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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TIGAR |
 Gene summary |
| Gene information | Gene symbol | TIGAR | Gene ID | 57103 |
| Gene name | TP53 induced glycolysis regulatory phosphatase | |
| Synonyms | C12orf5|FR2BP | |
| Cytomap | 12p13.32 | |
| Type of gene | protein-coding | |
| Description | fructose-2,6-bisphosphatase TIGARTP53-induced glycolysis and apoptosis regulatorfructose-2,6-bisphosphate 2-phosphataseprobable fructose-2,6-bisphosphatase TIGARtransactivated by NS3TP2 protein | |
| Modification date | 20200313 | |
| UniProtAcc | Q9NQ88, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| TIGAR | GO:0006003 | fructose 2,6-bisphosphate metabolic process | 19015259 |
| TIGAR | GO:0006974 | cellular response to DNA damage stimulus | 25928429 |
| TIGAR | GO:0030388 | fructose 1,6-bisphosphate metabolic process | 19015259 |
| TIGAR | GO:0043069 | negative regulation of programmed cell death | 23185017 |
| TIGAR | GO:0071279 | cellular response to cobalt ion | 25928429 |
| TIGAR | GO:0071456 | cellular response to hypoxia | 23185017 |
| TIGAR | GO:1903301 | positive regulation of hexokinase activity | 23185017 |
Top |
RNA A-to-I events for TIGAR |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_344621(4312583, +), ADediting_344622(4312621, +), ADediting_344623(4312729, +), ADediting_344624(4312781, +), ADediting_344625(4313393, +), ADediting_344626(4313414, +), ADediting_344627(4316105, +), ADediting_344628(4316131, +), ADediting_344629(4316132, +), ADediting_344630(4316135, +), ADediting_344631(4322097, +), ADediting_344632(4322126, +), ADediting_344633(4322210, +), ADediting_344634(4322271, +), ADediting_344635(4323011, +), ADediting_344636(4323034, +), ADediting_344637(4323065, +), ADediting_344638(4323119, +), ADediting_344639(4323155, +), ADediting_344640(4323176, +), ADediting_344641(4323204, +), ADediting_344642(4323208, +), ADediting_344643(4323220, +), ADediting_344644(4323250, +), ADediting_344645(4323251, +), ADediting_344646(4325020, +), ADediting_344647(4325023, +), ADediting_344648(4325072, +), ADediting_344649(4325540, +), ADediting_344650(4325545, +), ADediting_344651(4325554, +), ADediting_344652(4325565, +), ADediting_344653(4325621, +), ADediting_344654(4325622, +), ADediting_344655(4325683, +), ADediting_344656(4327137, +), ADediting_344657(4327140, +), ADediting_344658(4327147, +), ADediting_344659(4327151, +), ADediting_344660(4327153, +), ADediting_344661(4327206, +), ADediting_344662(4327244, +), ADediting_344663(4327247, +), ADediting_344664(4327248, +), ADediting_344665(4327259, +), ADediting_344666(4327262, +), ADediting_344667(4327267, +), ADediting_344668(4327288, +), ADediting_344669(4327289, +), ADediting_344670(4327312, +), ADediting_344671(4327329, +), ADediting_344672(4327354, +), ADediting_344673(4327366, +), ADediting_344674(4327747, +), ADediting_344675(4327767, +), ADediting_344676(4327768, +), ADediting_344677(4327785, +), ADediting_344678(4327807, +), ADediting_344679(4327823, +), ADediting_344680(4327851, +), ADediting_344681(4327865, +), ADediting_344682(4327868, +), ADediting_344683(4327870, +), ADediting_344684(4327928, +), ADediting_344685(4327940, +), ADediting_344686(4327946, +), ADediting_344687(4328248, +), ADediting_344688(4328253, +), ADediting_344689(4328292, +), ADediting_344690(4328375, +), ADediting_344691(4337241, +), ADediting_344692(4337247, +), ADediting_344693(4337266, +), ADediting_344694(4337284, +), ADediting_344695(4337327, +), ADediting_344696(4337349, +), ADediting_344697(4337380, +), ADediting_344698(4337388, +), ADediting_344699(4337389, +), ADediting_344700(4337394, +), ADediting_344701(4337399, +), ADediting_344702(4337412, +), ADediting_344703(4337421, +), ADediting_344704(4337422, +), ADediting_344705(4337857, +), ADediting_344706(4337898, +), ADediting_344707(4337902, +), ADediting_344708(4337929, +), ADediting_344709(4337966, +), ADediting_344710(4337972, +), ADediting_344711(4337973, +), ADediting_344712(4337975, +), ADediting_344713(4337978, +), ADediting_344714(4337980, +), ADediting_344715(4337981, +), ADediting_344716(4337984, +), ADediting_344717(4337988, +), ADediting_344718(4338009, +), ADediting_344719(4338055, +), ADediting_344721(4347864, +), ADediting_344722(4347904, +), ADediting_344723(4347911, +), ADediting_344724(4347954, +), ADediting_344725(4347985, +), ADediting_344726(4348015, +), ADediting_344727(4348025, +), ADediting_344728(4348051, +), ADediting_344729(4349487, +), ADediting_344730(4349521, +), ADediting_344731(4349522, +), ADediting_344732(4349557, +), ADediting_344733(4349669, +), ADediting_344734(4350790, +), ADediting_344735(4353565, +), ADediting_344736(4353582, +), ADediting_344737(4353625, +), ADediting_344738(4353634, +), ADediting_344739(4353671, +), ADediting_344740(4353700, +), ADediting_344741(4353713, +), ADediting_344742(4353714, +), ADediting_344743(4353740, +), ADediting_344744(4353755, +), ADediting_344745(4353809, +), ADediting_344746(4354788, +), ADediting_344747(4354796, +), ADediting_344748(4354806, +), ADediting_344749(4354812, +), ADediting_344750(4354831, +), ADediting_344751(4354832, +), ADediting_344752(4354835, +), ADediting_344753(4354849, +), ADediting_344754(4354861, +), ADediting_344755(4354871, +), ADediting_344756(4354914, +), ADediting_344757(4354940, +), ADediting_344758(4354974, +), ADediting_344759(4354992, +), ADediting_344760(4354993, +), ADediting_344761(4355011, +), ADediting_344762(4355014, +), ADediting_344763(4357871, +), ADediting_344764(4357879, +), ADediting_344765(4357920, +), ADediting_344766(4357983, +), ADediting_344767(4358054, +), ADediting_344768(4358188, +), ADediting_344769(4358211, +), ADediting_344770(4358220, +), ADediting_344771(4358235, +), ADediting_1613734(4334384, +), ADediting_1613735(4334404, +), |
Top |
RNA editing positional annotations for TIGAR using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_344621 | chr12_4312583_+ | intronic |
| ADediting_344622 | chr12_4312621_+ | intronic |
| ADediting_344623 | chr12_4312729_+ | intronic |
| ADediting_344624 | chr12_4312781_+ | intronic |
| ADediting_344625 | chr12_4313393_+ | intronic |
| ADediting_344626 | chr12_4313414_+ | intronic |
| ADediting_344627 | chr12_4316105_+ | intronic |
| ADediting_344628 | chr12_4316131_+ | intronic |
| ADediting_344629 | chr12_4316132_+ | intronic |
| ADediting_344630 | chr12_4316135_+ | intronic |
| ADediting_344631 | chr12_4322097_+ | intronic |
| ADediting_344632 | chr12_4322126_+ | intronic |
| ADediting_344633 | chr12_4322210_+ | intronic |
| ADediting_344634 | chr12_4322271_+ | intronic |
| ADediting_344635 | chr12_4323011_+ | intronic |
| ADediting_344636 | chr12_4323034_+ | intronic |
| ADediting_344637 | chr12_4323065_+ | intronic |
| ADediting_344638 | chr12_4323119_+ | intronic |
| ADediting_344639 | chr12_4323155_+ | intronic |
| ADediting_344640 | chr12_4323176_+ | intronic |
| ADediting_344641 | chr12_4323204_+ | intronic |
| ADediting_344642 | chr12_4323208_+ | intronic |
| ADediting_344643 | chr12_4323220_+ | intronic |
| ADediting_344644 | chr12_4323250_+ | intronic |
| ADediting_344645 | chr12_4323251_+ | intronic |
| ADediting_344646 | chr12_4325020_+ | intronic |
| ADediting_344647 | chr12_4325023_+ | intronic |
| ADediting_344648 | chr12_4325072_+ | intronic |
| ADediting_344649 | chr12_4325540_+ | intronic |
| ADediting_344650 | chr12_4325545_+ | intronic |
| ADediting_344651 | chr12_4325554_+ | intronic |
| ADediting_344652 | chr12_4325565_+ | intronic |
| ADediting_344653 | chr12_4325621_+ | intronic |
| ADediting_344654 | chr12_4325622_+ | intronic |
| ADediting_344655 | chr12_4325683_+ | intronic |
| ADediting_344656 | chr12_4327137_+ | intronic |
| ADediting_344657 | chr12_4327140_+ | intronic |
| ADediting_344658 | chr12_4327147_+ | intronic |
| ADediting_344659 | chr12_4327151_+ | intronic |
| ADediting_344660 | chr12_4327153_+ | intronic |
| ADediting_344661 | chr12_4327206_+ | intronic |
| ADediting_344662 | chr12_4327244_+ | intronic |
| ADediting_344663 | chr12_4327247_+ | intronic |
| ADediting_344664 | chr12_4327248_+ | intronic |
| ADediting_344665 | chr12_4327259_+ | intronic |
| ADediting_344666 | chr12_4327262_+ | intronic |
| ADediting_344667 | chr12_4327267_+ | intronic |
| ADediting_344668 | chr12_4327288_+ | intronic |
| ADediting_344669 | chr12_4327289_+ | intronic |
| ADediting_344670 | chr12_4327312_+ | intronic |
| ADediting_344671 | chr12_4327329_+ | intronic |
| ADediting_344672 | chr12_4327354_+ | intronic |
| ADediting_344673 | chr12_4327366_+ | intronic |
| ADediting_344674 | chr12_4327747_+ | intronic |
| ADediting_344675 | chr12_4327767_+ | intronic |
| ADediting_344676 | chr12_4327768_+ | intronic |
| ADediting_344677 | chr12_4327785_+ | intronic |
| ADediting_344678 | chr12_4327807_+ | intronic |
| ADediting_344679 | chr12_4327823_+ | intronic |
| ADediting_344680 | chr12_4327851_+ | intronic |
| ADediting_344681 | chr12_4327865_+ | intronic |
| ADediting_344682 | chr12_4327868_+ | intronic |
| ADediting_344683 | chr12_4327870_+ | intronic |
| ADediting_344684 | chr12_4327928_+ | intronic |
| ADediting_344685 | chr12_4327940_+ | intronic |
| ADediting_344686 | chr12_4327946_+ | intronic |
| ADediting_344687 | chr12_4328248_+ | intronic |
| ADediting_344688 | chr12_4328253_+ | intronic |
| ADediting_344689 | chr12_4328292_+ | intronic |
| ADediting_344690 | chr12_4328375_+ | intronic |
| ADediting_344691 | chr12_4337241_+ | intronic |
| ADediting_344692 | chr12_4337247_+ | intronic |
| ADediting_344693 | chr12_4337266_+ | intronic |
| ADediting_344694 | chr12_4337284_+ | intronic |
| ADediting_344695 | chr12_4337327_+ | intronic |
| ADediting_344696 | chr12_4337349_+ | intronic |
| ADediting_344697 | chr12_4337380_+ | intronic |
| ADediting_344698 | chr12_4337388_+ | intronic |
| ADediting_344699 | chr12_4337389_+ | intronic |
| ADediting_344700 | chr12_4337394_+ | intronic |
| ADediting_344701 | chr12_4337399_+ | intronic |
| ADediting_344702 | chr12_4337412_+ | intronic |
| ADediting_344703 | chr12_4337421_+ | intronic |
| ADediting_344704 | chr12_4337422_+ | intronic |
| ADediting_344705 | chr12_4337857_+ | intronic |
| ADediting_344706 | chr12_4337898_+ | intronic |
| ADediting_344707 | chr12_4337902_+ | intronic |
| ADediting_344708 | chr12_4337929_+ | intronic |
| ADediting_344709 | chr12_4337966_+ | intronic |
| ADediting_344710 | chr12_4337972_+ | intronic |
| ADediting_344711 | chr12_4337973_+ | intronic |
| ADediting_344712 | chr12_4337975_+ | intronic |
| ADediting_344713 | chr12_4337978_+ | intronic |
| ADediting_344714 | chr12_4337980_+ | intronic |
| ADediting_344715 | chr12_4337981_+ | intronic |
| ADediting_344716 | chr12_4337984_+ | intronic |
| ADediting_344717 | chr12_4337988_+ | intronic |
| ADediting_344718 | chr12_4338009_+ | intronic |
| ADediting_344719 | chr12_4338055_+ | intronic |
| ADediting_344721 | chr12_4347864_+ | intronic |
| ADediting_344722 | chr12_4347904_+ | intronic |
| ADediting_344723 | chr12_4347911_+ | intronic |
| ADediting_344724 | chr12_4347954_+ | intronic |
| ADediting_344725 | chr12_4347985_+ | intronic |
| ADediting_344726 | chr12_4348015_+ | intronic |
| ADediting_344727 | chr12_4348025_+ | intronic |
| ADediting_344728 | chr12_4348051_+ | intronic |
| ADediting_344729 | chr12_4349487_+ | intronic |
| ADediting_344730 | chr12_4349521_+ | intronic |
| ADediting_344731 | chr12_4349522_+ | intronic |
| ADediting_344732 | chr12_4349557_+ | intronic |
| ADediting_344733 | chr12_4349669_+ | intronic |
| ADediting_344734 | chr12_4350790_+ | intronic |
| ADediting_344735 | chr12_4353565_+ | UTR3 |
| ADediting_344736 | chr12_4353582_+ | UTR3 |
| ADediting_344737 | chr12_4353625_+ | UTR3 |
| ADediting_344738 | chr12_4353634_+ | UTR3 |
| ADediting_344739 | chr12_4353671_+ | UTR3 |
| ADediting_344740 | chr12_4353700_+ | UTR3 |
| ADediting_344741 | chr12_4353713_+ | UTR3 |
| ADediting_344742 | chr12_4353714_+ | UTR3 |
| ADediting_344743 | chr12_4353740_+ | UTR3 |
| ADediting_344744 | chr12_4353755_+ | UTR3 |
| ADediting_344745 | chr12_4353809_+ | UTR3 |
| ADediting_344746 | chr12_4354788_+ | UTR3 |
| ADediting_344747 | chr12_4354796_+ | UTR3 |
| ADediting_344748 | chr12_4354806_+ | UTR3 |
| ADediting_344749 | chr12_4354812_+ | UTR3 |
| ADediting_344750 | chr12_4354831_+ | UTR3 |
| ADediting_344751 | chr12_4354832_+ | UTR3 |
| ADediting_344752 | chr12_4354835_+ | UTR3 |
| ADediting_344753 | chr12_4354849_+ | UTR3 |
| ADediting_344754 | chr12_4354861_+ | UTR3 |
| ADediting_344755 | chr12_4354871_+ | UTR3 |
| ADediting_344756 | chr12_4354914_+ | UTR3 |
| ADediting_344757 | chr12_4354940_+ | UTR3 |
| ADediting_344758 | chr12_4354974_+ | UTR3 |
| ADediting_344759 | chr12_4354992_+ | UTR3 |
| ADediting_344760 | chr12_4354993_+ | UTR3 |
| ADediting_344761 | chr12_4355011_+ | UTR3 |
| ADediting_344762 | chr12_4355014_+ | UTR3 |
| ADediting_344763 | chr12_4357871_+ | UTR3 |
| ADediting_344764 | chr12_4357879_+ | UTR3 |
| ADediting_344765 | chr12_4357920_+ | UTR3 |
| ADediting_344766 | chr12_4357983_+ | UTR3 |
| ADediting_344767 | chr12_4358054_+ | UTR3 |
| ADediting_344768 | chr12_4358188_+ | UTR3 |
| ADediting_344769 | chr12_4358211_+ | UTR3 |
| ADediting_344770 | chr12_4358220_+ | UTR3 |
| ADediting_344771 | chr12_4358235_+ | UTR3 |
| ADediting_1613734 | chr12_4334384_+ | intronic |
| ADediting_1613735 | chr12_4334404_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_344621 | chr12_4312583_+ | SINE | Alu | Name=AluSz |
| ADediting_344622 | chr12_4312621_+ | SINE | Alu | Name=AluSz |
| ADediting_344623 | chr12_4312729_+ | SINE | Alu | Name=AluSz |
| ADediting_344624 | chr12_4312781_+ | SINE | Alu | Name=AluSz |
| ADediting_344625 | chr12_4313393_+ | SINE | Alu | Name=AluSx |
| ADediting_344626 | chr12_4313414_+ | SINE | Alu | Name=AluSx |
| ADediting_344627 | chr12_4316105_+ | SINE | Alu | Name=AluSq |
| ADediting_344628 | chr12_4316131_+ | SINE | Alu | Name=AluSq |
| ADediting_344629 | chr12_4316132_+ | SINE | Alu | Name=AluSq |
| ADediting_344630 | chr12_4316135_+ | SINE | Alu | Name=AluSq |
| ADediting_344631 | chr12_4322097_+ | SINE | Alu | Name=AluSz |
| ADediting_344632 | chr12_4322126_+ | SINE | Alu | Name=AluSz |
| ADediting_344633 | chr12_4322210_+ | SINE | Alu | Name=AluSz |
| ADediting_344634 | chr12_4322271_+ | SINE | Alu | Name=AluSz |
| ADediting_344635 | chr12_4323011_+ | SINE | Alu | Name=AluJb |
| ADediting_344636 | chr12_4323034_+ | SINE | Alu | Name=AluJb |
| ADediting_344637 | chr12_4323065_+ | SINE | Alu | Name=AluJb |
| ADediting_344638 | chr12_4323119_+ | SINE | Alu | Name=AluJb |
| ADediting_344639 | chr12_4323155_+ | SINE | Alu | Name=AluJb |
| ADediting_344640 | chr12_4323176_+ | SINE | Alu | Name=AluJb |
| ADediting_344641 | chr12_4323204_+ | SINE | Alu | Name=AluJb |
| ADediting_344642 | chr12_4323208_+ | SINE | Alu | Name=AluJb |
| ADediting_344643 | chr12_4323220_+ | SINE | Alu | Name=AluJb |
| ADediting_344644 | chr12_4323250_+ | SINE | Alu | Name=AluJb |
| ADediting_344645 | chr12_4323251_+ | SINE | Alu | Name=AluJb |
| ADediting_344646 | chr12_4325020_+ | SINE | Alu | Name=AluSp |
| ADediting_344647 | chr12_4325023_+ | SINE | Alu | Name=AluSp |
| ADediting_344648 | chr12_4325072_+ | SINE | Alu | Name=AluSp |
| ADediting_344649 | chr12_4325540_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344650 | chr12_4325545_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344651 | chr12_4325554_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344652 | chr12_4325565_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344653 | chr12_4325621_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344654 | chr12_4325622_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344655 | chr12_4325683_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344656 | chr12_4327137_+ | SINE | Alu | Name=AluSx |
| ADediting_344657 | chr12_4327140_+ | SINE | Alu | Name=AluSx |
| ADediting_344658 | chr12_4327147_+ | SINE | Alu | Name=AluSx |
| ADediting_344659 | chr12_4327151_+ | SINE | Alu | Name=AluSx |
| ADediting_344660 | chr12_4327153_+ | SINE | Alu | Name=AluSx |
| ADediting_344661 | chr12_4327206_+ | SINE | Alu | Name=AluSx |
| ADediting_344662 | chr12_4327244_+ | SINE | Alu | Name=AluSx |
| ADediting_344663 | chr12_4327247_+ | SINE | Alu | Name=AluSx |
| ADediting_344664 | chr12_4327248_+ | SINE | Alu | Name=AluSx |
| ADediting_344665 | chr12_4327259_+ | SINE | Alu | Name=AluSx |
| ADediting_344666 | chr12_4327262_+ | SINE | Alu | Name=AluSx |
| ADediting_344667 | chr12_4327267_+ | SINE | Alu | Name=AluSx |
| ADediting_344668 | chr12_4327288_+ | SINE | Alu | Name=AluSx |
| ADediting_344669 | chr12_4327289_+ | SINE | Alu | Name=AluSx |
| ADediting_344670 | chr12_4327312_+ | SINE | Alu | Name=AluSx |
| ADediting_344671 | chr12_4327329_+ | SINE | Alu | Name=AluSx |
| ADediting_344672 | chr12_4327354_+ | SINE | Alu | Name=AluSx |
| ADediting_344673 | chr12_4327366_+ | SINE | Alu | Name=AluSx |
| ADediting_344674 | chr12_4327747_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344675 | chr12_4327767_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344676 | chr12_4327768_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344677 | chr12_4327785_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344678 | chr12_4327807_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344679 | chr12_4327823_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344680 | chr12_4327851_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344681 | chr12_4327865_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344682 | chr12_4327868_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344683 | chr12_4327870_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344684 | chr12_4327928_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344685 | chr12_4327940_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344686 | chr12_4327946_+ | SINE | Alu | Name=AluSx4 |
| ADediting_344687 | chr12_4328248_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344688 | chr12_4328253_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344689 | chr12_4328292_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344690 | chr12_4328375_+ | SINE | Alu | Name=AluSq2 |
| ADediting_344691 | chr12_4337241_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344692 | chr12_4337247_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344693 | chr12_4337266_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344694 | chr12_4337284_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344695 | chr12_4337327_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344696 | chr12_4337349_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344697 | chr12_4337380_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344698 | chr12_4337388_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344699 | chr12_4337389_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344700 | chr12_4337394_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344701 | chr12_4337399_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344702 | chr12_4337412_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344703 | chr12_4337421_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344704 | chr12_4337422_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344705 | chr12_4337857_+ | SINE | Alu | Name=AluSz |
| ADediting_344706 | chr12_4337898_+ | SINE | Alu | Name=AluSz |
| ADediting_344707 | chr12_4337902_+ | SINE | Alu | Name=AluSz |
| ADediting_344708 | chr12_4337929_+ | SINE | Alu | Name=AluSz |
| ADediting_344709 | chr12_4337966_+ | SINE | Alu | Name=AluSz |
| ADediting_344710 | chr12_4337972_+ | SINE | Alu | Name=AluSz |
| ADediting_344711 | chr12_4337973_+ | SINE | Alu | Name=AluSz |
| ADediting_344712 | chr12_4337975_+ | SINE | Alu | Name=AluSz |
| ADediting_344713 | chr12_4337978_+ | SINE | Alu | Name=AluSz |
| ADediting_344714 | chr12_4337980_+ | SINE | Alu | Name=AluSz |
| ADediting_344715 | chr12_4337981_+ | SINE | Alu | Name=AluSz |
| ADediting_344716 | chr12_4337984_+ | SINE | Alu | Name=AluSz |
| ADediting_344717 | chr12_4337988_+ | SINE | Alu | Name=AluSz |
| ADediting_344718 | chr12_4338009_+ | SINE | Alu | Name=AluSz |
| ADediting_344719 | chr12_4338055_+ | SINE | Alu | Name=AluSz |
| ADediting_344721 | chr12_4347864_+ | SINE | Alu | Name=AluJb |
| ADediting_344722 | chr12_4347904_+ | SINE | Alu | Name=AluJb |
| ADediting_344723 | chr12_4347911_+ | SINE | Alu | Name=AluJb |
| ADediting_344724 | chr12_4347954_+ | SINE | Alu | Name=AluJb |
| ADediting_344725 | chr12_4347985_+ | SINE | Alu | Name=AluJb |
| ADediting_344726 | chr12_4348015_+ | SINE | Alu | Name=AluJb |
| ADediting_344727 | chr12_4348025_+ | SINE | Alu | Name=AluJb |
| ADediting_344728 | chr12_4348051_+ | SINE | Alu | Name=AluJb |
| ADediting_344729 | chr12_4349487_+ | SINE | Alu | Name=AluSc8 |
| ADediting_344730 | chr12_4349521_+ | SINE | Alu | Name=AluSc8 |
| ADediting_344731 | chr12_4349522_+ | SINE | Alu | Name=AluSc8 |
| ADediting_344732 | chr12_4349557_+ | SINE | Alu | Name=AluSc8 |
| ADediting_344733 | chr12_4349669_+ | SINE | Alu | Name=AluSc8 |
| ADediting_344734 | chr12_4350790_+ | SINE | Alu | Name=AluSc8 |
| ADediting_344735 | chr12_4353565_+ | SINE | Alu | Name=AluSg |
| ADediting_344736 | chr12_4353582_+ | SINE | Alu | Name=AluSg |
| ADediting_344737 | chr12_4353625_+ | SINE | Alu | Name=AluSg |
| ADediting_344738 | chr12_4353634_+ | SINE | Alu | Name=AluSg |
| ADediting_344739 | chr12_4353671_+ | SINE | Alu | Name=AluSg |
| ADediting_344740 | chr12_4353700_+ | SINE | Alu | Name=AluSg |
| ADediting_344741 | chr12_4353713_+ | SINE | Alu | Name=AluSg |
| ADediting_344742 | chr12_4353714_+ | SINE | Alu | Name=AluSg |
| ADediting_344743 | chr12_4353740_+ | SINE | Alu | Name=AluSg |
| ADediting_344744 | chr12_4353755_+ | SINE | Alu | Name=AluSg |
| ADediting_344745 | chr12_4353809_+ | SINE | Alu | Name=AluSg |
| ADediting_344746 | chr12_4354788_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344747 | chr12_4354796_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344748 | chr12_4354806_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344749 | chr12_4354812_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344750 | chr12_4354831_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344751 | chr12_4354832_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344752 | chr12_4354835_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344753 | chr12_4354849_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344754 | chr12_4354861_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344755 | chr12_4354871_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344756 | chr12_4354914_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344757 | chr12_4354940_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344758 | chr12_4354974_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344759 | chr12_4354992_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344760 | chr12_4354993_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344761 | chr12_4355011_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344762 | chr12_4355014_+ | SINE | Alu | Name=AluSz6 |
| ADediting_344763 | chr12_4357871_+ | SINE | Alu | Name=AluY |
| ADediting_344764 | chr12_4357879_+ | SINE | Alu | Name=AluY |
| ADediting_344765 | chr12_4357920_+ | SINE | Alu | Name=AluY |
| ADediting_344766 | chr12_4357983_+ | SINE | Alu | Name=AluY |
| ADediting_344767 | chr12_4358054_+ | SINE | Alu | Name=AluY |
| ADediting_344768 | chr12_4358188_+ | SINE | Alu | Name=AluSx |
| ADediting_344769 | chr12_4358211_+ | SINE | Alu | Name=AluSx |
| ADediting_344770 | chr12_4358220_+ | SINE | Alu | Name=AluSx |
| ADediting_344771 | chr12_4358235_+ | SINE | Alu | Name=AluSx |
| ADediting_1613734 | chr12_4334384_+ | LTR | ERVL-MaLR | Name=MLT1A0 |
| ADediting_1613735 | chr12_4334404_+ | LTR | ERVL-MaLR | Name=MLT1A0 |
Top |
RNA A-to-I editing events in the alternative splicing sites for TIGAR |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for TIGAR |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TIGAR |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for TIGAR |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-181d-3p | chr12 | 4353561 | 4353567 | 7mer-m8 | 4353548 | 4353568 | 140 | -22.36 |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-181d-3p | chr12 | 4353561 | 4353567 | 7mer-m8 | 4353548 | 4353568 | 140 | -22.36 |
| ADediting_344738 | chr12_4353634_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-198 | chr12 | 4353630 | 4353636 | 7mer-m8 | 4353616 | 4353637 | 141 | -18.93 |
| ADediting_344738 | chr12_4353634_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-198 | chr12 | 4353630 | 4353636 | 7mer-m8 | 4353616 | 4353637 | 141 | -18.93 |
| ADediting_344740 | chr12_4353700_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4715-3p | chr12 | 4353696 | 4353702 | 7mer-m8 | 4353681 | 4353703 | 147 | -17.52 |
| ADediting_344740 | chr12_4353700_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4722-3p | chr12 | 4353698 | 4353704 | 7mer-m8 | 4353686 | 4353705 | 156 | -25.34 |
| ADediting_344740 | chr12_4353700_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6727-3p | chr12 | 4353698 | 4353704 | 7mer-m8 | 4353686 | 4353705 | 157 | -23.87 |
| ADediting_344740 | chr12_4353700_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-4715-3p | chr12 | 4353696 | 4353702 | 7mer-m8 | 4353681 | 4353703 | 147 | -17.52 |
| ADediting_344740 | chr12_4353700_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-4722-3p | chr12 | 4353698 | 4353704 | 7mer-m8 | 4353686 | 4353705 | 156 | -25.34 |
| ADediting_344740 | chr12_4353700_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6727-3p | chr12 | 4353698 | 4353704 | 7mer-m8 | 4353686 | 4353705 | 157 | -23.87 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-513a-5p | chr12 | 4353707 | 4353713 | 7mer-m8 | 4353697 | 4353714 | 140 | -14.36 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-638 | chr12 | 4353712 | 4353718 | 7mer-1a | 4353694 | 4353718 | 154 | -32.42 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-513a-5p | chr12 | 4353707 | 4353713 | 7mer-m8 | 4353697 | 4353714 | 140 | -14.36 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-638 | chr12 | 4353712 | 4353718 | 7mer-1a | 4353694 | 4353718 | 154 | -32.42 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-8052 | chr12 | 4353712 | 4353718 | 7mer-1a | 4353698 | 4353718 | 145 | -22.32 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-8052 | chr12 | 4353712 | 4353718 | 7mer-1a | 4353698 | 4353718 | 145 | -22.32 |
| ADediting_344744 | chr12_4353755_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4437 | chr12 | 4353751 | 4353757 | 7mer-m8 | 4353738 | 4353758 | 146 | -19.53 |
| ADediting_344744 | chr12_4353755_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-4437 | chr12 | 4353751 | 4353757 | 7mer-m8 | 4353738 | 4353758 | 146 | -19.53 |
| ADediting_344745 | chr12_4353809_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-500b-3p | chr12 | 4353806 | 4353813 | 8mer-1a | 4353795 | 4353813 | 155 | -22.56 |
| ADediting_344745 | chr12_4353809_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-500b-3p | chr12 | 4353806 | 4353813 | 8mer-1a | 4353795 | 4353813 | 155 | -22.56 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-324-3p | chr12 | 4354784 | 4354790 | 7mer-m8 | 4354769 | 4354791 | 156 | -26.93 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4252 | chr12 | 4354785 | 4354791 | 7mer-m8 | 4354772 | 4354792 | 146 | -20.82 |
| ADediting_344749 | chr12_4354812_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-17-3p | chr12 | 4354805 | 4354811 | 7mer-m8 | 4354792 | 4354812 | 153 | -18.02 |
| ADediting_344749 | chr12_4354812_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-485-5p | chr12 | 4354809 | 4354815 | 7mer-m8 | 4354796 | 4354816 | 153 | -17.86 |
| ADediting_344749 | chr12_4354812_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6884-5p | chr12 | 4354809 | 4354815 | 7mer-m8 | 4354794 | 4354816 | 146 | -20.16 |
| ADediting_344753 | chr12_4354849_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6089 | chr12 | 4354847 | 4354853 | 7mer-m8 | 4354831 | 4354854 | 153 | -31.53 |
| ADediting_344754 | chr12_4354861_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4691-3p | chr12 | 4354858 | 4354864 | 7mer-m8 | 4354839 | 4354865 | 153 | -28.71 |
| ADediting_344755 | chr12_4354871_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-17-3p | chr12 | 4354867 | 4354873 | 7mer-m8 | 4354852 | 4354874 | 150 | -22.27 |
| ADediting_344757 | chr12_4354940_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3940-3p | chr12 | 4354937 | 4354943 | 7mer-m8 | 4354926 | 4354944 | 144 | -24.53 |
| ADediting_344758 | chr12_4354974_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3937 | chr12 | 4354971 | 4354977 | 7mer-m8 | 4354959 | 4354978 | 144 | -23.68 |
| ADediting_344759 | chr12_4354992_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-1299 | chr12 | 4354986 | 4354992 | 7mer-m8 | 4354972 | 4354993 | 152 | -17.3 |
| ADediting_344759 | chr12_4354992_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-514a-5p | chr12 | 4354988 | 4354994 | 7mer-m8 | 4354975 | 4354995 | 154 | -17.61 |
| ADediting_344759 | chr12_4354992_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-518c-5p | chr12 | 4354987 | 4354993 | 7mer-m8 | 4354969 | 4354994 | 154 | -21.04 |
| ADediting_344760 | chr12_4354993_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6813-3p | chr12 | 4354988 | 4354994 | 7mer-m8 | 4354975 | 4354995 | 140 | -12.94 |
| ADediting_344763 | chr12_4357871_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3176 | chr12 | 4357864 | 4357870 | 7mer-m8 | 4357853 | 4357871 | 140 | -15.24 |
| ADediting_344763 | chr12_4357871_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3922-3p | chr12 | 4357864 | 4357870 | 7mer-m8 | 4357850 | 4357871 | 141 | -19.73 |
| ADediting_344766 | chr12_4357983_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-140-3p | chr12 | 4357978 | 4357984 | 7mer-m8 | 4357965 | 4357985 | 152 | -22.25 |
| ADediting_344767 | chr12_4358054_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-149-5p | chr12 | 4358047 | 4358053 | 7mer-m8 | 4358029 | 4358054 | 155 | -28.43 |
| ADediting_344767 | chr12_4358054_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4725-5p | chr12 | 4358051 | 4358057 | 7mer-m8 | 4358038 | 4358058 | 143 | -14.17 |
| ADediting_344767 | chr12_4358054_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-504-5p | chr12 | 4358051 | 4358057 | 7mer-m8 | 4358032 | 4358058 | 162 | -31.5 |
| ADediting_344768 | chr12_4358188_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3176 | chr12 | 4358181 | 4358187 | 7mer-m8 | 4358170 | 4358188 | 140 | -15.24 |
| ADediting_344768 | chr12_4358188_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3620-3p | chr12 | 4358185 | 4358191 | 7mer-m8 | 4358170 | 4358192 | 156 | -24.24 |
| ADediting_344768 | chr12_4358188_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3922-3p | chr12 | 4358181 | 4358187 | 7mer-m8 | 4358167 | 4358188 | 141 | -19.73 |
| ADediting_344770 | chr12_4358220_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-12113 | chr12 | 4358213 | 4358219 | 7mer-m8 | 4358200 | 4358220 | 147 | -19.86 |
| ADediting_344770 | chr12_4358220_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4539 | chr12 | 4358213 | 4358219 | 7mer-m8 | 4358201 | 4358220 | 151 | -20 |
| ADediting_344771 | chr12_4358235_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3190-5p | chr12 | 4358228 | 4358234 | 7mer-m8 | 4358216 | 4358235 | 152 | -19.64 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4252 | chr12 | 4353563 | 4353569 | 7mer-m8 | 4353552 | 4353570 | 150 | -23.24 |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6724-5p | chr12 | 4353558 | 4353564 | 7mer-m8 | 4353542 | 4353565 | 150 | -30.21 |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6773-5p | chr12 | 4353558 | 4353564 | 7mer-m8 | 4353543 | 4353565 | 144 | -24.47 |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-4252 | chr12 | 4353563 | 4353569 | 7mer-m8 | 4353552 | 4353570 | 150 | -23.24 |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6724-5p | chr12 | 4353558 | 4353564 | 7mer-m8 | 4353542 | 4353565 | 150 | -30.21 |
| ADediting_344735 | chr12_4353565_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6773-5p | chr12 | 4353558 | 4353564 | 7mer-m8 | 4353543 | 4353565 | 144 | -24.47 |
| ADediting_344736 | chr12_4353582_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-10399-5p | chr12 | 4353576 | 4353582 | 7mer-m8 | 4353562 | 4353583 | 148 | -10 |
| ADediting_344736 | chr12_4353582_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5089-5p | chr12 | 4353580 | 4353586 | 7mer-m8 | 4353565 | 4353587 | 148 | -13.62 |
| ADediting_344736 | chr12_4353582_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6504-3p | chr12 | 4353576 | 4353582 | 7mer-m8 | 4353562 | 4353583 | 149 | -15.11 |
| ADediting_344736 | chr12_4353582_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-10399-5p | chr12 | 4353576 | 4353582 | 7mer-m8 | 4353562 | 4353583 | 148 | -10 |
| ADediting_344736 | chr12_4353582_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-5089-5p | chr12 | 4353580 | 4353586 | 7mer-m8 | 4353565 | 4353587 | 148 | -13.62 |
| ADediting_344736 | chr12_4353582_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6504-3p | chr12 | 4353576 | 4353582 | 7mer-m8 | 4353562 | 4353583 | 149 | -15.11 |
| ADediting_344737 | chr12_4353625_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-378a-5p | chr12 | 4353621 | 4353628 | 8mer-1a | 4353606 | 4353628 | 148 | -19.28 |
| ADediting_344737 | chr12_4353625_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-378a-5p | chr12 | 4353621 | 4353628 | 8mer-1a | 4353606 | 4353628 | 148 | -19.28 |
| ADediting_344739 | chr12_4353671_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6832-5p | chr12 | 4353665 | 4353671 | 7mer-m8 | 4353650 | 4353672 | 140 | -18.87 |
| ADediting_344739 | chr12_4353671_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6832-5p | chr12 | 4353665 | 4353671 | 7mer-m8 | 4353650 | 4353672 | 140 | -18.87 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-10399-5p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 145 | -11.92 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6504-3p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 140 | -11.31 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-7151-3p | chr12 | 4353706 | 4353713 | 8mer-1a | 4353693 | 4353713 | 140 | -12.37 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-10399-5p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 145 | -11.92 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6504-3p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 140 | -11.31 |
| ADediting_344741 | chr12_4353713_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-7151-3p | chr12 | 4353706 | 4353713 | 8mer-1a | 4353693 | 4353713 | 140 | -12.37 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-10399-5p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 145 | -11.92 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5089-5p | chr12 | 4353712 | 4353718 | 7mer-m8 | 4353699 | 4353719 | 144 | -13.5 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6504-3p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 140 | -11.31 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-10399-5p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 145 | -11.92 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-5089-5p | chr12 | 4353712 | 4353718 | 7mer-m8 | 4353699 | 4353719 | 144 | -13.5 |
| ADediting_344742 | chr12_4353714_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6504-3p | chr12 | 4353708 | 4353714 | 7mer-m8 | 4353696 | 4353715 | 140 | -11.31 |
| ADediting_344743 | chr12_4353740_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-1976 | chr12 | 4353737 | 4353744 | 8mer-1a | 4353724 | 4353744 | 149 | -21.88 |
| ADediting_344743 | chr12_4353740_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6747-3p | chr12 | 4353735 | 4353742 | 8mer-1a | 4353721 | 4353742 | 150 | -24.42 |
| ADediting_344743 | chr12_4353740_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-1976 | chr12 | 4353737 | 4353744 | 8mer-1a | 4353724 | 4353744 | 149 | -21.88 |
| ADediting_344743 | chr12_4353740_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-6747-3p | chr12 | 4353735 | 4353742 | 8mer-1a | 4353721 | 4353742 | 150 | -24.42 |
| ADediting_344744 | chr12_4353755_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-498-5p | chr12 | 4353748 | 4353754 | 7mer-m8 | 4353733 | 4353755 | 142 | -9.71 |
| ADediting_344744 | chr12_4353755_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-498-5p | chr12 | 4353748 | 4353754 | 7mer-m8 | 4353733 | 4353755 | 142 | -9.71 |
| ADediting_344745 | chr12_4353809_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-645 | chr12 | 4353803 | 4353809 | 7mer-m8 | 4353793 | 4353810 | 153 | -20.7 |
| ADediting_344745 | chr12_4353809_+ | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-645 | chr12 | 4353803 | 4353809 | 7mer-m8 | 4353793 | 4353810 | 153 | -20.7 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-25-3p | chr12 | 4354782 | 4354788 | 7mer-m8 | 4354766 | 4354789 | 153 | -25.3 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-32-5p | chr12 | 4354782 | 4354788 | 7mer-m8 | 4354768 | 4354789 | 144 | -14.72 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-363-3p | chr12 | 4354782 | 4354788 | 7mer-m8 | 4354768 | 4354789 | 147 | -16.16 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-92a-3p | chr12 | 4354782 | 4354788 | 7mer-m8 | 4354772 | 4354789 | 155 | -28.32 |
| ADediting_344746 | chr12_4354788_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-92b-3p | chr12 | 4354782 | 4354788 | 7mer-m8 | 4354772 | 4354789 | 155 | -25.05 |
| ADediting_344748 | chr12_4354806_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6807-5p | chr12 | 4354799 | 4354805 | 7mer-m8 | 4354785 | 4354806 | 144 | -19.38 |
| ADediting_344749 | chr12_4354812_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-377-5p | chr12 | 4354809 | 4354815 | 7mer-m8 | 4354795 | 4354816 | 155 | -17.55 |
| ADediting_344749 | chr12_4354812_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6086 | chr12 | 4354809 | 4354815 | 7mer-m8 | 4354797 | 4354816 | 148 | -21.93 |
| ADediting_344749 | chr12_4354812_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6516-5p | chr12 | 4354805 | 4354811 | 7mer-m8 | 4354789 | 4354812 | 145 | -14.71 |
| ADediting_344752 | chr12_4354835_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-219b-3p | chr12 | 4354832 | 4354838 | 7mer-m8 | 4354819 | 4354839 | 153 | -15.53 |
| ADediting_344752 | chr12_4354835_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-302f | chr12 | 4354831 | 4354837 | 7mer-m8 | 4354822 | 4354838 | 145 | -8.14 |
| ADediting_344753 | chr12_4354849_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3929 | chr12 | 4354846 | 4354852 | 7mer-m8 | 4354832 | 4354853 | 148 | -17.12 |
| ADediting_344753 | chr12_4354849_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4478 | chr12 | 4354846 | 4354852 | 7mer-m8 | 4354836 | 4354853 | 146 | -20.98 |
| ADediting_344753 | chr12_4354849_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4649-3p | chr12 | 4354843 | 4354849 | 7mer-m8 | 4354830 | 4354850 | 140 | -12.74 |
| ADediting_344753 | chr12_4354849_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6884-5p | chr12 | 4354847 | 4354853 | 7mer-m8 | 4354833 | 4354854 | 150 | -19.28 |
| ADediting_344753 | chr12_4354849_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-7160-5p | chr12 | 4354844 | 4354850 | 7mer-m8 | 4354831 | 4354851 | 151 | -21.55 |
| ADediting_344754 | chr12_4354861_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5690 | chr12 | 4354858 | 4354864 | 7mer-m8 | 4354845 | 4354865 | 145 | -17.72 |
| ADediting_344755 | chr12_4354871_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-20b-3p | chr12 | 4354867 | 4354873 | 7mer-m8 | 4354852 | 4354874 | 153 | -18.04 |
| ADediting_344756 | chr12_4354914_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4684-5p | chr12 | 4354911 | 4354917 | 7mer-m8 | 4354897 | 4354918 | 152 | -12.03 |
| ADediting_344757 | chr12_4354940_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3190-5p | chr12 | 4354934 | 4354940 | 7mer-m8 | 4354922 | 4354941 | 146 | -20.24 |
| ADediting_344757 | chr12_4354940_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-548s | chr12 | 4354933 | 4354939 | 7mer-m8 | 4354918 | 4354940 | 146 | -14.51 |
| ADediting_344758 | chr12_4354974_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-12114 | chr12 | 4354970 | 4354976 | 7mer-m8 | 4354958 | 4354977 | 152 | -28.83 |
| ADediting_344758 | chr12_4354974_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3165 | chr12 | 4354969 | 4354975 | 7mer-m8 | 4354957 | 4354976 | 145 | -17.91 |
| ADediting_344758 | chr12_4354974_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-3665 | chr12 | 4354972 | 4354978 | 7mer-m8 | 4354962 | 4354979 | 140 | -17.7 |
| ADediting_344761 | chr12_4355011_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4633-5p | chr12 | 4355006 | 4355013 | 8mer-1a | 4354995 | 4355013 | 151 | -16.16 |
| ADediting_344761 | chr12_4355011_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6894-3p | chr12 | 4355004 | 4355010 | 7mer-m8 | 4354991 | 4355011 | 146 | -19 |
| ADediting_344765 | chr12_4357920_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-892a | chr12 | 4357915 | 4357921 | 7mer-m8 | 4357902 | 4357922 | 140 | -15.2 |
| ADediting_344766 | chr12_4357983_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-7151-3p | chr12 | 4357976 | 4357982 | 7mer-m8 | 4357959 | 4357983 | 145 | -24.14 |
| ADediting_344767 | chr12_4358054_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-6813-3p | chr12 | 4358050 | 4358056 | 7mer-m8 | 4358036 | 4358057 | 148 | -15.17 |
| ADediting_344771 | chr12_4358235_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4716-5p | chr12 | 4358233 | 4358239 | 7mer-m8 | 4358219 | 4358240 | 140 | -11.3 |
| ADediting_344771 | chr12_4358235_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4781-3p | chr12 | 4358231 | 4358237 | 7mer-m8 | 4358220 | 4358238 | 144 | -13.86 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-589-3p | chr12 | 4353547 | 4353553 | 7mer-m8 | 4353531 | 4353554 | 140 | -16.37 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-589-3p | chr12 | 4353833 | 4353839 | 7mer-m8 | 4353816 | 4353840 | 148 | -21.67 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-589-3p | chr12 | 4353879 | 4353886 | 8mer-1a | 4353862 | 4353886 | 156 | -24.59 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-589-3p | chr12 | 4355869 | 4355875 | 7mer-m8 | 4355856 | 4355876 | 142 | -15.09 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-589-3p | chr12 | 4353547 | 4353553 | 7mer-m8 | 4353531 | 4353554 | 140 | -16.37 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-589-3p | chr12 | 4353833 | 4353839 | 7mer-m8 | 4353816 | 4353840 | 148 | -21.67 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-589-3p | chr12 | 4353879 | 4353886 | 8mer-1a | 4353862 | 4353886 | 156 | -24.59 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-381-3p | chr12 | 4357208 | 4357214 | 7mer-m8 | 4357194 | 4357215 | 140 | -12.36 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-641 | chr12 | 4358803 | 4358809 | 7mer-m8 | 4358785 | 4358810 | 156 | -15.77 |
| ADediting_286380 | chr11_79422188_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5579-3p | chr12 | 4355011 | 4355017 | 7mer-m8 | 4354993 | 4355018 | 149 | -16.15 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4775 | chr12 | 4358117 | 4358123 | 7mer-m8 | 4358103 | 4358124 | 162 | -6.65 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4775 | chr12 | 4358310 | 4358316 | 7mer-m8 | 4358296 | 4358317 | 158 | -7.61 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5585-3p | chr12 | 4356900 | 4356906 | 7mer-m8 | 4356877 | 4356907 | 141 | -21.88 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5581-3p | chr12 | 4355888 | 4355895 | 8mer-1a | 4355872 | 4355895 | 152 | -23.77 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5688 | chr12 | 4359586 | 4359592 | 7mer-m8 | 4359572 | 4359593 | 147 | -9.4 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-589-3p | chr12 | 4359329 | 4359335 | 7mer-m8 | 4359311 | 4359336 | 152 | -20.23 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-337-3p | chr12 | 4356131 | 4356137 | 7mer-m8 | 4356117 | 4356138 | 155 | -18.41 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-641 | chr12 | 4355152 | 4355158 | 7mer-m8 | 4355138 | 4355159 | 147 | -12.84 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-641 | chr12 | 4355152 | 4355158 | 7mer-m8 | 4355138 | 4355159 | 147 | -12.84 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5682 | chr12 | 4356126 | 4356132 | 7mer-m8 | 4356110 | 4356133 | 149 | -18.83 |
| ADediting_291761 | chr11_93733708_- | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-1304-3p | chr12 | 4354449 | 4354455 | 7mer-m8 | 4354435 | 4354456 | 151 | -21.69 |
| ADediting_291761 | chr11_93733708_- | ENSG00000078237.7 | ENST00000635110.1 | TIGAR-204 | hsa-miR-1304-3p | chr12 | 4354449 | 4354455 | 7mer-m8 | 4354435 | 4354456 | 151 | -21.69 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-4775 | chr12 | 4359546 | 4359552 | 7mer-m8 | 4359532 | 4359553 | 150 | -10.37 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5585-3p | chr12 | 4355578 | 4355585 | 8mer-1a | 4355564 | 4355585 | 149 | -10.53 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5585-3p | chr12 | 4356950 | 4356956 | 7mer-m8 | 4356935 | 4356957 | 147 | -14.45 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5585-3p | chr12 | 4355578 | 4355585 | 8mer-1a | 4355564 | 4355585 | 149 | -10.53 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000078237.7 | ENST00000179259.6 | TIGAR-201 | hsa-miR-5585-3p | chr12 | 4356950 | 4356956 | 7mer-m8 | 4356935 | 4356957 | 147 | -14.45 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for TIGAR |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000635110.1 | protein_coding |  |  |
| ENST00000179259.6 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_344735 | ENST00000635110.1 | chr12_4353565_+ | 2649 | -1072.80 | -1073.50 | -1083.90 |
| ADediting_344736 | ENST00000635110.1 | chr12_4353582_+ | 2666 | -1074.30 | -1073.50 | -1083.90 |
| ADediting_344737 | ENST00000635110.1 | chr12_4353625_+ | 2709 | -1072.80 | -1073.50 | -1083.90 |
| ADediting_344738 | ENST00000635110.1 | chr12_4353634_+ | 2718 | -1075.20 | -1073.50 | -1083.90 |
| ADediting_344739 | ENST00000635110.1 | chr12_4353671_+ | 2755 | -1075.80 | -1073.50 | -1083.90 |
| ADediting_344740 | ENST00000635110.1 | chr12_4353700_+ | 2784 | -1077.70 | -1073.50 | -1083.90 |
| ADediting_344741 | ENST00000635110.1 | chr12_4353713_+ | 2797 | -1074.00 | -1073.50 | -1083.90 |
| ADediting_344742 | ENST00000635110.1 | chr12_4353714_+ | 2798 | -1073.50 | -1073.50 | -1083.90 |
| ADediting_344743 | ENST00000635110.1 | chr12_4353740_+ | 2824 | -1077.80 | -1073.50 | -1083.90 |
| ADediting_344744 | ENST00000635110.1 | chr12_4353755_+ | 2839 | -1077.00 | -1073.50 | -1083.90 |
| ADediting_344745 | ENST00000635110.1 | chr12_4353809_+ | 2893 | -1074.50 | -1073.50 | -1083.90 |
| ADediting_344735 | ENST00000179259.6 | chr12_4353565_+ | 1746 | -2612.00 | -2609.00 | -2652.30 |
| ADediting_344736 | ENST00000179259.6 | chr12_4353582_+ | 1763 | -2609.00 | -2609.00 | -2652.30 |
| ADediting_344737 | ENST00000179259.6 | chr12_4353625_+ | 1806 | -2608.30 | -2609.00 | -2652.30 |
| ADediting_344738 | ENST00000179259.6 | chr12_4353634_+ | 1815 | -2609.70 | -2609.00 | -2652.30 |
| ADediting_344739 | ENST00000179259.6 | chr12_4353671_+ | 1852 | -2610.70 | -2609.00 | -2652.30 |
| ADediting_344740 | ENST00000179259.6 | chr12_4353700_+ | 1881 | -2610.00 | -2609.00 | -2652.30 |
| ADediting_344741 | ENST00000179259.6 | chr12_4353713_+ | 1894 | -2608.10 | -2609.00 | -2652.30 |
| ADediting_344742 | ENST00000179259.6 | chr12_4353714_+ | 1895 | -2612.00 | -2609.00 | -2652.30 |
| ADediting_344743 | ENST00000179259.6 | chr12_4353740_+ | 1921 | -2613.10 | -2609.00 | -2652.30 |
| ADediting_344744 | ENST00000179259.6 | chr12_4353755_+ | 1936 | -2610.10 | -2609.00 | -2652.30 |
| ADediting_344745 | ENST00000179259.6 | chr12_4353809_+ | 1990 | -2612.40 | -2609.00 | -2652.30 |
| ADediting_344746 | ENST00000179259.6 | chr12_4354788_+ | 2969 | -2615.20 | -2609.00 | -2652.30 |
| ADediting_344747 | ENST00000179259.6 | chr12_4354796_+ | 2977 | -2605.40 | -2609.00 | -2652.30 |
| ADediting_344748 | ENST00000179259.6 | chr12_4354806_+ | 2987 | -2608.60 | -2609.00 | -2652.30 |
| ADediting_344749 | ENST00000179259.6 | chr12_4354812_+ | 2993 | -2608.70 | -2609.00 | -2652.30 |
| ADediting_344750 | ENST00000179259.6 | chr12_4354831_+ | 3012 | -2609.70 | -2609.00 | -2652.30 |
| ADediting_344751 | ENST00000179259.6 | chr12_4354832_+ | 3013 | -2611.60 | -2609.00 | -2652.30 |
| ADediting_344752 | ENST00000179259.6 | chr12_4354835_+ | 3016 | -2611.80 | -2609.00 | -2652.30 |
| ADediting_344753 | ENST00000179259.6 | chr12_4354849_+ | 3030 | -2608.30 | -2609.00 | -2652.30 |
| ADediting_344754 | ENST00000179259.6 | chr12_4354861_+ | 3042 | -2608.70 | -2609.00 | -2652.30 |
| ADediting_344755 | ENST00000179259.6 | chr12_4354871_+ | 3052 | -2609.00 | -2609.00 | -2652.30 |
| ADediting_344756 | ENST00000179259.6 | chr12_4354914_+ | 3095 | -2615.60 | -2609.00 | -2652.30 |
| ADediting_344757 | ENST00000179259.6 | chr12_4354940_+ | 3121 | -2608.30 | -2609.00 | -2652.30 |
| ADediting_344758 | ENST00000179259.6 | chr12_4354974_+ | 3155 | -2612.90 | -2609.00 | -2652.30 |
| ADediting_344759 | ENST00000179259.6 | chr12_4354992_+ | 3173 | -2609.10 | -2609.00 | -2652.30 |
| ADediting_344760 | ENST00000179259.6 | chr12_4354993_+ | 3174 | -2608.70 | -2609.00 | -2652.30 |
| ADediting_344761 | ENST00000179259.6 | chr12_4355011_+ | 3192 | -2613.00 | -2609.00 | -2652.30 |
| ADediting_344762 | ENST00000179259.6 | chr12_4355014_+ | 3195 | -2609.00 | -2609.00 | -2652.30 |
| ADediting_344763 | ENST00000179259.6 | chr12_4357871_+ | 6052 | -2612.40 | -2609.00 | -2652.30 |
| ADediting_344764 | ENST00000179259.6 | chr12_4357879_+ | 6060 | -2613.70 | -2609.00 | -2652.30 |
| ADediting_344765 | ENST00000179259.6 | chr12_4357920_+ | 6101 | -2612.80 | -2609.00 | -2652.30 |
| ADediting_344766 | ENST00000179259.6 | chr12_4357983_+ | 6164 | -2608.70 | -2609.00 | -2652.30 |
| ADediting_344767 | ENST00000179259.6 | chr12_4358054_+ | 6235 | -2608.70 | -2609.00 | -2652.30 |
| ADediting_344768 | ENST00000179259.6 | chr12_4358188_+ | 6369 | -2609.00 | -2609.00 | -2652.30 |
| ADediting_344769 | ENST00000179259.6 | chr12_4358211_+ | 6392 | -2609.00 | -2609.00 | -2652.30 |
| ADediting_344770 | ENST00000179259.6 | chr12_4358220_+ | 6401 | -2609.00 | -2609.00 | -2652.30 |
| ADediting_344771 | ENST00000179259.6 | chr12_4358235_+ | 6416 | -2609.00 | -2609.00 | -2652.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TIGAR |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_344666 | chr12_4327262_+ | 0.0101022413887453 | -0.145904177289872 | 2.72467979562944e-05 | -0.235861617072458 | 1.53015611228049e-08 | 0.314443560225216 |
| DLPFC | ADediting_344678 | chr12_4327807_+ | 0.411921065458483 | -0.0467656905220011 | 0.0116534359059244 | -0.143106568304634 | 6.3551523046133e-11 | 0.360099881834726 |
| DLPFC | ADediting_344681 | chr12_4327865_+ | 0.75094051529525 | -0.0180987157841344 | 0.0395895433960589 | -0.116957932930594 | 2.08120234171925e-10 | 0.350832581946512 |
| DLPFC | ADediting_344692 | chr12_4337247_+ | 0.294616067591967 | 0.0597132747051581 | 0.734929785153127 | -0.0193059768958817 | 2.06549189562639e-08 | 0.31171423925313 |
| DLPFC | ADediting_344698 | chr12_4337388_+ | 0.33967230194925 | 0.0544093510562259 | 0.0845233759220266 | -0.0981345340268974 | 6.79822571675758e-18 | 0.463225770490855 |
| DLPFC | ADediting_344700 | chr12_4337394_+ | 0.655974130529738 | 0.0253999950438264 | 0.0233334346863119 | -0.128793181300713 | 2.61018772526743e-20 | 0.492088983606393 |
| DLPFC | ADediting_344702 | chr12_4337412_+ | 0.482573459934091 | -0.0400262596848233 | 0.00735256558672774 | -0.151967431072735 | 2.95961664679202e-09 | 0.328923537699998 |
| DLPFC | ADediting_344708 | chr12_4337929_+ | 0.165922835313173 | 0.0788828041398954 | 0.412880431304751 | -0.0466699040787767 | 8.50976827113356e-16 | 0.435738094224481 |
| DLPFC | ADediting_344714 | chr12_4337980_+ | 0.719742663786474 | 0.0204591428869766 | 0.293694219848724 | -0.0598271952772099 | 1.58458880673513e-09 | 0.334235852343087 |
| DLPFC | ADediting_344717 | chr12_4337988_+ | 0.481136802613303 | 0.0401575947740737 | 0.456873646619306 | -0.0424089330677303 | 4.93497699301821e-09 | 0.324498671341892 |
| DLPFC | ADediting_344722 | chr12_4347904_+ | 0.335743763689689 | 0.0548529393415968 | 0.127131256144162 | -0.0868303589442767 | 1.90748753776157e-23 | 0.525893318697021 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.94766694522927e-58 | 0.754400651233885 | 5.77185318963103e-39 | 0.652371394465885 | 8.88801332112634e-14 | 0.406695593738979 |
| AC | 2.04044119277863e-54 | 0.789137916909049 | 2.31534985800598e-37 | 0.694766465312864 | 8.91521551400982e-18 | 0.507582152920696 |
| PCC | 8.85344762297452e-32 | 0.719760422756355 | 3.22070730082308e-45 | 0.807601738326468 | 0.184999944784796 | 0.0963201147738464 |
| CER | 1.18693800583384e-16 | 0.609928017820136 | 2.11049643778272e-09 | 0.464601673776795 | 0.148136926858216 | 0.118652178268228 |
| TCX | 7.92669952874461e-37 | 0.814564710839619 | 8.47941827258814e-12 | 0.520696309815612 | 0.0593658762325636 | 0.154315757562608 |
| FP | 1.09164104064547e-15 | 0.553689220912889 | 6.46335731993782e-14 | 0.523546899962744 | 0.261427192352489 | 0.0846193259652807 |
| IFG | 0.000396742306932704 | 0.653490470773716 | 4.76148438639761e-05 | 0.72111200338514 | 0.0939608658767632 | 0.342290925932648 |
| PG | 7.03408356223062e-42 | 0.795434293463818 | 1.83338816757181e-24 | 0.658178067208147 | 0.448508448626439 | -0.055905614844954 |
| STG | 5.23665097986176e-12 | 0.665008270182369 | 1.92307420430615e-11 | 0.651558121890488 | 0.600121577363695 | -0.0580188397268298 |
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Relation with AD stages for TIGAR |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.00139046590127758 | 0.30660517702391 |
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RelatedDrugs for TIGAR |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TIGAR |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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