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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for GPCPD1

check button Gene summary
Gene informationGene symbol

GPCPD1

Gene ID

56261

Gene nameglycerophosphocholine phosphodiesterase 1
SynonymsEDI3|GDE5|GDPD6|PREI4
Cytomap

20p12.3

Type of geneprotein-coding
Descriptionglycerophosphocholine phosphodiesterase GPCPD1endometrial differential 3glycerophosphocholine phosphodiesterase GDE1 homologglycerophosphodiester phosphodiesterase 5preimplantation protein 4putative glycerophosphocholine phosphodiesterase GPCPD1puta
Modification date20200313
UniProtAcc

Q9NPB8,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for GPCPD1

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_946509(5555293, -), ADediting_946510(5555302, -), ADediting_946511(5555354, -), ADediting_946512(5555356, -), ADediting_946513(5555456, -), ADediting_946514(5555457, -), ADediting_946515(5555463, -), ADediting_946516(5555495, -), ADediting_946517(5555600, -), ADediting_946518(5555614, -), ADediting_946519(5555785, -), ADediting_946520(5555791, -), ADediting_946521(5555815, -), ADediting_946522(5556343, -), ADediting_946523(5556370, -), ADediting_946524(5556379, -), ADediting_946525(5556388, -), ADediting_946526(5556399, -), ADediting_946527(5556433, -), ADediting_946528(5556476, -), ADediting_946529(5556837, -), ADediting_946530(5563079, -), ADediting_946531(5563094, -), ADediting_946532(5563147, -), ADediting_946533(5564576, -), ADediting_946534(5564593, -), ADediting_946535(5564670, -), ADediting_946536(5564689, -), ADediting_946537(5564779, -), ADediting_946538(5564784, -), ADediting_946539(5571674, -), ADediting_946540(5571743, -), ADediting_946541(5571833, -), ADediting_946542(5571846, -), ADediting_946543(5572947, -), ADediting_946544(5572950, -), ADediting_946545(5573012, -), ADediting_946546(5573016, -), ADediting_946547(5573031, -), ADediting_946548(5573249, -), ADediting_946549(5573304, -), ADediting_946550(5573305, -), ADediting_946551(5573328, -), ADediting_946552(5573622, -), ADediting_946553(5573631, -), ADediting_946554(5573643, -), ADediting_946555(5573686, -), ADediting_946556(5573709, -), ADediting_946557(5579430, -), ADediting_946558(5579459, -), ADediting_946559(5579485, -), ADediting_946560(5579486, -), ADediting_946561(5579621, -), ADediting_946562(5579627, -), ADediting_946563(5580614, -), ADediting_946564(5580663, -), ADediting_946565(5581062, -), ADediting_946566(5581073, -), ADediting_946567(5581119, -), ADediting_946568(5581150, -), ADediting_946569(5581151, -), ADediting_946570(5587441, -), ADediting_946571(5587452, -), ADediting_946572(5587453, -), ADediting_946573(5587460, -), ADediting_946574(5587464, -), ADediting_946575(5587470, -), ADediting_946576(5587473, -), ADediting_946577(5587479, -), ADediting_946578(5587483, -), ADediting_946579(5587492, -), ADediting_946580(5587496, -), ADediting_946581(5587500, -), ADediting_946582(5587505, -), ADediting_946583(5587516, -), ADediting_946584(5587535, -), ADediting_946585(5587536, -), ADediting_946586(5587537, -), ADediting_946587(5587538, -), ADediting_946588(5587539, -), ADediting_946589(5587541, -), ADediting_946590(5587543, -), ADediting_946591(5587544, -), ADediting_946592(5587546, -), ADediting_946593(5587547, -), ADediting_946594(5587550, -), ADediting_946595(5587556, -), ADediting_946596(5587562, -), ADediting_946597(5587569, -), ADediting_946598(5587571, -), ADediting_946599(5587572, -), ADediting_946600(5587581, -), ADediting_946601(5587586, -), ADediting_946602(5587592, -), ADediting_946603(5587595, -), ADediting_946604(5587600, -), ADediting_946605(5587603, -), ADediting_946606(5587622, -), ADediting_946607(5587630, -), ADediting_946608(5587633, -), ADediting_946609(5587638, -), ADediting_946610(5587639, -), ADediting_946611(5587645, -), ADediting_946612(5587655, -), ADediting_946613(5587657, -), ADediting_946614(5588242, -), ADediting_946615(5588260, -), ADediting_946616(5588261, -), ADediting_946617(5588287, -), ADediting_946618(5588302, -), ADediting_946619(5588313, -), ADediting_946620(5588325, -), ADediting_946621(5588339, -), ADediting_946622(5588342, -), ADediting_946623(5588348, -), ADediting_946624(5588405, -), ADediting_946625(5588418, -), ADediting_946626(5588419, -), ADediting_946627(5588562, -), ADediting_946628(5588633, -), ADediting_946629(5588642, -), ADediting_946630(5588659, -), ADediting_946631(5588709, -), ADediting_946632(5588717, -), ADediting_946633(5588749, -), ADediting_946634(5588773, -), ADediting_946635(5588778, -), ADediting_946636(5588787, -), ADediting_946637(5589355, -), ADediting_946638(5589367, -), ADediting_946639(5589368, -), ADediting_946640(5589407, -), ADediting_946641(5589408, -), ADediting_946642(5589439, -), ADediting_946643(5589446, -), ADediting_946644(5589449, -), ADediting_946645(5589480, -), ADediting_946646(5589484, -), ADediting_946647(5589490, -), ADediting_946648(5589500, -), ADediting_946649(5589503, -), ADediting_946650(5589512, -), ADediting_946651(5589525, -), ADediting_946652(5589529, -), ADediting_946653(5589530, -), ADediting_946654(5589536, -), ADediting_946655(5589550, -), ADediting_946656(5589600, -), ADediting_946657(5590278, -), ADediting_946658(5590284, -), ADediting_946659(5590298, -), ADediting_946660(5590336, -), ADediting_946661(5590337, -), ADediting_946662(5590338, -), ADediting_946663(5590349, -), ADediting_946664(5590353, -), ADediting_946665(5590369, -), ADediting_946666(5590375, -), ADediting_946667(5590378, -), ADediting_946668(5590388, -), ADediting_946669(5590422, -), ADediting_946670(5590432, -), ADediting_946671(5590435, -), ADediting_946672(5590443, -), ADediting_946673(5590460, -), ADediting_946674(5590505, -), ADediting_946675(5590541, -), ADediting_946676(5599293, -), ADediting_946677(5599315, -), ADediting_946678(5599354, -), ADediting_946679(5599366, -), ADediting_946680(5599379, -), ADediting_946681(5599384, -), ADediting_946682(5599385, -), ADediting_946683(5599404, -), ADediting_946684(5599410, -), ADediting_946685(5599431, -), ADediting_946686(5599441, -), ADediting_946687(5599597, -), ADediting_946688(5599631, -), ADediting_946689(5599651, -), ADediting_946690(5599652, -), ADediting_946691(5599666, -), ADediting_946692(5599692, -), ADediting_946693(5599719, -), ADediting_946694(5599761, -), ADediting_946695(5599765, -), ADediting_946696(5599771, -), ADediting_946697(5599772, -), ADediting_946698(5599780, -), ADediting_946699(5599785, -), ADediting_946700(5599795, -), ADediting_946701(5599803, -), ADediting_946702(5599804, -), ADediting_946703(5599824, -), ADediting_946704(5599825, -), ADediting_946705(5600338, -), ADediting_946706(5600432, -), ADediting_946707(5600454, -), ADediting_946708(5600463, -), ADediting_946709(5600471, -), ADediting_946710(5600472, -), ADediting_946711(5600589, -), ADediting_946712(5600590, -), ADediting_946713(5600688, -), ADediting_946714(5600710, -), ADediting_946715(5600719, -), ADediting_946716(5600732, -), ADediting_946717(5601136, -), ADediting_946718(5601246, -), ADediting_946719(5601255, -), ADediting_946720(5601256, -), ADediting_946721(5601262, -), ADediting_946722(5601267, -), ADediting_946723(5601268, -), ADediting_946724(5601451, -), ADediting_946725(5601454, -), ADediting_946726(5601484, -), ADediting_946727(5601497, -), ADediting_946728(5601507, -), ADediting_946729(5601533, -), ADediting_946730(5601542, -), ADediting_946731(5601551, -), ADediting_946732(5601562, -), ADediting_946733(5601563, -), ADediting_946734(5601569, -), ADediting_946735(5601572, -), ADediting_946736(5601601, -), ADediting_946737(5601619, -), ADediting_946738(5601625, -), ADediting_946739(5601628, -), ADediting_946740(5601641, -), ADediting_946741(5601642, -), ADediting_946742(5601660, -), ADediting_946743(5602766, -), ADediting_946744(5602767, -), ADediting_946745(5602780, -), ADediting_946746(5602786, -), ADediting_946747(5602800, -), ADediting_946748(5602920, -), ADediting_946749(5602941, -), ADediting_946750(5602944, -), ADediting_946751(5603090, -), ADediting_946752(5603193, -), ADediting_946753(5603206, -), ADediting_946754(5603210, -), ADediting_946755(5603241, -), ADediting_946756(5603246, -), ADediting_946757(5603262, -), ADediting_946758(5603812, -), ADediting_946759(5603839, -), ADediting_946760(5603875, -), ADediting_946761(5603884, -), ADediting_946762(5603885, -), ADediting_946763(5603911, -), ADediting_946764(5603926, -), ADediting_946765(5603935, -), ADediting_946766(5603960, -), ADediting_946767(5603965, -), ADediting_946768(5604019, -), ADediting_946769(5604020, -), ADediting_946770(5604036, -), ADediting_946771(5604057, -), ADediting_1567535(5562431, -), ADediting_1567536(5562465, -), ADediting_1567537(5564705, -), ADediting_1567538(5564725, -), ADediting_1567539(5564727, -), ADediting_1567540(5571847, -), ADediting_1567541(5571852, -), ADediting_1567542(5573695, -), ADediting_1567543(5587616, -), ADediting_1567544(5589455, -), ADediting_1567545(5589477, -), ADediting_1567546(5590281, -), ADediting_1567547(5590306, -), ADediting_1567548(5601036, -), ADediting_1567549(5601058, -), ADediting_1641252(5555738, -), ADediting_1641253(5564680, -), ADediting_1641254(5564826, -), ADediting_1641255(5573010, -), ADediting_1641256(5573222, -), ADediting_1641257(5573661, -), ADediting_1641258(5573681, -), ADediting_1641259(5579090, -), ADediting_1641260(5587421, -), ADediting_1641261(5587545, -), ADediting_1641262(5587563, -), ADediting_1641263(5587647, -), ADediting_1641264(5588383, -), ADediting_1641265(5588429, -), ADediting_1641266(5588676, -), ADediting_1641267(5588716, -), ADediting_1641268(5589420, -), ADediting_1641269(5589463, -), ADediting_1641270(5590499, -), ADediting_1641271(5599680, -), ADediting_1641272(5599693, -),

Top

RNA editing positional annotations for GPCPD1 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_946509chr20_5555293_-intronic
ADediting_946510chr20_5555302_-intronic
ADediting_946511chr20_5555354_-intronic
ADediting_946512chr20_5555356_-intronic
ADediting_946513chr20_5555456_-intronic
ADediting_946514chr20_5555457_-intronic
ADediting_946515chr20_5555463_-intronic
ADediting_946516chr20_5555495_-intronic
ADediting_946517chr20_5555600_-intronic
ADediting_946518chr20_5555614_-intronic
ADediting_946519chr20_5555785_-intronic
ADediting_946520chr20_5555791_-intronic
ADediting_946521chr20_5555815_-intronic
ADediting_946522chr20_5556343_-intronic
ADediting_946523chr20_5556370_-intronic
ADediting_946524chr20_5556379_-intronic
ADediting_946525chr20_5556388_-intronic
ADediting_946526chr20_5556399_-intronic
ADediting_946527chr20_5556433_-intronic
ADediting_946528chr20_5556476_-intronic
ADediting_946529chr20_5556837_-intronic
ADediting_946530chr20_5563079_-intronic
ADediting_946531chr20_5563094_-intronic
ADediting_946532chr20_5563147_-intronic
ADediting_946533chr20_5564576_-intronic
ADediting_946534chr20_5564593_-intronic
ADediting_946535chr20_5564670_-intronic
ADediting_946536chr20_5564689_-intronic
ADediting_946537chr20_5564779_-intronic
ADediting_946538chr20_5564784_-intronic
ADediting_946539chr20_5571674_-intronic
ADediting_946540chr20_5571743_-intronic
ADediting_946541chr20_5571833_-intronic
ADediting_946542chr20_5571846_-intronic
ADediting_946543chr20_5572947_-intronic
ADediting_946544chr20_5572950_-intronic
ADediting_946545chr20_5573012_-intronic
ADediting_946546chr20_5573016_-intronic
ADediting_946547chr20_5573031_-intronic
ADediting_946548chr20_5573249_-intronic
ADediting_946549chr20_5573304_-intronic
ADediting_946550chr20_5573305_-intronic
ADediting_946551chr20_5573328_-intronic
ADediting_946552chr20_5573622_-intronic
ADediting_946553chr20_5573631_-intronic
ADediting_946554chr20_5573643_-intronic
ADediting_946555chr20_5573686_-intronic
ADediting_946556chr20_5573709_-intronic
ADediting_946557chr20_5579430_-intronic
ADediting_946558chr20_5579459_-intronic
ADediting_946559chr20_5579485_-intronic
ADediting_946560chr20_5579486_-intronic
ADediting_946561chr20_5579621_-intronic
ADediting_946562chr20_5579627_-intronic
ADediting_946563chr20_5580614_-intronic
ADediting_946564chr20_5580663_-intronic
ADediting_946565chr20_5581062_-intronic
ADediting_946566chr20_5581073_-intronic
ADediting_946567chr20_5581119_-intronic
ADediting_946568chr20_5581150_-intronic
ADediting_946569chr20_5581151_-intronic
ADediting_946570chr20_5587441_-intronic
ADediting_946571chr20_5587452_-intronic
ADediting_946572chr20_5587453_-intronic
ADediting_946573chr20_5587460_-intronic
ADediting_946574chr20_5587464_-intronic
ADediting_946575chr20_5587470_-intronic
ADediting_946576chr20_5587473_-intronic
ADediting_946577chr20_5587479_-intronic
ADediting_946578chr20_5587483_-intronic
ADediting_946579chr20_5587492_-intronic
ADediting_946580chr20_5587496_-intronic
ADediting_946581chr20_5587500_-intronic
ADediting_946582chr20_5587505_-intronic
ADediting_946583chr20_5587516_-intronic
ADediting_946584chr20_5587535_-intronic
ADediting_946585chr20_5587536_-intronic
ADediting_946586chr20_5587537_-intronic
ADediting_946587chr20_5587538_-intronic
ADediting_946588chr20_5587539_-intronic
ADediting_946589chr20_5587541_-intronic
ADediting_946590chr20_5587543_-intronic
ADediting_946591chr20_5587544_-intronic
ADediting_946592chr20_5587546_-intronic
ADediting_946593chr20_5587547_-intronic
ADediting_946594chr20_5587550_-intronic
ADediting_946595chr20_5587556_-intronic
ADediting_946596chr20_5587562_-intronic
ADediting_946597chr20_5587569_-intronic
ADediting_946598chr20_5587571_-intronic
ADediting_946599chr20_5587572_-intronic
ADediting_946600chr20_5587581_-intronic
ADediting_946601chr20_5587586_-intronic
ADediting_946602chr20_5587592_-intronic
ADediting_946603chr20_5587595_-intronic
ADediting_946604chr20_5587600_-intronic
ADediting_946605chr20_5587603_-intronic
ADediting_946606chr20_5587622_-intronic
ADediting_946607chr20_5587630_-intronic
ADediting_946608chr20_5587633_-intronic
ADediting_946609chr20_5587638_-intronic
ADediting_946610chr20_5587639_-intronic
ADediting_946611chr20_5587645_-intronic
ADediting_946612chr20_5587655_-intronic
ADediting_946613chr20_5587657_-intronic
ADediting_946614chr20_5588242_-intronic
ADediting_946615chr20_5588260_-intronic
ADediting_946616chr20_5588261_-intronic
ADediting_946617chr20_5588287_-intronic
ADediting_946618chr20_5588302_-intronic
ADediting_946619chr20_5588313_-intronic
ADediting_946620chr20_5588325_-intronic
ADediting_946621chr20_5588339_-intronic
ADediting_946622chr20_5588342_-intronic
ADediting_946623chr20_5588348_-intronic
ADediting_946624chr20_5588405_-intronic
ADediting_946625chr20_5588418_-intronic
ADediting_946626chr20_5588419_-intronic
ADediting_946627chr20_5588562_-intronic
ADediting_946628chr20_5588633_-intronic
ADediting_946629chr20_5588642_-intronic
ADediting_946630chr20_5588659_-intronic
ADediting_946631chr20_5588709_-intronic
ADediting_946632chr20_5588717_-intronic
ADediting_946633chr20_5588749_-intronic
ADediting_946634chr20_5588773_-intronic
ADediting_946635chr20_5588778_-intronic
ADediting_946636chr20_5588787_-intronic
ADediting_946637chr20_5589355_-intronic
ADediting_946638chr20_5589367_-intronic
ADediting_946639chr20_5589368_-intronic
ADediting_946640chr20_5589407_-intronic
ADediting_946641chr20_5589408_-intronic
ADediting_946642chr20_5589439_-intronic
ADediting_946643chr20_5589446_-intronic
ADediting_946644chr20_5589449_-intronic
ADediting_946645chr20_5589480_-intronic
ADediting_946646chr20_5589484_-intronic
ADediting_946647chr20_5589490_-intronic
ADediting_946648chr20_5589500_-intronic
ADediting_946649chr20_5589503_-intronic
ADediting_946650chr20_5589512_-intronic
ADediting_946651chr20_5589525_-intronic
ADediting_946652chr20_5589529_-intronic
ADediting_946653chr20_5589530_-intronic
ADediting_946654chr20_5589536_-intronic
ADediting_946655chr20_5589550_-intronic
ADediting_946656chr20_5589600_-intronic
ADediting_946657chr20_5590278_-intronic
ADediting_946658chr20_5590284_-intronic
ADediting_946659chr20_5590298_-intronic
ADediting_946660chr20_5590336_-intronic
ADediting_946661chr20_5590337_-intronic
ADediting_946662chr20_5590338_-intronic
ADediting_946663chr20_5590349_-intronic
ADediting_946664chr20_5590353_-intronic
ADediting_946665chr20_5590369_-intronic
ADediting_946666chr20_5590375_-intronic
ADediting_946667chr20_5590378_-intronic
ADediting_946668chr20_5590388_-intronic
ADediting_946669chr20_5590422_-intronic
ADediting_946670chr20_5590432_-intronic
ADediting_946671chr20_5590435_-intronic
ADediting_946672chr20_5590443_-intronic
ADediting_946673chr20_5590460_-intronic
ADediting_946674chr20_5590505_-intronic
ADediting_946675chr20_5590541_-intronic
ADediting_946676chr20_5599293_-intronic
ADediting_946677chr20_5599315_-intronic
ADediting_946678chr20_5599354_-intronic
ADediting_946679chr20_5599366_-intronic
ADediting_946680chr20_5599379_-intronic
ADediting_946681chr20_5599384_-intronic
ADediting_946682chr20_5599385_-intronic
ADediting_946683chr20_5599404_-intronic
ADediting_946684chr20_5599410_-intronic
ADediting_946685chr20_5599431_-intronic
ADediting_946686chr20_5599441_-intronic
ADediting_946687chr20_5599597_-intronic
ADediting_946688chr20_5599631_-intronic
ADediting_946689chr20_5599651_-intronic
ADediting_946690chr20_5599652_-intronic
ADediting_946691chr20_5599666_-intronic
ADediting_946692chr20_5599692_-intronic
ADediting_946693chr20_5599719_-intronic
ADediting_946694chr20_5599761_-intronic
ADediting_946695chr20_5599765_-intronic
ADediting_946696chr20_5599771_-intronic
ADediting_946697chr20_5599772_-intronic
ADediting_946698chr20_5599780_-intronic
ADediting_946699chr20_5599785_-intronic
ADediting_946700chr20_5599795_-intronic
ADediting_946701chr20_5599803_-intronic
ADediting_946702chr20_5599804_-intronic
ADediting_946703chr20_5599824_-intronic
ADediting_946704chr20_5599825_-intronic
ADediting_946705chr20_5600338_-intronic
ADediting_946706chr20_5600432_-intronic
ADediting_946707chr20_5600454_-intronic
ADediting_946708chr20_5600463_-intronic
ADediting_946709chr20_5600471_-intronic
ADediting_946710chr20_5600472_-intronic
ADediting_946711chr20_5600589_-intronic
ADediting_946712chr20_5600590_-intronic
ADediting_946713chr20_5600688_-intronic
ADediting_946714chr20_5600710_-intronic
ADediting_946715chr20_5600719_-intronic
ADediting_946716chr20_5600732_-intronic
ADediting_946717chr20_5601136_-intronic
ADediting_946718chr20_5601246_-intronic
ADediting_946719chr20_5601255_-intronic
ADediting_946720chr20_5601256_-intronic
ADediting_946721chr20_5601262_-intronic
ADediting_946722chr20_5601267_-intronic
ADediting_946723chr20_5601268_-intronic
ADediting_946724chr20_5601451_-intronic
ADediting_946725chr20_5601454_-intronic
ADediting_946726chr20_5601484_-intronic
ADediting_946727chr20_5601497_-intronic
ADediting_946728chr20_5601507_-intronic
ADediting_946729chr20_5601533_-intronic
ADediting_946730chr20_5601542_-intronic
ADediting_946731chr20_5601551_-intronic
ADediting_946732chr20_5601562_-intronic
ADediting_946733chr20_5601563_-intronic
ADediting_946734chr20_5601569_-intronic
ADediting_946735chr20_5601572_-intronic
ADediting_946736chr20_5601601_-intronic
ADediting_946737chr20_5601619_-intronic
ADediting_946738chr20_5601625_-intronic
ADediting_946739chr20_5601628_-intronic
ADediting_946740chr20_5601641_-intronic
ADediting_946741chr20_5601642_-intronic
ADediting_946742chr20_5601660_-intronic
ADediting_946743chr20_5602766_-intronic
ADediting_946744chr20_5602767_-intronic
ADediting_946745chr20_5602780_-intronic
ADediting_946746chr20_5602786_-intronic
ADediting_946747chr20_5602800_-intronic
ADediting_946748chr20_5602920_-intronic
ADediting_946749chr20_5602941_-intronic
ADediting_946750chr20_5602944_-intronic
ADediting_946751chr20_5603090_-intronic
ADediting_946752chr20_5603193_-intronic
ADediting_946753chr20_5603206_-intronic
ADediting_946754chr20_5603210_-intronic
ADediting_946755chr20_5603241_-intronic
ADediting_946756chr20_5603246_-intronic
ADediting_946757chr20_5603262_-intronic
ADediting_946758chr20_5603812_-intronic
ADediting_946759chr20_5603839_-intronic
ADediting_946760chr20_5603875_-intronic
ADediting_946761chr20_5603884_-intronic
ADediting_946762chr20_5603885_-intronic
ADediting_946763chr20_5603911_-intronic
ADediting_946764chr20_5603926_-intronic
ADediting_946765chr20_5603935_-intronic
ADediting_946766chr20_5603960_-intronic
ADediting_946767chr20_5603965_-intronic
ADediting_946768chr20_5604019_-intronic
ADediting_946769chr20_5604020_-intronic
ADediting_946770chr20_5604036_-intronic
ADediting_946771chr20_5604057_-intronic
ADediting_1567535chr20_5562431_-intronic
ADediting_1567536chr20_5562465_-intronic
ADediting_1567537chr20_5564705_-intronic
ADediting_1567538chr20_5564725_-intronic
ADediting_1567539chr20_5564727_-intronic
ADediting_1567540chr20_5571847_-intronic
ADediting_1567541chr20_5571852_-intronic
ADediting_1567542chr20_5573695_-intronic
ADediting_1567543chr20_5587616_-intronic
ADediting_1567544chr20_5589455_-intronic
ADediting_1567545chr20_5589477_-intronic
ADediting_1567546chr20_5590281_-intronic
ADediting_1567547chr20_5590306_-intronic
ADediting_1567548chr20_5601036_-intronic
ADediting_1567549chr20_5601058_-intronic
ADediting_1641252chr20_5555738_-intronic
ADediting_1641253chr20_5564680_-intronic
ADediting_1641254chr20_5564826_-intronic
ADediting_1641255chr20_5573010_-intronic
ADediting_1641256chr20_5573222_-intronic
ADediting_1641257chr20_5573661_-intronic
ADediting_1641258chr20_5573681_-intronic
ADediting_1641259chr20_5579090_-intronic
ADediting_1641260chr20_5587421_-intronic
ADediting_1641261chr20_5587545_-intronic
ADediting_1641262chr20_5587563_-intronic
ADediting_1641263chr20_5587647_-intronic
ADediting_1641264chr20_5588383_-intronic
ADediting_1641265chr20_5588429_-intronic
ADediting_1641266chr20_5588676_-intronic
ADediting_1641267chr20_5588716_-intronic
ADediting_1641268chr20_5589420_-intronic
ADediting_1641269chr20_5589463_-intronic
ADediting_1641270chr20_5590499_-intronic
ADediting_1641271chr20_5599680_-intronic
ADediting_1641272chr20_5599693_-intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_946509chr20_5555293_-SINEAluName=AluSx
ADediting_946510chr20_5555302_-SINEAluName=AluSx
ADediting_946511chr20_5555354_-SINEAluName=AluSx
ADediting_946512chr20_5555356_-SINEAluName=AluSx
ADediting_946513chr20_5555456_-SINEAluName=AluSx
ADediting_946514chr20_5555457_-SINEAluName=AluSx
ADediting_946515chr20_5555463_-SINEAluName=AluSx
ADediting_946516chr20_5555495_-SINEAluName=AluSx
ADediting_946517chr20_5555600_-SINEAluName=AluSz6
ADediting_946518chr20_5555614_-SINEAluName=AluSz6
ADediting_946519chr20_5555785_-SINEAluName=AluSz6
ADediting_946520chr20_5555791_-SINEAluName=AluSz6
ADediting_946521chr20_5555815_-SINEAluName=AluSz6
ADediting_946522chr20_5556343_-SINEAluName=AluSg
ADediting_946523chr20_5556370_-SINEAluName=AluSg
ADediting_946524chr20_5556379_-SINEAluName=AluSg
ADediting_946525chr20_5556388_-SINEAluName=AluSg
ADediting_946526chr20_5556399_-SINEAluName=AluSg
ADediting_946527chr20_5556433_-SINEAluName=AluSg
ADediting_946528chr20_5556476_-SINEAluName=AluSg
ADediting_946529chr20_5556837_-LINEL2Name=L2a
ADediting_946530chr20_5563079_-SINEAluName=AluY
ADediting_946531chr20_5563094_-SINEAluName=AluY
ADediting_946532chr20_5563147_-SINEAluName=AluY
ADediting_946533chr20_5564576_-SINEAluName=AluJb
ADediting_946534chr20_5564593_-SINEAluName=AluJb
ADediting_946535chr20_5564670_-SINEAluName=AluJb
ADediting_946536chr20_5564689_-SINEAluName=AluJb
ADediting_946537chr20_5564779_-SINEAluName=AluJb
ADediting_946538chr20_5564784_-SINEAluName=AluJb
ADediting_946539chr20_5571674_-SINEAluName=AluSx1
ADediting_946540chr20_5571743_-SINEAluName=AluSx1
ADediting_946541chr20_5571833_-SINEAluName=AluSx1
ADediting_946542chr20_5571846_-SINEAluName=AluSx1
ADediting_946543chr20_5572947_-SINEAluName=AluJr
ADediting_946544chr20_5572950_-SINEAluName=AluJr
ADediting_946545chr20_5573012_-SINEAluName=AluJr
ADediting_946546chr20_5573016_-SINEAluName=AluJr
ADediting_946547chr20_5573031_-SINEAluName=AluJr
ADediting_946548chr20_5573249_-SINEAluName=AluSx
ADediting_946549chr20_5573304_-SINEAluName=AluSx
ADediting_946550chr20_5573305_-SINEAluName=AluSx
ADediting_946551chr20_5573328_-SINEAluName=AluSx
ADediting_946552chr20_5573622_-SINEAluName=AluJb
ADediting_946553chr20_5573631_-SINEAluName=AluJb
ADediting_946554chr20_5573643_-SINEAluName=AluJb
ADediting_946555chr20_5573686_-SINEAluName=AluJb
ADediting_946556chr20_5573709_-SINEAluName=AluJb
ADediting_946557chr20_5579430_-SINEAluName=AluSx1
ADediting_946558chr20_5579459_-SINEAluName=AluSx1
ADediting_946559chr20_5579485_-SINEAluName=AluSx1
ADediting_946560chr20_5579486_-SINEAluName=AluSx1
ADediting_946561chr20_5579621_-SINEAluName=AluSx1
ADediting_946562chr20_5579627_-SINEAluName=AluSx1
ADediting_946563chr20_5580614_-SINEAluName=AluY
ADediting_946564chr20_5580663_-SINEAluName=AluY
ADediting_946565chr20_5581062_-SINEAluName=AluSz
ADediting_946566chr20_5581073_-SINEAluName=AluSz
ADediting_946567chr20_5581119_-SINEAluName=AluSz
ADediting_946568chr20_5581150_-SINEAluName=AluSz
ADediting_946569chr20_5581151_-SINEAluName=AluSz
ADediting_946570chr20_5587441_-SINEAluName=AluSg
ADediting_946571chr20_5587452_-SINEAluName=AluSg
ADediting_946572chr20_5587453_-SINEAluName=AluSg
ADediting_946573chr20_5587460_-SINEAluName=AluSg
ADediting_946574chr20_5587464_-SINEAluName=AluSg
ADediting_946575chr20_5587470_-SINEAluName=AluSg
ADediting_946576chr20_5587473_-SINEAluName=AluSg
ADediting_946577chr20_5587479_-SINEAluName=AluSg
ADediting_946578chr20_5587483_-SINEAluName=AluSg
ADediting_946579chr20_5587492_-SINEAluName=AluSg
ADediting_946580chr20_5587496_-SINEAluName=AluSg
ADediting_946581chr20_5587500_-SINEAluName=AluSg
ADediting_946582chr20_5587505_-SINEAluName=AluSg
ADediting_946583chr20_5587516_-SINEAluName=AluSg
ADediting_946584chr20_5587535_-SINEAluName=AluSg
ADediting_946585chr20_5587536_-SINEAluName=AluSg
ADediting_946586chr20_5587537_-SINEAluName=AluSg
ADediting_946587chr20_5587538_-SINEAluName=AluSg
ADediting_946588chr20_5587539_-SINEAluName=AluSg
ADediting_946589chr20_5587541_-SINEAluName=AluSg
ADediting_946590chr20_5587543_-SINEAluName=AluSg
ADediting_946591chr20_5587544_-SINEAluName=AluSg
ADediting_946592chr20_5587546_-SINEAluName=AluSg
ADediting_946593chr20_5587547_-SINEAluName=AluSg
ADediting_946594chr20_5587550_-SINEAluName=AluSg
ADediting_946595chr20_5587556_-SINEAluName=AluSg
ADediting_946596chr20_5587562_-SINEAluName=AluSg
ADediting_946597chr20_5587569_-SINEAluName=AluSg
ADediting_946598chr20_5587571_-SINEAluName=AluSg
ADediting_946599chr20_5587572_-SINEAluName=AluSg
ADediting_946600chr20_5587581_-SINEAluName=AluSg
ADediting_946601chr20_5587586_-SINEAluName=AluSg
ADediting_946602chr20_5587592_-SINEAluName=AluSg
ADediting_946603chr20_5587595_-SINEAluName=AluSg
ADediting_946604chr20_5587600_-SINEAluName=AluSg
ADediting_946605chr20_5587603_-SINEAluName=AluSg
ADediting_946606chr20_5587622_-SINEAluName=AluSg
ADediting_946607chr20_5587630_-SINEAluName=AluSg
ADediting_946608chr20_5587633_-SINEAluName=AluSg
ADediting_946609chr20_5587638_-SINEAluName=AluSg
ADediting_946610chr20_5587639_-SINEAluName=AluSg
ADediting_946611chr20_5587645_-SINEAluName=AluSg
ADediting_946612chr20_5587655_-SINEAluName=AluSg
ADediting_946613chr20_5587657_-SINEAluName=AluSg
ADediting_946614chr20_5588242_-SINEAluName=AluSz
ADediting_946615chr20_5588260_-SINEAluName=AluSz
ADediting_946616chr20_5588261_-SINEAluName=AluSz
ADediting_946617chr20_5588287_-SINEAluName=AluSz
ADediting_946618chr20_5588302_-SINEAluName=AluSz
ADediting_946619chr20_5588313_-SINEAluName=AluSz
ADediting_946620chr20_5588325_-SINEAluName=AluSz
ADediting_946621chr20_5588339_-SINEAluName=AluSz
ADediting_946622chr20_5588342_-SINEAluName=AluSz
ADediting_946623chr20_5588348_-SINEAluName=AluSz
ADediting_946624chr20_5588405_-SINEAluName=AluSz
ADediting_946625chr20_5588418_-SINEAluName=AluSz
ADediting_946626chr20_5588419_-SINEAluName=AluSz
ADediting_946627chr20_5588562_-SINEAluName=AluSz
ADediting_946628chr20_5588633_-SINEAluName=AluSz
ADediting_946629chr20_5588642_-SINEAluName=AluSz
ADediting_946630chr20_5588659_-SINEAluName=AluSz
ADediting_946631chr20_5588709_-SINEAluName=AluSz
ADediting_946632chr20_5588717_-SINEAluName=AluSz
ADediting_946633chr20_5588749_-SINEAluName=AluSz
ADediting_946634chr20_5588773_-SINEAluName=AluSz
ADediting_946635chr20_5588778_-SINEAluName=AluSz
ADediting_946636chr20_5588787_-SINEAluName=AluSz
ADediting_946637chr20_5589355_-SINEAluName=AluSp
ADediting_946638chr20_5589367_-SINEAluName=AluSp
ADediting_946639chr20_5589368_-SINEAluName=AluSp
ADediting_946640chr20_5589407_-SINEAluName=AluSp
ADediting_946641chr20_5589408_-SINEAluName=AluSp
ADediting_946642chr20_5589439_-SINEAluName=AluSp
ADediting_946643chr20_5589446_-SINEAluName=AluSp
ADediting_946644chr20_5589449_-SINEAluName=AluSp
ADediting_946645chr20_5589480_-SINEAluName=AluSp
ADediting_946646chr20_5589484_-SINEAluName=AluSp
ADediting_946647chr20_5589490_-SINEAluName=AluSp
ADediting_946648chr20_5589500_-SINEAluName=AluSp
ADediting_946649chr20_5589503_-SINEAluName=AluSp
ADediting_946650chr20_5589512_-SINEAluName=AluSp
ADediting_946651chr20_5589525_-SINEAluName=AluSp
ADediting_946652chr20_5589529_-SINEAluName=AluSp
ADediting_946653chr20_5589530_-SINEAluName=AluSp
ADediting_946654chr20_5589536_-SINEAluName=AluSp
ADediting_946655chr20_5589550_-SINEAluName=AluSp
ADediting_946656chr20_5589600_-SINEAluName=AluSp
ADediting_946657chr20_5590278_-SINEAluName=AluSx
ADediting_946658chr20_5590284_-SINEAluName=AluSx
ADediting_946659chr20_5590298_-SINEAluName=AluSx
ADediting_946660chr20_5590336_-SINEAluName=AluSx
ADediting_946661chr20_5590337_-SINEAluName=AluSx
ADediting_946662chr20_5590338_-SINEAluName=AluSx
ADediting_946663chr20_5590349_-SINEAluName=AluSx
ADediting_946664chr20_5590353_-SINEAluName=AluSx
ADediting_946665chr20_5590369_-SINEAluName=AluSx
ADediting_946666chr20_5590375_-SINEAluName=AluSx
ADediting_946667chr20_5590378_-SINEAluName=AluSx
ADediting_946668chr20_5590388_-SINEAluName=AluSx
ADediting_946669chr20_5590422_-SINEAluName=AluSx
ADediting_946670chr20_5590432_-SINEAluName=AluSx
ADediting_946671chr20_5590435_-SINEAluName=AluSx
ADediting_946672chr20_5590443_-SINEAluName=AluSx
ADediting_946673chr20_5590460_-SINEAluName=AluSx
ADediting_946674chr20_5590505_-SINEAluName=AluSx
ADediting_946675chr20_5590541_-SINEAluName=AluSx
ADediting_946676chr20_5599293_-SINEAluName=Alu
ADediting_946677chr20_5599315_-SINEAluName=Alu
ADediting_946678chr20_5599354_-SINEAluName=AluSx1
ADediting_946679chr20_5599366_-SINEAluName=AluSx1
ADediting_946680chr20_5599379_-SINEAluName=AluSx1
ADediting_946681chr20_5599384_-SINEAluName=AluSx1
ADediting_946682chr20_5599385_-SINEAluName=AluSx1
ADediting_946683chr20_5599404_-SINEAluName=AluSx1
ADediting_946684chr20_5599410_-SINEAluName=AluSx1
ADediting_946685chr20_5599431_-SINEAluName=AluSx1
ADediting_946686chr20_5599441_-SINEAluName=AluSx1
ADediting_946687chr20_5599597_-SINEAluName=AluSx
ADediting_946688chr20_5599631_-SINEAluName=AluSx
ADediting_946689chr20_5599651_-SINEAluName=AluSx
ADediting_946690chr20_5599652_-SINEAluName=AluSx
ADediting_946691chr20_5599666_-SINEAluName=AluSx
ADediting_946692chr20_5599692_-SINEAluName=AluSx
ADediting_946693chr20_5599719_-SINEAluName=AluSx
ADediting_946694chr20_5599761_-SINEAluName=AluSx
ADediting_946695chr20_5599765_-SINEAluName=AluSx
ADediting_946696chr20_5599771_-SINEAluName=AluSx
ADediting_946697chr20_5599772_-SINEAluName=AluSx
ADediting_946698chr20_5599780_-SINEAluName=AluSx
ADediting_946699chr20_5599785_-SINEAluName=AluSx
ADediting_946700chr20_5599795_-SINEAluName=AluSx
ADediting_946701chr20_5599803_-SINEAluName=AluSx
ADediting_946702chr20_5599804_-SINEAluName=AluSx
ADediting_946703chr20_5599824_-SINEAluName=AluSx
ADediting_946704chr20_5599825_-SINEAluName=AluSx
ADediting_946705chr20_5600338_-SINEAluName=AluSz6
ADediting_946706chr20_5600432_-SINEAluName=AluSz
ADediting_946707chr20_5600454_-SINEAluName=AluSz
ADediting_946708chr20_5600463_-SINEAluName=AluSz
ADediting_946709chr20_5600471_-SINEAluName=AluSz
ADediting_946710chr20_5600472_-SINEAluName=AluSz
ADediting_946711chr20_5600589_-SINEAluName=AluSg
ADediting_946712chr20_5600590_-SINEAluName=AluSg
ADediting_946713chr20_5600688_-SINEAluName=AluSg
ADediting_946714chr20_5600710_-SINEAluName=AluSg
ADediting_946715chr20_5600719_-SINEAluName=AluSg
ADediting_946716chr20_5600732_-SINEAluName=AluSg
ADediting_946717chr20_5601136_-SINEAluName=AluSz6
ADediting_946718chr20_5601246_-SINEAluName=AluJo
ADediting_946719chr20_5601255_-SINEAluName=AluJo
ADediting_946720chr20_5601256_-SINEAluName=AluJo
ADediting_946721chr20_5601262_-SINEAluName=AluJo
ADediting_946722chr20_5601267_-SINEAluName=AluJo
ADediting_946723chr20_5601268_-SINEAluName=AluJo
ADediting_946724chr20_5601451_-SINEAluName=AluSx
ADediting_946725chr20_5601454_-SINEAluName=AluSx
ADediting_946726chr20_5601484_-SINEAluName=AluSx
ADediting_946727chr20_5601497_-SINEAluName=AluSx
ADediting_946728chr20_5601507_-SINEAluName=AluSx
ADediting_946729chr20_5601533_-SINEAluName=AluSx
ADediting_946730chr20_5601542_-SINEAluName=AluSx
ADediting_946731chr20_5601551_-SINEAluName=AluSx
ADediting_946732chr20_5601562_-SINEAluName=AluSx
ADediting_946733chr20_5601563_-SINEAluName=AluSx
ADediting_946734chr20_5601569_-SINEAluName=AluSx
ADediting_946735chr20_5601572_-SINEAluName=AluSx
ADediting_946736chr20_5601601_-SINEAluName=AluSx
ADediting_946737chr20_5601619_-SINEAluName=AluSx
ADediting_946738chr20_5601625_-SINEAluName=AluSx
ADediting_946739chr20_5601628_-SINEAluName=AluSx
ADediting_946740chr20_5601641_-SINEAluName=AluSx
ADediting_946741chr20_5601642_-SINEAluName=AluSx
ADediting_946742chr20_5601660_-SINEAluName=AluSx
ADediting_946743chr20_5602766_-SINEAluName=AluSx1
ADediting_946744chr20_5602767_-SINEAluName=AluSx1
ADediting_946745chr20_5602780_-SINEAluName=AluSx1
ADediting_946746chr20_5602786_-SINEAluName=AluSx1
ADediting_946747chr20_5602800_-SINEAluName=AluSx1
ADediting_946748chr20_5602920_-SINEAluName=AluSx1
ADediting_946749chr20_5602941_-SINEAluName=AluSx1
ADediting_946750chr20_5602944_-SINEAluName=AluSx1
ADediting_946751chr20_5603090_-SINEAluName=AluSg4
ADediting_946752chr20_5603193_-SINEAluName=AluSg4
ADediting_946753chr20_5603206_-SINEAluName=AluSg4
ADediting_946754chr20_5603210_-SINEAluName=AluSg4
ADediting_946755chr20_5603241_-SINEAluName=AluSg4
ADediting_946756chr20_5603246_-SINEAluName=AluSg4
ADediting_946757chr20_5603262_-SINEAluName=AluSg4
ADediting_946758chr20_5603812_-SINEAluName=AluSz
ADediting_946759chr20_5603839_-SINEAluName=AluSz
ADediting_946760chr20_5603875_-SINEAluName=AluSz
ADediting_946761chr20_5603884_-SINEAluName=AluSz
ADediting_946762chr20_5603885_-SINEAluName=AluSz
ADediting_946763chr20_5603911_-SINEAluName=AluSz
ADediting_946764chr20_5603926_-SINEAluName=AluSz
ADediting_946765chr20_5603935_-SINEAluName=AluSz
ADediting_946766chr20_5603960_-SINEAluName=AluSz
ADediting_946767chr20_5603965_-SINEAluName=AluSz
ADediting_946768chr20_5604019_-SINEAluName=AluSz
ADediting_946769chr20_5604020_-SINEAluName=AluSz
ADediting_946770chr20_5604036_-SINEAluName=AluSz
ADediting_1567535chr20_5562431_-SINEAluName=AluSx1
ADediting_1567536chr20_5562465_-SINEAluName=AluSx1
ADediting_1567537chr20_5564705_-SINEAluName=AluJb
ADediting_1567538chr20_5564725_-SINEAluName=AluJb
ADediting_1567539chr20_5564727_-SINEAluName=AluJb
ADediting_1567540chr20_5571847_-SINEAluName=AluSx1
ADediting_1567541chr20_5571852_-SINEAluName=AluSx1
ADediting_1567542chr20_5573695_-SINEAluName=AluJb
ADediting_1567543chr20_5587616_-SINEAluName=AluSg
ADediting_1567544chr20_5589455_-SINEAluName=AluSp
ADediting_1567545chr20_5589477_-SINEAluName=AluSp
ADediting_1567546chr20_5590281_-SINEAluName=AluSx
ADediting_1567547chr20_5590306_-SINEAluName=AluSx
ADediting_1567548chr20_5601036_-SINEAluName=AluSz6
ADediting_1567549chr20_5601058_-SINEAluName=AluSz6
ADediting_1641252chr20_5555738_-SINEAluName=AluSz6
ADediting_1641253chr20_5564680_-SINEAluName=AluJb
ADediting_1641254chr20_5564826_-SINEAluName=AluJb
ADediting_1641255chr20_5573010_-SINEAluName=AluJr
ADediting_1641256chr20_5573222_-SINEAluName=AluSx
ADediting_1641257chr20_5573661_-SINEAluName=AluJb
ADediting_1641258chr20_5573681_-SINEAluName=AluJb
ADediting_1641259chr20_5579090_-SINEAluName=AluJb
ADediting_1641260chr20_5587421_-SINEAluName=AluSg
ADediting_1641261chr20_5587545_-SINEAluName=AluSg
ADediting_1641262chr20_5587563_-SINEAluName=AluSg
ADediting_1641263chr20_5587647_-SINEAluName=AluSg
ADediting_1641264chr20_5588383_-SINEAluName=AluSz
ADediting_1641265chr20_5588429_-SINEAluName=AluSz
ADediting_1641266chr20_5588676_-SINEAluName=AluSz
ADediting_1641267chr20_5588716_-SINEAluName=AluSz
ADediting_1641268chr20_5589420_-SINEAluName=AluSp
ADediting_1641269chr20_5589463_-SINEAluName=AluSp
ADediting_1641270chr20_5590499_-SINEAluName=AluSx
ADediting_1641271chr20_5599680_-SINEAluName=AluSx
ADediting_1641272chr20_5599693_-SINEAluName=AluSx

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RNA A-to-I editing events in the alternative splicing sites for GPCPD1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GPCPD1

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for GPCPD1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GPCPD1


check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1471004chr9_63819627_+ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-4477bchr20554479055447978mer-1a55447905544813142-14.85
ADediting_1471004chr9_63819627_+ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-4477bchr20554479055447978mer-1a55447905544813142-14.85
ADediting_1535953chr14_101045971_+ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-381-3pchr20554685555468617mer-m855468545546875151-16.54
ADediting_1535953chr14_101045971_+ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-381-3pchr20554685555468617mer-m855468545546875151-16.54
ADediting_1631458chr19_40282624_-ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-641chr20554522555452317mer-m855452245545248159-17.07
ADediting_1631458chr19_40282624_-ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-641chr20554665155466577mer-m855466505546673140-11
ADediting_1631458chr19_40282624_-ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-641chr20554522555452317mer-m855452245545248159-17.07
ADediting_1631458chr19_40282624_-ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-641chr20554665155466577mer-m855466505546673140-11

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1097295chr3_85385762_+ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-5688chr20554596155459677mer-m855459605545981150-10.33
ADediting_1097295chr3_85385762_+ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-5688chr20554596155459677mer-m855459605545981150-10.33
ADediting_1535953chr14_101045971_+ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-381-3pchr20554717555471828mer-1a55471755547198147-13.78
ADediting_1535953chr14_101045971_+ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-381-3pchr20554717555471828mer-1a55471755547198147-13.78
ADediting_1535954chr14_101045974_+ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-381-3pchr20554717555471828mer-1a55471755547198147-13.78
ADediting_1535954chr14_101045974_+ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-381-3pchr20554717555471828mer-1a55471755547198147-13.78
ADediting_1643790chr3_121049689_+ENSG00000125772.13ENST00000379019.6GPCPD1-201hsa-miR-5682chr20554684455468507mer-m855468435546863150-21.85
ADediting_1643790chr3_121049689_+ENSG00000125772.13ENST00000418646.5GPCPD1-202hsa-miR-5682chr20554684455468507mer-m855468435546863150-21.85

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GPCPD1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for GPCPD1

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_946609chr20_5587638_-0.004158046772138890.1623477320193490.112222391783210.09038880909106921.92910886804366e-090.332573906765094
DLPFCADediting_946611chr20_5587645_-0.04922172151133550.1118003567313390.7461374709832170.0184600094418832.62401209036068e-090.329954901292869
DLPFCADediting_946638chr20_5589367_-0.02045684982067420.1316042594342870.8096001572965270.01373943763098313.80153793355122e-080.306077350424659
STGADediting_946650chr20_5589512_-0.8446401912521770.02170385935942620.25898836304216-0.12454652162210.001146722447729480.348814483563884
DLPFCADediting_946654chr20_5589536_-0.001803310826327780.1765708454763370.1630579503457740.07941839221484831.78084376302367e-090.333250675933088
DLPFCADediting_946728chr20_5601507_-0.260753170014206-0.06406688693077640.00193792430874259-0.1753865553325983.39931615716826e-110.364869929979806
DLPFCADediting_946729chr20_5601533_-0.8387001785536260.01160772873050520.0408978795061975-0.1161991953588024.34805961207978e-160.439711683231923
DLPFCADediting_946734chr20_5601569_-0.341036212307073-0.0542561125957240.0106108547585934-0.1449473482575649.99361142721553e-100.33809157512125
DLPFCADediting_946739chr20_5601628_-0.900701690110028-0.007115397838863260.0636218473584151-0.1054787888423212.13560388032827e-140.415905719679477

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC9.04315011955518e-410.6639431033224211.10335318574777e-560.7475897181330160.350564505958877-0.0531962975317919
AC5.66651634311252e-620.8197738145047542.29529320534507e-550.7932920715605168.17114023678928e-050.246524155048265
PCC2.16549419261759e-360.754365381356766.61963696842008e-430.7950587406095580.3584997209728190.0668048866970794
CER8.68747433140781e-250.7151501874595583.77193206497897e-110.5064971655478190.277442173832155-0.0892478299870306
TCX5.87848484455575e-090.452969442456095.13147598512916e-090.4545379978792130.110009185277793-0.131021452851276
FP1.21127267807885e-090.435718292758227.1285135351566e-120.4846589827058620.159753833645188-0.105826089912828
IFG0.0413216056480820.4108716390014560.5451499545907210.1270199047752550.9640627151556720.0094972414705487
PG3.23161846063489e-220.6329847019588933.43642622833939e-200.608072890763740.0296201603296013-0.159541016816539
STG3.10113217513048e-090.591622170005595.02527022473773e-100.6145680708498010.511700544255058-0.0725895570526363

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Relation with AD stages for GPCPD1

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
PCC8.7945779169413e-07-0.346935910735633

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RelatedDrugs for GPCPD1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GPCPD1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
GPCPD1C0027627Neoplasm Metastasis1CTD_human