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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TCP11L1 |
 Gene summary |
| Gene information | Gene symbol | TCP11L1 | Gene ID | 55346 |
| Gene name | t-complex 11 like 1 | |
| Synonyms | dJ85M6.3 | |
| Cytomap | 11p13 | |
| Type of gene | protein-coding | |
| Description | T-complex protein 11-like protein 1t-complex 11, testis-specific-like 1 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9NUJ3, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for TCP11L1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_248357(33041604, +), ADediting_248358(33041636, +), ADediting_248359(33041659, +), ADediting_248360(33041660, +), ADediting_248361(33041672, +), ADediting_248362(33041706, +), ADediting_248363(33042150, +), ADediting_248364(33042162, +), ADediting_248365(33042205, +), ADediting_248366(33042260, +), ADediting_248367(33042270, +), ADediting_248368(33042272, +), ADediting_248369(33042295, +), ADediting_248370(33042312, +), ADediting_248371(33042337, +), ADediting_248372(33042746, +), ADediting_248373(33042747, +), ADediting_248374(33042866, +), ADediting_248375(33042879, +), ADediting_248376(33042880, +), ADediting_248377(33042919, +), ADediting_248378(33042943, +), ADediting_248379(33042945, +), ADediting_248380(33042946, +), ADediting_248381(33043001, +), ADediting_248382(33043010, +), ADediting_248383(33043011, +), ADediting_248384(33043012, +), ADediting_248385(33045099, +), ADediting_248386(33045102, +), ADediting_248387(33045135, +), ADediting_248388(33045153, +), ADediting_248389(33045164, +), ADediting_248390(33045174, +), ADediting_248391(33045230, +), ADediting_248392(33045254, +), ADediting_248393(33045336, +), ADediting_248394(33047013, +), ADediting_248395(33047063, +), ADediting_248396(33047067, +), ADediting_248397(33047070, +), ADediting_248398(33047076, +), ADediting_248399(33047142, +), ADediting_248400(33048994, +), ADediting_248401(33049019, +), ADediting_248402(33049040, +), ADediting_248403(33049156, +), ADediting_248404(33051237, +), ADediting_248405(33051248, +), ADediting_248406(33051285, +), ADediting_248407(33051349, +), ADediting_248408(33051374, +), ADediting_248409(33053201, +), ADediting_248410(33053225, +), ADediting_248411(33053262, +), ADediting_248412(33053916, +), ADediting_248413(33053934, +), ADediting_248414(33054053, +), ADediting_248415(33061826, +), ADediting_248416(33061852, +), ADediting_248417(33061879, +), ADediting_248418(33069618, +), ADediting_248419(33069626, +), ADediting_248420(33069699, +), ADediting_248421(33069706, +), ADediting_248422(33069709, +), ADediting_248423(33069718, +), ADediting_248424(33069723, +), ADediting_248425(33069731, +), ADediting_248426(33069732, +), ADediting_248427(33069735, +), ADediting_248428(33069791, +), ADediting_248429(33069816, +), ADediting_248430(33069827, +), ADediting_248431(33069842, +), ADediting_248432(33069859, +), ADediting_248433(33070061, +), ADediting_248434(33070135, +), ADediting_248435(33070144, +), ADediting_248436(33070160, +), ADediting_248437(33070183, +), ADediting_248438(33070187, +), ADediting_248439(33070196, +), ADediting_248440(33070226, +), ADediting_248441(33070268, +), ADediting_248442(33070437, +), ADediting_248443(33070461, +), ADediting_248444(33070538, +), ADediting_248445(33070587, +), ADediting_248446(33070881, +), ADediting_248447(33070882, +), ADediting_248448(33071086, +), ADediting_248449(33071113, +), ADediting_248450(33071159, +), ADediting_248451(33071915, +), ADediting_248452(33071920, +), ADediting_248453(33071946, +), ADediting_248454(33071975, +), ADediting_248455(33072003, +), ADediting_248456(33072020, +), ADediting_248457(33072026, +), ADediting_248458(33072029, +), ADediting_248459(33072096, +), ADediting_248460(33072118, +), ADediting_248461(33073863, +), ADediting_248462(33073924, +), ADediting_248463(33073953, +), ADediting_248464(33073959, +), ADediting_248465(33073961, +), ADediting_248466(33073962, +), ADediting_248467(33073988, +), ADediting_248468(33073992, +), ADediting_248469(33074007, +), ADediting_248470(33074031, +), ADediting_248471(33074039, +), ADediting_248472(33074040, +), ADediting_248473(33074041, +), ADediting_248474(33074046, +), ADediting_248475(33074057, +), ADediting_248476(33074061, +), ADediting_248477(33074070, +), ADediting_248478(33074086, +), ADediting_248479(33074096, +), ADediting_248480(33074097, +), ADediting_248481(33074106, +), ADediting_248482(33074129, +), ADediting_248483(33074138, +), ADediting_248484(33074149, +), ADediting_248485(33074158, +), ADediting_248486(33074167, +), ADediting_248487(33074169, +), ADediting_248488(33074171, +), ADediting_248489(33074174, +), ADediting_248490(33074180, +), ADediting_248491(33074657, +), ADediting_248492(33074672, +), ADediting_248493(33074674, +), ADediting_248494(33074675, +), ADediting_248495(33074696, +), ADediting_248496(33074697, +), ADediting_248497(33074701, +), ADediting_248498(33074728, +), ADediting_248499(33074729, +), ADediting_248500(33074739, +), ADediting_248501(33074744, +), ADediting_248502(33074746, +), ADediting_248503(33074748, +), ADediting_248504(33074752, +), ADediting_248505(33074765, +), ADediting_248506(33074769, +), ADediting_248507(33074770, +), ADediting_248508(33074783, +), ADediting_248509(33074786, +), ADediting_248510(33074802, +), ADediting_248511(33074806, +), ADediting_248512(33074818, +), ADediting_248513(33074836, +), ADediting_248514(33074841, +), ADediting_248515(33074842, +), ADediting_248516(33074843, +), ADediting_248517(33074849, +), ADediting_248518(33074859, +), ADediting_248519(33074862, +), ADediting_248520(33074875, +), ADediting_248521(33074880, +), ADediting_248522(33074883, +), ADediting_248523(33074886, +), ADediting_248524(33074889, +), ADediting_248525(33075230, +), ADediting_248526(33075250, +), ADediting_248527(33075275, +), ADediting_248528(33075280, +), ADediting_248529(33075285, +), ADediting_248530(33075290, +), ADediting_248531(33075291, +), ADediting_248532(33075297, +), ADediting_248533(33075310, +), ADediting_248534(33075311, +), ADediting_248535(33075328, +), ADediting_248536(33075340, +), ADediting_248537(33075350, +), ADediting_248538(33075352, +), ADediting_248539(33075356, +), ADediting_248540(33075363, +), ADediting_248541(33075376, +), ADediting_248542(33075377, +), ADediting_248543(33075391, +), ADediting_248544(33075394, +), ADediting_248545(33075408, +), ADediting_248546(33075411, +), ADediting_248547(33075420, +), ADediting_248548(33075452, +), ADediting_248549(33075470, +), ADediting_248550(33075484, +), ADediting_248551(33075486, +), ADediting_248552(33075502, +), ADediting_248553(33076788, +), ADediting_248554(33076804, +), ADediting_248555(33076817, +), ADediting_248556(33076841, +), ADediting_248557(33076853, +), ADediting_248558(33076863, +), ADediting_248559(33076906, +), ADediting_248560(33076909, +), ADediting_248561(33076931, +), ADediting_248562(33076935, +), ADediting_248563(33076967, +), ADediting_248564(33076986, +), ADediting_1526684(33041671, +), ADediting_1526685(33042211, +), ADediting_1526686(33042341, +), ADediting_1526687(33042962, +), ADediting_1526688(33043088, +), ADediting_1526689(33074033, +), ADediting_1526690(33074119, +), ADediting_1526691(33074782, +), ADediting_1609472(33042195, +), ADediting_1609473(33052872, +), ADediting_1609474(33073984, +), ADediting_1609475(33074772, +), ADediting_1609476(33074868, +), |
Top |
RNA editing positional annotations for TCP11L1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_248357 | chr11_33041604_+ | intronic |
| ADediting_248358 | chr11_33041636_+ | intronic |
| ADediting_248359 | chr11_33041659_+ | intronic |
| ADediting_248360 | chr11_33041660_+ | intronic |
| ADediting_248361 | chr11_33041672_+ | intronic |
| ADediting_248362 | chr11_33041706_+ | intronic |
| ADediting_248363 | chr11_33042150_+ | intronic |
| ADediting_248364 | chr11_33042162_+ | intronic |
| ADediting_248365 | chr11_33042205_+ | intronic |
| ADediting_248366 | chr11_33042260_+ | intronic |
| ADediting_248367 | chr11_33042270_+ | intronic |
| ADediting_248368 | chr11_33042272_+ | intronic |
| ADediting_248369 | chr11_33042295_+ | intronic |
| ADediting_248370 | chr11_33042312_+ | intronic |
| ADediting_248371 | chr11_33042337_+ | intronic |
| ADediting_248372 | chr11_33042746_+ | intronic |
| ADediting_248373 | chr11_33042747_+ | intronic |
| ADediting_248374 | chr11_33042866_+ | intronic |
| ADediting_248375 | chr11_33042879_+ | intronic |
| ADediting_248376 | chr11_33042880_+ | intronic |
| ADediting_248377 | chr11_33042919_+ | intronic |
| ADediting_248378 | chr11_33042943_+ | intronic |
| ADediting_248379 | chr11_33042945_+ | intronic |
| ADediting_248380 | chr11_33042946_+ | intronic |
| ADediting_248381 | chr11_33043001_+ | intronic |
| ADediting_248382 | chr11_33043010_+ | intronic |
| ADediting_248383 | chr11_33043011_+ | intronic |
| ADediting_248384 | chr11_33043012_+ | intronic |
| ADediting_248385 | chr11_33045099_+ | intronic |
| ADediting_248386 | chr11_33045102_+ | intronic |
| ADediting_248387 | chr11_33045135_+ | intronic |
| ADediting_248388 | chr11_33045153_+ | intronic |
| ADediting_248389 | chr11_33045164_+ | intronic |
| ADediting_248390 | chr11_33045174_+ | intronic |
| ADediting_248391 | chr11_33045230_+ | intronic |
| ADediting_248392 | chr11_33045254_+ | intronic |
| ADediting_248393 | chr11_33045336_+ | intronic |
| ADediting_248394 | chr11_33047013_+ | intronic |
| ADediting_248395 | chr11_33047063_+ | intronic |
| ADediting_248396 | chr11_33047067_+ | intronic |
| ADediting_248397 | chr11_33047070_+ | intronic |
| ADediting_248398 | chr11_33047076_+ | intronic |
| ADediting_248399 | chr11_33047142_+ | intronic |
| ADediting_248400 | chr11_33048994_+ | intronic |
| ADediting_248401 | chr11_33049019_+ | intronic |
| ADediting_248402 | chr11_33049040_+ | intronic |
| ADediting_248403 | chr11_33049156_+ | intronic |
| ADediting_248404 | chr11_33051237_+ | intronic |
| ADediting_248405 | chr11_33051248_+ | intronic |
| ADediting_248406 | chr11_33051285_+ | intronic |
| ADediting_248407 | chr11_33051349_+ | intronic |
| ADediting_248408 | chr11_33051374_+ | intronic |
| ADediting_248409 | chr11_33053201_+ | intronic |
| ADediting_248410 | chr11_33053225_+ | intronic |
| ADediting_248411 | chr11_33053262_+ | intronic |
| ADediting_248412 | chr11_33053916_+ | intronic |
| ADediting_248413 | chr11_33053934_+ | intronic |
| ADediting_248414 | chr11_33054053_+ | intronic |
| ADediting_248415 | chr11_33061826_+ | intronic |
| ADediting_248416 | chr11_33061852_+ | intronic |
| ADediting_248417 | chr11_33061879_+ | intronic |
| ADediting_248418 | chr11_33069618_+ | intronic |
| ADediting_248419 | chr11_33069626_+ | intronic |
| ADediting_248420 | chr11_33069699_+ | intronic |
| ADediting_248421 | chr11_33069706_+ | intronic |
| ADediting_248422 | chr11_33069709_+ | intronic |
| ADediting_248423 | chr11_33069718_+ | intronic |
| ADediting_248424 | chr11_33069723_+ | intronic |
| ADediting_248425 | chr11_33069731_+ | intronic |
| ADediting_248426 | chr11_33069732_+ | intronic |
| ADediting_248427 | chr11_33069735_+ | intronic |
| ADediting_248428 | chr11_33069791_+ | intronic |
| ADediting_248429 | chr11_33069816_+ | intronic |
| ADediting_248430 | chr11_33069827_+ | intronic |
| ADediting_248431 | chr11_33069842_+ | intronic |
| ADediting_248432 | chr11_33069859_+ | intronic |
| ADediting_248433 | chr11_33070061_+ | intronic |
| ADediting_248434 | chr11_33070135_+ | intronic |
| ADediting_248435 | chr11_33070144_+ | intronic |
| ADediting_248436 | chr11_33070160_+ | intronic |
| ADediting_248437 | chr11_33070183_+ | intronic |
| ADediting_248438 | chr11_33070187_+ | intronic |
| ADediting_248439 | chr11_33070196_+ | intronic |
| ADediting_248440 | chr11_33070226_+ | intronic |
| ADediting_248441 | chr11_33070268_+ | intronic |
| ADediting_248442 | chr11_33070437_+ | intronic |
| ADediting_248443 | chr11_33070461_+ | intronic |
| ADediting_248444 | chr11_33070538_+ | intronic |
| ADediting_248445 | chr11_33070587_+ | intronic |
| ADediting_248446 | chr11_33070881_+ | intronic |
| ADediting_248447 | chr11_33070882_+ | intronic |
| ADediting_248448 | chr11_33071086_+ | intronic |
| ADediting_248449 | chr11_33071113_+ | intronic |
| ADediting_248450 | chr11_33071159_+ | intronic |
| ADediting_248451 | chr11_33071915_+ | intronic |
| ADediting_248452 | chr11_33071920_+ | intronic |
| ADediting_248453 | chr11_33071946_+ | intronic |
| ADediting_248454 | chr11_33071975_+ | intronic |
| ADediting_248455 | chr11_33072003_+ | intronic |
| ADediting_248456 | chr11_33072020_+ | intronic |
| ADediting_248457 | chr11_33072026_+ | intronic |
| ADediting_248458 | chr11_33072029_+ | intronic |
| ADediting_248459 | chr11_33072096_+ | intronic |
| ADediting_248460 | chr11_33072118_+ | intronic |
| ADediting_248461 | chr11_33073863_+ | intronic |
| ADediting_248462 | chr11_33073924_+ | intronic |
| ADediting_248463 | chr11_33073953_+ | intronic |
| ADediting_248464 | chr11_33073959_+ | intronic |
| ADediting_248465 | chr11_33073961_+ | intronic |
| ADediting_248466 | chr11_33073962_+ | intronic |
| ADediting_248467 | chr11_33073988_+ | intronic |
| ADediting_248468 | chr11_33073992_+ | intronic |
| ADediting_248469 | chr11_33074007_+ | intronic |
| ADediting_248470 | chr11_33074031_+ | intronic |
| ADediting_248471 | chr11_33074039_+ | intronic |
| ADediting_248472 | chr11_33074040_+ | intronic |
| ADediting_248473 | chr11_33074041_+ | intronic |
| ADediting_248474 | chr11_33074046_+ | intronic |
| ADediting_248475 | chr11_33074057_+ | intronic |
| ADediting_248476 | chr11_33074061_+ | intronic |
| ADediting_248477 | chr11_33074070_+ | intronic |
| ADediting_248478 | chr11_33074086_+ | intronic |
| ADediting_248479 | chr11_33074096_+ | intronic |
| ADediting_248480 | chr11_33074097_+ | intronic |
| ADediting_248481 | chr11_33074106_+ | intronic |
| ADediting_248482 | chr11_33074129_+ | intronic |
| ADediting_248483 | chr11_33074138_+ | intronic |
| ADediting_248484 | chr11_33074149_+ | intronic |
| ADediting_248485 | chr11_33074158_+ | intronic |
| ADediting_248486 | chr11_33074167_+ | intronic |
| ADediting_248487 | chr11_33074169_+ | intronic |
| ADediting_248488 | chr11_33074171_+ | intronic |
| ADediting_248489 | chr11_33074174_+ | intronic |
| ADediting_248490 | chr11_33074180_+ | intronic |
| ADediting_248491 | chr11_33074657_+ | intronic |
| ADediting_248492 | chr11_33074672_+ | intronic |
| ADediting_248493 | chr11_33074674_+ | intronic |
| ADediting_248494 | chr11_33074675_+ | intronic |
| ADediting_248495 | chr11_33074696_+ | intronic |
| ADediting_248496 | chr11_33074697_+ | intronic |
| ADediting_248497 | chr11_33074701_+ | intronic |
| ADediting_248498 | chr11_33074728_+ | intronic |
| ADediting_248499 | chr11_33074729_+ | intronic |
| ADediting_248500 | chr11_33074739_+ | intronic |
| ADediting_248501 | chr11_33074744_+ | intronic |
| ADediting_248502 | chr11_33074746_+ | intronic |
| ADediting_248503 | chr11_33074748_+ | intronic |
| ADediting_248504 | chr11_33074752_+ | intronic |
| ADediting_248505 | chr11_33074765_+ | intronic |
| ADediting_248506 | chr11_33074769_+ | intronic |
| ADediting_248507 | chr11_33074770_+ | intronic |
| ADediting_248508 | chr11_33074783_+ | intronic |
| ADediting_248509 | chr11_33074786_+ | intronic |
| ADediting_248510 | chr11_33074802_+ | intronic |
| ADediting_248511 | chr11_33074806_+ | intronic |
| ADediting_248512 | chr11_33074818_+ | intronic |
| ADediting_248513 | chr11_33074836_+ | intronic |
| ADediting_248514 | chr11_33074841_+ | intronic |
| ADediting_248515 | chr11_33074842_+ | intronic |
| ADediting_248516 | chr11_33074843_+ | intronic |
| ADediting_248517 | chr11_33074849_+ | intronic |
| ADediting_248518 | chr11_33074859_+ | intronic |
| ADediting_248519 | chr11_33074862_+ | intronic |
| ADediting_248520 | chr11_33074875_+ | intronic |
| ADediting_248521 | chr11_33074880_+ | intronic |
| ADediting_248522 | chr11_33074883_+ | intronic |
| ADediting_248523 | chr11_33074886_+ | intronic |
| ADediting_248524 | chr11_33074889_+ | intronic |
| ADediting_248525 | chr11_33075230_+ | intronic |
| ADediting_248526 | chr11_33075250_+ | intronic |
| ADediting_248527 | chr11_33075275_+ | intronic |
| ADediting_248528 | chr11_33075280_+ | intronic |
| ADediting_248529 | chr11_33075285_+ | intronic |
| ADediting_248530 | chr11_33075290_+ | intronic |
| ADediting_248531 | chr11_33075291_+ | intronic |
| ADediting_248532 | chr11_33075297_+ | intronic |
| ADediting_248533 | chr11_33075310_+ | intronic |
| ADediting_248534 | chr11_33075311_+ | intronic |
| ADediting_248535 | chr11_33075328_+ | intronic |
| ADediting_248536 | chr11_33075340_+ | intronic |
| ADediting_248537 | chr11_33075350_+ | intronic |
| ADediting_248538 | chr11_33075352_+ | intronic |
| ADediting_248539 | chr11_33075356_+ | intronic |
| ADediting_248540 | chr11_33075363_+ | intronic |
| ADediting_248541 | chr11_33075376_+ | intronic |
| ADediting_248542 | chr11_33075377_+ | intronic |
| ADediting_248543 | chr11_33075391_+ | intronic |
| ADediting_248544 | chr11_33075394_+ | intronic |
| ADediting_248545 | chr11_33075408_+ | intronic |
| ADediting_248546 | chr11_33075411_+ | intronic |
| ADediting_248547 | chr11_33075420_+ | intronic |
| ADediting_248548 | chr11_33075452_+ | intronic |
| ADediting_248549 | chr11_33075470_+ | intronic |
| ADediting_248550 | chr11_33075484_+ | intronic |
| ADediting_248551 | chr11_33075486_+ | intronic |
| ADediting_248552 | chr11_33075502_+ | intronic |
| ADediting_248553 | chr11_33076788_+ | ncRNA_exonic |
| ADediting_248554 | chr11_33076804_+ | ncRNA_exonic |
| ADediting_248555 | chr11_33076817_+ | ncRNA_exonic |
| ADediting_248556 | chr11_33076841_+ | ncRNA_exonic |
| ADediting_248557 | chr11_33076853_+ | ncRNA_exonic |
| ADediting_248558 | chr11_33076863_+ | ncRNA_exonic |
| ADediting_248559 | chr11_33076906_+ | ncRNA_exonic |
| ADediting_248560 | chr11_33076909_+ | ncRNA_exonic |
| ADediting_248561 | chr11_33076931_+ | ncRNA_exonic |
| ADediting_248562 | chr11_33076935_+ | ncRNA_exonic |
| ADediting_248563 | chr11_33076967_+ | ncRNA_exonic |
| ADediting_248564 | chr11_33076986_+ | ncRNA_exonic |
| ADediting_1526684 | chr11_33041671_+ | intronic |
| ADediting_1526685 | chr11_33042211_+ | intronic |
| ADediting_1526686 | chr11_33042341_+ | intronic |
| ADediting_1526687 | chr11_33042962_+ | intronic |
| ADediting_1526688 | chr11_33043088_+ | intronic |
| ADediting_1526689 | chr11_33074033_+ | intronic |
| ADediting_1526690 | chr11_33074119_+ | intronic |
| ADediting_1526691 | chr11_33074782_+ | intronic |
| ADediting_1609472 | chr11_33042195_+ | intronic |
| ADediting_1609473 | chr11_33052872_+ | intronic |
| ADediting_1609474 | chr11_33073984_+ | intronic |
| ADediting_1609475 | chr11_33074772_+ | intronic |
| ADediting_1609476 | chr11_33074868_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_248357 | chr11_33041604_+ | SINE | Alu | Name=AluSx1 |
| ADediting_248358 | chr11_33041636_+ | SINE | Alu | Name=AluSx1 |
| ADediting_248359 | chr11_33041659_+ | SINE | Alu | Name=AluSx1 |
| ADediting_248360 | chr11_33041660_+ | SINE | Alu | Name=AluSx1 |
| ADediting_248361 | chr11_33041672_+ | SINE | Alu | Name=AluSx1 |
| ADediting_248362 | chr11_33041706_+ | SINE | Alu | Name=AluSx1 |
| ADediting_248363 | chr11_33042150_+ | SINE | Alu | Name=AluY |
| ADediting_248364 | chr11_33042162_+ | SINE | Alu | Name=AluY |
| ADediting_248365 | chr11_33042205_+ | SINE | Alu | Name=AluY |
| ADediting_248366 | chr11_33042260_+ | SINE | Alu | Name=AluY |
| ADediting_248367 | chr11_33042270_+ | SINE | Alu | Name=AluY |
| ADediting_248368 | chr11_33042272_+ | SINE | Alu | Name=AluY |
| ADediting_248369 | chr11_33042295_+ | SINE | Alu | Name=AluY |
| ADediting_248370 | chr11_33042312_+ | SINE | Alu | Name=AluY |
| ADediting_248371 | chr11_33042337_+ | SINE | Alu | Name=AluY |
| ADediting_248372 | chr11_33042746_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248373 | chr11_33042747_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248374 | chr11_33042866_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248375 | chr11_33042879_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248376 | chr11_33042880_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248377 | chr11_33042919_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248378 | chr11_33042943_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248379 | chr11_33042945_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248380 | chr11_33042946_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248381 | chr11_33043001_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248382 | chr11_33043010_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248383 | chr11_33043011_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248384 | chr11_33043012_+ | SINE | Alu | Name=AluSq4 |
| ADediting_248385 | chr11_33045099_+ | SINE | Alu | Name=AluJb |
| ADediting_248386 | chr11_33045102_+ | SINE | Alu | Name=AluJb |
| ADediting_248387 | chr11_33045135_+ | SINE | Alu | Name=AluJb |
| ADediting_248388 | chr11_33045153_+ | SINE | Alu | Name=AluJb |
| ADediting_248389 | chr11_33045164_+ | SINE | Alu | Name=AluJb |
| ADediting_248390 | chr11_33045174_+ | SINE | Alu | Name=AluJb |
| ADediting_248391 | chr11_33045230_+ | SINE | Alu | Name=AluJb |
| ADediting_248392 | chr11_33045254_+ | SINE | Alu | Name=AluJb |
| ADediting_248393 | chr11_33045336_+ | SINE | Alu | Name=AluJb |
| ADediting_248394 | chr11_33047013_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248395 | chr11_33047063_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248396 | chr11_33047067_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248397 | chr11_33047070_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248398 | chr11_33047076_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248399 | chr11_33047142_+ | SINE | Alu | Name=AluSq2 |
| ADediting_248400 | chr11_33048994_+ | SINE | Alu | Name=AluSc |
| ADediting_248401 | chr11_33049019_+ | SINE | Alu | Name=AluSc |
| ADediting_248402 | chr11_33049040_+ | SINE | Alu | Name=AluSc |
| ADediting_248403 | chr11_33049156_+ | SINE | Alu | Name=AluSc |
| ADediting_248404 | chr11_33051237_+ | SINE | Alu | Name=AluY |
| ADediting_248405 | chr11_33051248_+ | SINE | Alu | Name=AluY |
| ADediting_248406 | chr11_33051285_+ | SINE | Alu | Name=AluY |
| ADediting_248407 | chr11_33051349_+ | SINE | Alu | Name=AluY |
| ADediting_248408 | chr11_33051374_+ | SINE | Alu | Name=AluY |
| ADediting_248409 | chr11_33053201_+ | SINE | Alu | Name=AluSx |
| ADediting_248410 | chr11_33053225_+ | SINE | Alu | Name=AluSx |
| ADediting_248411 | chr11_33053262_+ | SINE | Alu | Name=AluSx |
| ADediting_248412 | chr11_33053916_+ | SINE | Alu | Name=AluJr |
| ADediting_248413 | chr11_33053934_+ | SINE | Alu | Name=AluJr |
| ADediting_248414 | chr11_33054053_+ | SINE | Alu | Name=AluJr |
| ADediting_248415 | chr11_33061826_+ | SINE | Alu | Name=AluSz6 |
| ADediting_248416 | chr11_33061852_+ | SINE | Alu | Name=AluSz6 |
| ADediting_248417 | chr11_33061879_+ | SINE | Alu | Name=AluSz6 |
| ADediting_248418 | chr11_33069618_+ | SINE | Alu | Name=AluJb |
| ADediting_248419 | chr11_33069626_+ | SINE | Alu | Name=AluJb |
| ADediting_248420 | chr11_33069699_+ | SINE | Alu | Name=AluJb |
| ADediting_248421 | chr11_33069706_+ | SINE | Alu | Name=AluJb |
| ADediting_248422 | chr11_33069709_+ | SINE | Alu | Name=AluJb |
| ADediting_248423 | chr11_33069718_+ | SINE | Alu | Name=AluJb |
| ADediting_248424 | chr11_33069723_+ | SINE | Alu | Name=AluJb |
| ADediting_248425 | chr11_33069731_+ | SINE | Alu | Name=AluJb |
| ADediting_248426 | chr11_33069732_+ | SINE | Alu | Name=AluJb |
| ADediting_248427 | chr11_33069735_+ | SINE | Alu | Name=AluJb |
| ADediting_248428 | chr11_33069791_+ | SINE | Alu | Name=AluJb |
| ADediting_248429 | chr11_33069816_+ | SINE | Alu | Name=AluJb |
| ADediting_248430 | chr11_33069827_+ | SINE | Alu | Name=AluJb |
| ADediting_248431 | chr11_33069842_+ | SINE | Alu | Name=AluJb |
| ADediting_248432 | chr11_33069859_+ | SINE | Alu | Name=AluJb |
| ADediting_248433 | chr11_33070061_+ | SINE | Alu | Name=AluJo |
| ADediting_248434 | chr11_33070135_+ | SINE | Alu | Name=AluJo |
| ADediting_248435 | chr11_33070144_+ | SINE | Alu | Name=AluJo |
| ADediting_248436 | chr11_33070160_+ | SINE | Alu | Name=AluJo |
| ADediting_248437 | chr11_33070183_+ | SINE | Alu | Name=AluJo |
| ADediting_248438 | chr11_33070187_+ | SINE | Alu | Name=AluJo |
| ADediting_248439 | chr11_33070196_+ | SINE | Alu | Name=AluJo |
| ADediting_248440 | chr11_33070226_+ | SINE | Alu | Name=AluJo |
| ADediting_248441 | chr11_33070268_+ | SINE | Alu | Name=AluJo |
| ADediting_248442 | chr11_33070437_+ | SINE | Alu | Name=AluSp |
| ADediting_248443 | chr11_33070461_+ | SINE | Alu | Name=AluSp |
| ADediting_248444 | chr11_33070538_+ | SINE | Alu | Name=AluSp |
| ADediting_248445 | chr11_33070587_+ | SINE | Alu | Name=AluSp |
| ADediting_248446 | chr11_33070881_+ | SINE | Alu | Name=AluSx |
| ADediting_248447 | chr11_33070882_+ | SINE | Alu | Name=AluSx |
| ADediting_248448 | chr11_33071086_+ | SINE | Alu | Name=AluSz |
| ADediting_248449 | chr11_33071113_+ | SINE | Alu | Name=AluSz |
| ADediting_248450 | chr11_33071159_+ | SINE | Alu | Name=AluSz |
| ADediting_248451 | chr11_33071915_+ | SINE | Alu | Name=AluSx |
| ADediting_248452 | chr11_33071920_+ | SINE | Alu | Name=AluSx |
| ADediting_248453 | chr11_33071946_+ | SINE | Alu | Name=AluSx |
| ADediting_248454 | chr11_33071975_+ | SINE | Alu | Name=AluSx |
| ADediting_248455 | chr11_33072003_+ | SINE | Alu | Name=AluSx |
| ADediting_248456 | chr11_33072020_+ | SINE | Alu | Name=AluSx |
| ADediting_248457 | chr11_33072026_+ | SINE | Alu | Name=AluSx |
| ADediting_248458 | chr11_33072029_+ | SINE | Alu | Name=AluSx |
| ADediting_248459 | chr11_33072096_+ | SINE | Alu | Name=AluSx |
| ADediting_248460 | chr11_33072118_+ | SINE | Alu | Name=AluSx |
| ADediting_248463 | chr11_33073953_+ | SINE | Alu | Name=AluSx |
| ADediting_248464 | chr11_33073959_+ | SINE | Alu | Name=AluSx |
| ADediting_248465 | chr11_33073961_+ | SINE | Alu | Name=AluSx |
| ADediting_248466 | chr11_33073962_+ | SINE | Alu | Name=AluSx |
| ADediting_248467 | chr11_33073988_+ | SINE | Alu | Name=AluSx |
| ADediting_248468 | chr11_33073992_+ | SINE | Alu | Name=AluSx |
| ADediting_248469 | chr11_33074007_+ | SINE | Alu | Name=AluSx |
| ADediting_248470 | chr11_33074031_+ | SINE | Alu | Name=AluSx |
| ADediting_248471 | chr11_33074039_+ | SINE | Alu | Name=AluSx |
| ADediting_248472 | chr11_33074040_+ | SINE | Alu | Name=AluSx |
| ADediting_248473 | chr11_33074041_+ | SINE | Alu | Name=AluSx |
| ADediting_248474 | chr11_33074046_+ | SINE | Alu | Name=AluSx |
| ADediting_248475 | chr11_33074057_+ | SINE | Alu | Name=AluSx |
| ADediting_248476 | chr11_33074061_+ | SINE | Alu | Name=AluSx |
| ADediting_248477 | chr11_33074070_+ | SINE | Alu | Name=AluSx |
| ADediting_248478 | chr11_33074086_+ | SINE | Alu | Name=AluSx |
| ADediting_248479 | chr11_33074096_+ | SINE | Alu | Name=AluSx |
| ADediting_248480 | chr11_33074097_+ | SINE | Alu | Name=AluSx |
| ADediting_248481 | chr11_33074106_+ | SINE | Alu | Name=AluSx |
| ADediting_248482 | chr11_33074129_+ | SINE | Alu | Name=AluSx |
| ADediting_248483 | chr11_33074138_+ | SINE | Alu | Name=AluSx |
| ADediting_248484 | chr11_33074149_+ | SINE | Alu | Name=AluSx |
| ADediting_248485 | chr11_33074158_+ | SINE | Alu | Name=AluSx |
| ADediting_248486 | chr11_33074167_+ | SINE | Alu | Name=AluSx |
| ADediting_248487 | chr11_33074169_+ | SINE | Alu | Name=AluSx |
| ADediting_248488 | chr11_33074171_+ | SINE | Alu | Name=AluSx |
| ADediting_248489 | chr11_33074174_+ | SINE | Alu | Name=AluSx |
| ADediting_248490 | chr11_33074180_+ | SINE | Alu | Name=AluSx |
| ADediting_248491 | chr11_33074657_+ | SINE | Alu | Name=AluJo |
| ADediting_248492 | chr11_33074672_+ | SINE | Alu | Name=AluJo |
| ADediting_248493 | chr11_33074674_+ | SINE | Alu | Name=AluJo |
| ADediting_248494 | chr11_33074675_+ | SINE | Alu | Name=AluJo |
| ADediting_248495 | chr11_33074696_+ | SINE | Alu | Name=AluJo |
| ADediting_248496 | chr11_33074697_+ | SINE | Alu | Name=AluJo |
| ADediting_248497 | chr11_33074701_+ | SINE | Alu | Name=AluJo |
| ADediting_248498 | chr11_33074728_+ | SINE | Alu | Name=AluJo |
| ADediting_248499 | chr11_33074729_+ | SINE | Alu | Name=AluJo |
| ADediting_248500 | chr11_33074739_+ | SINE | Alu | Name=AluJo |
| ADediting_248501 | chr11_33074744_+ | SINE | Alu | Name=AluJo |
| ADediting_248502 | chr11_33074746_+ | SINE | Alu | Name=AluJo |
| ADediting_248503 | chr11_33074748_+ | SINE | Alu | Name=AluJo |
| ADediting_248504 | chr11_33074752_+ | SINE | Alu | Name=AluJo |
| ADediting_248505 | chr11_33074765_+ | SINE | Alu | Name=AluJo |
| ADediting_248506 | chr11_33074769_+ | SINE | Alu | Name=AluJo |
| ADediting_248507 | chr11_33074770_+ | SINE | Alu | Name=AluJo |
| ADediting_248508 | chr11_33074783_+ | SINE | Alu | Name=AluJo |
| ADediting_248509 | chr11_33074786_+ | SINE | Alu | Name=AluJo |
| ADediting_248510 | chr11_33074802_+ | SINE | Alu | Name=AluJo |
| ADediting_248511 | chr11_33074806_+ | SINE | Alu | Name=AluJo |
| ADediting_248512 | chr11_33074818_+ | SINE | Alu | Name=AluJo |
| ADediting_248513 | chr11_33074836_+ | SINE | Alu | Name=AluJo |
| ADediting_248514 | chr11_33074841_+ | SINE | Alu | Name=AluJo |
| ADediting_248515 | chr11_33074842_+ | SINE | Alu | Name=AluJo |
| ADediting_248516 | chr11_33074843_+ | SINE | Alu | Name=AluJo |
| ADediting_248517 | chr11_33074849_+ | SINE | Alu | Name=AluJo |
| ADediting_248518 | chr11_33074859_+ | SINE | Alu | Name=AluJo |
| ADediting_248519 | chr11_33074862_+ | SINE | Alu | Name=AluJo |
| ADediting_248520 | chr11_33074875_+ | SINE | Alu | Name=AluJo |
| ADediting_248521 | chr11_33074880_+ | SINE | Alu | Name=AluJo |
| ADediting_248522 | chr11_33074883_+ | SINE | Alu | Name=AluJo |
| ADediting_248523 | chr11_33074886_+ | SINE | Alu | Name=AluJo |
| ADediting_248524 | chr11_33074889_+ | SINE | Alu | Name=AluJo |
| ADediting_248525 | chr11_33075230_+ | SINE | Alu | Name=AluSg |
| ADediting_248526 | chr11_33075250_+ | SINE | Alu | Name=AluSg |
| ADediting_248527 | chr11_33075275_+ | SINE | Alu | Name=AluSg |
| ADediting_248528 | chr11_33075280_+ | SINE | Alu | Name=AluSg |
| ADediting_248529 | chr11_33075285_+ | SINE | Alu | Name=AluSg |
| ADediting_248530 | chr11_33075290_+ | SINE | Alu | Name=AluSg |
| ADediting_248531 | chr11_33075291_+ | SINE | Alu | Name=AluSg |
| ADediting_248532 | chr11_33075297_+ | SINE | Alu | Name=AluSg |
| ADediting_248533 | chr11_33075310_+ | SINE | Alu | Name=AluSg |
| ADediting_248534 | chr11_33075311_+ | SINE | Alu | Name=AluSg |
| ADediting_248535 | chr11_33075328_+ | SINE | Alu | Name=AluSg |
| ADediting_248536 | chr11_33075340_+ | SINE | Alu | Name=AluSg |
| ADediting_248537 | chr11_33075350_+ | SINE | Alu | Name=AluSg |
| ADediting_248538 | chr11_33075352_+ | SINE | Alu | Name=AluSg |
| ADediting_248539 | chr11_33075356_+ | SINE | Alu | Name=AluSg |
| ADediting_248540 | chr11_33075363_+ | SINE | Alu | Name=AluSg |
| ADediting_248541 | chr11_33075376_+ | SINE | Alu | Name=AluSg |
| ADediting_248542 | chr11_33075377_+ | SINE | Alu | Name=AluSg |
| ADediting_248543 | chr11_33075391_+ | SINE | Alu | Name=AluSg |
| ADediting_248544 | chr11_33075394_+ | SINE | Alu | Name=AluSg |
| ADediting_248545 | chr11_33075408_+ | SINE | Alu | Name=AluSg |
| ADediting_248546 | chr11_33075411_+ | SINE | Alu | Name=AluSg |
| ADediting_248547 | chr11_33075420_+ | SINE | Alu | Name=AluSg |
| ADediting_248548 | chr11_33075452_+ | SINE | Alu | Name=AluSg |
| ADediting_248549 | chr11_33075470_+ | SINE | Alu | Name=AluSg |
| ADediting_248550 | chr11_33075484_+ | SINE | Alu | Name=AluSg |
| ADediting_248551 | chr11_33075486_+ | SINE | Alu | Name=AluSg |
| ADediting_248552 | chr11_33075502_+ | SINE | Alu | Name=AluSg |
| ADediting_248553 | chr11_33076788_+ | SINE | Alu | Name=AluY |
| ADediting_248554 | chr11_33076804_+ | SINE | Alu | Name=AluY |
| ADediting_248555 | chr11_33076817_+ | SINE | Alu | Name=AluY |
| ADediting_248556 | chr11_33076841_+ | SINE | Alu | Name=AluY |
| ADediting_248557 | chr11_33076853_+ | SINE | Alu | Name=AluY |
| ADediting_248558 | chr11_33076863_+ | SINE | Alu | Name=AluY |
| ADediting_248559 | chr11_33076906_+ | SINE | Alu | Name=AluY |
| ADediting_248560 | chr11_33076909_+ | SINE | Alu | Name=AluY |
| ADediting_248561 | chr11_33076931_+ | SINE | Alu | Name=AluY |
| ADediting_248562 | chr11_33076935_+ | SINE | Alu | Name=AluY |
| ADediting_248563 | chr11_33076967_+ | SINE | Alu | Name=AluY |
| ADediting_248564 | chr11_33076986_+ | SINE | Alu | Name=AluY |
| ADediting_1526684 | chr11_33041671_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1526685 | chr11_33042211_+ | SINE | Alu | Name=AluY |
| ADediting_1526686 | chr11_33042341_+ | SINE | Alu | Name=AluY |
| ADediting_1526687 | chr11_33042962_+ | SINE | Alu | Name=AluSq4 |
| ADediting_1526688 | chr11_33043088_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1526689 | chr11_33074033_+ | SINE | Alu | Name=AluSx |
| ADediting_1526690 | chr11_33074119_+ | SINE | Alu | Name=AluSx |
| ADediting_1526691 | chr11_33074782_+ | SINE | Alu | Name=AluJo |
| ADediting_1609472 | chr11_33042195_+ | SINE | Alu | Name=AluY |
| ADediting_1609473 | chr11_33052872_+ | SINE | Alu | Name=AluJb |
| ADediting_1609474 | chr11_33073984_+ | SINE | Alu | Name=AluSx |
| ADediting_1609475 | chr11_33074772_+ | SINE | Alu | Name=AluJo |
| ADediting_1609476 | chr11_33074868_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for TCP11L1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCP11L1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TCP11L1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for TCP11L1 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1631458 | chr19_40282624_- | ENSG00000176148.16 | ENST00000334274.9 | TCP11L1-201 | hsa-miR-641 | chr11 | 33072960 | 33072966 | 7mer-m8 | 33072946 | 33072967 | 146 | -15.05 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000176148.16 | ENST00000432887.5 | TCP11L1-202 | hsa-miR-641 | chr11 | 33072960 | 33072966 | 7mer-m8 | 33072946 | 33072967 | 146 | -15.05 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000176148.16 | ENST00000334274.9 | TCP11L1-201 | hsa-miR-589-3p | chr11 | 33072725 | 33072731 | 7mer-m8 | 33072708 | 33072732 | 141 | -12.44 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000176148.16 | ENST00000432887.5 | TCP11L1-202 | hsa-miR-589-3p | chr11 | 33072725 | 33072731 | 7mer-m8 | 33072708 | 33072732 | 141 | -12.44 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000176148.16 | ENST00000531632.6 | TCP11L1-209 | hsa-miR-589-3p | chr11 | 33072725 | 33072731 | 7mer-m8 | 33072708 | 33072732 | 141 | -12.44 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000176148.16 | ENST00000334274.9 | TCP11L1-201 | hsa-miR-4775 | chr11 | 33073348 | 33073354 | 7mer-m8 | 33073334 | 33073355 | 148 | -2.79 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000176148.16 | ENST00000432887.5 | TCP11L1-202 | hsa-miR-4775 | chr11 | 33073348 | 33073354 | 7mer-m8 | 33073334 | 33073355 | 148 | -2.79 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for TCP11L1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TCP11L1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_248389 | chr11_33045164_+ | 0.235667530198834 | -0.0675496971350886 | 0.00405772268528491 | -0.162779395087928 | 2.20581041812471e-08 | 0.311112567193264 |
| DLPFC | ADediting_248451 | chr11_33071915_+ | 0.483498943283224 | 0.0399417666222455 | 0.447554251969123 | -0.0432912902289466 | 6.71204789637125e-12 | 0.37688342668861 |
| PCC | ADediting_248461 | chr11_33073863_+ | 1.76404511386942e-05 | 0.305179560528851 | 0.00112578739977086 | 0.233928451707564 | 0.159077304355966 | 0.102296448721575 |
| TCX | ADediting_248461 | chr11_33073863_+ | 0.00139425592341681 | 0.258647787401206 | 8.44248906810703e-05 | 0.315409360919948 | 0.0184899766465329 | -0.192150144419387 |
| STG | ADediting_248461 | chr11_33073863_+ | 9.0691577069189e-06 | 0.463332403208634 | 0.0119617999311099 | 0.273078519074058 | 0.703641344107087 | 0.0421187718930086 |
| CER | ADediting_248464 | chr11_33073959_+ | 3.24147644673271e-06 | 0.369615175406605 | 1.7060534761898e-06 | 0.379208355681386 | 0.00142678256455623 | 0.258127169037903 |
| CER | ADediting_248467 | chr11_33073988_+ | 1.02406084890285e-08 | 0.446479651062153 | 4.49355892263158e-09 | 0.456062503737155 | 0.0152334248488278 | 0.197838326931437 |
| CER | ADediting_248468 | chr11_33073992_+ | 2.94602123487856e-10 | 0.485807230111147 | 2.08686275355755e-09 | 0.464727161839941 | 0.286878800271418 | 0.0875215396170899 |
| CER | ADediting_248473 | chr11_33074041_+ | 3.0796041746601e-06 | 0.370392197691402 | 3.39358779991769e-06 | 0.368917875910726 | 0.00134798423199885 | 0.259407842242816 |
| TCX | ADediting_248477 | chr11_33074070_+ | 8.00190600979124e-05 | 0.316387989961127 | 0.000687113948933588 | 0.274137461190868 | 0.627851416921263 | 0.0398979324782052 |
| IFG | ADediting_248477 | chr11_33074070_+ | 0.423203365291739 | 0.167618627154427 | 0.0456700150688935 | 0.403178219293277 | 0.441189286955359 | 0.161281739930397 |
| CER | ADediting_248478 | chr11_33074086_+ | 5.11811520669332e-05 | 0.3244190959087 | 0.00011242113396254 | 0.310121913015035 | 0.310077081727915 | 0.0834326763549708 |
| CER | ADediting_248482 | chr11_33074129_+ | 1.96885840761598e-06 | 0.377093369706839 | 7.60423021391959e-05 | 0.317315610085005 | 0.0401907665224774 | 0.167741683700368 |
| CER | ADediting_248484 | chr11_33074149_+ | 3.18538485699398e-05 | 0.332701565362425 | 2.39955029416651e-05 | 0.337538317867026 | 0.14810356086587 | 0.118661872377732 |
| CER | ADediting_248490 | chr11_33074180_+ | 0.0185329920149803 | 0.192081032681652 | 2.65237195595917e-06 | 0.372646053402012 | 0.00919490031618152 | 0.212024650276262 |
| STG | ADediting_248492 | chr11_33074672_+ | 0.00133915121361336 | 0.344352810874497 | 0.00085881815544975 | 0.356960804165658 | 0.900288178340198 | -0.0138783532097648 |
| CER | ADediting_248500 | chr11_33074739_+ | 2.77627041868924e-07 | 0.404806240791103 | 1.82522906144033e-09 | 0.466215999810606 | 0.00399696973986215 | 0.233711764383609 |
| STG | ADediting_248500 | chr11_33074739_+ | 0.0332098299642561 | 0.232639304839835 | 0.00311305264698704 | 0.31887637990147 | 0.381524311725446 | -0.0967052405804146 |
| CER | ADediting_248503 | chr11_33074748_+ | 1.05164592527082e-05 | 0.351181772306679 | 3.6690869183444e-08 | 0.43102274589581 | 0.024606187541891 | 0.183484119241496 |
| STG | ADediting_248503 | chr11_33074748_+ | 0.0488333758797509 | 0.215644340799781 | 0.00136363153673651 | 0.343827534154344 | 0.138482338372218 | -0.16300043291889 |
| CER | ADediting_248514 | chr11_33074841_+ | 0.000398121172502894 | 0.285494533148844 | 9.61193849649461e-07 | 0.387532922425118 | 0.0500869037104363 | 0.160274793461848 |
| CER | ADediting_248515 | chr11_33074842_+ | 2.00098361194954e-05 | 0.340597689260784 | 3.71265528360604e-09 | 0.458241776668167 | 0.652933912608172 | 0.0370140959784983 |
| CER | ADediting_248517 | chr11_33074849_+ | 0.000915749935947096 | 0.267959579046635 | 3.69167572865032e-06 | 0.367633447874985 | 0.235664199735991 | 0.0974122617398181 |
| STG | ADediting_248518 | chr11_33074859_+ | 0.0232329037289991 | 0.247474525551187 | 0.00141564577748783 | 0.342739218194777 | 0.0609443302597782 | -0.205351336031397 |
| TCX | ADediting_248522 | chr11_33074883_+ | 0.0428610172816666 | 0.165587570070253 | 3.2128640647633e-06 | 0.369749801213606 | 0.00233994088015531 | -0.246696449766186 |
| STG | ADediting_248522 | chr11_33074883_+ | 0.000371723473072718 | 0.379417422016572 | 8.86224699897503e-05 | 0.414490869730356 | 0.201416218742666 | -0.140803828163688 |
| CER | ADediting_248527 | chr11_33075275_+ | 0.00326344336277922 | 0.238708950690697 | 4.70638506416806e-05 | 0.325901374730862 | 0.377025151942951 | 0.0726408844002946 |
| CER | ADediting_248528 | chr11_33075280_+ | 3.23810742759156e-05 | 0.332418796043964 | 2.69557128711402e-09 | 0.461862473780894 | 0.506083966862576 | 0.0547097386947357 |
| TCX | ADediting_248528 | chr11_33075280_+ | 0.00197352969842365 | 0.250689577184679 | 7.2456488529837e-11 | 0.50007479512014 | 0.000156175313684486 | -0.303927434765946 |
| CER | ADediting_248531 | chr11_33075291_+ | 3.3444346939141e-08 | 0.432171195416307 | 1.30333991948304e-08 | 0.443617236909907 | 0.531638232014658 | -0.051469144205728 |
| TCX | ADediting_248531 | chr11_33075291_+ | 0.000535344155148749 | 0.279391248231863 | 3.03827403148935e-15 | 0.58669890284622 | 4.02394722962062e-05 | -0.328649818317416 |
| IFG | ADediting_248531 | chr11_33075291_+ | 0.178625641071446 | 0.277892778349701 | 0.0281971498246555 | 0.438834412076213 | 0.346591926880527 | 0.1964586742173 |
| STG | ADediting_248531 | chr11_33075291_+ | 0.0495129305384516 | 0.215014191705119 | 0.000691037831042024 | 0.362947265978961 | 0.0398003892695752 | -0.224796500223953 |
| CER | ADediting_248532 | chr11_33075297_+ | 0.00402467129925348 | 0.233539739914205 | 3.7664701813117e-05 | 0.329802094915727 | 0.0633667793996227 | 0.151981057563268 |
| STG | ADediting_248533 | chr11_33075310_+ | 0.00430453180328986 | 0.308486082492065 | 0.0541215188768846 | 0.210918802952392 | 0.930403047541153 | 0.00967406370505583 |
| CER | ADediting_248534 | chr11_33075311_+ | 1.37821866681439e-11 | 0.516146886378093 | 6.09558106200115e-10 | 0.478144304842392 | 0.00313657515342739 | 0.239674541576379 |
| TCX | ADediting_248534 | chr11_33075311_+ | 7.20180735335176e-08 | 0.422531785622645 | 4.08107520532029e-06 | 0.366096358455278 | 0.670258037882798 | 0.0350484369807837 |
| STG | ADediting_248534 | chr11_33075311_+ | 0.000799992410428726 | 0.358927740917667 | 0.00135990973541378 | 0.343906840118637 | 0.869509408821976 | -0.0181957615339719 |
| CER | ADediting_248537 | chr11_33075350_+ | 3.47671798648911e-15 | 0.585691581468231 | 2.17246403174739e-11 | 0.511822656560806 | 0.0788117935230523 | 0.143965041911777 |
| TCX | ADediting_248537 | chr11_33075350_+ | 3.20088977684831e-05 | 0.332617953052803 | 2.53491628443827e-06 | 0.373326266726464 | 0.961815913890439 | -0.00394193328022227 |
| CER | ADediting_248539 | chr11_33075356_+ | 1.75516486691143e-09 | 0.466649702136947 | 3.75342096551229e-09 | 0.458117522140267 | 0.0328129507632095 | 0.174391313536593 |
| CER | ADediting_248540 | chr11_33075363_+ | 1.94858857782084e-07 | 0.409556332548511 | 4.12181709749275e-07 | 0.399415040110071 | 0.00125235382016146 | 0.261057274265452 |
| CER | ADediting_248543 | chr11_33075391_+ | 3.71807577483765e-09 | 0.458225179363613 | 4.53111034002815e-08 | 0.428390817544821 | 0.00532468247570384 | 0.226464175229587 |
| CER | ADediting_248544 | chr11_33075394_+ | 2.3832043956433e-08 | 0.436335753317152 | 1.7552456400182e-08 | 0.440047081657686 | 0.113058327587728 | 0.129919518032173 |
| CER | ADediting_248545 | chr11_33075408_+ | 4.43394995029956e-06 | 0.364819198199703 | 7.81293118065991e-08 | 0.421490322867446 | 0.00408322618962468 | 0.233179592282379 |
| CER | ADediting_248546 | chr11_33075411_+ | 4.90842595203032e-05 | 0.325159424898117 | 7.14347216832342e-06 | 0.357366316520432 | 0.0916715068717976 | 0.138208510000154 |
| TCX | ADediting_248546 | chr11_33075411_+ | 0.00149389958732153 | 0.257086269787536 | 1.61343069633162e-10 | 0.492012380515365 | 0.0177247060552053 | -0.193403583149295 |
| CER | ADediting_248547 | chr11_33075420_+ | 1.47073268633511e-07 | 0.413279737387262 | 3.57146558480795e-08 | 0.431357472179555 | 0.0990798919486429 | 0.135179265374254 |
| STG | ADediting_248547 | chr11_33075420_+ | 0.00156443884586091 | 0.339814554419429 | 0.00846125059020436 | 0.285563529414692 | 0.424187893110075 | -0.0883504655522546 |
| CER | ADediting_248550 | chr11_33075484_+ | 0.000276952688459734 | 0.292790819283029 | 5.2426540197102e-05 | 0.323992756271917 | 0.0273050652192364 | 0.180240546466516 |
| TCX | ADediting_248550 | chr11_33075484_+ | 2.07386570908672e-05 | 0.339997667430582 | 0.000242373967125056 | 0.295423899826925 | 0.595773205114835 | -0.0436587776387507 |
| STG | ADediting_248550 | chr11_33075484_+ | 0.00876624043784904 | 0.284311235323184 | 0.00412519833319094 | 0.309871339191664 | 0.108810859401912 | -0.176231120585188 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.63838423021582e-43 | 0.680585217015951 | 1.47488324318637e-26 | 0.556063246504373 | 0.219768091043834 | 0.0698942436123248 |
| PCC | 3.4769204428039e-17 | 0.560375754107737 | 1.35549178247373e-15 | 0.535941156519292 | 0.835865724343536 | -0.0150895473854629 |
| CER | 9.57852117302974e-73 | 0.943257974979934 | 3.13340641570469e-38 | 0.823312997020136 | 0.000321871365291128 | 0.289792607462365 |
| TCX | 3.74971303363602e-57 | 0.9060763882935 | 6.36881221390024e-16 | 0.59812666582054 | 0.00494060324156539 | 0.22837686992925 |
| FP | 1.03941371103267e-36 | 0.773600438806328 | 9.2091713175886e-44 | 0.816040611920808 | 0.0932452117140801 | 0.12619615847323 |
| IFG | 3.3505088298243e-06 | 0.785143217037653 | 6.69965825344169e-05 | 0.711365926948878 | 0.979888900041956 | -0.00531366132032722 |
| PG | 2.81683337503544e-63 | 0.885867073917357 | 1.37356815784088e-51 | 0.843664562397297 | 0.478169789384704 | -0.0523217629146776 |
| STG | 4.07371257201156e-30 | 0.892678641623674 | 1.66547814290937e-20 | 0.807670425661693 | 0.456266909187382 | 0.0823831295631976 |
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Relation with AD stages for TCP11L1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_248490 | chr11_33074180_+ | 5.95459624814424e-05 | 0.376379980515254 |
| CER | ADediting_248503 | chr11_33074748_+ | 0.000340848200317493 | 0.338397776017672 |
| CER | ADediting_248515 | chr11_33074842_+ | 0.000353837947467348 | 0.337528724019367 |
| CER | ADediting_248544 | chr11_33075394_+ | 0.000449711703006805 | 0.331896421400341 |
| IFG | ADediting_248479 | chr11_33074096_+ | 0.00140182860023715 | -0.603554304178904 |
| IFG | ADediting_248516 | chr11_33074843_+ | 0.0461072461867449 | -0.402437001976415 |
| IFG | ADediting_248535 | chr11_33075328_+ | 0.0352114321263704 | 0.422844993284526 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 8.80093469877138e-05 | 0.36827763864709 |
| TCX | 0.00028350145492732 | 0.345731730493172 |
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RelatedDrugs for TCP11L1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TCP11L1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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