|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for ACOT13 |
 Gene summary |
| Gene information | Gene symbol | ACOT13 | Gene ID | 55856 |
| Gene name | acyl-CoA thioesterase 13 | |
| Synonyms | HT012|PNAS-27|THEM2 | |
| Cytomap | 6p22.3 | |
| Type of gene | protein-coding | |
| Description | acyl-coenzyme A thioesterase 13hypothalamus protein HT012thioesterase superfamily member 2 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9NPJ3, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for ACOT13 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1252744(24671021, +), ADediting_1252745(24672383, +), ADediting_1252746(24672455, +), ADediting_1252747(24672518, +), ADediting_1252748(24672560, +), ADediting_1252749(24672578, +), ADediting_1252750(24673440, +), ADediting_1252751(24685931, +), ADediting_1252752(24688290, +), ADediting_1252753(24688297, +), ADediting_1252754(24688306, +), ADediting_1252755(24688310, +), ADediting_1252756(24688318, +), ADediting_1252757(24688348, +), ADediting_1252758(24688355, +), ADediting_1252759(24688374, +), ADediting_1252760(24688393, +), ADediting_1252761(24688394, +), ADediting_1252762(24688441, +), ADediting_1252763(24688442, +), ADediting_1252764(24688447, +), ADediting_1252765(24688449, +), ADediting_1252766(24688460, +), ADediting_1252767(24688465, +), ADediting_1252768(24695188, +), ADediting_1252769(24695202, +), ADediting_1252770(24695897, +), ADediting_1252771(24695902, +), ADediting_1252772(24695911, +), ADediting_1252773(24695990, +), ADediting_1252774(24696845, +), ADediting_1252775(24696956, +), ADediting_1252776(24697026, +), ADediting_1252777(24702131, +), ADediting_1252778(24702164, +), ADediting_1252779(24702236, +), ADediting_1252780(24702240, +), ADediting_1252781(24702295, +), ADediting_1252782(24702345, +), ADediting_1252783(24702956, +), ADediting_1252784(24703004, +), ADediting_1252785(24703013, +), ADediting_1252786(24703016, +), ADediting_1252787(24703026, +), ADediting_1252788(24703062, +), ADediting_1252789(24703065, +), ADediting_1252790(24703069, +), ADediting_1252791(24703097, +), ADediting_1252792(24703098, +), ADediting_1252793(24703105, +), ADediting_1252794(24703111, +), ADediting_1252795(24703112, +), ADediting_1252796(24703116, +), ADediting_1252797(24703138, +), ADediting_1252798(24703141, +), ADediting_1252799(24703150, +), ADediting_1583297(24695896, +), ADediting_1583298(24695938, +), ADediting_1583299(24702301, +), ADediting_1661112(24671022, +), ADediting_1661113(24687829, +), ADediting_1661114(24703076, +), |
Top |
RNA editing positional annotations for ACOT13 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1252744 | chr6_24671021_+ | intronic |
| ADediting_1252745 | chr6_24672383_+ | intronic |
| ADediting_1252746 | chr6_24672455_+ | intronic |
| ADediting_1252747 | chr6_24672518_+ | intronic |
| ADediting_1252748 | chr6_24672560_+ | intronic |
| ADediting_1252749 | chr6_24672578_+ | intronic |
| ADediting_1252750 | chr6_24673440_+ | intronic |
| ADediting_1252751 | chr6_24685931_+ | intronic |
| ADediting_1252752 | chr6_24688290_+ | intronic |
| ADediting_1252753 | chr6_24688297_+ | intronic |
| ADediting_1252754 | chr6_24688306_+ | intronic |
| ADediting_1252755 | chr6_24688310_+ | intronic |
| ADediting_1252756 | chr6_24688318_+ | intronic |
| ADediting_1252757 | chr6_24688348_+ | intronic |
| ADediting_1252758 | chr6_24688355_+ | intronic |
| ADediting_1252759 | chr6_24688374_+ | intronic |
| ADediting_1252760 | chr6_24688393_+ | intronic |
| ADediting_1252761 | chr6_24688394_+ | intronic |
| ADediting_1252762 | chr6_24688441_+ | intronic |
| ADediting_1252763 | chr6_24688442_+ | intronic |
| ADediting_1252764 | chr6_24688447_+ | intronic |
| ADediting_1252765 | chr6_24688449_+ | intronic |
| ADediting_1252766 | chr6_24688460_+ | intronic |
| ADediting_1252767 | chr6_24688465_+ | intronic |
| ADediting_1252768 | chr6_24695188_+ | intronic |
| ADediting_1252769 | chr6_24695202_+ | intronic |
| ADediting_1252770 | chr6_24695897_+ | intronic |
| ADediting_1252771 | chr6_24695902_+ | intronic |
| ADediting_1252772 | chr6_24695911_+ | intronic |
| ADediting_1252773 | chr6_24695990_+ | intronic |
| ADediting_1252774 | chr6_24696845_+ | intronic |
| ADediting_1252775 | chr6_24696956_+ | intronic |
| ADediting_1252776 | chr6_24697026_+ | intronic |
| ADediting_1252777 | chr6_24702131_+ | UTR3 |
| ADediting_1252778 | chr6_24702164_+ | UTR3 |
| ADediting_1252779 | chr6_24702236_+ | UTR3 |
| ADediting_1252780 | chr6_24702240_+ | UTR3 |
| ADediting_1252781 | chr6_24702295_+ | UTR3 |
| ADediting_1252782 | chr6_24702345_+ | UTR3 |
| ADediting_1252783 | chr6_24702956_+ | UTR3 |
| ADediting_1252784 | chr6_24703004_+ | UTR3 |
| ADediting_1252785 | chr6_24703013_+ | UTR3 |
| ADediting_1252786 | chr6_24703016_+ | UTR3 |
| ADediting_1252787 | chr6_24703026_+ | UTR3 |
| ADediting_1252788 | chr6_24703062_+ | UTR3 |
| ADediting_1252789 | chr6_24703065_+ | UTR3 |
| ADediting_1252790 | chr6_24703069_+ | UTR3 |
| ADediting_1252791 | chr6_24703097_+ | UTR3 |
| ADediting_1252792 | chr6_24703098_+ | UTR3 |
| ADediting_1252793 | chr6_24703105_+ | UTR3 |
| ADediting_1252794 | chr6_24703111_+ | UTR3 |
| ADediting_1252795 | chr6_24703112_+ | UTR3 |
| ADediting_1252796 | chr6_24703116_+ | UTR3 |
| ADediting_1252797 | chr6_24703138_+ | UTR3 |
| ADediting_1252798 | chr6_24703141_+ | UTR3 |
| ADediting_1252799 | chr6_24703150_+ | UTR3 |
| ADediting_1583297 | chr6_24695896_+ | intronic |
| ADediting_1583298 | chr6_24695938_+ | intronic |
| ADediting_1583299 | chr6_24702301_+ | UTR3 |
| ADediting_1661112 | chr6_24671022_+ | intronic |
| ADediting_1661113 | chr6_24687829_+ | intronic |
| ADediting_1661114 | chr6_24703076_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1252744 | chr6_24671021_+ | LINE | L1 | Name=L1PA6 |
| ADediting_1252745 | chr6_24672383_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1252746 | chr6_24672455_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1252747 | chr6_24672518_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1252748 | chr6_24672560_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1252749 | chr6_24672578_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1252750 | chr6_24673440_+ | SINE | Alu | Name=AluSz |
| ADediting_1252751 | chr6_24685931_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1252752 | chr6_24688290_+ | SINE | Alu | Name=AluJo |
| ADediting_1252753 | chr6_24688297_+ | SINE | Alu | Name=AluJo |
| ADediting_1252754 | chr6_24688306_+ | SINE | Alu | Name=AluJo |
| ADediting_1252755 | chr6_24688310_+ | SINE | Alu | Name=AluJo |
| ADediting_1252756 | chr6_24688318_+ | SINE | Alu | Name=AluJo |
| ADediting_1252757 | chr6_24688348_+ | SINE | Alu | Name=AluJo |
| ADediting_1252758 | chr6_24688355_+ | SINE | Alu | Name=AluJo |
| ADediting_1252759 | chr6_24688374_+ | SINE | Alu | Name=AluJo |
| ADediting_1252760 | chr6_24688393_+ | SINE | Alu | Name=AluJo |
| ADediting_1252761 | chr6_24688394_+ | SINE | Alu | Name=AluJo |
| ADediting_1252762 | chr6_24688441_+ | SINE | Alu | Name=AluJo |
| ADediting_1252763 | chr6_24688442_+ | SINE | Alu | Name=AluJo |
| ADediting_1252764 | chr6_24688447_+ | SINE | Alu | Name=AluJo |
| ADediting_1252765 | chr6_24688449_+ | SINE | Alu | Name=AluJo |
| ADediting_1252766 | chr6_24688460_+ | SINE | Alu | Name=AluJo |
| ADediting_1252767 | chr6_24688465_+ | SINE | Alu | Name=AluJo |
| ADediting_1252768 | chr6_24695188_+ | SINE | Alu | Name=AluSx |
| ADediting_1252769 | chr6_24695202_+ | SINE | Alu | Name=AluSx |
| ADediting_1252770 | chr6_24695897_+ | SINE | Alu | Name=AluSx |
| ADediting_1252771 | chr6_24695902_+ | SINE | Alu | Name=AluSx |
| ADediting_1252772 | chr6_24695911_+ | SINE | Alu | Name=AluSx |
| ADediting_1252773 | chr6_24695990_+ | SINE | Alu | Name=AluSx |
| ADediting_1252774 | chr6_24696845_+ | SINE | Alu | Name=AluSg |
| ADediting_1252775 | chr6_24696956_+ | SINE | Alu | Name=AluSg |
| ADediting_1252776 | chr6_24697026_+ | SINE | Alu | Name=AluSg |
| ADediting_1252777 | chr6_24702131_+ | SINE | Alu | Name=AluSx |
| ADediting_1252778 | chr6_24702164_+ | SINE | Alu | Name=AluSx |
| ADediting_1252779 | chr6_24702236_+ | SINE | Alu | Name=AluSx |
| ADediting_1252780 | chr6_24702240_+ | SINE | Alu | Name=AluSx |
| ADediting_1252781 | chr6_24702295_+ | SINE | Alu | Name=AluSx |
| ADediting_1252782 | chr6_24702345_+ | SINE | Alu | Name=AluSx |
| ADediting_1252783 | chr6_24702956_+ | SINE | Alu | Name=AluJo |
| ADediting_1252784 | chr6_24703004_+ | SINE | Alu | Name=AluJo |
| ADediting_1252785 | chr6_24703013_+ | SINE | Alu | Name=AluJo |
| ADediting_1252786 | chr6_24703016_+ | SINE | Alu | Name=AluJo |
| ADediting_1252787 | chr6_24703026_+ | SINE | Alu | Name=AluJo |
| ADediting_1252788 | chr6_24703062_+ | SINE | Alu | Name=AluJo |
| ADediting_1252789 | chr6_24703065_+ | SINE | Alu | Name=AluJo |
| ADediting_1252790 | chr6_24703069_+ | SINE | Alu | Name=AluJo |
| ADediting_1252791 | chr6_24703097_+ | SINE | Alu | Name=AluJo |
| ADediting_1252792 | chr6_24703098_+ | SINE | Alu | Name=AluJo |
| ADediting_1252793 | chr6_24703105_+ | SINE | Alu | Name=AluJo |
| ADediting_1252794 | chr6_24703111_+ | SINE | Alu | Name=AluJo |
| ADediting_1252795 | chr6_24703112_+ | SINE | Alu | Name=AluJo |
| ADediting_1252796 | chr6_24703116_+ | SINE | Alu | Name=AluJo |
| ADediting_1252797 | chr6_24703138_+ | SINE | Alu | Name=AluJo |
| ADediting_1252798 | chr6_24703141_+ | SINE | Alu | Name=AluJo |
| ADediting_1252799 | chr6_24703150_+ | SINE | Alu | Name=AluJo |
| ADediting_1583297 | chr6_24695896_+ | SINE | Alu | Name=AluSx |
| ADediting_1583298 | chr6_24695938_+ | SINE | Alu | Name=AluSx |
| ADediting_1583299 | chr6_24702301_+ | SINE | Alu | Name=AluSx |
| ADediting_1661112 | chr6_24671022_+ | LINE | L1 | Name=L1PA6 |
| ADediting_1661113 | chr6_24687829_+ | SINE | Alu | Name=AluSz |
| ADediting_1661114 | chr6_24703076_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for ACOT13 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ACOT13 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ACOT13 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for ACOT13 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1252777 | chr6_24702131_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-371b-5p | chr6 | 24702124 | 24702131 | 8mer-1a | 24702111 | 24702131 | 149 | -12.03 |
| ADediting_1252777 | chr6_24702131_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-373-5p | chr6 | 24702124 | 24702131 | 8mer-1a | 24702109 | 24702131 | 152 | -16.98 |
| ADediting_1252777 | chr6_24702131_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-616-5p | chr6 | 24702124 | 24702131 | 8mer-1a | 24702110 | 24702131 | 142 | -9.85 |
| ADediting_1252777 | chr6_24702131_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-371b-5p | chr6 | 24702124 | 24702131 | 8mer-1a | 24702111 | 24702131 | 149 | -12.03 |
| ADediting_1252777 | chr6_24702131_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-373-5p | chr6 | 24702124 | 24702131 | 8mer-1a | 24702109 | 24702131 | 152 | -16.98 |
| ADediting_1252777 | chr6_24702131_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-616-5p | chr6 | 24702124 | 24702131 | 8mer-1a | 24702110 | 24702131 | 142 | -9.85 |
| ADediting_1252778 | chr6_24702164_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4793-3p | chr6 | 24702160 | 24702166 | 7mer-m8 | 24702145 | 24702167 | 149 | -18.75 |
| ADediting_1252778 | chr6_24702164_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-7703 | chr6 | 24702159 | 24702165 | 7mer-m8 | 24702144 | 24702166 | 162 | -25.89 |
| ADediting_1252778 | chr6_24702164_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4793-3p | chr6 | 24702160 | 24702166 | 7mer-m8 | 24702145 | 24702167 | 149 | -18.75 |
| ADediting_1252778 | chr6_24702164_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-7703 | chr6 | 24702159 | 24702165 | 7mer-m8 | 24702144 | 24702166 | 162 | -25.89 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6771-5p | chr6 | 24702230 | 24702236 | 7mer-m8 | 24702218 | 24702237 | 160 | -34.33 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6771-5p | chr6 | 24702230 | 24702236 | 7mer-m8 | 24702218 | 24702237 | 160 | -34.33 |
| ADediting_1252780 | chr6_24702240_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3614-5p | chr6 | 24702233 | 24702239 | 7mer-m8 | 24702217 | 24702240 | 152 | -25.27 |
| ADediting_1252780 | chr6_24702240_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4691-3p | chr6 | 24702237 | 24702243 | 7mer-m8 | 24702217 | 24702244 | 150 | -26.36 |
| ADediting_1252780 | chr6_24702240_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3614-5p | chr6 | 24702233 | 24702239 | 7mer-m8 | 24702217 | 24702240 | 152 | -25.27 |
| ADediting_1252780 | chr6_24702240_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4691-3p | chr6 | 24702237 | 24702243 | 7mer-m8 | 24702217 | 24702244 | 150 | -26.36 |
| ADediting_1252781 | chr6_24702295_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3692-3p | chr6 | 24702291 | 24702298 | 8mer-1a | 24702276 | 24702298 | 168 | -21.29 |
| ADediting_1252781 | chr6_24702295_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3692-3p | chr6 | 24702291 | 24702298 | 8mer-1a | 24702276 | 24702298 | 168 | -21.29 |
| ADediting_1252785 | chr6_24703013_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6840-3p | chr6 | 24703007 | 24703013 | 7mer-m8 | 24702993 | 24703014 | 152 | -23.1 |
| ADediting_1252785 | chr6_24703013_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6840-3p | chr6 | 24703007 | 24703013 | 7mer-m8 | 24702993 | 24703014 | 152 | -23.1 |
| ADediting_1252786 | chr6_24703016_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4691-3p | chr6 | 24703013 | 24703019 | 7mer-m8 | 24702994 | 24703020 | 157 | -32.69 |
| ADediting_1252786 | chr6_24703016_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4691-3p | chr6 | 24703013 | 24703019 | 7mer-m8 | 24702994 | 24703020 | 157 | -32.69 |
| ADediting_1252787 | chr6_24703026_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-17-3p | chr6 | 24703022 | 24703028 | 7mer-m8 | 24703007 | 24703029 | 150 | -21.51 |
| ADediting_1252787 | chr6_24703026_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-17-3p | chr6 | 24703022 | 24703028 | 7mer-m8 | 24703007 | 24703029 | 150 | -21.51 |
| ADediting_1252788 | chr6_24703062_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3692-3p | chr6 | 24703058 | 24703065 | 8mer-1a | 24703042 | 24703065 | 142 | -11.57 |
| ADediting_1252788 | chr6_24703062_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3692-3p | chr6 | 24703058 | 24703065 | 8mer-1a | 24703042 | 24703065 | 142 | -11.57 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4684-5p | chr6 | 24703059 | 24703065 | 7mer-m8 | 24703045 | 24703066 | 150 | -8.1 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-519a-2-5p | chr6 | 24703058 | 24703065 | 8mer-1a | 24703045 | 24703065 | 151 | -12.66 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-520b-5p | chr6 | 24703058 | 24703065 | 8mer-1a | 24703045 | 24703065 | 151 | -12.66 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6818-3p | chr6 | 24703061 | 24703068 | 8mer-1a | 24703047 | 24703068 | 140 | -10.96 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4684-5p | chr6 | 24703059 | 24703065 | 7mer-m8 | 24703045 | 24703066 | 150 | -8.1 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-519a-2-5p | chr6 | 24703058 | 24703065 | 8mer-1a | 24703045 | 24703065 | 151 | -12.66 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-520b-5p | chr6 | 24703058 | 24703065 | 8mer-1a | 24703045 | 24703065 | 151 | -12.66 |
| ADediting_1252789 | chr6_24703065_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6818-3p | chr6 | 24703061 | 24703068 | 8mer-1a | 24703047 | 24703068 | 140 | -10.96 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-10a-5p | chr6 | 24703065 | 24703071 | 7mer-m8 | 24703050 | 24703072 | 149 | -12.63 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-10b-5p | chr6 | 24703065 | 24703071 | 7mer-m8 | 24703049 | 24703072 | 142 | -12.63 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4725-5p | chr6 | 24703066 | 24703072 | 7mer-m8 | 24703053 | 24703073 | 140 | -15.96 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-504-5p | chr6 | 24703066 | 24703072 | 7mer-m8 | 24703051 | 24703073 | 154 | -21.94 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-10a-5p | chr6 | 24703065 | 24703071 | 7mer-m8 | 24703050 | 24703072 | 149 | -12.63 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-10b-5p | chr6 | 24703065 | 24703071 | 7mer-m8 | 24703049 | 24703072 | 142 | -12.63 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4725-5p | chr6 | 24703066 | 24703072 | 7mer-m8 | 24703053 | 24703073 | 140 | -15.96 |
| ADediting_1252790 | chr6_24703069_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-504-5p | chr6 | 24703066 | 24703072 | 7mer-m8 | 24703051 | 24703073 | 154 | -21.94 |
| ADediting_1252792 | chr6_24703098_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4294 | chr6 | 24703096 | 24703102 | 7mer-m8 | 24703086 | 24703103 | 142 | -17.47 |
| ADediting_1252792 | chr6_24703098_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4329 | chr6 | 24703091 | 24703098 | 8mer-1a | 24703080 | 24703098 | 140 | -9.98 |
| ADediting_1252792 | chr6_24703098_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4294 | chr6 | 24703096 | 24703102 | 7mer-m8 | 24703086 | 24703103 | 142 | -17.47 |
| ADediting_1252792 | chr6_24703098_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4329 | chr6 | 24703091 | 24703098 | 8mer-1a | 24703080 | 24703098 | 140 | -9.98 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4433a-3p | chr6 | 24703098 | 24703104 | 7mer-m8 | 24703084 | 24703105 | 154 | -23.27 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-665 | chr6 | 24703099 | 24703105 | 7mer-m8 | 24703087 | 24703106 | 160 | -23.83 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6840-3p | chr6 | 24703100 | 24703106 | 7mer-m8 | 24703085 | 24703107 | 171 | -31.51 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4433a-3p | chr6 | 24703098 | 24703104 | 7mer-m8 | 24703084 | 24703105 | 154 | -23.27 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-665 | chr6 | 24703099 | 24703105 | 7mer-m8 | 24703087 | 24703106 | 160 | -23.83 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6840-3p | chr6 | 24703100 | 24703106 | 7mer-m8 | 24703085 | 24703107 | 171 | -31.51 |
| ADediting_1252795 | chr6_24703112_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-1199-5p | chr6 | 24703105 | 24703111 | 7mer-m8 | 24703093 | 24703112 | 148 | -22.6 |
| ADediting_1252795 | chr6_24703112_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6751-3p | chr6 | 24703105 | 24703111 | 7mer-m8 | 24703092 | 24703112 | 145 | -14.12 |
| ADediting_1252795 | chr6_24703112_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-1199-5p | chr6 | 24703105 | 24703111 | 7mer-m8 | 24703093 | 24703112 | 148 | -22.6 |
| ADediting_1252795 | chr6_24703112_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6751-3p | chr6 | 24703105 | 24703111 | 7mer-m8 | 24703092 | 24703112 | 145 | -14.12 |
| ADediting_1252796 | chr6_24703116_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-1288-3p | chr6 | 24703112 | 24703118 | 7mer-m8 | 24703099 | 24703119 | 151 | -23.26 |
| ADediting_1252796 | chr6_24703116_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3169 | chr6 | 24703113 | 24703119 | 7mer-m8 | 24703101 | 24703120 | 148 | -19.51 |
| ADediting_1252796 | chr6_24703116_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-1288-3p | chr6 | 24703112 | 24703118 | 7mer-m8 | 24703099 | 24703119 | 151 | -23.26 |
| ADediting_1252796 | chr6_24703116_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3169 | chr6 | 24703113 | 24703119 | 7mer-m8 | 24703101 | 24703120 | 148 | -19.51 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-637 | chr6 | 24703131 | 24703137 | 7mer-m8 | 24703115 | 24703138 | 143 | -21.79 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6852-5p | chr6 | 24703132 | 24703138 | 7mer-m8 | 24703120 | 24703139 | 157 | -23.32 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-7851-3p | chr6 | 24703133 | 24703140 | 8mer-1a | 24703119 | 24703140 | 164 | -27.81 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-637 | chr6 | 24703131 | 24703137 | 7mer-m8 | 24703115 | 24703138 | 143 | -21.79 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6852-5p | chr6 | 24703132 | 24703138 | 7mer-m8 | 24703120 | 24703139 | 157 | -23.32 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-7851-3p | chr6 | 24703133 | 24703140 | 8mer-1a | 24703119 | 24703140 | 164 | -27.81 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3614-5p | chr6 | 24703134 | 24703140 | 7mer-m8 | 24703118 | 24703141 | 147 | -17.85 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-383-3p | chr6 | 24703137 | 24703143 | 7mer-m8 | 24703125 | 24703144 | 148 | -19.24 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3614-5p | chr6 | 24703134 | 24703140 | 7mer-m8 | 24703118 | 24703141 | 147 | -17.85 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-383-3p | chr6 | 24703137 | 24703143 | 7mer-m8 | 24703125 | 24703144 | 148 | -19.24 |
| ADediting_1252799 | chr6_24703150_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-2276-3p | chr6 | 24703146 | 24703152 | 7mer-m8 | 24703133 | 24703153 | 152 | -21.84 |
| ADediting_1252799 | chr6_24703150_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-2276-3p | chr6 | 24703146 | 24703152 | 7mer-m8 | 24703133 | 24703153 | 152 | -21.84 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1252778 | chr6_24702164_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4718 | chr6 | 24702161 | 24702168 | 8mer-1a | 24702149 | 24702168 | 142 | -13.61 |
| ADediting_1252778 | chr6_24702164_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4718 | chr6 | 24702161 | 24702168 | 8mer-1a | 24702149 | 24702168 | 142 | -13.61 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-12126 | chr6 | 24702232 | 24702239 | 8mer-1a | 24702216 | 24702239 | 147 | -13.23 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-30b-3p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702215 | 24702236 | 151 | -15.38 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3689a-3p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702216 | 24702236 | 147 | -18.72 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3689b-3p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702216 | 24702236 | 147 | -17.55 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3689c | chr6 | 24702229 | 24702236 | 8mer-1a | 24702216 | 24702236 | 147 | -17.55 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6779-5p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702218 | 24702236 | 148 | -22.58 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6780a-5p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702213 | 24702236 | 152 | -25.37 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-887-5p | chr6 | 24702230 | 24702236 | 7mer-m8 | 24702218 | 24702237 | 143 | -19.73 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-12126 | chr6 | 24702232 | 24702239 | 8mer-1a | 24702216 | 24702239 | 147 | -13.23 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-30b-3p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702215 | 24702236 | 151 | -15.38 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3689a-3p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702216 | 24702236 | 147 | -18.72 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3689b-3p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702216 | 24702236 | 147 | -17.55 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3689c | chr6 | 24702229 | 24702236 | 8mer-1a | 24702216 | 24702236 | 147 | -17.55 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6779-5p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702218 | 24702236 | 148 | -22.58 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6780a-5p | chr6 | 24702229 | 24702236 | 8mer-1a | 24702213 | 24702236 | 152 | -25.37 |
| ADediting_1252779 | chr6_24702236_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-887-5p | chr6 | 24702230 | 24702236 | 7mer-m8 | 24702218 | 24702237 | 143 | -19.73 |
| ADediting_1252780 | chr6_24702240_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-5690 | chr6 | 24702237 | 24702243 | 7mer-m8 | 24702224 | 24702244 | 145 | -16.74 |
| ADediting_1252780 | chr6_24702240_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-5690 | chr6 | 24702237 | 24702243 | 7mer-m8 | 24702224 | 24702244 | 145 | -16.74 |
| ADediting_1252781 | chr6_24702295_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-1283 | chr6 | 24702289 | 24702296 | 8mer-1a | 24702275 | 24702296 | 148 | -13.71 |
| ADediting_1252781 | chr6_24702295_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-1283 | chr6 | 24702289 | 24702296 | 8mer-1a | 24702275 | 24702296 | 148 | -13.71 |
| ADediting_1252782 | chr6_24702345_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3622a-3p | chr6 | 24702342 | 24702349 | 8mer-1a | 24702328 | 24702349 | 146 | -17.11 |
| ADediting_1252782 | chr6_24702345_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-7162-3p | chr6 | 24702339 | 24702345 | 7mer-m8 | 24702328 | 24702346 | 140 | -15.88 |
| ADediting_1252782 | chr6_24702345_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3622a-3p | chr6 | 24702342 | 24702349 | 8mer-1a | 24702328 | 24702349 | 146 | -17.11 |
| ADediting_1252782 | chr6_24702345_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-7162-3p | chr6 | 24702339 | 24702345 | 7mer-m8 | 24702328 | 24702346 | 140 | -15.88 |
| ADediting_1252783 | chr6_24702956_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4679 | chr6 | 24702950 | 24702956 | 7mer-m8 | 24702936 | 24702957 | 148 | -12.65 |
| ADediting_1252783 | chr6_24702956_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-8070 | chr6 | 24702949 | 24702955 | 7mer-m8 | 24702934 | 24702956 | 146 | -17.86 |
| ADediting_1252783 | chr6_24702956_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4679 | chr6 | 24702950 | 24702956 | 7mer-m8 | 24702936 | 24702957 | 148 | -12.65 |
| ADediting_1252783 | chr6_24702956_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-8070 | chr6 | 24702949 | 24702955 | 7mer-m8 | 24702934 | 24702956 | 146 | -17.86 |
| ADediting_1252784 | chr6_24703004_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4499 | chr6 | 24703001 | 24703007 | 7mer-m8 | 24702991 | 24703008 | 154 | -21.13 |
| ADediting_1252784 | chr6_24703004_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6857-3p | chr6 | 24703000 | 24703006 | 7mer-m8 | 24702987 | 24703007 | 142 | -10.96 |
| ADediting_1252784 | chr6_24703004_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-873-3p | chr6 | 24703002 | 24703008 | 7mer-m8 | 24702988 | 24703009 | 149 | -19.11 |
| ADediting_1252784 | chr6_24703004_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4499 | chr6 | 24703001 | 24703007 | 7mer-m8 | 24702991 | 24703008 | 154 | -21.13 |
| ADediting_1252784 | chr6_24703004_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6857-3p | chr6 | 24703000 | 24703006 | 7mer-m8 | 24702987 | 24703007 | 142 | -10.96 |
| ADediting_1252784 | chr6_24703004_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-873-3p | chr6 | 24703002 | 24703008 | 7mer-m8 | 24702988 | 24703009 | 149 | -19.11 |
| ADediting_1252785 | chr6_24703013_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3664-3p | chr6 | 24703007 | 24703013 | 7mer-m8 | 24702993 | 24703014 | 145 | -17.1 |
| ADediting_1252785 | chr6_24703013_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3664-3p | chr6 | 24703007 | 24703013 | 7mer-m8 | 24702993 | 24703014 | 145 | -17.1 |
| ADediting_1252786 | chr6_24703016_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-5690 | chr6 | 24703013 | 24703019 | 7mer-m8 | 24703000 | 24703020 | 145 | -17.67 |
| ADediting_1252786 | chr6_24703016_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-5690 | chr6 | 24703013 | 24703019 | 7mer-m8 | 24703000 | 24703020 | 145 | -17.67 |
| ADediting_1252787 | chr6_24703026_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-20b-3p | chr6 | 24703022 | 24703028 | 7mer-m8 | 24703007 | 24703029 | 153 | -18.04 |
| ADediting_1252787 | chr6_24703026_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-20b-3p | chr6 | 24703022 | 24703028 | 7mer-m8 | 24703007 | 24703029 | 153 | -18.04 |
| ADediting_1252788 | chr6_24703062_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-1283 | chr6 | 24703056 | 24703063 | 8mer-1a | 24703042 | 24703063 | 150 | -11.57 |
| ADediting_1252788 | chr6_24703062_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-1283 | chr6 | 24703056 | 24703063 | 8mer-1a | 24703042 | 24703063 | 150 | -11.57 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-3135a | chr6 | 24703101 | 24703107 | 7mer-m8 | 24703084 | 24703108 | 150 | -22.52 |
| ADediting_1252793 | chr6_24703105_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-3135a | chr6 | 24703101 | 24703107 | 7mer-m8 | 24703084 | 24703108 | 150 | -22.52 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-12126 | chr6 | 24703133 | 24703140 | 8mer-1a | 24703116 | 24703140 | 149 | -19.83 |
| ADediting_1252797 | chr6_24703138_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-12126 | chr6 | 24703133 | 24703140 | 8mer-1a | 24703116 | 24703140 | 149 | -19.83 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4712-5p | chr6 | 24703138 | 24703145 | 8mer-1a | 24703124 | 24703145 | 140 | -15.64 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-770-5p | chr6 | 24703138 | 24703145 | 8mer-1a | 24703121 | 24703145 | 152 | -24.94 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4712-5p | chr6 | 24703138 | 24703145 | 8mer-1a | 24703124 | 24703145 | 140 | -15.64 |
| ADediting_1252798 | chr6_24703141_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-770-5p | chr6 | 24703138 | 24703145 | 8mer-1a | 24703121 | 24703145 | 152 | -24.94 |
| ADediting_1583299 | chr6_24702301_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-10a-5p | chr6 | 24702298 | 24702304 | 7mer-m8 | 24702283 | 24702305 | 149 | -13.26 |
| ADediting_1583299 | chr6_24702301_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-10b-5p | chr6 | 24702298 | 24702304 | 7mer-m8 | 24702283 | 24702305 | 141 | -13.26 |
| ADediting_1583299 | chr6_24702301_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-6732-3p | chr6 | 24702299 | 24702305 | 7mer-m8 | 24702285 | 24702306 | 150 | -13.9 |
| ADediting_1583299 | chr6_24702301_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-10a-5p | chr6 | 24702298 | 24702304 | 7mer-m8 | 24702283 | 24702305 | 149 | -13.26 |
| ADediting_1583299 | chr6_24702301_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-10b-5p | chr6 | 24702298 | 24702304 | 7mer-m8 | 24702283 | 24702305 | 141 | -13.26 |
| ADediting_1583299 | chr6_24702301_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-6732-3p | chr6 | 24702299 | 24702305 | 7mer-m8 | 24702285 | 24702306 | 150 | -13.9 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-337-3p | chr6 | 24702750 | 24702757 | 8mer-1a | 24702735 | 24702757 | 147 | -10.48 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-337-3p | chr6 | 24703368 | 24703374 | 7mer-m8 | 24703355 | 24703375 | 158 | -21.28 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-337-3p | chr6 | 24702750 | 24702757 | 8mer-1a | 24702735 | 24702757 | 147 | -10.48 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-337-3p | chr6 | 24703368 | 24703374 | 7mer-m8 | 24703355 | 24703375 | 158 | -21.28 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-381-3p | chr6 | 24702617 | 24702623 | 7mer-m8 | 24702604 | 24702624 | 150 | -13.66 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-381-3p | chr6 | 24702617 | 24702623 | 7mer-m8 | 24702604 | 24702624 | 150 | -13.66 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4775 | chr6 | 24703637 | 24703643 | 7mer-m8 | 24703623 | 24703644 | 147 | -7.11 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4775 | chr6 | 24703637 | 24703643 | 7mer-m8 | 24703623 | 24703644 | 147 | -7.11 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337758 | chr7_5495892_- | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-589-5p | chr6 | 24702115 | 24702121 | 7mer-m8 | 24702101 | 24702122 | 150 | -19.17 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-589-5p | chr6 | 24702412 | 24702418 | 7mer-m8 | 24702398 | 24702419 | 151 | -15.67 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-589-5p | chr6 | 24702115 | 24702121 | 7mer-m8 | 24702101 | 24702122 | 150 | -19.17 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-589-5p | chr6 | 24702412 | 24702418 | 7mer-m8 | 24702398 | 24702419 | 151 | -15.67 |
| ADediting_286380 | chr11_79422188_- | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-5579-3p | chr6 | 24701920 | 24701927 | 8mer-1a | 24701906 | 24701927 | 145 | -11.46 |
| ADediting_286380 | chr11_79422188_- | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-5579-3p | chr6 | 24701920 | 24701927 | 8mer-1a | 24701906 | 24701927 | 145 | -11.46 |
| ADediting_291761 | chr11_93733708_- | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-1304-3p | chr6 | 24703359 | 24703365 | 7mer-m8 | 24703345 | 24703366 | 148 | -14.33 |
| ADediting_291761 | chr11_93733708_- | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-1304-3p | chr6 | 24703359 | 24703365 | 7mer-m8 | 24703345 | 24703366 | 148 | -14.33 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000112304.11 | ENST00000230048.5 | ACOT13-201 | hsa-miR-4775 | chr6 | 24701939 | 24701945 | 7mer-1a | 24701925 | 24701945 | 141 | -10.69 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000112304.11 | ENST00000537591.5 | ACOT13-203 | hsa-miR-4775 | chr6 | 24701939 | 24701945 | 7mer-1a | 24701925 | 24701945 | 141 | -10.69 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for ACOT13 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000537591.5 | protein_coding |  |  |
| ENST00000230048.5 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1252777 | ENST00000537591.5 | chr6_24702131_+ | 1457 | -1210.60 | -1207.50 | -1248.10 |
| ADediting_1252778 | ENST00000537591.5 | chr6_24702164_+ | 1490 | -1210.60 | -1207.50 | -1248.10 |
| ADediting_1252779 | ENST00000537591.5 | chr6_24702236_+ | 1562 | -1206.80 | -1207.50 | -1248.10 |
| ADediting_1252780 | ENST00000537591.5 | chr6_24702240_+ | 1566 | -1209.00 | -1207.50 | -1248.10 |
| ADediting_1252781 | ENST00000537591.5 | chr6_24702295_+ | 1621 | -1207.20 | -1207.50 | -1248.10 |
| ADediting_1583299 | ENST00000537591.5 | chr6_24702301_+ | 1627 | -1208.00 | -1207.50 | -1248.10 |
| ADediting_1252782 | ENST00000537591.5 | chr6_24702345_+ | 1671 | -1208.10 | -1207.50 | -1248.10 |
| ADediting_1252783 | ENST00000537591.5 | chr6_24702956_+ | 2282 | -1210.90 | -1207.50 | -1248.10 |
| ADediting_1252784 | ENST00000537591.5 | chr6_24703004_+ | 2330 | -1208.50 | -1207.50 | -1248.10 |
| ADediting_1252785 | ENST00000537591.5 | chr6_24703013_+ | 2339 | -1211.20 | -1207.50 | -1248.10 |
| ADediting_1252786 | ENST00000537591.5 | chr6_24703016_+ | 2342 | -1210.60 | -1207.50 | -1248.10 |
| ADediting_1252787 | ENST00000537591.5 | chr6_24703026_+ | 2352 | -1207.90 | -1207.50 | -1248.10 |
| ADediting_1252788 | ENST00000537591.5 | chr6_24703062_+ | 2388 | -1208.50 | -1207.50 | -1248.10 |
| ADediting_1252789 | ENST00000537591.5 | chr6_24703065_+ | 2391 | -1210.90 | -1207.50 | -1248.10 |
| ADediting_1252790 | ENST00000537591.5 | chr6_24703069_+ | 2395 | -1210.40 | -1207.50 | -1248.10 |
| ADediting_1661114 | ENST00000537591.5 | chr6_24703076_+ | 2402 | -1207.30 | -1207.50 | -1248.10 |
| ADediting_1252791 | ENST00000537591.5 | chr6_24703097_+ | 2423 | -1208.50 | -1207.50 | -1248.10 |
| ADediting_1252792 | ENST00000537591.5 | chr6_24703098_+ | 2424 | -1211.10 | -1207.50 | -1248.10 |
| ADediting_1252793 | ENST00000537591.5 | chr6_24703105_+ | 2431 | -1211.10 | -1207.50 | -1248.10 |
| ADediting_1252794 | ENST00000537591.5 | chr6_24703111_+ | 2437 | -1208.90 | -1207.50 | -1248.10 |
| ADediting_1252795 | ENST00000537591.5 | chr6_24703112_+ | 2438 | -1212.30 | -1207.50 | -1248.10 |
| ADediting_1252796 | ENST00000537591.5 | chr6_24703116_+ | 2442 | -1210.40 | -1207.50 | -1248.10 |
| ADediting_1252797 | ENST00000537591.5 | chr6_24703138_+ | 2464 | -1211.70 | -1207.50 | -1248.10 |
| ADediting_1252798 | ENST00000537591.5 | chr6_24703141_+ | 2467 | -1211.50 | -1207.50 | -1248.10 |
| ADediting_1252799 | ENST00000537591.5 | chr6_24703150_+ | 2476 | -1211.10 | -1207.50 | -1248.10 |
| ADediting_1252777 | ENST00000230048.5 | chr6_24702131_+ | 1126 | -1111.90 | -1110.10 | -1145.10 |
| ADediting_1252778 | ENST00000230048.5 | chr6_24702164_+ | 1159 | -1111.60 | -1110.10 | -1145.10 |
| ADediting_1252779 | ENST00000230048.5 | chr6_24702236_+ | 1231 | -1110.70 | -1110.10 | -1145.10 |
| ADediting_1252780 | ENST00000230048.5 | chr6_24702240_+ | 1235 | -1111.80 | -1110.10 | -1145.10 |
| ADediting_1252781 | ENST00000230048.5 | chr6_24702295_+ | 1290 | -1111.60 | -1110.10 | -1145.10 |
| ADediting_1583299 | ENST00000230048.5 | chr6_24702301_+ | 1296 | -1110.00 | -1110.10 | -1145.10 |
| ADediting_1252782 | ENST00000230048.5 | chr6_24702345_+ | 1340 | -1110.70 | -1110.10 | -1145.10 |
| ADediting_1252783 | ENST00000230048.5 | chr6_24702956_+ | 1951 | -1113.50 | -1110.10 | -1145.10 |
| ADediting_1252784 | ENST00000230048.5 | chr6_24703004_+ | 1999 | -1109.70 | -1110.10 | -1145.10 |
| ADediting_1252785 | ENST00000230048.5 | chr6_24703013_+ | 2008 | -1113.80 | -1110.10 | -1145.10 |
| ADediting_1252786 | ENST00000230048.5 | chr6_24703016_+ | 2011 | -1113.20 | -1110.10 | -1145.10 |
| ADediting_1252787 | ENST00000230048.5 | chr6_24703026_+ | 2021 | -1110.10 | -1110.10 | -1145.10 |
| ADediting_1252788 | ENST00000230048.5 | chr6_24703062_+ | 2057 | -1111.10 | -1110.10 | -1145.10 |
| ADediting_1252789 | ENST00000230048.5 | chr6_24703065_+ | 2060 | -1110.10 | -1110.10 | -1145.10 |
| ADediting_1252790 | ENST00000230048.5 | chr6_24703069_+ | 2064 | -1110.40 | -1110.10 | -1145.10 |
| ADediting_1661114 | ENST00000230048.5 | chr6_24703076_+ | 2071 | -1108.90 | -1110.10 | -1145.10 |
| ADediting_1252791 | ENST00000230048.5 | chr6_24703097_+ | 2092 | -1111.10 | -1110.10 | -1145.10 |
| ADediting_1252792 | ENST00000230048.5 | chr6_24703098_+ | 2093 | -1113.70 | -1110.10 | -1145.10 |
| ADediting_1252793 | ENST00000230048.5 | chr6_24703105_+ | 2100 | -1113.70 | -1110.10 | -1145.10 |
| ADediting_1252794 | ENST00000230048.5 | chr6_24703111_+ | 2106 | -1111.00 | -1110.10 | -1145.10 |
| ADediting_1252795 | ENST00000230048.5 | chr6_24703112_+ | 2107 | -1114.90 | -1110.10 | -1145.10 |
| ADediting_1252796 | ENST00000230048.5 | chr6_24703116_+ | 2111 | -1113.00 | -1110.10 | -1145.10 |
| ADediting_1252797 | ENST00000230048.5 | chr6_24703138_+ | 2133 | -1111.90 | -1110.10 | -1145.10 |
| ADediting_1252798 | ENST00000230048.5 | chr6_24703141_+ | 2136 | -1111.20 | -1110.10 | -1145.10 |
| ADediting_1252799 | ENST00000230048.5 | chr6_24703150_+ | 2145 | -1110.60 | -1110.10 | -1145.10 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for ACOT13 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1252786 | chr6_24703016_+ | 0.00702302300795898 | 0.152825328447755 | 0.506578967069785 | 0.0378619719633266 | 4.6389596989274e-14 | 0.410930395018522 |
| DLPFC | ADediting_1252791 | chr6_24703097_+ | 0.0149426385730855 | 0.138123453449666 | 0.694686413362522 | 0.0223803048264334 | 1.18184803213528e-15 | 0.433775332276245 |
| DLPFC | ADediting_1252793 | chr6_24703105_+ | 0.0135491588234074 | 0.14010339580404 | 0.184175444223811 | 0.0756232419364555 | 2.83526231611273e-12 | 0.383069525046053 |
| DLPFC | ADediting_1252798 | chr6_24703141_+ | 0.157280277850645 | 0.0805203982078004 | 0.535476612588318 | 0.0353264811778132 | 2.69229972659464e-10 | 0.348780947829972 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 5.22025240203259e-19 | 0.476884090416972 | 3.42176504547418e-36 | 0.633549145699594 | 0.0781928654809902 | 0.100186269251915 |
| AC | 2.6075048675507e-40 | 0.714250240076517 | 1.25405052420219e-26 | 0.60767554964315 | 7.19833913575183e-21 | 0.546505196805041 |
| PCC | 1.35533208502112e-11 | 0.464128368548155 | 4.42016296008871e-12 | 0.473815045142513 | 0.00283410728337185 | 0.214881697771584 |
| CER | 1.67460659033407e-06 | 0.379481912667722 | 0.0019037228226488 | 0.251525985960059 | 0.00011377398156426 | 0.309898891132545 |
| TCX | 4.98854517398418e-08 | 0.427183805676875 | 7.56684854039115e-06 | 0.3564537279375 | 0.689908070083801 | -0.0328425180941153 |
| FP | 3.93619661133826e-18 | 0.590801678380252 | 8.89813543599281e-22 | 0.638565591849701 | 0.257020067421999 | 0.085402981365056 |
| IFG | 0.00504682306744525 | 0.542865963695473 | 0.0154861306570504 | 0.478701818785066 | 0.4757690939817 | -0.14947289530622 |
| PG | 3.6260442474191e-57 | 0.865598011911158 | 4.34268847340078e-21 | 0.61939068393728 | 0.89526656003972 | 0.00971782649366314 |
| STG | 1.68580285931638e-16 | 0.751906939430969 | 5.17540731366888e-15 | 0.726555951601412 | 0.921058528938135 | -0.0109768963087335 |
Top |
Relation with AD stages for ACOT13 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| IFG | 0.0479208892686976 | -0.39942008981819 |
Top |
RelatedDrugs for ACOT13 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ACOT13 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|