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	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene

Gene summary for AP5S1

Gene summary

Gene information	Gene symbol	AP5S1
	Gene ID	55317
	Gene name	adaptor related protein complex 5 subunit sigma 1
	Synonyms	C20orf29
	Cytomap	20p13
	Type of gene	protein-coding
	Description	AP-5 complex subunit sigma-1adapter-related protein complex 5 sigma subunitadaptor related protein complex 5 sigma 1 subunitadaptor-related protein complex 5 sigma subunitprotein C20orf29sigma5
	Modification date	20200313
	UniProtAcc	Q9NUS5,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for AP5S1

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_932718(3824655, +), ADediting_932719(3824677, +), ADediting_932720(3824678, +), ADediting_932721(3824683, +), ADediting_932722(3824686, +), ADediting_932723(3824713, +), ADediting_932724(3824718, +), ADediting_932725(3824731, +), ADediting_932726(3824732, +), ADediting_932727(3824734, +), ADediting_932728(3824737, +), ADediting_932729(3824746, +), ADediting_932730(3824747, +), ADediting_932731(3824749, +), ADediting_932732(3824751, +), ADediting_932733(3824755, +), ADediting_932734(3824756, +), ADediting_932735(3824757, +), ADediting_932736(3824762, +), ADediting_932737(3824768, +), ADediting_932738(3824771, +), ADediting_932739(3824772, +), ADediting_932740(3824774, +), ADediting_932741(3824777, +), ADediting_932742(3824780, +), ADediting_932743(3824781, +), ADediting_932744(3824782, +), ADediting_932745(3824783, +), ADediting_932747(3824786, +), ADediting_932749(3824796, +), ADediting_932750(3824805, +), ADediting_932752(3824811, +), ADediting_932754(3824812, +), ADediting_932755(3824825, +), ADediting_932756(3824834, +), ADediting_932757(3824844, +), ADediting_932758(3824847, +), ADediting_932759(3824852, +), ADediting_932760(3824853, +), ADediting_932761(3824860, +), ADediting_932762(3824864, +), ADediting_932763(3824873, +), ADediting_932764(3824877, +), ADediting_932766(3824892, +), ADediting_932772(3824914, +), ADediting_932818(3827320, +), ADediting_932819(3827329, +), ADediting_932820(3827344, +), ADediting_932821(3827345, +), ADediting_932822(3827379, +), ADediting_932823(3827387, +), ADediting_932824(3827388, +), ADediting_932825(3827401, +), ADediting_932826(3827443, +), ADediting_932827(3827446, +), ADediting_932828(3827468, +), ADediting_932829(3827522, +), ADediting_932830(3827523, +), ADediting_932831(3827526, +), ADediting_932832(3827535, +), ADediting_932833(3827826, +), ADediting_932834(3827836, +), ADediting_932835(3827861, +), ADediting_932836(3827862, +), ADediting_932837(3827865, +), ADediting_932838(3827879, +), ADediting_932839(3827887, +), ADediting_932840(3827901, +), ADediting_932841(3827904, +), ADediting_932842(3827927, +), ADediting_932843(3827928, +), ADediting_932844(3827936, +), ADediting_932845(3827942, +), ADediting_932846(3827945, +), ADediting_932847(3827951, +), ADediting_932848(3827984, +), ADediting_932849(3828023, +), ADediting_932850(3828024, +), ADediting_932851(3828031, +), ADediting_932852(3828036, +),

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RNA editing positional annotations for AP5S1 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_932718	chr20_3824655_+	UTR3
ADediting_932719	chr20_3824677_+	UTR3
ADediting_932720	chr20_3824678_+	UTR3
ADediting_932721	chr20_3824683_+	UTR3
ADediting_932722	chr20_3824686_+	UTR3
ADediting_932723	chr20_3824713_+	UTR3
ADediting_932724	chr20_3824718_+	UTR3
ADediting_932725	chr20_3824731_+	UTR3
ADediting_932726	chr20_3824732_+	UTR3
ADediting_932727	chr20_3824734_+	UTR3
ADediting_932728	chr20_3824737_+	UTR3
ADediting_932729	chr20_3824746_+	UTR3
ADediting_932730	chr20_3824747_+	UTR3
ADediting_932731	chr20_3824749_+	UTR3
ADediting_932732	chr20_3824751_+	UTR3
ADediting_932733	chr20_3824755_+	UTR3
ADediting_932734	chr20_3824756_+	UTR3
ADediting_932735	chr20_3824757_+	UTR3
ADediting_932736	chr20_3824762_+	UTR3
ADediting_932737	chr20_3824768_+	UTR3
ADediting_932738	chr20_3824771_+	UTR3
ADediting_932739	chr20_3824772_+	UTR3
ADediting_932740	chr20_3824774_+	UTR3
ADediting_932741	chr20_3824777_+	UTR3
ADediting_932742	chr20_3824780_+	UTR3
ADediting_932743	chr20_3824781_+	UTR3
ADediting_932744	chr20_3824782_+	UTR3
ADediting_932745	chr20_3824783_+	UTR3
ADediting_932747	chr20_3824786_+	UTR3
ADediting_932749	chr20_3824796_+	UTR3
ADediting_932750	chr20_3824805_+	UTR3
ADediting_932752	chr20_3824811_+	UTR3
ADediting_932754	chr20_3824812_+	UTR3
ADediting_932755	chr20_3824825_+	UTR3
ADediting_932756	chr20_3824834_+	UTR3
ADediting_932757	chr20_3824844_+	UTR3
ADediting_932758	chr20_3824847_+	UTR3
ADediting_932759	chr20_3824852_+	UTR3
ADediting_932760	chr20_3824853_+	UTR3
ADediting_932761	chr20_3824860_+	UTR3
ADediting_932762	chr20_3824864_+	UTR3
ADediting_932763	chr20_3824873_+	UTR3
ADediting_932764	chr20_3824877_+	UTR3
ADediting_932766	chr20_3824892_+	UTR3
ADediting_932772	chr20_3824914_+	UTR3
ADediting_932818	chr20_3827320_+	UTR3
ADediting_932819	chr20_3827329_+	UTR3
ADediting_932820	chr20_3827344_+	UTR3
ADediting_932821	chr20_3827345_+	UTR3
ADediting_932822	chr20_3827379_+	UTR3
ADediting_932823	chr20_3827387_+	UTR3
ADediting_932824	chr20_3827388_+	UTR3
ADediting_932825	chr20_3827401_+	UTR3
ADediting_932826	chr20_3827443_+	UTR3
ADediting_932827	chr20_3827446_+	UTR3
ADediting_932828	chr20_3827468_+	UTR3
ADediting_932829	chr20_3827522_+	UTR3
ADediting_932830	chr20_3827523_+	UTR3
ADediting_932831	chr20_3827526_+	UTR3
ADediting_932832	chr20_3827535_+	UTR3
ADediting_932833	chr20_3827826_+	UTR3
ADediting_932834	chr20_3827836_+	UTR3
ADediting_932835	chr20_3827861_+	UTR3
ADediting_932836	chr20_3827862_+	UTR3
ADediting_932837	chr20_3827865_+	UTR3
ADediting_932838	chr20_3827879_+	UTR3
ADediting_932839	chr20_3827887_+	UTR3
ADediting_932840	chr20_3827901_+	UTR3
ADediting_932841	chr20_3827904_+	UTR3
ADediting_932842	chr20_3827927_+	UTR3
ADediting_932843	chr20_3827928_+	UTR3
ADediting_932844	chr20_3827936_+	UTR3
ADediting_932845	chr20_3827942_+	UTR3
ADediting_932846	chr20_3827945_+	UTR3
ADediting_932847	chr20_3827951_+	UTR3
ADediting_932848	chr20_3827984_+	UTR3
ADediting_932849	chr20_3828023_+	UTR3
ADediting_932850	chr20_3828024_+	UTR3
ADediting_932851	chr20_3828031_+	UTR3
ADediting_932852	chr20_3828036_+	UTR3

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_932718	chr20_3824655_+	SINE	Alu	Name=AluSx
ADediting_932719	chr20_3824677_+	SINE	Alu	Name=AluSx
ADediting_932720	chr20_3824678_+	SINE	Alu	Name=AluSx
ADediting_932721	chr20_3824683_+	SINE	Alu	Name=AluSx
ADediting_932722	chr20_3824686_+	SINE	Alu	Name=AluSx
ADediting_932723	chr20_3824713_+	SINE	Alu	Name=AluSx
ADediting_932724	chr20_3824718_+	SINE	Alu	Name=AluSx
ADediting_932725	chr20_3824731_+	SINE	Alu	Name=AluSx
ADediting_932726	chr20_3824732_+	SINE	Alu	Name=AluSx
ADediting_932727	chr20_3824734_+	SINE	Alu	Name=AluSx
ADediting_932728	chr20_3824737_+	SINE	Alu	Name=AluSx
ADediting_932729	chr20_3824746_+	SINE	Alu	Name=AluSx
ADediting_932730	chr20_3824747_+	SINE	Alu	Name=AluSx
ADediting_932731	chr20_3824749_+	SINE	Alu	Name=AluSx
ADediting_932732	chr20_3824751_+	SINE	Alu	Name=AluSx
ADediting_932733	chr20_3824755_+	SINE	Alu	Name=AluSx
ADediting_932734	chr20_3824756_+	SINE	Alu	Name=AluSx
ADediting_932735	chr20_3824757_+	SINE	Alu	Name=AluSx
ADediting_932736	chr20_3824762_+	SINE	Alu	Name=AluSx
ADediting_932737	chr20_3824768_+	SINE	Alu	Name=AluSx
ADediting_932738	chr20_3824771_+	SINE	Alu	Name=AluSx
ADediting_932739	chr20_3824772_+	SINE	Alu	Name=AluSx
ADediting_932740	chr20_3824774_+	SINE	Alu	Name=AluSx
ADediting_932741	chr20_3824777_+	SINE	Alu	Name=AluSx
ADediting_932742	chr20_3824780_+	SINE	Alu	Name=AluSx
ADediting_932743	chr20_3824781_+	SINE	Alu	Name=AluSx
ADediting_932744	chr20_3824782_+	SINE	Alu	Name=AluSx
ADediting_932745	chr20_3824783_+	SINE	Alu	Name=AluSx
ADediting_932747	chr20_3824786_+	SINE	Alu	Name=AluSx
ADediting_932749	chr20_3824796_+	SINE	Alu	Name=AluSx
ADediting_932750	chr20_3824805_+	SINE	Alu	Name=AluSx
ADediting_932752	chr20_3824811_+	SINE	Alu	Name=AluSx
ADediting_932754	chr20_3824812_+	SINE	Alu	Name=AluSx
ADediting_932755	chr20_3824825_+	SINE	Alu	Name=AluSx
ADediting_932756	chr20_3824834_+	SINE	Alu	Name=AluSx
ADediting_932757	chr20_3824844_+	SINE	Alu	Name=AluSx
ADediting_932758	chr20_3824847_+	SINE	Alu	Name=AluSx
ADediting_932759	chr20_3824852_+	SINE	Alu	Name=AluSx
ADediting_932760	chr20_3824853_+	SINE	Alu	Name=AluSx
ADediting_932761	chr20_3824860_+	SINE	Alu	Name=AluSx
ADediting_932762	chr20_3824864_+	SINE	Alu	Name=AluSx
ADediting_932763	chr20_3824873_+	SINE	Alu	Name=AluSx
ADediting_932764	chr20_3824877_+	SINE	Alu	Name=AluSx
ADediting_932766	chr20_3824892_+	SINE	Alu	Name=AluSx
ADediting_932772	chr20_3824914_+	SINE	Alu	Name=AluSx
ADediting_932818	chr20_3827320_+	SINE	Alu	Name=AluY
ADediting_932819	chr20_3827329_+	SINE	Alu	Name=AluY
ADediting_932820	chr20_3827344_+	SINE	Alu	Name=AluY
ADediting_932821	chr20_3827345_+	SINE	Alu	Name=AluY
ADediting_932822	chr20_3827379_+	SINE	Alu	Name=AluY
ADediting_932823	chr20_3827387_+	SINE	Alu	Name=AluY
ADediting_932824	chr20_3827388_+	SINE	Alu	Name=AluY
ADediting_932825	chr20_3827401_+	SINE	Alu	Name=AluY
ADediting_932826	chr20_3827443_+	SINE	Alu	Name=AluY
ADediting_932827	chr20_3827446_+	SINE	Alu	Name=AluY
ADediting_932828	chr20_3827468_+	SINE	Alu	Name=AluY
ADediting_932829	chr20_3827522_+	SINE	Alu	Name=AluY
ADediting_932830	chr20_3827523_+	SINE	Alu	Name=AluY
ADediting_932831	chr20_3827526_+	SINE	Alu	Name=AluY
ADediting_932832	chr20_3827535_+	SINE	Alu	Name=AluY
ADediting_932833	chr20_3827826_+	SINE	Alu	Name=AluSx
ADediting_932834	chr20_3827836_+	SINE	Alu	Name=AluSx
ADediting_932835	chr20_3827861_+	SINE	Alu	Name=AluSx
ADediting_932836	chr20_3827862_+	SINE	Alu	Name=AluSx
ADediting_932837	chr20_3827865_+	SINE	Alu	Name=AluSx
ADediting_932838	chr20_3827879_+	SINE	Alu	Name=AluSx
ADediting_932839	chr20_3827887_+	SINE	Alu	Name=AluSx
ADediting_932840	chr20_3827901_+	SINE	Alu	Name=AluSx
ADediting_932841	chr20_3827904_+	SINE	Alu	Name=AluSx
ADediting_932842	chr20_3827927_+	SINE	Alu	Name=AluSx
ADediting_932843	chr20_3827928_+	SINE	Alu	Name=AluSx
ADediting_932844	chr20_3827936_+	SINE	Alu	Name=AluSx
ADediting_932845	chr20_3827942_+	SINE	Alu	Name=AluSx
ADediting_932846	chr20_3827945_+	SINE	Alu	Name=AluSx
ADediting_932847	chr20_3827951_+	SINE	Alu	Name=AluSx
ADediting_932848	chr20_3827984_+	SINE	Alu	Name=AluSx
ADediting_932849	chr20_3828023_+	SINE	Alu	Name=AluSx
ADediting_932850	chr20_3828024_+	SINE	Alu	Name=AluSx
ADediting_932851	chr20_3828031_+	SINE	Alu	Name=AluSx
ADediting_932852	chr20_3828036_+	SINE	Alu	Name=AluSx

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RNA A-to-I editing events in the alternative splicing sites for AP5S1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for AP5S1

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs