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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for PSMB5 |
 Gene summary |
| Gene information | Gene symbol | PSMB5 | Gene ID | 5693 |
| Gene name | proteasome 20S subunit beta 5 | |
| Synonyms | LMPX|MB1|X | |
| Cytomap | 14q11.2 | |
| Type of gene | protein-coding | |
| Description | proteasome subunit beta type-5PSX large multifunctional protease Xmacropain epsilon chainmulticatalytic endopeptidase complex epsilon chainproteasome (prosome, macropain) subunit, beta type, 5proteasome beta 5 subunitproteasome catalytic subunit 3p | |
| Modification date | 20200313 | |
| UniProtAcc | P28074, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| PSMB5 | GO:0006508 | proteolysis | 17540904 |
Top |
RNA A-to-I events for PSMB5 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_420833(23016752, -), ADediting_420834(23016786, -), ADediting_420835(23016791, -), ADediting_420836(23016796, -), ADediting_420837(23018625, -), ADediting_420838(23018698, -), ADediting_420839(23018710, -), ADediting_420840(23018713, -), ADediting_420841(23018746, -), ADediting_420842(23018775, -), ADediting_420843(23018996, -), ADediting_420844(23019003, -), ADediting_420845(23019009, -), ADediting_420846(23019038, -), ADediting_420847(23019048, -), ADediting_420848(23026477, -), ADediting_420849(23026479, -), ADediting_420850(23026522, -), ADediting_420851(23026542, -), ADediting_420852(23026555, -), ADediting_420853(23026561, -), ADediting_420854(23026569, -), ADediting_420855(23026570, -), ADediting_420856(23026578, -), ADediting_420857(23026587, -), ADediting_420858(23026600, -), ADediting_420859(23026614, -), ADediting_420860(23026643, -), ADediting_420861(23026653, -), ADediting_420862(23026654, -), ADediting_420863(23026668, -), ADediting_420864(23026669, -), ADediting_420865(23026677, -), ADediting_420866(23026684, -), ADediting_420867(23026692, -), ADediting_420868(23026697, -), ADediting_420869(23026700, -), ADediting_420870(23026717, -), ADediting_420871(23026722, -), ADediting_420872(23026723, -), ADediting_420873(23026820, -), ADediting_420874(23026824, -), ADediting_420875(23026826, -), ADediting_420876(23026838, -), ADediting_420877(23026848, -), ADediting_420878(23026880, -), ADediting_420879(23026917, -), ADediting_420880(23026920, -), ADediting_420881(23026999, -), ADediting_420882(23027006, -), ADediting_420883(23027077, -), ADediting_420884(23027126, -), ADediting_420885(23027193, -), ADediting_420886(23027218, -), ADediting_420887(23027241, -), ADediting_420888(23027269, -), ADediting_420889(23027343, -), ADediting_420890(23028021, -), ADediting_420891(23028031, -), ADediting_420892(23028067, -), ADediting_420893(23028234, -), ADediting_420894(23029577, -), ADediting_420895(23029578, -), ADediting_420896(23029579, -), ADediting_420897(23029581, -), ADediting_420898(23029599, -), ADediting_420899(23029612, -), ADediting_420900(23029614, -), ADediting_420901(23029619, -), ADediting_420902(23029620, -), ADediting_420903(23029623, -), ADediting_420904(23029632, -), ADediting_420905(23029643, -), ADediting_420906(23029644, -), ADediting_420907(23029662, -), ADediting_420908(23029675, -), ADediting_420909(23029688, -), ADediting_420910(23029689, -), ADediting_420911(23029725, -), ADediting_420912(23029732, -), ADediting_420913(23029742, -), ADediting_420914(23029751, -), ADediting_420915(23029752, -), ADediting_420916(23029762, -), ADediting_420917(23029778, -), ADediting_420918(23029783, -), ADediting_420919(23029820, -), ADediting_420920(23029874, -), ADediting_420921(23029897, -), ADediting_420922(23029910, -), ADediting_420923(23029920, -), ADediting_420924(23029953, -), ADediting_420925(23029956, -), ADediting_420926(23029962, -), ADediting_420927(23030010, -), ADediting_420928(23030081, -), ADediting_420929(23030082, -), ADediting_420930(23030105, -), ADediting_420931(23030150, -), ADediting_420932(23030245, -), ADediting_420933(23030271, -), ADediting_420934(23030300, -), ADediting_420935(23030322, -), ADediting_420936(23030367, -), ADediting_420937(23030377, -), ADediting_420938(23030389, -), ADediting_420939(23030402, -), ADediting_420940(23030407, -), ADediting_420941(23030426, -), ADediting_420942(23030692, -), ADediting_420943(23030715, -), ADediting_420944(23030744, -), ADediting_420945(23030747, -), ADediting_420946(23030755, -), ADediting_420947(23030761, -), ADediting_420948(23030764, -), ADediting_420949(23030783, -), ADediting_420950(23030804, -), ADediting_420951(23030814, -), ADediting_420952(23030826, -), ADediting_420953(23030842, -), ADediting_420954(23030843, -), ADediting_420955(23030856, -), ADediting_420956(23030862, -), ADediting_420957(23030863, -), ADediting_420958(23030868, -), ADediting_420959(23030873, -), ADediting_420960(23030886, -), ADediting_420961(23030903, -), ADediting_420962(23031832, -), ADediting_420963(23031844, -), ADediting_420964(23031897, -), ADediting_420965(23031909, -), ADediting_420966(23031917, -), ADediting_420967(23031923, -), ADediting_420968(23031926, -), ADediting_420969(23031932, -), ADediting_420970(23031940, -), ADediting_420971(23031941, -), ADediting_420972(23031967, -), ADediting_420973(23031977, -), ADediting_420974(23031981, -), ADediting_420975(23031988, -), ADediting_420976(23032006, -), ADediting_420977(23032007, -), ADediting_420978(23032013, -), ADediting_420979(23032037, -), ADediting_420980(23032186, -), ADediting_420981(23032187, -), ADediting_420982(23032188, -), ADediting_420983(23032194, -), ADediting_420984(23032200, -), ADediting_420985(23032262, -), ADediting_420986(23032265, -), ADediting_420987(23032279, -), ADediting_420988(23032282, -), ADediting_420989(23032300, -), ADediting_420990(23032312, -), ADediting_420991(23032319, -), ADediting_420992(23032322, -), ADediting_420993(23032332, -), ADediting_420994(23032335, -), ADediting_420995(23032336, -), ADediting_420996(23032381, -), ADediting_420997(23032384, -), ADediting_420998(23032387, -), ADediting_420999(23032392, -), ADediting_421000(23032405, -), ADediting_421001(23032431, -), ADediting_421002(23032438, -), ADediting_421003(23032634, -), ADediting_421004(23032675, -), ADediting_421005(23032691, -), ADediting_421006(23032702, -), ADediting_421007(23032723, -), ADediting_421008(23032731, -), ADediting_421009(23032737, -), ADediting_421010(23032747, -), ADediting_421011(23032763, -), ADediting_421012(23032793, -), ADediting_421013(23032794, -), ADediting_421014(23032795, -), ADediting_421015(23032800, -), ADediting_421016(23032801, -), ADediting_421017(23032803, -), ADediting_421018(23032832, -), ADediting_421019(23032864, -), ADediting_421020(23032869, -), ADediting_421021(23032870, -), ADediting_421022(23032964, -), ADediting_421023(23032976, -), ADediting_421024(23032999, -), ADediting_421025(23033004, -), ADediting_421026(23033031, -), ADediting_421027(23033071, -), ADediting_421028(23033075, -), ADediting_421029(23033080, -), ADediting_421030(23033095, -), ADediting_421031(23033100, -), ADediting_421032(23033101, -), ADediting_421033(23033102, -), ADediting_421034(23033108, -), ADediting_421035(23033110, -), ADediting_421036(23033125, -), ADediting_421037(23033126, -), ADediting_421038(23033130, -), ADediting_421039(23033163, -), ADediting_1536389(23026517, -), ADediting_1536390(23026663, -), ADediting_1536391(23026970, -), ADediting_1536392(23027000, -), ADediting_1536393(23027025, -), ADediting_1536394(23027571, -), ADediting_1536395(23027634, -), ADediting_1536396(23029604, -), ADediting_1536397(23029649, -), ADediting_1536398(23029729, -), ADediting_1536399(23029786, -), ADediting_1536400(23030723, -), ADediting_1536401(23031989, -), ADediting_1536402(23032032, -), ADediting_1536403(23032201, -), ADediting_1536404(23032253, -), ADediting_1536405(23032309, -), ADediting_1536406(23032382, -), ADediting_1536407(23032942, -), ADediting_1536408(23033012, -), ADediting_1536409(23033085, -), |
Top |
RNA editing positional annotations for PSMB5 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_420833 | chr14_23016752_- | intronic |
| ADediting_420834 | chr14_23016786_- | intronic |
| ADediting_420835 | chr14_23016791_- | intronic |
| ADediting_420836 | chr14_23016796_- | intronic |
| ADediting_420837 | chr14_23018625_- | intronic |
| ADediting_420838 | chr14_23018698_- | intronic |
| ADediting_420839 | chr14_23018710_- | intronic |
| ADediting_420840 | chr14_23018713_- | intronic |
| ADediting_420841 | chr14_23018746_- | intronic |
| ADediting_420842 | chr14_23018775_- | intronic |
| ADediting_420843 | chr14_23018996_- | intronic |
| ADediting_420844 | chr14_23019003_- | intronic |
| ADediting_420845 | chr14_23019009_- | intronic |
| ADediting_420846 | chr14_23019038_- | intronic |
| ADediting_420847 | chr14_23019048_- | intronic |
| ADediting_420848 | chr14_23026477_- | intronic |
| ADediting_420849 | chr14_23026479_- | intronic |
| ADediting_420850 | chr14_23026522_- | intronic |
| ADediting_420851 | chr14_23026542_- | intronic |
| ADediting_420852 | chr14_23026555_- | intronic |
| ADediting_420853 | chr14_23026561_- | intronic |
| ADediting_420854 | chr14_23026569_- | intronic |
| ADediting_420855 | chr14_23026570_- | intronic |
| ADediting_420856 | chr14_23026578_- | intronic |
| ADediting_420857 | chr14_23026587_- | intronic |
| ADediting_420858 | chr14_23026600_- | intronic |
| ADediting_420859 | chr14_23026614_- | intronic |
| ADediting_420860 | chr14_23026643_- | intronic |
| ADediting_420861 | chr14_23026653_- | intronic |
| ADediting_420862 | chr14_23026654_- | intronic |
| ADediting_420863 | chr14_23026668_- | intronic |
| ADediting_420864 | chr14_23026669_- | intronic |
| ADediting_420865 | chr14_23026677_- | intronic |
| ADediting_420866 | chr14_23026684_- | intronic |
| ADediting_420867 | chr14_23026692_- | intronic |
| ADediting_420868 | chr14_23026697_- | intronic |
| ADediting_420869 | chr14_23026700_- | intronic |
| ADediting_420870 | chr14_23026717_- | intronic |
| ADediting_420871 | chr14_23026722_- | intronic |
| ADediting_420872 | chr14_23026723_- | intronic |
| ADediting_420873 | chr14_23026820_- | intronic |
| ADediting_420874 | chr14_23026824_- | intronic |
| ADediting_420875 | chr14_23026826_- | intronic |
| ADediting_420876 | chr14_23026838_- | intronic |
| ADediting_420877 | chr14_23026848_- | intronic |
| ADediting_420878 | chr14_23026880_- | intronic |
| ADediting_420879 | chr14_23026917_- | intronic |
| ADediting_420880 | chr14_23026920_- | intronic |
| ADediting_420881 | chr14_23026999_- | intronic |
| ADediting_420882 | chr14_23027006_- | intronic |
| ADediting_420883 | chr14_23027077_- | intronic |
| ADediting_420884 | chr14_23027126_- | intronic |
| ADediting_420885 | chr14_23027193_- | intronic |
| ADediting_420886 | chr14_23027218_- | intronic |
| ADediting_420887 | chr14_23027241_- | intronic |
| ADediting_420888 | chr14_23027269_- | intronic |
| ADediting_420889 | chr14_23027343_- | intronic |
| ADediting_420890 | chr14_23028021_- | intronic |
| ADediting_420891 | chr14_23028031_- | intronic |
| ADediting_420892 | chr14_23028067_- | intronic |
| ADediting_420893 | chr14_23028234_- | intronic |
| ADediting_420894 | chr14_23029577_- | intronic |
| ADediting_420895 | chr14_23029578_- | intronic |
| ADediting_420896 | chr14_23029579_- | intronic |
| ADediting_420897 | chr14_23029581_- | intronic |
| ADediting_420898 | chr14_23029599_- | intronic |
| ADediting_420899 | chr14_23029612_- | intronic |
| ADediting_420900 | chr14_23029614_- | intronic |
| ADediting_420901 | chr14_23029619_- | intronic |
| ADediting_420902 | chr14_23029620_- | intronic |
| ADediting_420903 | chr14_23029623_- | intronic |
| ADediting_420904 | chr14_23029632_- | intronic |
| ADediting_420905 | chr14_23029643_- | intronic |
| ADediting_420906 | chr14_23029644_- | intronic |
| ADediting_420907 | chr14_23029662_- | intronic |
| ADediting_420908 | chr14_23029675_- | intronic |
| ADediting_420909 | chr14_23029688_- | intronic |
| ADediting_420910 | chr14_23029689_- | intronic |
| ADediting_420911 | chr14_23029725_- | intronic |
| ADediting_420912 | chr14_23029732_- | intronic |
| ADediting_420913 | chr14_23029742_- | intronic |
| ADediting_420914 | chr14_23029751_- | intronic |
| ADediting_420915 | chr14_23029752_- | intronic |
| ADediting_420916 | chr14_23029762_- | intronic |
| ADediting_420917 | chr14_23029778_- | intronic |
| ADediting_420918 | chr14_23029783_- | intronic |
| ADediting_420919 | chr14_23029820_- | intronic |
| ADediting_420920 | chr14_23029874_- | intronic |
| ADediting_420921 | chr14_23029897_- | intronic |
| ADediting_420922 | chr14_23029910_- | intronic |
| ADediting_420923 | chr14_23029920_- | intronic |
| ADediting_420924 | chr14_23029953_- | intronic |
| ADediting_420925 | chr14_23029956_- | intronic |
| ADediting_420926 | chr14_23029962_- | intronic |
| ADediting_420927 | chr14_23030010_- | intronic |
| ADediting_420928 | chr14_23030081_- | intronic |
| ADediting_420929 | chr14_23030082_- | intronic |
| ADediting_420930 | chr14_23030105_- | intronic |
| ADediting_420931 | chr14_23030150_- | intronic |
| ADediting_420932 | chr14_23030245_- | intronic |
| ADediting_420933 | chr14_23030271_- | intronic |
| ADediting_420934 | chr14_23030300_- | intronic |
| ADediting_420935 | chr14_23030322_- | intronic |
| ADediting_420936 | chr14_23030367_- | intronic |
| ADediting_420937 | chr14_23030377_- | intronic |
| ADediting_420938 | chr14_23030389_- | intronic |
| ADediting_420939 | chr14_23030402_- | intronic |
| ADediting_420940 | chr14_23030407_- | intronic |
| ADediting_420941 | chr14_23030426_- | intronic |
| ADediting_420942 | chr14_23030692_- | intronic |
| ADediting_420943 | chr14_23030715_- | intronic |
| ADediting_420944 | chr14_23030744_- | intronic |
| ADediting_420945 | chr14_23030747_- | intronic |
| ADediting_420946 | chr14_23030755_- | intronic |
| ADediting_420947 | chr14_23030761_- | intronic |
| ADediting_420948 | chr14_23030764_- | intronic |
| ADediting_420949 | chr14_23030783_- | intronic |
| ADediting_420950 | chr14_23030804_- | intronic |
| ADediting_420951 | chr14_23030814_- | intronic |
| ADediting_420952 | chr14_23030826_- | intronic |
| ADediting_420953 | chr14_23030842_- | intronic |
| ADediting_420954 | chr14_23030843_- | intronic |
| ADediting_420955 | chr14_23030856_- | intronic |
| ADediting_420956 | chr14_23030862_- | intronic |
| ADediting_420957 | chr14_23030863_- | intronic |
| ADediting_420958 | chr14_23030868_- | intronic |
| ADediting_420959 | chr14_23030873_- | intronic |
| ADediting_420960 | chr14_23030886_- | intronic |
| ADediting_420961 | chr14_23030903_- | intronic |
| ADediting_420962 | chr14_23031832_- | intronic |
| ADediting_420963 | chr14_23031844_- | intronic |
| ADediting_420964 | chr14_23031897_- | intronic |
| ADediting_420965 | chr14_23031909_- | intronic |
| ADediting_420966 | chr14_23031917_- | intronic |
| ADediting_420967 | chr14_23031923_- | intronic |
| ADediting_420968 | chr14_23031926_- | intronic |
| ADediting_420969 | chr14_23031932_- | intronic |
| ADediting_420970 | chr14_23031940_- | intronic |
| ADediting_420971 | chr14_23031941_- | intronic |
| ADediting_420972 | chr14_23031967_- | intronic |
| ADediting_420973 | chr14_23031977_- | intronic |
| ADediting_420974 | chr14_23031981_- | intronic |
| ADediting_420975 | chr14_23031988_- | intronic |
| ADediting_420976 | chr14_23032006_- | intronic |
| ADediting_420977 | chr14_23032007_- | intronic |
| ADediting_420978 | chr14_23032013_- | intronic |
| ADediting_420979 | chr14_23032037_- | intronic |
| ADediting_420980 | chr14_23032186_- | intronic |
| ADediting_420981 | chr14_23032187_- | intronic |
| ADediting_420982 | chr14_23032188_- | intronic |
| ADediting_420983 | chr14_23032194_- | intronic |
| ADediting_420984 | chr14_23032200_- | intronic |
| ADediting_420985 | chr14_23032262_- | intronic |
| ADediting_420986 | chr14_23032265_- | intronic |
| ADediting_420987 | chr14_23032279_- | intronic |
| ADediting_420988 | chr14_23032282_- | intronic |
| ADediting_420989 | chr14_23032300_- | intronic |
| ADediting_420990 | chr14_23032312_- | intronic |
| ADediting_420991 | chr14_23032319_- | intronic |
| ADediting_420992 | chr14_23032322_- | intronic |
| ADediting_420993 | chr14_23032332_- | intronic |
| ADediting_420994 | chr14_23032335_- | intronic |
| ADediting_420995 | chr14_23032336_- | intronic |
| ADediting_420996 | chr14_23032381_- | intronic |
| ADediting_420997 | chr14_23032384_- | intronic |
| ADediting_420998 | chr14_23032387_- | intronic |
| ADediting_420999 | chr14_23032392_- | intronic |
| ADediting_421000 | chr14_23032405_- | intronic |
| ADediting_421001 | chr14_23032431_- | intronic |
| ADediting_421002 | chr14_23032438_- | intronic |
| ADediting_421003 | chr14_23032634_- | intronic |
| ADediting_421004 | chr14_23032675_- | intronic |
| ADediting_421005 | chr14_23032691_- | intronic |
| ADediting_421006 | chr14_23032702_- | intronic |
| ADediting_421007 | chr14_23032723_- | intronic |
| ADediting_421008 | chr14_23032731_- | intronic |
| ADediting_421009 | chr14_23032737_- | intronic |
| ADediting_421010 | chr14_23032747_- | intronic |
| ADediting_421011 | chr14_23032763_- | intronic |
| ADediting_421012 | chr14_23032793_- | intronic |
| ADediting_421013 | chr14_23032794_- | intronic |
| ADediting_421014 | chr14_23032795_- | intronic |
| ADediting_421015 | chr14_23032800_- | intronic |
| ADediting_421016 | chr14_23032801_- | intronic |
| ADediting_421017 | chr14_23032803_- | intronic |
| ADediting_421018 | chr14_23032832_- | intronic |
| ADediting_421019 | chr14_23032864_- | intronic |
| ADediting_421020 | chr14_23032869_- | intronic |
| ADediting_421021 | chr14_23032870_- | intronic |
| ADediting_421022 | chr14_23032964_- | intronic |
| ADediting_421023 | chr14_23032976_- | intronic |
| ADediting_421024 | chr14_23032999_- | intronic |
| ADediting_421025 | chr14_23033004_- | intronic |
| ADediting_421026 | chr14_23033031_- | intronic |
| ADediting_421027 | chr14_23033071_- | intronic |
| ADediting_421028 | chr14_23033075_- | intronic |
| ADediting_421029 | chr14_23033080_- | intronic |
| ADediting_421030 | chr14_23033095_- | intronic |
| ADediting_421031 | chr14_23033100_- | intronic |
| ADediting_421032 | chr14_23033101_- | intronic |
| ADediting_421033 | chr14_23033102_- | intronic |
| ADediting_421034 | chr14_23033108_- | intronic |
| ADediting_421035 | chr14_23033110_- | intronic |
| ADediting_421036 | chr14_23033125_- | intronic |
| ADediting_421037 | chr14_23033126_- | intronic |
| ADediting_421038 | chr14_23033130_- | intronic |
| ADediting_421039 | chr14_23033163_- | intronic |
| ADediting_1536389 | chr14_23026517_- | intronic |
| ADediting_1536390 | chr14_23026663_- | intronic |
| ADediting_1536391 | chr14_23026970_- | intronic |
| ADediting_1536392 | chr14_23027000_- | intronic |
| ADediting_1536393 | chr14_23027025_- | intronic |
| ADediting_1536394 | chr14_23027571_- | intronic |
| ADediting_1536395 | chr14_23027634_- | intronic |
| ADediting_1536396 | chr14_23029604_- | intronic |
| ADediting_1536397 | chr14_23029649_- | intronic |
| ADediting_1536398 | chr14_23029729_- | intronic |
| ADediting_1536399 | chr14_23029786_- | intronic |
| ADediting_1536400 | chr14_23030723_- | intronic |
| ADediting_1536401 | chr14_23031989_- | intronic |
| ADediting_1536402 | chr14_23032032_- | intronic |
| ADediting_1536403 | chr14_23032201_- | intronic |
| ADediting_1536404 | chr14_23032253_- | intronic |
| ADediting_1536405 | chr14_23032309_- | intronic |
| ADediting_1536406 | chr14_23032382_- | intronic |
| ADediting_1536407 | chr14_23032942_- | intronic |
| ADediting_1536408 | chr14_23033012_- | intronic |
| ADediting_1536409 | chr14_23033085_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_420833 | chr14_23016752_- | SINE | Alu | Name=AluSx1 |
| ADediting_420834 | chr14_23016786_- | SINE | Alu | Name=AluSx1 |
| ADediting_420835 | chr14_23016791_- | SINE | Alu | Name=AluSx1 |
| ADediting_420836 | chr14_23016796_- | SINE | Alu | Name=AluSx1 |
| ADediting_420837 | chr14_23018625_- | SINE | Alu | Name=AluY |
| ADediting_420838 | chr14_23018698_- | SINE | Alu | Name=AluY |
| ADediting_420839 | chr14_23018710_- | SINE | Alu | Name=AluY |
| ADediting_420840 | chr14_23018713_- | SINE | Alu | Name=AluY |
| ADediting_420841 | chr14_23018746_- | SINE | Alu | Name=AluY |
| ADediting_420842 | chr14_23018775_- | SINE | Alu | Name=AluY |
| ADediting_420843 | chr14_23018996_- | SINE | Alu | Name=AluSx |
| ADediting_420844 | chr14_23019003_- | SINE | Alu | Name=AluSx |
| ADediting_420845 | chr14_23019009_- | SINE | Alu | Name=AluSx |
| ADediting_420846 | chr14_23019038_- | SINE | Alu | Name=AluSx |
| ADediting_420847 | chr14_23019048_- | SINE | Alu | Name=AluSx |
| ADediting_420848 | chr14_23026477_- | SINE | Alu | Name=AluSq2 |
| ADediting_420849 | chr14_23026479_- | SINE | Alu | Name=AluSq2 |
| ADediting_420850 | chr14_23026522_- | SINE | Alu | Name=AluSq2 |
| ADediting_420851 | chr14_23026542_- | SINE | Alu | Name=AluSq2 |
| ADediting_420852 | chr14_23026555_- | SINE | Alu | Name=AluSq2 |
| ADediting_420853 | chr14_23026561_- | SINE | Alu | Name=AluSq2 |
| ADediting_420854 | chr14_23026569_- | SINE | Alu | Name=AluSq2 |
| ADediting_420855 | chr14_23026570_- | SINE | Alu | Name=AluSq2 |
| ADediting_420856 | chr14_23026578_- | SINE | Alu | Name=AluSq2 |
| ADediting_420857 | chr14_23026587_- | SINE | Alu | Name=AluSq2 |
| ADediting_420858 | chr14_23026600_- | SINE | Alu | Name=AluSq2 |
| ADediting_420859 | chr14_23026614_- | SINE | Alu | Name=AluSq2 |
| ADediting_420860 | chr14_23026643_- | SINE | Alu | Name=AluSq2 |
| ADediting_420861 | chr14_23026653_- | SINE | Alu | Name=AluSq2 |
| ADediting_420862 | chr14_23026654_- | SINE | Alu | Name=AluSq2 |
| ADediting_420863 | chr14_23026668_- | SINE | Alu | Name=AluSq2 |
| ADediting_420864 | chr14_23026669_- | SINE | Alu | Name=AluSq2 |
| ADediting_420865 | chr14_23026677_- | SINE | Alu | Name=AluSq2 |
| ADediting_420866 | chr14_23026684_- | SINE | Alu | Name=AluSq2 |
| ADediting_420867 | chr14_23026692_- | SINE | Alu | Name=AluSq2 |
| ADediting_420868 | chr14_23026697_- | SINE | Alu | Name=AluSq2 |
| ADediting_420869 | chr14_23026700_- | SINE | Alu | Name=AluSq2 |
| ADediting_420870 | chr14_23026717_- | SINE | Alu | Name=AluSq2 |
| ADediting_420871 | chr14_23026722_- | SINE | Alu | Name=AluSq2 |
| ADediting_420872 | chr14_23026723_- | SINE | Alu | Name=AluSq2 |
| ADediting_420873 | chr14_23026820_- | SINE | Alu | Name=AluSp |
| ADediting_420874 | chr14_23026824_- | SINE | Alu | Name=AluSp |
| ADediting_420875 | chr14_23026826_- | SINE | Alu | Name=AluSp |
| ADediting_420876 | chr14_23026838_- | SINE | Alu | Name=AluSp |
| ADediting_420877 | chr14_23026848_- | SINE | Alu | Name=AluSp |
| ADediting_420878 | chr14_23026880_- | SINE | Alu | Name=AluSp |
| ADediting_420879 | chr14_23026917_- | SINE | Alu | Name=AluSp |
| ADediting_420880 | chr14_23026920_- | SINE | Alu | Name=AluSp |
| ADediting_420881 | chr14_23026999_- | SINE | Alu | Name=AluSp |
| ADediting_420882 | chr14_23027006_- | SINE | Alu | Name=AluSp |
| ADediting_420883 | chr14_23027077_- | SINE | Alu | Name=AluSp |
| ADediting_420884 | chr14_23027126_- | SINE | Alu | Name=AluY |
| ADediting_420885 | chr14_23027193_- | SINE | Alu | Name=AluY |
| ADediting_420886 | chr14_23027218_- | SINE | Alu | Name=AluY |
| ADediting_420887 | chr14_23027241_- | SINE | Alu | Name=AluY |
| ADediting_420888 | chr14_23027269_- | SINE | Alu | Name=AluY |
| ADediting_420889 | chr14_23027343_- | SINE | Alu | Name=AluY |
| ADediting_420890 | chr14_23028021_- | SINE | Alu | Name=AluSp |
| ADediting_420891 | chr14_23028031_- | SINE | Alu | Name=AluSp |
| ADediting_420892 | chr14_23028067_- | SINE | Alu | Name=AluSp |
| ADediting_420893 | chr14_23028234_- | SINE | Alu | Name=AluJb |
| ADediting_420894 | chr14_23029577_- | SINE | Alu | Name=AluSq2 |
| ADediting_420895 | chr14_23029578_- | SINE | Alu | Name=AluSq2 |
| ADediting_420896 | chr14_23029579_- | SINE | Alu | Name=AluSq2 |
| ADediting_420897 | chr14_23029581_- | SINE | Alu | Name=AluSq2 |
| ADediting_420898 | chr14_23029599_- | SINE | Alu | Name=AluSq2 |
| ADediting_420899 | chr14_23029612_- | SINE | Alu | Name=AluSq2 |
| ADediting_420900 | chr14_23029614_- | SINE | Alu | Name=AluSq2 |
| ADediting_420901 | chr14_23029619_- | SINE | Alu | Name=AluSq2 |
| ADediting_420902 | chr14_23029620_- | SINE | Alu | Name=AluSq2 |
| ADediting_420903 | chr14_23029623_- | SINE | Alu | Name=AluSq2 |
| ADediting_420904 | chr14_23029632_- | SINE | Alu | Name=AluSq2 |
| ADediting_420905 | chr14_23029643_- | SINE | Alu | Name=AluSq2 |
| ADediting_420906 | chr14_23029644_- | SINE | Alu | Name=AluSq2 |
| ADediting_420907 | chr14_23029662_- | SINE | Alu | Name=AluSq2 |
| ADediting_420908 | chr14_23029675_- | SINE | Alu | Name=AluSq2 |
| ADediting_420909 | chr14_23029688_- | SINE | Alu | Name=AluSq2 |
| ADediting_420910 | chr14_23029689_- | SINE | Alu | Name=AluSq2 |
| ADediting_420911 | chr14_23029725_- | SINE | Alu | Name=AluSx |
| ADediting_420912 | chr14_23029732_- | SINE | Alu | Name=AluSx |
| ADediting_420913 | chr14_23029742_- | SINE | Alu | Name=AluSx |
| ADediting_420914 | chr14_23029751_- | SINE | Alu | Name=AluSx |
| ADediting_420915 | chr14_23029752_- | SINE | Alu | Name=AluSx |
| ADediting_420916 | chr14_23029762_- | SINE | Alu | Name=AluSx |
| ADediting_420917 | chr14_23029778_- | SINE | Alu | Name=AluSx |
| ADediting_420918 | chr14_23029783_- | SINE | Alu | Name=AluY |
| ADediting_420919 | chr14_23029820_- | SINE | Alu | Name=AluY |
| ADediting_420920 | chr14_23029874_- | SINE | Alu | Name=AluY |
| ADediting_420921 | chr14_23029897_- | SINE | Alu | Name=AluY |
| ADediting_420922 | chr14_23029910_- | SINE | Alu | Name=AluY |
| ADediting_420923 | chr14_23029920_- | SINE | Alu | Name=AluY |
| ADediting_420924 | chr14_23029953_- | SINE | Alu | Name=AluY |
| ADediting_420925 | chr14_23029956_- | SINE | Alu | Name=AluY |
| ADediting_420926 | chr14_23029962_- | SINE | Alu | Name=AluY |
| ADediting_420927 | chr14_23030010_- | SINE | Alu | Name=AluY |
| ADediting_420928 | chr14_23030081_- | SINE | Alu | Name=AluSx |
| ADediting_420929 | chr14_23030082_- | SINE | Alu | Name=AluSx |
| ADediting_420930 | chr14_23030105_- | SINE | Alu | Name=AluSx |
| ADediting_420931 | chr14_23030150_- | SINE | Alu | Name=AluSx |
| ADediting_420932 | chr14_23030245_- | SINE | Alu | Name=AluY |
| ADediting_420933 | chr14_23030271_- | SINE | Alu | Name=AluY |
| ADediting_420934 | chr14_23030300_- | SINE | Alu | Name=AluY |
| ADediting_420935 | chr14_23030322_- | SINE | Alu | Name=AluY |
| ADediting_420936 | chr14_23030367_- | SINE | Alu | Name=AluY |
| ADediting_420937 | chr14_23030377_- | SINE | Alu | Name=AluY |
| ADediting_420938 | chr14_23030389_- | SINE | Alu | Name=AluY |
| ADediting_420939 | chr14_23030402_- | SINE | Alu | Name=AluY |
| ADediting_420940 | chr14_23030407_- | SINE | Alu | Name=AluY |
| ADediting_420941 | chr14_23030426_- | SINE | Alu | Name=AluY |
| ADediting_420942 | chr14_23030692_- | SINE | Alu | Name=AluSq2 |
| ADediting_420943 | chr14_23030715_- | SINE | Alu | Name=AluSq2 |
| ADediting_420944 | chr14_23030744_- | SINE | Alu | Name=AluSq2 |
| ADediting_420945 | chr14_23030747_- | SINE | Alu | Name=AluSq2 |
| ADediting_420946 | chr14_23030755_- | SINE | Alu | Name=AluSq2 |
| ADediting_420947 | chr14_23030761_- | SINE | Alu | Name=AluSq2 |
| ADediting_420948 | chr14_23030764_- | SINE | Alu | Name=AluSq2 |
| ADediting_420949 | chr14_23030783_- | SINE | Alu | Name=AluSq2 |
| ADediting_420950 | chr14_23030804_- | SINE | Alu | Name=AluSq2 |
| ADediting_420951 | chr14_23030814_- | SINE | Alu | Name=AluSq2 |
| ADediting_420952 | chr14_23030826_- | SINE | Alu | Name=AluSq2 |
| ADediting_420953 | chr14_23030842_- | SINE | Alu | Name=AluSq2 |
| ADediting_420954 | chr14_23030843_- | SINE | Alu | Name=AluSq2 |
| ADediting_420955 | chr14_23030856_- | SINE | Alu | Name=AluSq2 |
| ADediting_420956 | chr14_23030862_- | SINE | Alu | Name=AluSq2 |
| ADediting_420957 | chr14_23030863_- | SINE | Alu | Name=AluSq2 |
| ADediting_420958 | chr14_23030868_- | SINE | Alu | Name=AluSq2 |
| ADediting_420959 | chr14_23030873_- | SINE | Alu | Name=AluSq2 |
| ADediting_420960 | chr14_23030886_- | SINE | Alu | Name=AluSq2 |
| ADediting_420961 | chr14_23030903_- | SINE | Alu | Name=AluSq2 |
| ADediting_420962 | chr14_23031832_- | SINE | Alu | Name=AluSx |
| ADediting_420963 | chr14_23031844_- | SINE | Alu | Name=AluSx |
| ADediting_420964 | chr14_23031897_- | SINE | Alu | Name=AluSx |
| ADediting_420965 | chr14_23031909_- | SINE | Alu | Name=AluSx |
| ADediting_420966 | chr14_23031917_- | SINE | Alu | Name=AluSx |
| ADediting_420967 | chr14_23031923_- | SINE | Alu | Name=AluSx |
| ADediting_420968 | chr14_23031926_- | SINE | Alu | Name=AluSx |
| ADediting_420969 | chr14_23031932_- | SINE | Alu | Name=AluSx |
| ADediting_420970 | chr14_23031940_- | SINE | Alu | Name=AluSx |
| ADediting_420971 | chr14_23031941_- | SINE | Alu | Name=AluSx |
| ADediting_420972 | chr14_23031967_- | SINE | Alu | Name=AluSx |
| ADediting_420973 | chr14_23031977_- | SINE | Alu | Name=AluSx |
| ADediting_420974 | chr14_23031981_- | SINE | Alu | Name=AluSx |
| ADediting_420975 | chr14_23031988_- | SINE | Alu | Name=AluSx |
| ADediting_420976 | chr14_23032006_- | SINE | Alu | Name=AluSx |
| ADediting_420977 | chr14_23032007_- | SINE | Alu | Name=AluSx |
| ADediting_420978 | chr14_23032013_- | SINE | Alu | Name=AluSx |
| ADediting_420979 | chr14_23032037_- | SINE | Alu | Name=AluSx |
| ADediting_420980 | chr14_23032186_- | SINE | Alu | Name=AluSq2 |
| ADediting_420981 | chr14_23032187_- | SINE | Alu | Name=AluSq2 |
| ADediting_420982 | chr14_23032188_- | SINE | Alu | Name=AluSq2 |
| ADediting_420983 | chr14_23032194_- | SINE | Alu | Name=AluSq2 |
| ADediting_420984 | chr14_23032200_- | SINE | Alu | Name=AluSq2 |
| ADediting_420985 | chr14_23032262_- | SINE | Alu | Name=AluSq2 |
| ADediting_420986 | chr14_23032265_- | SINE | Alu | Name=AluSq2 |
| ADediting_420987 | chr14_23032279_- | SINE | Alu | Name=AluSq2 |
| ADediting_420988 | chr14_23032282_- | SINE | Alu | Name=AluSq2 |
| ADediting_420989 | chr14_23032300_- | SINE | Alu | Name=AluSq2 |
| ADediting_420990 | chr14_23032312_- | SINE | Alu | Name=AluSq2 |
| ADediting_420991 | chr14_23032319_- | SINE | Alu | Name=AluSq2 |
| ADediting_420992 | chr14_23032322_- | SINE | Alu | Name=AluSq2 |
| ADediting_420993 | chr14_23032332_- | SINE | Alu | Name=AluSq2 |
| ADediting_420994 | chr14_23032335_- | SINE | Alu | Name=AluSq2 |
| ADediting_420995 | chr14_23032336_- | SINE | Alu | Name=AluSq2 |
| ADediting_420996 | chr14_23032381_- | SINE | Alu | Name=AluSq2 |
| ADediting_420997 | chr14_23032384_- | SINE | Alu | Name=AluSq2 |
| ADediting_420998 | chr14_23032387_- | SINE | Alu | Name=AluSq2 |
| ADediting_420999 | chr14_23032392_- | SINE | Alu | Name=AluSq2 |
| ADediting_421000 | chr14_23032405_- | SINE | Alu | Name=AluSq2 |
| ADediting_421001 | chr14_23032431_- | SINE | Alu | Name=AluSq2 |
| ADediting_421002 | chr14_23032438_- | SINE | Alu | Name=AluSq2 |
| ADediting_421003 | chr14_23032634_- | SINE | Alu | Name=AluY |
| ADediting_421004 | chr14_23032675_- | SINE | Alu | Name=AluY |
| ADediting_421005 | chr14_23032691_- | SINE | Alu | Name=AluY |
| ADediting_421006 | chr14_23032702_- | SINE | Alu | Name=AluY |
| ADediting_421007 | chr14_23032723_- | SINE | Alu | Name=AluY |
| ADediting_421008 | chr14_23032731_- | SINE | Alu | Name=AluY |
| ADediting_421009 | chr14_23032737_- | SINE | Alu | Name=AluY |
| ADediting_421010 | chr14_23032747_- | SINE | Alu | Name=AluY |
| ADediting_421011 | chr14_23032763_- | SINE | Alu | Name=AluY |
| ADediting_421012 | chr14_23032793_- | SINE | Alu | Name=AluY |
| ADediting_421013 | chr14_23032794_- | SINE | Alu | Name=AluY |
| ADediting_421014 | chr14_23032795_- | SINE | Alu | Name=AluY |
| ADediting_421015 | chr14_23032800_- | SINE | Alu | Name=AluY |
| ADediting_421016 | chr14_23032801_- | SINE | Alu | Name=AluY |
| ADediting_421017 | chr14_23032803_- | SINE | Alu | Name=AluY |
| ADediting_421018 | chr14_23032832_- | SINE | Alu | Name=AluY |
| ADediting_421019 | chr14_23032864_- | SINE | Alu | Name=AluY |
| ADediting_421020 | chr14_23032869_- | SINE | Alu | Name=AluY |
| ADediting_421021 | chr14_23032870_- | SINE | Alu | Name=AluY |
| ADediting_421022 | chr14_23032964_- | SINE | Alu | Name=AluSx1 |
| ADediting_421023 | chr14_23032976_- | SINE | Alu | Name=AluSx1 |
| ADediting_421024 | chr14_23032999_- | SINE | Alu | Name=AluSx1 |
| ADediting_421025 | chr14_23033004_- | SINE | Alu | Name=AluSx1 |
| ADediting_421026 | chr14_23033031_- | SINE | Alu | Name=AluSx1 |
| ADediting_421027 | chr14_23033071_- | SINE | Alu | Name=AluSx1 |
| ADediting_421028 | chr14_23033075_- | SINE | Alu | Name=AluSx1 |
| ADediting_421029 | chr14_23033080_- | SINE | Alu | Name=AluSx1 |
| ADediting_421030 | chr14_23033095_- | SINE | Alu | Name=AluSx1 |
| ADediting_421031 | chr14_23033100_- | SINE | Alu | Name=AluSx1 |
| ADediting_421032 | chr14_23033101_- | SINE | Alu | Name=AluSx1 |
| ADediting_421033 | chr14_23033102_- | SINE | Alu | Name=AluSx1 |
| ADediting_421034 | chr14_23033108_- | SINE | Alu | Name=AluSx1 |
| ADediting_421035 | chr14_23033110_- | SINE | Alu | Name=AluSx1 |
| ADediting_421036 | chr14_23033125_- | SINE | Alu | Name=AluSx1 |
| ADediting_421037 | chr14_23033126_- | SINE | Alu | Name=AluSx1 |
| ADediting_421038 | chr14_23033130_- | SINE | Alu | Name=AluSx1 |
| ADediting_421039 | chr14_23033163_- | SINE | Alu | Name=AluSx3 |
| ADediting_1536389 | chr14_23026517_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536390 | chr14_23026663_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536391 | chr14_23026970_- | SINE | Alu | Name=AluSp |
| ADediting_1536392 | chr14_23027000_- | SINE | Alu | Name=AluSp |
| ADediting_1536393 | chr14_23027025_- | SINE | Alu | Name=AluSp |
| ADediting_1536394 | chr14_23027571_- | SINE | Alu | Name=AluJo |
| ADediting_1536395 | chr14_23027634_- | SINE | Alu | Name=AluJo |
| ADediting_1536396 | chr14_23029604_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536397 | chr14_23029649_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536398 | chr14_23029729_- | SINE | Alu | Name=AluSx |
| ADediting_1536399 | chr14_23029786_- | SINE | Alu | Name=AluY |
| ADediting_1536400 | chr14_23030723_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536401 | chr14_23031989_- | SINE | Alu | Name=AluSx |
| ADediting_1536402 | chr14_23032032_- | SINE | Alu | Name=AluSx |
| ADediting_1536403 | chr14_23032201_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536404 | chr14_23032253_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536405 | chr14_23032309_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536406 | chr14_23032382_- | SINE | Alu | Name=AluSq2 |
| ADediting_1536407 | chr14_23032942_- | SINE | Alu | Name=AluSx1 |
| ADediting_1536408 | chr14_23033012_- | SINE | Alu | Name=AluSx1 |
| ADediting_1536409 | chr14_23033085_- | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for PSMB5 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for PSMB5 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for PSMB5 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for PSMB5 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000361611.11 | PSMB5-202 | hsa-miR-5585-3p | chr14 | 23025856 | 23025863 | 8mer-1a | 23025856 | 23025876 | 147 | -14.55 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000361611.11 | PSMB5-202 | hsa-miR-5585-3p | chr14 | 23025864 | 23025870 | 7mer-m8 | 23025856 | 23025876 | 147 | -14.55 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000361611.11 | PSMB5-202 | hsa-miR-5585-3p | chr14 | 23025864 | 23025870 | 7mer-m8 | 23025863 | 23025883 | 144 | -10.75 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000460922.2 | PSMB5-204 | hsa-miR-5585-3p | chr14 | 23025864 | 23025870 | 7mer-m8 | 23025863 | 23025883 | 144 | -10.75 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000460922.2 | PSMB5-204 | hsa-miR-5585-3p | chr14 | 23026194 | 23026200 | 7mer-m8 | 23026193 | 23026214 | 144 | -18.88 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000493471.2 | PSMB5-205 | hsa-miR-5585-3p | chr14 | 23025864 | 23025870 | 7mer-m8 | 23025863 | 23025883 | 144 | -10.75 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000100804.19 | ENST00000493471.2 | PSMB5-205 | hsa-miR-5585-3p | chr14 | 23026194 | 23026200 | 7mer-m8 | 23026193 | 23026214 | 144 | -18.88 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for PSMB5 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for PSMB5 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_420837 | chr14_23018625_- | 0.191759062111024 | 0.0743390269917881 | 0.323940281088896 | -0.0562061200869819 | 4.34289339933692e-21 | 0.500841861402688 |
| DLPFC | ADediting_420856 | chr14_23026578_- | 0.0149723279551365 | 0.138083061796031 | 0.449766464181682 | 0.0430809094515393 | 3.90463587009024e-17 | 0.453560830902836 |
| DLPFC | ADediting_420857 | chr14_23026587_- | 0.00240747307954994 | 0.171772393756559 | 0.554551588974851 | 0.0336904740432689 | 1.98024225285071e-14 | 0.416385769939128 |
| DLPFC | ADediting_420873 | chr14_23026820_- | 0.0312593806649091 | 0.122359376623758 | 0.352451120707898 | 0.0529886214855728 | 7.28868372474784e-14 | 0.407993997244683 |
| DLPFC | ADediting_420875 | chr14_23026826_- | 0.0530130606369489 | 0.11000076398314 | 0.539590135294533 | 0.0349712641755583 | 4.92225904712565e-16 | 0.438981581450325 |
| DLPFC | ADediting_420876 | chr14_23026838_- | 0.0155423418015491 | 0.137320871986384 | 0.271351059137027 | 0.0626650664046463 | 1.36686762823309e-16 | 0.446439921767861 |
| DLPFC | ADediting_420877 | chr14_23026848_- | 0.178686402753642 | 0.0765772668423171 | 0.472724471323919 | 0.0409309395558014 | 6.85882371885849e-09 | 0.321611611172005 |
| DLPFC | ADediting_420878 | chr14_23026880_- | 0.256453633645957 | 0.0646467697499613 | 0.839828145412017 | -0.0115254431492222 | 1.79698412326245e-16 | 0.444862614337695 |
| DLPFC | ADediting_420881 | chr14_23026999_- | 0.0162053259311106 | 0.136464568410597 | 0.525347198149679 | 0.036207087348847 | 1.11227404387217e-08 | 0.317315536325967 |
| DLPFC | ADediting_420885 | chr14_23027193_- | 0.0467447467067922 | 0.113039610488952 | 0.905620708432211 | -0.00676122515264399 | 3.74786164563295e-18 | 0.466449381807717 |
| DLPFC | ADediting_420888 | chr14_23027269_- | 0.0110876804464213 | 0.144086499944939 | 0.675197690721587 | 0.0238921548517787 | 2.75356078035261e-16 | 0.442385632117977 |
| CER | ADediting_420901 | chr14_23029619_- | 4.05492669527018e-05 | 0.328515876129569 | 3.72737943743287e-05 | 0.329983474142442 | 0.243326019434794 | 0.0958440723328381 |
| CER | ADediting_420908 | chr14_23029675_- | 0.000307520200679716 | 0.290705918937848 | 0.000116584288783712 | 0.309443407219279 | 0.658950393581501 | -0.036329128405559 |
| DLPFC | ADediting_420928 | chr14_23030081_- | 0.00208545798733523 | 0.174172002395798 | 0.291131156520799 | 0.0601451951362906 | 1.53569615041295e-12 | 0.387392936298365 |
| DLPFC | ADediting_420946 | chr14_23030755_- | 0.00451762054860674 | 0.160874152643271 | 0.263622877409468 | 0.0636835013689226 | 4.0326890651667e-13 | 0.396607303820307 |
| DLPFC | ADediting_420950 | chr14_23030804_- | 0.0735586743984779 | 0.101775282856719 | 0.654189962802405 | 0.0255408246058762 | 3.65841364444027e-13 | 0.397267462358772 |
| DLPFC | ADediting_420951 | chr14_23030814_- | 0.16117822550463 | 0.0797736528025261 | 0.62702338026848 | 0.027705065408943 | 4.45022014913311e-09 | 0.325399234914365 |
| DLPFC | ADediting_420959 | chr14_23030873_- | 0.000162853095093202 | 0.212562229103243 | 0.00871586907376618 | 0.148747757649414 | 2.41789181199586e-09 | 0.330653757762628 |
| DLPFC | ADediting_420965 | chr14_23031909_- | 0.000764701130096751 | 0.19015553631332 | 0.0261863385231468 | 0.126286911279467 | 7.05208575900692e-09 | 0.321366509779534 |
| CER | ADediting_420965 | chr14_23031909_- | 0.000571542824922336 | 0.27802394253228 | 5.19626533008475e-05 | 0.324150439514996 | 0.119225736736509 | 0.127759631732481 |
| DLPFC | ADediting_420966 | chr14_23031917_- | 0.000994571481531624 | 0.186092224750353 | 0.0520408527769284 | 0.110451744550349 | 4.04450119961189e-10 | 0.345507258431438 |
| CER | ADediting_420966 | chr14_23031917_- | 5.82864774671408e-05 | 0.322106157484275 | 0.00119513268066815 | 0.262100155309337 | 0.625448748053878 | 0.0401766843547817 |
| DLPFC | ADediting_420967 | chr14_23031923_- | 0.00384066913918553 | 0.163747313891117 | 0.0876729078509546 | 0.0971595848680912 | 4.60445605641025e-09 | 0.32510280312317 |
| CER | ADediting_420968 | chr14_23031926_- | 1.37807326377495e-05 | 0.346780441893363 | 4.96204551210668e-05 | 0.324967332519432 | 0.698601571634576 | -0.0318740788925029 |
| CER | ADediting_420975 | chr14_23031988_- | 2.58941989526227e-06 | 0.373006980413416 | 1.19615770237589e-06 | 0.384386908276391 | 0.293099869780653 | 0.086404168342708 |
| CER | ADediting_420978 | chr14_23032013_- | 3.48656385703235e-07 | 0.401710047410241 | 1.18496172475392e-05 | 0.349246651305017 | 0.05600123430072 | 0.156381431850385 |
| DLPFC | ADediting_420988 | chr14_23032282_- | 0.000828342507062801 | 0.188928349076641 | 0.0302806019495041 | 0.123072328621257 | 1.43807098124352e-14 | 0.418410621090834 |
| DLPFC | ADediting_420990 | chr14_23032312_- | 0.027474430845993 | 0.125231685591743 | 0.489470113976859 | 0.0393987046865655 | 3.40261491586884e-13 | 0.397757785163556 |
| DLPFC | ADediting_420991 | chr14_23032319_- | 0.0349425638257152 | 0.119836607130931 | 0.307638945126242 | 0.0581286461842385 | 2.74323269248738e-10 | 0.348631016919108 |
| DLPFC | ADediting_420992 | chr14_23032322_- | 0.0222200950685458 | 0.129843558736503 | 0.218738389601755 | 0.0700501915233415 | 4.62699105354125e-09 | 0.325060299453997 |
| DLPFC | ADediting_420994 | chr14_23032335_- | 0.0236646484121911 | 0.128489061325466 | 0.246999786926694 | 0.0659459006495723 | 1.47322287533988e-10 | 0.353562793639925 |
| DLPFC | ADediting_420995 | chr14_23032336_- | 0.0657400711712585 | 0.104651482892578 | 0.480752216749789 | 0.040192788533654 | 4.10371028688435e-09 | 0.326103227679011 |
| DLPFC | ADediting_420997 | chr14_23032384_- | 0.00501531016806083 | 0.159000101046556 | 0.102692840906819 | 0.0928625322587304 | 1.19312936486304e-09 | 0.336615525261132 |
| DLPFC | ADediting_420999 | chr14_23032392_- | 0.000991393944630638 | 0.186142198080321 | 0.0776846574404476 | 0.100356737352843 | 2.20138306840535e-10 | 0.350386459703398 |
| TCX | ADediting_420999 | chr14_23032392_- | 0.28595404270046 | 0.0876890120721213 | 0.234043306552999 | -0.0977485735484516 | 0.000176855543079135 | 0.301547789102749 |
| DLPFC | ADediting_421000 | chr14_23032405_- | 0.000733790354636682 | 0.190786027423693 | 0.0841612537427926 | 0.0982484946194137 | 7.6963760698222e-09 | 0.320593924667072 |
| DLPFC | ADediting_421001 | chr14_23032431_- | 0.000526865388362341 | 0.195778163597106 | 0.111968855477333 | 0.0904524408615921 | 1.03923883582566e-12 | 0.39011368472785 |
| DLPFC | ADediting_421003 | chr14_23032634_- | 0.282333520884164 | 0.0612512160486834 | 0.853812966158953 | -0.0105071707677115 | 1.71694565396714e-10 | 0.35235621321148 |
| DLPFC | ADediting_421007 | chr14_23032723_- | 0.166357306572696 | 0.0788021862615525 | 0.828053419496841 | -0.0123856246384922 | 3.62351082374513e-12 | 0.381321856523271 |
| DLPFC | ADediting_421015 | chr14_23032800_- | 0.0434094827985712 | 0.114798253787193 | 0.939523402361668 | 0.0043265217210778 | 1.41977922652996e-16 | 0.446221447219582 |
| DLPFC | ADediting_421016 | chr14_23032801_- | 0.172324360147633 | 0.0777105745432969 | 0.297074387184429 | -0.0594106364234698 | 2.07575362897468e-21 | 0.504372843070725 |
| DLPFC | ADediting_421017 | chr14_23032803_- | 0.00710709538205546 | 0.15260310055326 | 0.771845302130186 | 0.0165344045244279 | 1.90143125676808e-11 | 0.369229574357655 |
| DLPFC | ADediting_421019 | chr14_23032864_- | 0.404583996724565 | 0.0475026534797365 | 0.640229367128293 | -0.0266482315972291 | 6.0964138547564e-12 | 0.377580524872602 |
| DLPFC | ADediting_421020 | chr14_23032869_- | 0.0172018089847667 | 0.135233447812228 | 0.636616865873256 | 0.0269364091646548 | 5.83636182662091e-17 | 0.451294537064829 |
| DLPFC | ADediting_421026 | chr14_23033031_- | 0.00165562141661261 | 0.177967053962447 | 0.121432073667876 | 0.0881501808794509 | 5.10478675065164e-08 | 0.303310393327788 |
| DLPFC | ADediting_421027 | chr14_23033071_- | 1.75136134941812e-05 | 0.241269654478455 | 0.0144419324625979 | 0.138815477551538 | 4.29142685855612e-09 | 0.325715006920122 |
| TCX | ADediting_421027 | chr14_23033071_- | 0.693258164609254 | -0.0324687979998768 | 0.0233960749129329 | -0.185038522925772 | 2.06910425442695e-05 | 0.340036255953527 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.62288694532211e-75 | 0.816672302015948 | 5.90704095228344e-66 | 0.784773761658434 | 9.34630200362427e-11 | 0.357119418906408 |
| AC | 5.0506334112867e-72 | 0.853098355421691 | 2.86923023090473e-48 | 0.7597642125678 | 1.48315789952239e-16 | 0.490729571683484 |
| PCC | 6.20642587473343e-28 | 0.686274098768766 | 7.32862823516678e-29 | 0.694789002785044 | 0.0395920100308257 | 0.149055787626145 |
| CER | 2.90974661503984e-15 | 0.587021166660033 | 2.20424671449382e-12 | 0.53297204176943 | 0.0077044631456648 | 0.216795903929066 |
| TCX | 7.92388061311557e-34 | 0.794177873147519 | 1.4703899560404e-16 | 0.608450605699904 | 0.168203984008136 | 0.113097817196572 |
| FP | 4.25844276681579e-08 | 0.396555425542719 | 4.4163195259326e-10 | 0.445965754858039 | 0.0737272175287611 | -0.13437706578134 |
| IFG | 0.000788284662691584 | 0.627388584045508 | 0.00390498994589739 | 0.555971452605563 | 0.334484978270405 | -0.20134546817487 |
| PG | 7.01155306439172e-10 | 0.432571015171788 | 6.40691642682148e-13 | 0.495573562095211 | 0.0489514044258578 | -0.144590303848716 |
| STG | 2.48724432122548e-09 | 0.594502000632812 | 1.54491149938634e-07 | 0.535378512503912 | 0.0673095116965419 | -0.200597318104476 |
Top |
Relation with AD stages for PSMB5 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| PG | 5.01425636066168e-06 | -0.327589857352888 |
Top |
RelatedDrugs for PSMB5 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
| PSMB5 | P28074 | DB00188 | Bortezomib | Proteasome subunit beta type-5 | small molecule | approved|investigational |
| PSMB5 | P28074 | DB08889 | Carfilzomib | Proteasome subunit beta type-5 | small molecule | approved|investigational |
Top |
RelatedDiseases for PSMB5 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| PSMB5 | C0151744 | Myocardial Ischemia | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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