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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CPPED1 |
 Gene summary |
| Gene information | Gene symbol | CPPED1 | Gene ID | 55313 |
| Gene name | calcineurin like phosphoesterase domain containing 1 | |
| Synonyms | CSTP1 | |
| Cytomap | 16p13.12 | |
| Type of gene | protein-coding | |
| Description | serine/threonine-protein phosphatase CPPED1calcineurin-like phosphoesterase domain-containing protein 1complete S-transactivated protein 1 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9BRF8, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for CPPED1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_517430(12660856, -), ADediting_517431(12660868, -), ADediting_517432(12660895, -), ADediting_517433(12660921, -), ADediting_517434(12660925, -), ADediting_517435(12661028, -), ADediting_517436(12661058, -), ADediting_517437(12661093, -), ADediting_517438(12661096, -), ADediting_517439(12661106, -), ADediting_517440(12661109, -), ADediting_517441(12663129, -), ADediting_517442(12663134, -), ADediting_517443(12663172, -), ADediting_517444(12663198, -), ADediting_517445(12663199, -), ADediting_517446(12663254, -), ADediting_517447(12663333, -), ADediting_517448(12663334, -), ADediting_517449(12663342, -), ADediting_517450(12663356, -), ADediting_517451(12685284, -), ADediting_517452(12687623, -), ADediting_517453(12687627, -), ADediting_517454(12688163, -), ADediting_517455(12688408, -), ADediting_517456(12688512, -), ADediting_517457(12688534, -), ADediting_517458(12688570, -), ADediting_517459(12689302, -), ADediting_517460(12691361, -), ADediting_517461(12693404, -), ADediting_517462(12693455, -), ADediting_517463(12693989, -), ADediting_517464(12696538, -), ADediting_517465(12696539, -), ADediting_517466(12696544, -), ADediting_517467(12696579, -), ADediting_517468(12696722, -), ADediting_517469(12697103, -), ADediting_517470(12697163, -), ADediting_517471(12697855, -), ADediting_517472(12697867, -), ADediting_517473(12697894, -), ADediting_517474(12697938, -), ADediting_517475(12697944, -), ADediting_517476(12697947, -), ADediting_517477(12697982, -), ADediting_517478(12697988, -), ADediting_517479(12698001, -), ADediting_517480(12698002, -), ADediting_517481(12698010, -), ADediting_517482(12698023, -), ADediting_517483(12698024, -), ADediting_517484(12698034, -), ADediting_517485(12698096, -), ADediting_517486(12698499, -), ADediting_517487(12698540, -), ADediting_517488(12698580, -), ADediting_517489(12698649, -), ADediting_517490(12698650, -), ADediting_517491(12698654, -), ADediting_517492(12698662, -), ADediting_517493(12698668, -), ADediting_517494(12698703, -), ADediting_517495(12698704, -), ADediting_517496(12700502, -), ADediting_517497(12700506, -), ADediting_517498(12700551, -), ADediting_517499(12700554, -), ADediting_517500(12700555, -), ADediting_517501(12700643, -), ADediting_517502(12700678, -), ADediting_517503(12700687, -), ADediting_517504(12701295, -), ADediting_517505(12701354, -), ADediting_517506(12701368, -), ADediting_517507(12701421, -), ADediting_517508(12701457, -), ADediting_517509(12701515, -), ADediting_517510(12702753, -), ADediting_517511(12702768, -), ADediting_517512(12702781, -), ADediting_517513(12702926, -), ADediting_517514(12726454, -), ADediting_517516(12733554, -), ADediting_517517(12734329, -), ADediting_517518(12737002, -), ADediting_517519(12737133, -), ADediting_517520(12737138, -), ADediting_517521(12737151, -), ADediting_517523(12741990, -), ADediting_517526(12764264, -), ADediting_517527(12764292, -), ADediting_517528(12764426, -), ADediting_517529(12764445, -), ADediting_517530(12767702, -), ADediting_517531(12767835, -), ADediting_517532(12767848, -), ADediting_517533(12769137, -), ADediting_517534(12770783, -), ADediting_517535(12776807, -), ADediting_517536(12776819, -), ADediting_517537(12776836, -), ADediting_517538(12776837, -), ADediting_517539(12778021, -), ADediting_517540(12778137, -), ADediting_517541(12778189, -), ADediting_517542(12778368, -), ADediting_517543(12779474, -), ADediting_517544(12780252, -), ADediting_517546(12786874, -), ADediting_1541005(12661063, -), ADediting_1623900(12686324, -), ADediting_1623901(12700568, -), ADediting_1623902(12773639, -), |
Top |
RNA editing positional annotations for CPPED1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_517430 | chr16_12660856_- | UTR3 |
| ADediting_517431 | chr16_12660868_- | UTR3 |
| ADediting_517432 | chr16_12660895_- | UTR3 |
| ADediting_517433 | chr16_12660921_- | UTR3 |
| ADediting_517434 | chr16_12660925_- | UTR3 |
| ADediting_517435 | chr16_12661028_- | UTR3 |
| ADediting_517436 | chr16_12661058_- | UTR3 |
| ADediting_517437 | chr16_12661093_- | UTR3 |
| ADediting_517438 | chr16_12661096_- | UTR3 |
| ADediting_517439 | chr16_12661106_- | UTR3 |
| ADediting_517440 | chr16_12661109_- | UTR3 |
| ADediting_517441 | chr16_12663129_- | UTR3 |
| ADediting_517442 | chr16_12663134_- | UTR3 |
| ADediting_517443 | chr16_12663172_- | UTR3 |
| ADediting_517444 | chr16_12663198_- | UTR3 |
| ADediting_517445 | chr16_12663199_- | UTR3 |
| ADediting_517446 | chr16_12663254_- | UTR3 |
| ADediting_517447 | chr16_12663333_- | UTR3 |
| ADediting_517448 | chr16_12663334_- | UTR3 |
| ADediting_517449 | chr16_12663342_- | UTR3 |
| ADediting_517450 | chr16_12663356_- | UTR3 |
| ADediting_517451 | chr16_12685284_- | intronic |
| ADediting_517452 | chr16_12687623_- | intronic |
| ADediting_517453 | chr16_12687627_- | intronic |
| ADediting_517454 | chr16_12688163_- | intronic |
| ADediting_517455 | chr16_12688408_- | intronic |
| ADediting_517456 | chr16_12688512_- | intronic |
| ADediting_517457 | chr16_12688534_- | intronic |
| ADediting_517458 | chr16_12688570_- | intronic |
| ADediting_517459 | chr16_12689302_- | intronic |
| ADediting_517460 | chr16_12691361_- | intronic |
| ADediting_517461 | chr16_12693404_- | intronic |
| ADediting_517462 | chr16_12693455_- | intronic |
| ADediting_517463 | chr16_12693989_- | intronic |
| ADediting_517464 | chr16_12696538_- | intronic |
| ADediting_517465 | chr16_12696539_- | intronic |
| ADediting_517466 | chr16_12696544_- | intronic |
| ADediting_517467 | chr16_12696579_- | intronic |
| ADediting_517468 | chr16_12696722_- | intronic |
| ADediting_517469 | chr16_12697103_- | intronic |
| ADediting_517470 | chr16_12697163_- | intronic |
| ADediting_517471 | chr16_12697855_- | intronic |
| ADediting_517472 | chr16_12697867_- | intronic |
| ADediting_517473 | chr16_12697894_- | intronic |
| ADediting_517474 | chr16_12697938_- | intronic |
| ADediting_517475 | chr16_12697944_- | intronic |
| ADediting_517476 | chr16_12697947_- | intronic |
| ADediting_517477 | chr16_12697982_- | intronic |
| ADediting_517478 | chr16_12697988_- | intronic |
| ADediting_517479 | chr16_12698001_- | intronic |
| ADediting_517480 | chr16_12698002_- | intronic |
| ADediting_517481 | chr16_12698010_- | intronic |
| ADediting_517482 | chr16_12698023_- | intronic |
| ADediting_517483 | chr16_12698024_- | intronic |
| ADediting_517484 | chr16_12698034_- | intronic |
| ADediting_517485 | chr16_12698096_- | intronic |
| ADediting_517486 | chr16_12698499_- | intronic |
| ADediting_517487 | chr16_12698540_- | intronic |
| ADediting_517488 | chr16_12698580_- | intronic |
| ADediting_517489 | chr16_12698649_- | intronic |
| ADediting_517490 | chr16_12698650_- | intronic |
| ADediting_517491 | chr16_12698654_- | intronic |
| ADediting_517492 | chr16_12698662_- | intronic |
| ADediting_517493 | chr16_12698668_- | intronic |
| ADediting_517494 | chr16_12698703_- | intronic |
| ADediting_517495 | chr16_12698704_- | intronic |
| ADediting_517496 | chr16_12700502_- | intronic |
| ADediting_517497 | chr16_12700506_- | intronic |
| ADediting_517498 | chr16_12700551_- | intronic |
| ADediting_517499 | chr16_12700554_- | intronic |
| ADediting_517500 | chr16_12700555_- | intronic |
| ADediting_517501 | chr16_12700643_- | intronic |
| ADediting_517502 | chr16_12700678_- | intronic |
| ADediting_517503 | chr16_12700687_- | intronic |
| ADediting_517504 | chr16_12701295_- | intronic |
| ADediting_517505 | chr16_12701354_- | intronic |
| ADediting_517506 | chr16_12701368_- | intronic |
| ADediting_517507 | chr16_12701421_- | intronic |
| ADediting_517508 | chr16_12701457_- | intronic |
| ADediting_517509 | chr16_12701515_- | intronic |
| ADediting_517510 | chr16_12702753_- | intronic |
| ADediting_517511 | chr16_12702768_- | intronic |
| ADediting_517512 | chr16_12702781_- | intronic |
| ADediting_517513 | chr16_12702926_- | intronic |
| ADediting_517514 | chr16_12726454_- | intronic |
| ADediting_517516 | chr16_12733554_- | intronic |
| ADediting_517517 | chr16_12734329_- | intronic |
| ADediting_517518 | chr16_12737002_- | intronic |
| ADediting_517519 | chr16_12737133_- | intronic |
| ADediting_517520 | chr16_12737138_- | intronic |
| ADediting_517521 | chr16_12737151_- | intronic |
| ADediting_517523 | chr16_12741990_- | intronic |
| ADediting_517526 | chr16_12764264_- | intronic |
| ADediting_517527 | chr16_12764292_- | intronic |
| ADediting_517528 | chr16_12764426_- | intronic |
| ADediting_517529 | chr16_12764445_- | intronic |
| ADediting_517530 | chr16_12767702_- | intronic |
| ADediting_517531 | chr16_12767835_- | intronic |
| ADediting_517532 | chr16_12767848_- | intronic |
| ADediting_517533 | chr16_12769137_- | intronic |
| ADediting_517534 | chr16_12770783_- | intronic |
| ADediting_517535 | chr16_12776807_- | intronic |
| ADediting_517536 | chr16_12776819_- | intronic |
| ADediting_517537 | chr16_12776836_- | intronic |
| ADediting_517538 | chr16_12776837_- | intronic |
| ADediting_517539 | chr16_12778021_- | intronic |
| ADediting_517540 | chr16_12778137_- | intronic |
| ADediting_517541 | chr16_12778189_- | intronic |
| ADediting_517542 | chr16_12778368_- | intronic |
| ADediting_517543 | chr16_12779474_- | intronic |
| ADediting_517544 | chr16_12780252_- | intronic |
| ADediting_517546 | chr16_12786874_- | intronic |
| ADediting_1541005 | chr16_12661063_- | UTR3 |
| ADediting_1623900 | chr16_12686324_- | intronic |
| ADediting_1623901 | chr16_12700568_- | intronic |
| ADediting_1623902 | chr16_12773639_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_517430 | chr16_12660856_- | SINE | Alu | Name=AluJr |
| ADediting_517431 | chr16_12660868_- | SINE | Alu | Name=AluJr |
| ADediting_517432 | chr16_12660895_- | SINE | Alu | Name=AluJr |
| ADediting_517433 | chr16_12660921_- | SINE | Alu | Name=AluJr |
| ADediting_517434 | chr16_12660925_- | SINE | Alu | Name=AluJr |
| ADediting_517435 | chr16_12661028_- | SINE | Alu | Name=AluJr |
| ADediting_517436 | chr16_12661058_- | SINE | Alu | Name=AluJr |
| ADediting_517437 | chr16_12661093_- | SINE | Alu | Name=AluJr |
| ADediting_517438 | chr16_12661096_- | SINE | Alu | Name=AluJr |
| ADediting_517439 | chr16_12661106_- | SINE | Alu | Name=AluJr |
| ADediting_517440 | chr16_12661109_- | SINE | Alu | Name=AluJr |
| ADediting_517441 | chr16_12663129_- | SINE | Alu | Name=AluSx |
| ADediting_517442 | chr16_12663134_- | SINE | Alu | Name=AluSx |
| ADediting_517443 | chr16_12663172_- | SINE | Alu | Name=AluSx |
| ADediting_517444 | chr16_12663198_- | SINE | Alu | Name=AluSx |
| ADediting_517445 | chr16_12663199_- | SINE | Alu | Name=AluSx |
| ADediting_517446 | chr16_12663254_- | SINE | Alu | Name=AluSx |
| ADediting_517447 | chr16_12663333_- | SINE | Alu | Name=AluSx |
| ADediting_517448 | chr16_12663334_- | SINE | Alu | Name=AluSx |
| ADediting_517449 | chr16_12663342_- | SINE | Alu | Name=AluSx |
| ADediting_517450 | chr16_12663356_- | SINE | Alu | Name=AluSx |
| ADediting_517451 | chr16_12685284_- | SINE | Alu | Name=AluSx1 |
| ADediting_517452 | chr16_12687623_- | SINE | Alu | Name=AluSz |
| ADediting_517453 | chr16_12687627_- | SINE | Alu | Name=AluSz |
| ADediting_517454 | chr16_12688163_- | SINE | Alu | Name=AluJb |
| ADediting_517455 | chr16_12688408_- | SINE | Alu | Name=AluSx1 |
| ADediting_517456 | chr16_12688512_- | SINE | Alu | Name=AluSx1 |
| ADediting_517457 | chr16_12688534_- | SINE | Alu | Name=AluSx1 |
| ADediting_517458 | chr16_12688570_- | SINE | Alu | Name=AluSx1 |
| ADediting_517459 | chr16_12689302_- | SINE | Alu | Name=AluJr |
| ADediting_517460 | chr16_12691361_- | SINE | Alu | Name=AluSz |
| ADediting_517461 | chr16_12693404_- | SINE | Alu | Name=AluJb |
| ADediting_517462 | chr16_12693455_- | SINE | Alu | Name=AluJb |
| ADediting_517463 | chr16_12693989_- | SINE | Alu | Name=AluSx1 |
| ADediting_517464 | chr16_12696538_- | SINE | Alu | Name=AluSx1 |
| ADediting_517465 | chr16_12696539_- | SINE | Alu | Name=AluSx1 |
| ADediting_517466 | chr16_12696544_- | SINE | Alu | Name=AluSx1 |
| ADediting_517467 | chr16_12696579_- | SINE | Alu | Name=AluSx1 |
| ADediting_517468 | chr16_12696722_- | SINE | Alu | Name=AluSx1 |
| ADediting_517469 | chr16_12697103_- | SINE | Alu | Name=AluSx |
| ADediting_517470 | chr16_12697163_- | SINE | Alu | Name=AluSx |
| ADediting_517471 | chr16_12697855_- | SINE | Alu | Name=AluSz |
| ADediting_517472 | chr16_12697867_- | SINE | Alu | Name=AluSz |
| ADediting_517473 | chr16_12697894_- | SINE | Alu | Name=AluSz |
| ADediting_517474 | chr16_12697938_- | SINE | Alu | Name=AluSz |
| ADediting_517475 | chr16_12697944_- | SINE | Alu | Name=AluSz |
| ADediting_517476 | chr16_12697947_- | SINE | Alu | Name=AluSz |
| ADediting_517477 | chr16_12697982_- | SINE | Alu | Name=AluSz |
| ADediting_517478 | chr16_12697988_- | SINE | Alu | Name=AluSz |
| ADediting_517479 | chr16_12698001_- | SINE | Alu | Name=AluSz |
| ADediting_517480 | chr16_12698002_- | SINE | Alu | Name=AluSz |
| ADediting_517481 | chr16_12698010_- | SINE | Alu | Name=AluSz |
| ADediting_517482 | chr16_12698023_- | SINE | Alu | Name=AluSz |
| ADediting_517483 | chr16_12698024_- | SINE | Alu | Name=AluSz |
| ADediting_517484 | chr16_12698034_- | SINE | Alu | Name=AluSz |
| ADediting_517485 | chr16_12698096_- | SINE | Alu | Name=AluSz |
| ADediting_517486 | chr16_12698499_- | SINE | Alu | Name=AluSx1 |
| ADediting_517487 | chr16_12698540_- | SINE | Alu | Name=AluSx1 |
| ADediting_517488 | chr16_12698580_- | SINE | Alu | Name=AluSx1 |
| ADediting_517489 | chr16_12698649_- | SINE | Alu | Name=AluSx1 |
| ADediting_517490 | chr16_12698650_- | SINE | Alu | Name=AluSx1 |
| ADediting_517491 | chr16_12698654_- | SINE | Alu | Name=AluSx1 |
| ADediting_517492 | chr16_12698662_- | SINE | Alu | Name=AluSx1 |
| ADediting_517493 | chr16_12698668_- | SINE | Alu | Name=AluSx1 |
| ADediting_517494 | chr16_12698703_- | SINE | Alu | Name=AluSx1 |
| ADediting_517495 | chr16_12698704_- | SINE | Alu | Name=AluSx1 |
| ADediting_517496 | chr16_12700502_- | SINE | Alu | Name=AluSx |
| ADediting_517497 | chr16_12700506_- | SINE | Alu | Name=AluSx |
| ADediting_517498 | chr16_12700551_- | SINE | Alu | Name=AluSx |
| ADediting_517499 | chr16_12700554_- | SINE | Alu | Name=AluSx |
| ADediting_517500 | chr16_12700555_- | SINE | Alu | Name=AluSx |
| ADediting_517501 | chr16_12700643_- | SINE | Alu | Name=AluSx |
| ADediting_517502 | chr16_12700678_- | SINE | Alu | Name=AluSx |
| ADediting_517503 | chr16_12700687_- | SINE | Alu | Name=AluSx |
| ADediting_517504 | chr16_12701295_- | SINE | Alu | Name=AluSz |
| ADediting_517505 | chr16_12701354_- | SINE | Alu | Name=AluSz |
| ADediting_517506 | chr16_12701368_- | SINE | Alu | Name=AluSz |
| ADediting_517507 | chr16_12701421_- | SINE | Alu | Name=AluSz |
| ADediting_517508 | chr16_12701457_- | SINE | Alu | Name=AluSz |
| ADediting_517509 | chr16_12701515_- | SINE | Alu | Name=AluSz |
| ADediting_517510 | chr16_12702753_- | SINE | Alu | Name=AluSq2 |
| ADediting_517511 | chr16_12702768_- | SINE | Alu | Name=AluSq2 |
| ADediting_517512 | chr16_12702781_- | SINE | Alu | Name=AluSq2 |
| ADediting_517513 | chr16_12702926_- | SINE | Alu | Name=AluSq2 |
| ADediting_517514 | chr16_12726454_- | SINE | Alu | Name=AluSz |
| ADediting_517516 | chr16_12733554_- | SINE | Alu | Name=AluSx1 |
| ADediting_517517 | chr16_12734329_- | SINE | Alu | Name=AluSz6 |
| ADediting_517518 | chr16_12737002_- | SINE | Alu | Name=AluSz |
| ADediting_517519 | chr16_12737133_- | SINE | Alu | Name=AluSz |
| ADediting_517520 | chr16_12737138_- | SINE | Alu | Name=AluSz |
| ADediting_517521 | chr16_12737151_- | SINE | Alu | Name=AluSz |
| ADediting_517523 | chr16_12741990_- | SINE | Alu | Name=AluSz |
| ADediting_517526 | chr16_12764264_- | SINE | Alu | Name=AluSz |
| ADediting_517527 | chr16_12764292_- | SINE | Alu | Name=AluSz |
| ADediting_517528 | chr16_12764426_- | SINE | Alu | Name=AluSz |
| ADediting_517529 | chr16_12764445_- | SINE | Alu | Name=AluSz |
| ADediting_517530 | chr16_12767702_- | SINE | Alu | Name=AluSx1 |
| ADediting_517531 | chr16_12767835_- | SINE | Alu | Name=AluSx1 |
| ADediting_517532 | chr16_12767848_- | SINE | Alu | Name=AluSx1 |
| ADediting_517533 | chr16_12769137_- | SINE | Alu | Name=AluSq |
| ADediting_517534 | chr16_12770783_- | SINE | Alu | Name=AluSx |
| ADediting_517535 | chr16_12776807_- | SINE | Alu | Name=AluSg |
| ADediting_517536 | chr16_12776819_- | SINE | Alu | Name=AluSg |
| ADediting_517537 | chr16_12776836_- | SINE | Alu | Name=AluSg |
| ADediting_517538 | chr16_12776837_- | SINE | Alu | Name=AluSg |
| ADediting_517539 | chr16_12778021_- | SINE | Alu | Name=AluSz |
| ADediting_517540 | chr16_12778137_- | SINE | Alu | Name=AluSz |
| ADediting_517541 | chr16_12778189_- | SINE | Alu | Name=AluSz |
| ADediting_517542 | chr16_12778368_- | SINE | Alu | Name=AluSx |
| ADediting_517543 | chr16_12779474_- | SINE | Alu | Name=AluSx1 |
| ADediting_517544 | chr16_12780252_- | SINE | Alu | Name=AluSz |
| ADediting_517546 | chr16_12786874_- | SINE | Alu | Name=AluSc |
| ADediting_1541005 | chr16_12661063_- | SINE | Alu | Name=AluJr |
| ADediting_1623900 | chr16_12686324_- | SINE | Alu | Name=FLAM_A |
| ADediting_1623901 | chr16_12700568_- | SINE | Alu | Name=AluSx |
| ADediting_1623902 | chr16_12773639_- | SINE | Alu | Name=AluSz6 |
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RNA A-to-I editing events in the alternative splicing sites for CPPED1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CPPED1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for CPPED1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for CPPED1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_517431 | chr16_12660868_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-3189-3p | chr16 | 12660867 | 12660873 | 7mer-m8 | 12660866 | 12660885 | 145 | -19.31 |
| ADediting_517431 | chr16_12660868_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6813-3p | chr16 | 12660866 | 12660872 | 7mer-m8 | 12660865 | 12660885 | 140 | -16.1 |
| ADediting_517432 | chr16_12660895_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-661 | chr16 | 12660892 | 12660899 | 8mer-1a | 12660892 | 12660914 | 147 | -21.72 |
| ADediting_517432 | chr16_12660895_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6852-5p | chr16 | 12660894 | 12660900 | 7mer-m8 | 12660893 | 12660913 | 155 | -22.95 |
| ADediting_517433 | chr16_12660921_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-3940-3p | chr16 | 12660917 | 12660923 | 7mer-m8 | 12660916 | 12660937 | 155 | -22.47 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-196a-3p | chr16 | 12660923 | 12660929 | 7mer-m8 | 12660922 | 12660943 | 152 | -14.73 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-3187-5p | chr16 | 12660920 | 12660926 | 7mer-m8 | 12660919 | 12660941 | 147 | -26.19 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-5189-5p | chr16 | 12660920 | 12660926 | 7mer-m8 | 12660919 | 12660941 | 152 | -26.84 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-612 | chr16 | 12660920 | 12660926 | 7mer-m8 | 12660919 | 12660944 | 146 | -23.93 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6860 | chr16 | 12660920 | 12660926 | 7mer-m8 | 12660919 | 12660939 | 142 | -18.08 |
| ADediting_517437 | chr16_12661093_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4486 | chr16 | 12661088 | 12661094 | 7mer-m8 | 12661087 | 12661103 | 145 | -19.72 |
| ADediting_517438 | chr16_12661096_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-542-3p | chr16 | 12661092 | 12661098 | 7mer-m8 | 12661091 | 12661113 | 154 | -16.68 |
| ADediting_517438 | chr16_12661096_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6501-3p | chr16 | 12661096 | 12661102 | 7mer-m8 | 12661095 | 12661117 | 149 | -14.63 |
| ADediting_517439 | chr16_12661106_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-3664-5p | chr16 | 12661105 | 12661111 | 7mer-m8 | 12661104 | 12661125 | 150 | -14.83 |
| ADediting_517439 | chr16_12661106_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4432 | chr16 | 12661102 | 12661108 | 7mer-m8 | 12661101 | 12661121 | 154 | -14.43 |
| ADediting_517439 | chr16_12661106_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4522 | chr16 | 12661104 | 12661110 | 7mer-m8 | 12661103 | 12661123 | 152 | -17.99 |
| ADediting_517441 | chr16_12663129_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-149-5p | chr16 | 12663129 | 12663135 | 7mer-m8 | 12663128 | 12663150 | 152 | -22.11 |
| ADediting_517442 | chr16_12663134_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-324-3p | chr16 | 12663134 | 12663140 | 7mer-m8 | 12663133 | 12663155 | 149 | -24.91 |
| ADediting_517444 | chr16_12663198_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-8052 | chr16 | 12663193 | 12663199 | 7mer-1a | 12663193 | 12663215 | 143 | -27.33 |
| ADediting_517445 | chr16_12663199_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-513a-5p | chr16 | 12663198 | 12663204 | 7mer-m8 | 12663197 | 12663214 | 144 | -17.54 |
| ADediting_517445 | chr16_12663199_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-638 | chr16 | 12663193 | 12663199 | 7mer-1a | 12663193 | 12663217 | 159 | -29.42 |
| ADediting_517446 | chr16_12663254_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-412-3p | chr16 | 12663254 | 12663260 | 7mer-m8 | 12663253 | 12663275 | 153 | -17.3 |
| ADediting_517446 | chr16_12663254_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6754-3p | chr16 | 12663254 | 12663260 | 7mer-m8 | 12663253 | 12663273 | 144 | -15.76 |
| ADediting_517446 | chr16_12663254_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6874-5p | chr16 | 12663249 | 12663255 | 7mer-m8 | 12663248 | 12663269 | 145 | -24.45 |
| ADediting_517447 | chr16_12663333_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-3199 | chr16 | 12663328 | 12663334 | 7mer-1a | 12663328 | 12663347 | 141 | -19.46 |
| ADediting_517448 | chr16_12663334_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-513a-5p | chr16 | 12663333 | 12663339 | 7mer-m8 | 12663332 | 12663349 | 140 | -16.34 |
| ADediting_517448 | chr16_12663334_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-638 | chr16 | 12663328 | 12663334 | 7mer-1a | 12663328 | 12663352 | 153 | -33.59 |
| ADediting_517450 | chr16_12663356_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6075 | chr16 | 12663356 | 12663362 | 7mer-m8 | 12663355 | 12663376 | 145 | -21.42 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1541005 | chr16_12661063_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4679 | chr16 | 12661062 | 12661068 | 7mer-m8 | 12661061 | 12661082 | 141 | -14.4 |
| ADediting_517433 | chr16_12660921_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-661 | chr16 | 12660918 | 12660924 | 7mer-m8 | 12660917 | 12660940 | 150 | -21.32 |
| ADediting_517433 | chr16_12660921_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6742-3p | chr16 | 12660919 | 12660925 | 7mer-m8 | 12660918 | 12660937 | 140 | -13.8 |
| ADediting_517433 | chr16_12660921_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6861-5p | chr16 | 12660920 | 12660926 | 7mer-m8 | 12660919 | 12660939 | 150 | -21.22 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-194-5p | chr16 | 12660924 | 12660930 | 7mer-m8 | 12660923 | 12660946 | 148 | -11.87 |
| ADediting_517434 | chr16_12660925_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6861-5p | chr16 | 12660920 | 12660926 | 7mer-m8 | 12660919 | 12660939 | 150 | -21.22 |
| ADediting_517437 | chr16_12661093_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-1262 | chr16 | 12661089 | 12661095 | 7mer-m8 | 12661088 | 12661106 | 144 | -14.9 |
| ADediting_517437 | chr16_12661093_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6736-5p | chr16 | 12661089 | 12661095 | 7mer-m8 | 12661088 | 12661114 | 152 | -26.76 |
| ADediting_517437 | chr16_12661093_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6776-5p | chr16 | 12661088 | 12661094 | 7mer-m8 | 12661087 | 12661103 | 145 | -20.83 |
| ADediting_517439 | chr16_12661106_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4743-3p | chr16 | 12661106 | 12661112 | 7mer-m8 | 12661105 | 12661125 | 145 | -12.85 |
| ADediting_517439 | chr16_12661106_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4778-5p | chr16 | 12661105 | 12661111 | 7mer-m8 | 12661104 | 12661126 | 155 | -17.15 |
| ADediting_517440 | chr16_12661109_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4743-3p | chr16 | 12661106 | 12661112 | 7mer-m8 | 12661105 | 12661125 | 145 | -12.85 |
| ADediting_517440 | chr16_12661109_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4778-5p | chr16 | 12661105 | 12661111 | 7mer-m8 | 12661104 | 12661126 | 155 | -17.15 |
| ADediting_517440 | chr16_12661109_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6888-3p | chr16 | 12661106 | 12661113 | 8mer-1a | 12661106 | 12661126 | 143 | -8.93 |
| ADediting_517442 | chr16_12663134_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4284 | chr16 | 12663130 | 12663137 | 8mer-1a | 12663130 | 12663147 | 151 | -16.7 |
| ADediting_517443 | chr16_12663172_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-1976 | chr16 | 12663167 | 12663174 | 8mer-1a | 12663167 | 12663187 | 149 | -24.39 |
| ADediting_517443 | chr16_12663172_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6747-3p | chr16 | 12663169 | 12663176 | 8mer-1a | 12663169 | 12663191 | 149 | -23.68 |
| ADediting_517444 | chr16_12663198_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-5089-5p | chr16 | 12663193 | 12663199 | 7mer-m8 | 12663192 | 12663215 | 150 | -16.96 |
| ADediting_517444 | chr16_12663198_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6504-3p | chr16 | 12663197 | 12663203 | 7mer-m8 | 12663196 | 12663215 | 140 | -9.92 |
| ADediting_517445 | chr16_12663199_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6504-3p | chr16 | 12663197 | 12663203 | 7mer-m8 | 12663196 | 12663215 | 140 | -9.92 |
| ADediting_517447 | chr16_12663333_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-10399-5p | chr16 | 12663332 | 12663338 | 7mer-m8 | 12663331 | 12663351 | 140 | -9.03 |
| ADediting_517447 | chr16_12663333_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-5089-5p | chr16 | 12663328 | 12663334 | 7mer-m8 | 12663327 | 12663348 | 148 | -14.13 |
| ADediting_517447 | chr16_12663333_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6504-3p | chr16 | 12663332 | 12663338 | 7mer-m8 | 12663331 | 12663352 | 152 | -15.11 |
| ADediting_517448 | chr16_12663334_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-10399-5p | chr16 | 12663332 | 12663338 | 7mer-m8 | 12663331 | 12663351 | 140 | -9.03 |
| ADediting_517448 | chr16_12663334_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-6504-3p | chr16 | 12663332 | 12663338 | 7mer-m8 | 12663331 | 12663352 | 152 | -15.11 |
| ADediting_517448 | chr16_12663334_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-7151-3p | chr16 | 12663333 | 12663340 | 8mer-1a | 12663333 | 12663352 | 145 | -14.14 |
| ADediting_517450 | chr16_12663356_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-1271-3p | chr16 | 12663350 | 12663357 | 8mer-1a | 12663350 | 12663374 | 150 | -19.4 |
| ADediting_517450 | chr16_12663356_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-550a-3-5p | chr16 | 12663350 | 12663357 | 8mer-1a | 12663350 | 12663369 | 140 | -12.5 |
| ADediting_517450 | chr16_12663356_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-550a-5p | chr16 | 12663350 | 12663357 | 8mer-1a | 12663350 | 12663372 | 140 | -19.31 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-589-3p | chr16 | 12660928 | 12660934 | 7mer-m8 | 12660927 | 12660953 | 152 | -24.24 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-589-3p | chr16 | 12662922 | 12662929 | 8mer-1a | 12662922 | 12662945 | 140 | -16.41 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000103381.12 | ENST00000261660.4 | CPPED1-201 | hsa-miR-641 | chr16 | 12664760 | 12664766 | 7mer-m8 | 12664759 | 12664781 | 152 | -18.49 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-641 | chr16 | 12664760 | 12664766 | 7mer-m8 | 12664759 | 12664781 | 152 | -18.49 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000103381.12 | ENST00000433677.6 | CPPED1-203 | hsa-miR-641 | chr16 | 12664760 | 12664766 | 7mer-m8 | 12664759 | 12664781 | 152 | -18.49 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-1273h-3p | chr16 | 12661702 | 12661708 | 7mer-m8 | 12661701 | 12661722 | 140 | -18.85 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000103381.12 | ENST00000261660.4 | CPPED1-201 | hsa-miR-5581-3p | chr16 | 12664634 | 12664640 | 7mer-m8 | 12664633 | 12664654 | 140 | -13.26 |
| ADediting_107020 | chr1_37500952_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-5581-3p | chr16 | 12664634 | 12664640 | 7mer-m8 | 12664633 | 12664654 | 140 | -13.26 |
| ADediting_107020 | chr1_37500952_- | ENSG00000103381.12 | ENST00000433677.6 | CPPED1-203 | hsa-miR-5581-3p | chr16 | 12664634 | 12664640 | 7mer-m8 | 12664633 | 12664654 | 140 | -13.26 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000103381.12 | ENST00000261660.4 | CPPED1-201 | hsa-miR-589-3p | chr16 | 12663794 | 12663800 | 7mer-m8 | 12663793 | 12663815 | 155 | -14.81 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-589-3p | chr16 | 12663794 | 12663800 | 7mer-m8 | 12663793 | 12663815 | 155 | -14.81 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000103381.12 | ENST00000433677.6 | CPPED1-203 | hsa-miR-589-3p | chr16 | 12663794 | 12663800 | 7mer-m8 | 12663793 | 12663815 | 155 | -14.81 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000103381.12 | ENST00000261660.4 | CPPED1-201 | hsa-miR-4477b | chr16 | 12664491 | 12664498 | 8mer-1a | 12664491 | 12664514 | 147 | -10.94 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4477b | chr16 | 12664491 | 12664498 | 8mer-1a | 12664491 | 12664514 | 147 | -10.94 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000103381.12 | ENST00000433677.6 | CPPED1-203 | hsa-miR-4477b | chr16 | 12664491 | 12664498 | 8mer-1a | 12664491 | 12664514 | 147 | -10.94 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000103381.12 | ENST00000261660.4 | CPPED1-201 | hsa-miR-4477b | chr16 | 12664491 | 12664498 | 8mer-1a | 12664491 | 12664514 | 147 | -10.94 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4477b | chr16 | 12664491 | 12664498 | 8mer-1a | 12664491 | 12664514 | 147 | -10.94 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000103381.12 | ENST00000433677.6 | CPPED1-203 | hsa-miR-4477b | chr16 | 12664491 | 12664498 | 8mer-1a | 12664491 | 12664514 | 147 | -10.94 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-337-3p | chr16 | 12663413 | 12663419 | 7mer-m8 | 12663412 | 12663435 | 154 | -18.19 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-641 | chr16 | 12662700 | 12662706 | 7mer-m8 | 12662699 | 12662721 | 149 | -13.57 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-556-3p | chr16 | 12660602 | 12660608 | 7mer-m8 | 12660601 | 12660623 | 143 | -6.79 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-641 | chr16 | 12662700 | 12662706 | 7mer-m8 | 12662699 | 12662721 | 149 | -13.57 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-1273h-3p | chr16 | 12661718 | 12661724 | 7mer-m8 | 12661717 | 12661738 | 141 | -20.98 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000103381.12 | ENST00000261660.4 | CPPED1-201 | hsa-miR-4775 | chr16 | 12663503 | 12663510 | 8mer-1a | 12663503 | 12663525 | 151 | -10.52 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-4775 | chr16 | 12663503 | 12663510 | 8mer-1a | 12663503 | 12663525 | 151 | -10.52 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000103381.12 | ENST00000433677.6 | CPPED1-203 | hsa-miR-4775 | chr16 | 12663503 | 12663510 | 8mer-1a | 12663503 | 12663525 | 151 | -10.52 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-5585-3p | chr16 | 12662728 | 12662734 | 7mer-m8 | 12662727 | 12662748 | 140 | -12.99 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000103381.12 | ENST00000381774.9 | CPPED1-202 | hsa-miR-5585-3p | chr16 | 12662728 | 12662734 | 7mer-m8 | 12662727 | 12662748 | 140 | -12.99 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for CPPED1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000381774.9 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_517430 | ENST00000381774.9 | chr16_12660856_- | 5086 | -1918.50 | -1918.50 | -1965.80 |
| ADediting_517431 | ENST00000381774.9 | chr16_12660868_- | 5074 | -1918.20 | -1918.50 | -1965.80 |
| ADediting_517432 | ENST00000381774.9 | chr16_12660895_- | 5047 | -1925.10 | -1918.50 | -1965.80 |
| ADediting_517433 | ENST00000381774.9 | chr16_12660921_- | 5021 | -1917.80 | -1918.50 | -1965.80 |
| ADediting_517434 | ENST00000381774.9 | chr16_12660925_- | 5017 | -1922.00 | -1918.50 | -1965.80 |
| ADediting_517435 | ENST00000381774.9 | chr16_12661028_- | 4914 | -1924.70 | -1918.50 | -1965.80 |
| ADediting_517436 | ENST00000381774.9 | chr16_12661058_- | 4884 | -1918.10 | -1918.50 | -1965.80 |
| ADediting_1541005 | ENST00000381774.9 | chr16_12661063_- | 4879 | -1922.20 | -1918.50 | -1965.80 |
| ADediting_517437 | ENST00000381774.9 | chr16_12661093_- | 4849 | -1922.20 | -1918.50 | -1965.80 |
| ADediting_517438 | ENST00000381774.9 | chr16_12661096_- | 4846 | -1924.40 | -1918.50 | -1965.80 |
| ADediting_517439 | ENST00000381774.9 | chr16_12661106_- | 4836 | -1924.70 | -1918.50 | -1965.80 |
| ADediting_517440 | ENST00000381774.9 | chr16_12661109_- | 4833 | -1917.80 | -1918.50 | -1965.80 |
| ADediting_517441 | ENST00000381774.9 | chr16_12663129_- | 2813 | -1919.30 | -1918.50 | -1965.80 |
| ADediting_517442 | ENST00000381774.9 | chr16_12663134_- | 2808 | -1917.60 | -1918.50 | -1965.80 |
| ADediting_517443 | ENST00000381774.9 | chr16_12663172_- | 2770 | -1923.20 | -1918.50 | -1965.80 |
| ADediting_517444 | ENST00000381774.9 | chr16_12663198_- | 2744 | -1924.70 | -1918.50 | -1965.80 |
| ADediting_517445 | ENST00000381774.9 | chr16_12663199_- | 2743 | -1918.20 | -1918.50 | -1965.80 |
| ADediting_517446 | ENST00000381774.9 | chr16_12663254_- | 2688 | -1918.80 | -1918.50 | -1965.80 |
| ADediting_517447 | ENST00000381774.9 | chr16_12663333_- | 2609 | -1918.50 | -1918.50 | -1965.80 |
| ADediting_517448 | ENST00000381774.9 | chr16_12663334_- | 2608 | -1918.60 | -1918.50 | -1965.80 |
| ADediting_517449 | ENST00000381774.9 | chr16_12663342_- | 2600 | -1918.80 | -1918.50 | -1965.80 |
| ADediting_517450 | ENST00000381774.9 | chr16_12663356_- | 2586 | -1922.30 | -1918.50 | -1965.80 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CPPED1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_517434 | chr16_12660925_- | 0.717972681617085 | 0.0297315698298176 | 0.0651734370211055 | -0.150966165425008 | 1.9912765383846e-06 | 0.376925597769412 |
| DLPFC | ADediting_517438 | chr16_12661096_- | 0.314628572022264 | 0.0572963502298828 | 0.460202371791523 | -0.042096218648534 | 3.4992985988355e-08 | 0.306849836591163 |
| TCX | ADediting_517438 | chr16_12661096_- | 0.913075530936942 | -0.00898789043482275 | 0.00283647858916609 | -0.242106920096554 | 3.40662788136642e-06 | 0.368859486601552 |
| DLPFC | ADediting_517439 | chr16_12661106_- | 0.00575727758797939 | 0.156495735524546 | 0.964331317647815 | -0.0025501644153537 | 2.22294780018976e-11 | 0.368063663612326 |
| TCX | ADediting_517439 | chr16_12661106_- | 0.39970626150146 | 0.0692576868988928 | 0.00930681610921994 | -0.211694681589438 | 2.32548865257516e-07 | 0.407192855172682 |
| DLPFC | ADediting_517466 | chr16_12696544_- | 0.59389024397723 | -0.0303999347910484 | 0.0310393855435047 | -0.122517944223159 | 8.99569551366705e-11 | 0.357416248469183 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.4091619981951e-58 | 0.754773506578841 | 2.82875418040683e-47 | 0.701757754879359 | 0.00245290994719532 | 0.171457678500294 |
| AC | 1.14266628904862e-76 | 0.866166679371738 | 9.54540610513408e-51 | 0.772141047143064 | 3.3795933479532e-20 | 0.538469114236846 |
| PCC | 3.97530666093451e-25 | 0.658612607963917 | 8.15983193406323e-26 | 0.665671108186655 | 0.000308528741884256 | 0.258318638081894 |
| CER | 1.03090466429188e-09 | 0.472486398410809 | 0.000921972513416398 | 0.267812168340711 | 1.92653748550495e-09 | 0.465616473413859 |
| TCX | 1.70892929858607e-10 | 0.491425081643617 | 0.582316289955793 | -0.045263301050422 | 8.99155654367601e-22 | 0.680979675565497 |
| FP | 1.64345493574662e-16 | 0.566709300388048 | 7.59986143630435e-22 | 0.639388792625361 | 1.93697460589571e-06 | 0.348005103375427 |
| IFG | 0.0465842783406403 | 0.401634581583817 | 0.796374945962227 | 0.0543528431633095 | 0.0660844393299355 | 0.373265872924015 |
| PG | 5.55599752312365e-32 | 0.7279546727808 | 1.67840756509537e-17 | 0.571248097144936 | 0.0065780162298458 | 0.198605656011715 |
| STG | 1.00352264829953e-14 | 0.721302861312186 | 1.27136659721976e-07 | 0.538443231946481 | 0.000599241237572353 | 0.36681099705686 |
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Relation with AD stages for CPPED1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_517444 | chr16_12663198_- | 0.04897706951583 | -0.397704204776515 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 1.75445677064093e-05 | 0.403947019423148 |
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RelatedDrugs for CPPED1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CPPED1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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