862801e-250.6800258016984544.00659868423365e-190.6046229713414952.57292085691096e-070.374662049599151
IFG0.04256920297275730.4086014995322110.03002971282435060.4343741613019040.00146536130334690.601638706663585
PG6.51496419779387e-370.7643804567450671.04878658655231e-310.7257244059454910.8123071415033720.0175275528579632
STG1.7263998452417e-050.4502802341244751.47249853358685e-050.4535556351136420.02410830297640630.245975869124274

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Relation with AD stages for VN1R1

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER4.45579895017924e-070.463238032879617
TCX0.0005297608938987170.330960602891093
IFG0.005014898117307630.543196563198967

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RelatedDrugs for VN1R1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for VN1R1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource