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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for OCIAD1 |
Gene summary |
| Gene information | Gene symbol | OCIAD1 | Gene ID | 54940 |
| Gene name | OCIA domain containing 1 | |
| Synonyms | ASRIJ|OCIA|TPA018 | |
| Cytomap | 4p11 | |
| Type of gene | protein-coding | |
| Description | OCIA domain-containing protein 1ovarian cancer immunoreactive antigen domain containing 1ovarian cancer immunoreactive antigen domain containing 1Aovarian carcinoma immunoreactive antigen | |
| Modification date | 20200313 | |
| UniProtAcc | Q9NX40, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for OCIAD1 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_1138711(48832995, +), ADediting_1138712(48833130, +), ADediting_1138713(48833131, +), ADediting_1138714(48833147, +), ADediting_1138715(48833217, +), ADediting_1138716(48834225, +), ADediting_1138717(48834228, +), ADediting_1138718(48834271, +), ADediting_1138719(48834272, +), ADediting_1138720(48834289, +), ADediting_1138721(48834301, +), ADediting_1138722(48834311, +), ADediting_1138723(48834336, +), ADediting_1138724(48834337, +), ADediting_1138725(48834352, +), ADediting_1138726(48834355, +), ADediting_1138727(48834358, +), ADediting_1138728(48834372, +), ADediting_1138729(48834381, +), ADediting_1138730(48834394, +), ADediting_1138731(48834430, +), ADediting_1138732(48834442, +), ADediting_1138733(48834444, +), ADediting_1138734(48834458, +), ADediting_1138735(48834512, +), ADediting_1138736(48834514, +), ADediting_1138737(48834515, +), ADediting_1138738(48834560, +), ADediting_1138739(48834563, +), ADediting_1138740(48834568, +), ADediting_1138741(48834569, +), ADediting_1138742(48834586, +), ADediting_1138743(48834588, +), ADediting_1138744(48834605, +), ADediting_1138745(48834608, +), ADediting_1138746(48834609, +), ADediting_1138747(48834610, +), ADediting_1138748(48834611, +), ADediting_1138749(48834621, +), ADediting_1138750(48834624, +), ADediting_1138751(48834644, +), ADediting_1138752(48834650, +), ADediting_1138753(48834651, +), ADediting_1138754(48834657, +), ADediting_1138755(48834729, +), ADediting_1138756(48834965, +), ADediting_1138757(48835034, +), ADediting_1138758(48835073, +), ADediting_1138759(48835099, +), ADediting_1138760(48835114, +), ADediting_1138761(48835117, +), ADediting_1138762(48835143, +), ADediting_1138763(48835168, +), ADediting_1138764(48835196, +), ADediting_1138765(48835635, +), ADediting_1138766(48835649, +), ADediting_1138767(48835650, +), ADediting_1138768(48835669, +), ADediting_1138769(48835670, +), ADediting_1138770(48835697, +), ADediting_1138771(48835712, +), ADediting_1138772(48835805, +), ADediting_1138773(48837008, +), ADediting_1138774(48837025, +), ADediting_1138775(48837101, +), ADediting_1138776(48837111, +), ADediting_1138777(48837129, +), ADediting_1138778(48837216, +), ADediting_1138779(48837235, +), ADediting_1138780(48837323, +), ADediting_1138781(48837349, +), ADediting_1138782(48837393, +), ADediting_1138783(48837481, +), ADediting_1138784(48837552, +), ADediting_1138785(48837553, +), ADediting_1138786(48838062, +), ADediting_1138787(48838063, +), ADediting_1138788(48838089, +), ADediting_1138789(48838093, +), ADediting_1138790(48838098, +), ADediting_1138791(48838103, +), ADediting_1138792(48838128, +), ADediting_1138793(48838153, +), ADediting_1138794(48838156, +), ADediting_1138795(48838157, +), ADediting_1138796(48838162, +), ADediting_1138797(48838165, +), ADediting_1138798(48838167, +), ADediting_1138799(48838168, +), ADediting_1138800(48838171, +), ADediting_1138801(48838176, +), ADediting_1138802(48838187, +), ADediting_1138803(48838197, +), ADediting_1138804(48838198, +), ADediting_1138805(48838203, +), ADediting_1138806(48838207, +), ADediting_1138807(48838250, +), ADediting_1138808(48838262, +), ADediting_1138809(48838263, +), ADediting_1138810(48838267, +), ADediting_1138811(48838268, +), ADediting_1138812(48839174, +), ADediting_1138813(48839227, +), ADediting_1138814(48839234, +), ADediting_1138815(48839289, +), ADediting_1138816(48839293, +), ADediting_1138817(48839315, +), ADediting_1138818(48839419, +), ADediting_1138819(48840896, +), ADediting_1138820(48850312, +), ADediting_1138821(48850315, +), ADediting_1138822(48850328, +), ADediting_1138823(48850376, +), ADediting_1138824(48850393, +), ADediting_1138825(48850446, +), ADediting_1138826(48850491, +), ADediting_1138827(48850604, +), ADediting_1138828(48850627, +), ADediting_1138829(48850703, +), ADediting_1138830(48850758, +), ADediting_1138831(48850781, +), ADediting_1138832(48850784, +), ADediting_1138833(48850796, +), ADediting_1138834(48850797, +), ADediting_1138835(48850837, +), ADediting_1138836(48850849, +), ADediting_1138837(48850851, +), ADediting_1138838(48851429, +), ADediting_1138839(48851432, +), ADediting_1138840(48851433, +), ADediting_1138841(48851450, +), ADediting_1138842(48851459, +), ADediting_1138843(48851462, +), ADediting_1138844(48851489, +), ADediting_1138845(48851496, +), ADediting_1138846(48851501, +), ADediting_1138847(48851506, +), ADediting_1138848(48851517, +), ADediting_1138849(48851553, +), ADediting_1138850(48851563, +), ADediting_1138851(48851571, +), ADediting_1138852(48851596, +), ADediting_1138853(48851601, +), ADediting_1138854(48851618, +), ADediting_1138855(48851620, +), ADediting_1138856(48851621, +), ADediting_1138857(48851625, +), ADediting_1138858(48851626, +), ADediting_1138859(48851641, +), ADediting_1138860(48851644, +), ADediting_1138862(48861423, +), ADediting_1138863(48861504, +), ADediting_1138864(48861505, +), ADediting_1138865(48861539, +), ADediting_1138866(48861565, +), ADediting_1138867(48861579, +), ADediting_1138868(48861580, +), ADediting_1577780(48833090, +), ADediting_1577781(48833202, +), ADediting_1577782(48834667, +), ADediting_1577783(48834735, +), ADediting_1577784(48835008, +), ADediting_1577785(48835086, +), ADediting_1577786(48835100, +), ADediting_1577787(48835108, +), ADediting_1577788(48835208, +), ADediting_1577789(48835758, +), ADediting_1577790(48836840, +), ADediting_1577791(48838166, +), ADediting_1577792(48850333, +), ADediting_1577793(48850389, +), ADediting_1577794(48850466, +), ADediting_1577795(48850475, +), ADediting_1577796(48850691, +), ADediting_1577797(48851424, +), ADediting_1577798(48851438, +), ADediting_1577799(48851478, +), ADediting_1577800(48851492, +), ADediting_1577801(48851646, +), ADediting_1577802(48861643, +), ADediting_1652351(48834313, +), ADediting_1652352(48834369, +), ADediting_1652353(48834584, +), ADediting_1652354(48835156, +), ADediting_1652355(48837180, +), ADediting_1652356(48839158, +), ADediting_1652357(48839260, +), ADediting_1652358(48839280, +), ADediting_1652359(48839305, +), ADediting_1652360(48839338, +), ADediting_1652361(48850721, +), ADediting_1652362(48850757, +), ADediting_1652363(48851502, +), |
Top |
RNA editing positional annotations for OCIAD1 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1138711 | chr4_48832995_+ | intronic |
| ADediting_1138712 | chr4_48833130_+ | intronic |
| ADediting_1138713 | chr4_48833131_+ | intronic |
| ADediting_1138714 | chr4_48833147_+ | intronic |
| ADediting_1138715 | chr4_48833217_+ | intronic |
| ADediting_1138716 | chr4_48834225_+ | intronic |
| ADediting_1138717 | chr4_48834228_+ | intronic |
| ADediting_1138718 | chr4_48834271_+ | intronic |
| ADediting_1138719 | chr4_48834272_+ | intronic |
| ADediting_1138720 | chr4_48834289_+ | intronic |
| ADediting_1138721 | chr4_48834301_+ | intronic |
| ADediting_1138722 | chr4_48834311_+ | intronic |
| ADediting_1138723 | chr4_48834336_+ | intronic |
| ADediting_1138724 | chr4_48834337_+ | intronic |
| ADediting_1138725 | chr4_48834352_+ | intronic |
| ADediting_1138726 | chr4_48834355_+ | intronic |
| ADediting_1138727 | chr4_48834358_+ | intronic |
| ADediting_1138728 | chr4_48834372_+ | intronic |
| ADediting_1138729 | chr4_48834381_+ | intronic |
| ADediting_1138730 | chr4_48834394_+ | intronic |
| ADediting_1138731 | chr4_48834430_+ | intronic |
| ADediting_1138732 | chr4_48834442_+ | intronic |
| ADediting_1138733 | chr4_48834444_+ | intronic |
| ADediting_1138734 | chr4_48834458_+ | intronic |
| ADediting_1138735 | chr4_48834512_+ | intronic |
| ADediting_1138736 | chr4_48834514_+ | intronic |
| ADediting_1138737 | chr4_48834515_+ | intronic |
| ADediting_1138738 | chr4_48834560_+ | intronic |
| ADediting_1138739 | chr4_48834563_+ | intronic |
| ADediting_1138740 | chr4_48834568_+ | intronic |
| ADediting_1138741 | chr4_48834569_+ | intronic |
| ADediting_1138742 | chr4_48834586_+ | intronic |
| ADediting_1138743 | chr4_48834588_+ | intronic |
| ADediting_1138744 | chr4_48834605_+ | intronic |
| ADediting_1138745 | chr4_48834608_+ | intronic |
| ADediting_1138746 | chr4_48834609_+ | intronic |
| ADediting_1138747 | chr4_48834610_+ | intronic |
| ADediting_1138748 | chr4_48834611_+ | intronic |
| ADediting_1138749 | chr4_48834621_+ | intronic |
| ADediting_1138750 | chr4_48834624_+ | intronic |
| ADediting_1138751 | chr4_48834644_+ | intronic |
| ADediting_1138752 | chr4_48834650_+ | intronic |
| ADediting_1138753 | chr4_48834651_+ | intronic |
| ADediting_1138754 | chr4_48834657_+ | intronic |
| ADediting_1138755 | chr4_48834729_+ | intronic |
| ADediting_1138756 | chr4_48834965_+ | intronic |
| ADediting_1138757 | chr4_48835034_+ | intronic |
| ADediting_1138758 | chr4_48835073_+ | intronic |
| ADediting_1138759 | chr4_48835099_+ | intronic |
| ADediting_1138760 | chr4_48835114_+ | intronic |
| ADediting_1138761 | chr4_48835117_+ | intronic |
| ADediting_1138762 | chr4_48835143_+ | intronic |
| ADediting_1138763 | chr4_48835168_+ | intronic |
| ADediting_1138764 | chr4_48835196_+ | intronic |
| ADediting_1138765 | chr4_48835635_+ | intronic |
| ADediting_1138766 | chr4_48835649_+ | intronic |
| ADediting_1138767 | chr4_48835650_+ | intronic |
| ADediting_1138768 | chr4_48835669_+ | intronic |
| ADediting_1138769 | chr4_48835670_+ | intronic |
| ADediting_1138770 | chr4_48835697_+ | intronic |
| ADediting_1138771 | chr4_48835712_+ | intronic |
| ADediting_1138772 | chr4_48835805_+ | intronic |
| ADediting_1138773 | chr4_48837008_+ | intronic |
| ADediting_1138774 | chr4_48837025_+ | intronic |
| ADediting_1138775 | chr4_48837101_+ | intronic |
| ADediting_1138776 | chr4_48837111_+ | intronic |
| ADediting_1138777 | chr4_48837129_+ | intronic |
| ADediting_1138778 | chr4_48837216_+ | UTR3 |
| ADediting_1138779 | chr4_48837235_+ | UTR3 |
| ADediting_1138780 | chr4_48837323_+ | intronic |
| ADediting_1138781 | chr4_48837349_+ | intronic |
| ADediting_1138782 | chr4_48837393_+ | intronic |
| ADediting_1138783 | chr4_48837481_+ | intronic |
| ADediting_1138784 | chr4_48837552_+ | intronic |
| ADediting_1138785 | chr4_48837553_+ | intronic |
| ADediting_1138786 | chr4_48838062_+ | intronic |
| ADediting_1138787 | chr4_48838063_+ | intronic |
| ADediting_1138788 | chr4_48838089_+ | intronic |
| ADediting_1138789 | chr4_48838093_+ | intronic |
| ADediting_1138790 | chr4_48838098_+ | intronic |
| ADediting_1138791 | chr4_48838103_+ | intronic |
| ADediting_1138792 | chr4_48838128_+ | intronic |
| ADediting_1138793 | chr4_48838153_+ | intronic |
| ADediting_1138794 | chr4_48838156_+ | intronic |
| ADediting_1138795 | chr4_48838157_+ | intronic |
| ADediting_1138796 | chr4_48838162_+ | intronic |
| ADediting_1138797 | chr4_48838165_+ | intronic |
| ADediting_1138798 | chr4_48838167_+ | intronic |
| ADediting_1138799 | chr4_48838168_+ | intronic |
| ADediting_1138800 | chr4_48838171_+ | intronic |
| ADediting_1138801 | chr4_48838176_+ | intronic |
| ADediting_1138802 | chr4_48838187_+ | intronic |
| ADediting_1138803 | chr4_48838197_+ | intronic |
| ADediting_1138804 | chr4_48838198_+ | intronic |
| ADediting_1138805 | chr4_48838203_+ | intronic |
| ADediting_1138806 | chr4_48838207_+ | intronic |
| ADediting_1138807 | chr4_48838250_+ | intronic |
| ADediting_1138808 | chr4_48838262_+ | intronic |
| ADediting_1138809 | chr4_48838263_+ | intronic |
| ADediting_1138810 | chr4_48838267_+ | intronic |
| ADediting_1138811 | chr4_48838268_+ | intronic |
| ADediting_1138812 | chr4_48839174_+ | intronic |
| ADediting_1138813 | chr4_48839227_+ | intronic |
| ADediting_1138814 | chr4_48839234_+ | intronic |
| ADediting_1138815 | chr4_48839289_+ | intronic |
| ADediting_1138816 | chr4_48839293_+ | intronic |
| ADediting_1138817 | chr4_48839315_+ | intronic |
| ADediting_1138818 | chr4_48839419_+ | intronic |
| ADediting_1138819 | chr4_48840896_+ | intronic |
| ADediting_1138820 | chr4_48850312_+ | intronic |
| ADediting_1138821 | chr4_48850315_+ | intronic |
| ADediting_1138822 | chr4_48850328_+ | intronic |
| ADediting_1138823 | chr4_48850376_+ | intronic |
| ADediting_1138824 | chr4_48850393_+ | intronic |
| ADediting_1138825 | chr4_48850446_+ | intronic |
| ADediting_1138826 | chr4_48850491_+ | intronic |
| ADediting_1138827 | chr4_48850604_+ | intronic |
| ADediting_1138828 | chr4_48850627_+ | intronic |
| ADediting_1138829 | chr4_48850703_+ | intronic |
| ADediting_1138830 | chr4_48850758_+ | intronic |
| ADediting_1138831 | chr4_48850781_+ | intronic |
| ADediting_1138832 | chr4_48850784_+ | intronic |
| ADediting_1138833 | chr4_48850796_+ | intronic |
| ADediting_1138834 | chr4_48850797_+ | intronic |
| ADediting_1138835 | chr4_48850837_+ | intronic |
| ADediting_1138836 | chr4_48850849_+ | intronic |
| ADediting_1138837 | chr4_48850851_+ | intronic |
| ADediting_1138838 | chr4_48851429_+ | intronic |
| ADediting_1138839 | chr4_48851432_+ | intronic |
| ADediting_1138840 | chr4_48851433_+ | intronic |
| ADediting_1138841 | chr4_48851450_+ | intronic |
| ADediting_1138842 | chr4_48851459_+ | intronic |
| ADediting_1138843 | chr4_48851462_+ | intronic |
| ADediting_1138844 | chr4_48851489_+ | intronic |
| ADediting_1138845 | chr4_48851496_+ | intronic |
| ADediting_1138846 | chr4_48851501_+ | intronic |
| ADediting_1138847 | chr4_48851506_+ | intronic |
| ADediting_1138848 | chr4_48851517_+ | intronic |
| ADediting_1138849 | chr4_48851553_+ | intronic |
| ADediting_1138850 | chr4_48851563_+ | intronic |
| ADediting_1138851 | chr4_48851571_+ | intronic |
| ADediting_1138852 | chr4_48851596_+ | intronic |
| ADediting_1138853 | chr4_48851601_+ | intronic |
| ADediting_1138854 | chr4_48851618_+ | intronic |
| ADediting_1138855 | chr4_48851620_+ | intronic |
| ADediting_1138856 | chr4_48851621_+ | intronic |
| ADediting_1138857 | chr4_48851625_+ | intronic |
| ADediting_1138858 | chr4_48851626_+ | intronic |
| ADediting_1138859 | chr4_48851641_+ | intronic |
| ADediting_1138860 | chr4_48851644_+ | intronic |
| ADediting_1138862 | chr4_48861423_+ | UTR3 |
| ADediting_1138863 | chr4_48861504_+ | UTR3 |
| ADediting_1138864 | chr4_48861505_+ | UTR3 |
| ADediting_1138865 | chr4_48861539_+ | UTR3 |
| ADediting_1138866 | chr4_48861565_+ | UTR3 |
| ADediting_1138867 | chr4_48861579_+ | UTR3 |
| ADediting_1138868 | chr4_48861580_+ | UTR3 |
| ADediting_1577780 | chr4_48833090_+ | intronic |
| ADediting_1577781 | chr4_48833202_+ | intronic |
| ADediting_1577782 | chr4_48834667_+ | intronic |
| ADediting_1577783 | chr4_48834735_+ | intronic |
| ADediting_1577784 | chr4_48835008_+ | intronic |
| ADediting_1577785 | chr4_48835086_+ | intronic |
| ADediting_1577786 | chr4_48835100_+ | intronic |
| ADediting_1577787 | chr4_48835108_+ | intronic |
| ADediting_1577788 | chr4_48835208_+ | intronic |
| ADediting_1577789 | chr4_48835758_+ | intronic |
| ADediting_1577790 | chr4_48836840_+ | intronic |
| ADediting_1577791 | chr4_48838166_+ | intronic |
| ADediting_1577792 | chr4_48850333_+ | intronic |
| ADediting_1577793 | chr4_48850389_+ | intronic |
| ADediting_1577794 | chr4_48850466_+ | intronic |
| ADediting_1577795 | chr4_48850475_+ | intronic |
| ADediting_1577796 | chr4_48850691_+ | intronic |
| ADediting_1577797 | chr4_48851424_+ | intronic |
| ADediting_1577798 | chr4_48851438_+ | intronic |
| ADediting_1577799 | chr4_48851478_+ | intronic |
| ADediting_1577800 | chr4_48851492_+ | intronic |
| ADediting_1577801 | chr4_48851646_+ | intronic |
| ADediting_1577802 | chr4_48861643_+ | UTR3 |
| ADediting_1652351 | chr4_48834313_+ | intronic |
| ADediting_1652352 | chr4_48834369_+ | intronic |
| ADediting_1652353 | chr4_48834584_+ | intronic |
| ADediting_1652354 | chr4_48835156_+ | intronic |
| ADediting_1652355 | chr4_48837180_+ | UTR3 |
| ADediting_1652356 | chr4_48839158_+ | intronic |
| ADediting_1652357 | chr4_48839260_+ | intronic |
| ADediting_1652358 | chr4_48839280_+ | intronic |
| ADediting_1652359 | chr4_48839305_+ | intronic |
| ADediting_1652360 | chr4_48839338_+ | intronic |
| ADediting_1652361 | chr4_48850721_+ | intronic |
| ADediting_1652362 | chr4_48850757_+ | intronic |
| ADediting_1652363 | chr4_48851502_+ | intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1138711 | chr4_48832995_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138712 | chr4_48833130_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138713 | chr4_48833131_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138714 | chr4_48833147_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138715 | chr4_48833217_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138716 | chr4_48834225_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138717 | chr4_48834228_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138718 | chr4_48834271_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138719 | chr4_48834272_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138720 | chr4_48834289_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138721 | chr4_48834301_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138722 | chr4_48834311_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138723 | chr4_48834336_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138724 | chr4_48834337_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138725 | chr4_48834352_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138726 | chr4_48834355_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138727 | chr4_48834358_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138728 | chr4_48834372_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138729 | chr4_48834381_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138730 | chr4_48834394_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138731 | chr4_48834430_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138732 | chr4_48834442_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138733 | chr4_48834444_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138734 | chr4_48834458_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138735 | chr4_48834512_+ | SINE | Alu | Name=AluJo |
| ADediting_1138736 | chr4_48834514_+ | SINE | Alu | Name=AluJo |
| ADediting_1138737 | chr4_48834515_+ | SINE | Alu | Name=AluJo |
| ADediting_1138738 | chr4_48834560_+ | SINE | Alu | Name=AluJo |
| ADediting_1138739 | chr4_48834563_+ | SINE | Alu | Name=AluJo |
| ADediting_1138740 | chr4_48834568_+ | SINE | Alu | Name=AluJo |
| ADediting_1138741 | chr4_48834569_+ | SINE | Alu | Name=AluJo |
| ADediting_1138742 | chr4_48834586_+ | SINE | Alu | Name=AluJo |
| ADediting_1138743 | chr4_48834588_+ | SINE | Alu | Name=AluJo |
| ADediting_1138744 | chr4_48834605_+ | SINE | Alu | Name=AluJo |
| ADediting_1138745 | chr4_48834608_+ | SINE | Alu | Name=AluJo |
| ADediting_1138746 | chr4_48834609_+ | SINE | Alu | Name=AluJo |
| ADediting_1138747 | chr4_48834610_+ | SINE | Alu | Name=AluJo |
| ADediting_1138748 | chr4_48834611_+ | SINE | Alu | Name=AluJo |
| ADediting_1138749 | chr4_48834621_+ | SINE | Alu | Name=AluJo |
| ADediting_1138750 | chr4_48834624_+ | SINE | Alu | Name=AluJo |
| ADediting_1138751 | chr4_48834644_+ | SINE | Alu | Name=AluJo |
| ADediting_1138752 | chr4_48834650_+ | SINE | Alu | Name=AluJo |
| ADediting_1138753 | chr4_48834651_+ | SINE | Alu | Name=AluJo |
| ADediting_1138754 | chr4_48834657_+ | SINE | Alu | Name=AluJo |
| ADediting_1138755 | chr4_48834729_+ | SINE | Alu | Name=AluJo |
| ADediting_1138756 | chr4_48834965_+ | SINE | Alu | Name=AluSx |
| ADediting_1138757 | chr4_48835034_+ | SINE | Alu | Name=AluSx |
| ADediting_1138758 | chr4_48835073_+ | SINE | Alu | Name=AluSx |
| ADediting_1138759 | chr4_48835099_+ | SINE | Alu | Name=AluSx |
| ADediting_1138760 | chr4_48835114_+ | SINE | Alu | Name=AluSx |
| ADediting_1138761 | chr4_48835117_+ | SINE | Alu | Name=AluSx |
| ADediting_1138762 | chr4_48835143_+ | SINE | Alu | Name=AluSx |
| ADediting_1138763 | chr4_48835168_+ | SINE | Alu | Name=AluSx |
| ADediting_1138764 | chr4_48835196_+ | SINE | Alu | Name=AluSx |
| ADediting_1138765 | chr4_48835635_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138766 | chr4_48835649_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138767 | chr4_48835650_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138768 | chr4_48835669_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138769 | chr4_48835670_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138770 | chr4_48835697_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138771 | chr4_48835712_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1138772 | chr4_48835805_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1138773 | chr4_48837008_+ | SINE | Alu | Name=AluY |
| ADediting_1138774 | chr4_48837025_+ | SINE | Alu | Name=AluY |
| ADediting_1138775 | chr4_48837101_+ | SINE | Alu | Name=AluY |
| ADediting_1138776 | chr4_48837111_+ | SINE | Alu | Name=AluY |
| ADediting_1138777 | chr4_48837129_+ | SINE | Alu | Name=AluY |
| ADediting_1138778 | chr4_48837216_+ | SINE | Alu | Name=AluY |
| ADediting_1138779 | chr4_48837235_+ | SINE | Alu | Name=AluY |
| ADediting_1138780 | chr4_48837323_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138781 | chr4_48837349_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138782 | chr4_48837393_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138783 | chr4_48837481_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138784 | chr4_48837552_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138785 | chr4_48837553_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1138786 | chr4_48838062_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138787 | chr4_48838063_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138788 | chr4_48838089_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138789 | chr4_48838093_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138790 | chr4_48838098_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138791 | chr4_48838103_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138792 | chr4_48838128_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138793 | chr4_48838153_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138794 | chr4_48838156_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138795 | chr4_48838157_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138796 | chr4_48838162_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138797 | chr4_48838165_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138798 | chr4_48838167_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138799 | chr4_48838168_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138800 | chr4_48838171_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138801 | chr4_48838176_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138802 | chr4_48838187_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138803 | chr4_48838197_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138804 | chr4_48838198_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138805 | chr4_48838203_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138806 | chr4_48838207_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138807 | chr4_48838250_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138808 | chr4_48838262_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138809 | chr4_48838263_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138810 | chr4_48838267_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138811 | chr4_48838268_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1138812 | chr4_48839174_+ | SINE | Alu | Name=AluSz |
| ADediting_1138813 | chr4_48839227_+ | SINE | Alu | Name=AluSz |
| ADediting_1138814 | chr4_48839234_+ | SINE | Alu | Name=AluSz |
| ADediting_1138815 | chr4_48839289_+ | SINE | Alu | Name=AluSz |
| ADediting_1138816 | chr4_48839293_+ | SINE | Alu | Name=AluSz |
| ADediting_1138817 | chr4_48839315_+ | SINE | Alu | Name=AluSz |
| ADediting_1138818 | chr4_48839419_+ | SINE | Alu | Name=AluSz |
| ADediting_1138819 | chr4_48840896_+ | SINE | Alu | Name=AluJb |
| ADediting_1138820 | chr4_48850312_+ | SINE | Alu | Name=AluJo |
| ADediting_1138821 | chr4_48850315_+ | SINE | Alu | Name=AluJo |
| ADediting_1138822 | chr4_48850328_+ | SINE | Alu | Name=AluJo |
| ADediting_1138823 | chr4_48850376_+ | SINE | Alu | Name=AluJo |
| ADediting_1138824 | chr4_48850393_+ | SINE | Alu | Name=AluJo |
| ADediting_1138825 | chr4_48850446_+ | SINE | Alu | Name=AluJo |
| ADediting_1138826 | chr4_48850491_+ | SINE | Alu | Name=AluJo |
| ADediting_1138827 | chr4_48850604_+ | SINE | Alu | Name=AluSz |
| ADediting_1138828 | chr4_48850627_+ | SINE | Alu | Name=AluSz |
| ADediting_1138829 | chr4_48850703_+ | SINE | Alu | Name=AluSz |
| ADediting_1138830 | chr4_48850758_+ | SINE | Alu | Name=AluSz |
| ADediting_1138831 | chr4_48850781_+ | SINE | Alu | Name=AluSz |
| ADediting_1138832 | chr4_48850784_+ | SINE | Alu | Name=AluSz |
| ADediting_1138833 | chr4_48850796_+ | SINE | Alu | Name=AluSz |
| ADediting_1138834 | chr4_48850797_+ | SINE | Alu | Name=AluSz |
| ADediting_1138835 | chr4_48850837_+ | SINE | Alu | Name=AluSz |
| ADediting_1138836 | chr4_48850849_+ | SINE | Alu | Name=AluSz |
| ADediting_1138837 | chr4_48850851_+ | SINE | Alu | Name=AluSz |
| ADediting_1138838 | chr4_48851429_+ | SINE | Alu | Name=AluJo |
| ADediting_1138839 | chr4_48851432_+ | SINE | Alu | Name=AluJo |
| ADediting_1138840 | chr4_48851433_+ | SINE | Alu | Name=AluJo |
| ADediting_1138841 | chr4_48851450_+ | SINE | Alu | Name=AluJo |
| ADediting_1138842 | chr4_48851459_+ | SINE | Alu | Name=AluJo |
| ADediting_1138843 | chr4_48851462_+ | SINE | Alu | Name=AluJo |
| ADediting_1138844 | chr4_48851489_+ | SINE | Alu | Name=AluJo |
| ADediting_1138845 | chr4_48851496_+ | SINE | Alu | Name=AluJo |
| ADediting_1138846 | chr4_48851501_+ | SINE | Alu | Name=AluJo |
| ADediting_1138847 | chr4_48851506_+ | SINE | Alu | Name=AluJo |
| ADediting_1138848 | chr4_48851517_+ | SINE | Alu | Name=AluJo |
| ADediting_1138849 | chr4_48851553_+ | SINE | Alu | Name=AluJo |
| ADediting_1138850 | chr4_48851563_+ | SINE | Alu | Name=AluJo |
| ADediting_1138851 | chr4_48851571_+ | SINE | Alu | Name=AluJo |
| ADediting_1138852 | chr4_48851596_+ | SINE | Alu | Name=AluJo |
| ADediting_1138853 | chr4_48851601_+ | SINE | Alu | Name=AluJo |
| ADediting_1138854 | chr4_48851618_+ | SINE | Alu | Name=AluJo |
| ADediting_1138855 | chr4_48851620_+ | SINE | Alu | Name=AluJo |
| ADediting_1138856 | chr4_48851621_+ | SINE | Alu | Name=AluJo |
| ADediting_1138857 | chr4_48851625_+ | SINE | Alu | Name=AluJo |
| ADediting_1138858 | chr4_48851626_+ | SINE | Alu | Name=AluJo |
| ADediting_1138859 | chr4_48851641_+ | SINE | Alu | Name=AluJo |
| ADediting_1138860 | chr4_48851644_+ | SINE | Alu | Name=AluJo |
| ADediting_1138862 | chr4_48861423_+ | SINE | Alu | Name=AluJr |
| ADediting_1138863 | chr4_48861504_+ | SINE | Alu | Name=AluJr |
| ADediting_1138864 | chr4_48861505_+ | SINE | Alu | Name=AluJr |
| ADediting_1138865 | chr4_48861539_+ | SINE | Alu | Name=AluJr |
| ADediting_1138866 | chr4_48861565_+ | SINE | Alu | Name=AluJr |
| ADediting_1138867 | chr4_48861579_+ | SINE | Alu | Name=AluJr |
| ADediting_1138868 | chr4_48861580_+ | SINE | Alu | Name=AluJr |
| ADediting_1577780 | chr4_48833090_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1577781 | chr4_48833202_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1577782 | chr4_48834667_+ | SINE | Alu | Name=AluJo |
| ADediting_1577783 | chr4_48834735_+ | SINE | Alu | Name=AluJo |
| ADediting_1577784 | chr4_48835008_+ | SINE | Alu | Name=AluSx |
| ADediting_1577785 | chr4_48835086_+ | SINE | Alu | Name=AluSx |
| ADediting_1577786 | chr4_48835100_+ | SINE | Alu | Name=AluSx |
| ADediting_1577787 | chr4_48835108_+ | SINE | Alu | Name=AluSx |
| ADediting_1577788 | chr4_48835208_+ | SINE | Alu | Name=AluSx |
| ADediting_1577789 | chr4_48835758_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1577791 | chr4_48838166_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1577792 | chr4_48850333_+ | SINE | Alu | Name=AluJo |
| ADediting_1577793 | chr4_48850389_+ | SINE | Alu | Name=AluJo |
| ADediting_1577794 | chr4_48850466_+ | SINE | Alu | Name=AluJo |
| ADediting_1577795 | chr4_48850475_+ | SINE | Alu | Name=AluJo |
| ADediting_1577796 | chr4_48850691_+ | SINE | Alu | Name=AluSz |
| ADediting_1577797 | chr4_48851424_+ | SINE | Alu | Name=AluJo |
| ADediting_1577798 | chr4_48851438_+ | SINE | Alu | Name=AluJo |
| ADediting_1577799 | chr4_48851478_+ | SINE | Alu | Name=AluJo |
| ADediting_1577800 | chr4_48851492_+ | SINE | Alu | Name=AluJo |
| ADediting_1577801 | chr4_48851646_+ | SINE | Alu | Name=AluJo |
| ADediting_1577802 | chr4_48861643_+ | SINE | Alu | Name=AluJr |
| ADediting_1652351 | chr4_48834313_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1652352 | chr4_48834369_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1652353 | chr4_48834584_+ | SINE | Alu | Name=AluJo |
| ADediting_1652354 | chr4_48835156_+ | SINE | Alu | Name=AluSx |
| ADediting_1652355 | chr4_48837180_+ | SINE | Alu | Name=AluY |
| ADediting_1652356 | chr4_48839158_+ | SINE | Alu | Name=AluSz |
| ADediting_1652357 | chr4_48839260_+ | SINE | Alu | Name=AluSz |
| ADediting_1652358 | chr4_48839280_+ | SINE | Alu | Name=AluSz |
| ADediting_1652359 | chr4_48839305_+ | SINE | Alu | Name=AluSz |
| ADediting_1652360 | chr4_48839338_+ | SINE | Alu | Name=AluSz |
| ADediting_1652361 | chr4_48850721_+ | SINE | Alu | Name=AluSz |
| ADediting_1652362 | chr4_48850757_+ | SINE | Alu | Name=AluSz |
| ADediting_1652363 | chr4_48851502_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for OCIAD1 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for OCIAD1 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for OCIAD1 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for OCIAD1 |
RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
![]() |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1138862 | chr4_48861423_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-3622a-5p | chr4 | 48861421 | 48861427 | 7mer-m8 | 48861408 | 48861428 | 143 | -24.97 |
| ADediting_1138862 | chr4_48861423_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-3622a-5p | chr4 | 48861421 | 48861427 | 7mer-m8 | 48861408 | 48861428 | 143 | -24.97 |
| ADediting_1138863 | chr4_48861504_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-367-5p | chr4 | 48861497 | 48861504 | 8mer-1a | 48861483 | 48861504 | 143 | -14.81 |
| ADediting_1138863 | chr4_48861504_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-367-5p | chr4 | 48861497 | 48861504 | 8mer-1a | 48861483 | 48861504 | 143 | -14.81 |
| ADediting_1138864 | chr4_48861505_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-4312 | chr4 | 48861500 | 48861506 | 7mer-m8 | 48861489 | 48861507 | 148 | -16.16 |
| ADediting_1138864 | chr4_48861505_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-4312 | chr4 | 48861500 | 48861506 | 7mer-m8 | 48861489 | 48861507 | 148 | -16.16 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-140-3p | chr4 | 48861560 | 48861566 | 7mer-m8 | 48861544 | 48861567 | 155 | -22.25 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-140-3p | chr4 | 48861560 | 48861566 | 7mer-m8 | 48861544 | 48861567 | 155 | -22.25 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-1297 | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861565 | 48861580 | 157 | -16.94 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-26a-5p | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861560 | 48861580 | 159 | -17.67 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-26b-5p | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861561 | 48861580 | 163 | -19.72 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-4465 | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861556 | 48861580 | 153 | -21.65 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-513c-5p | chr4 | 48861575 | 48861581 | 7mer-m8 | 48861561 | 48861582 | 147 | -15 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-514b-5p | chr4 | 48861575 | 48861581 | 7mer-m8 | 48861560 | 48861582 | 146 | -17.07 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-1297 | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861565 | 48861580 | 157 | -16.94 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-26a-5p | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861560 | 48861580 | 159 | -17.67 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-26b-5p | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861561 | 48861580 | 163 | -19.72 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-4465 | chr4 | 48861573 | 48861579 | 7mer-m8 | 48861556 | 48861580 | 153 | -21.65 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-513c-5p | chr4 | 48861575 | 48861581 | 7mer-m8 | 48861561 | 48861582 | 147 | -15 |
| ADediting_1138867 | chr4_48861579_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-514b-5p | chr4 | 48861575 | 48861581 | 7mer-m8 | 48861560 | 48861582 | 146 | -17.07 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-6791-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861565 | 48861585 | 150 | -17.56 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-6829-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861566 | 48861585 | 151 | -18.65 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-6791-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861565 | 48861585 | 150 | -17.56 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-6829-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861566 | 48861585 | 151 | -18.65 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1138863 | chr4_48861504_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-4790-5p | chr4 | 48861502 | 48861508 | 7mer-m8 | 48861490 | 48861509 | 142 | -11.34 |
| ADediting_1138863 | chr4_48861504_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-4790-5p | chr4 | 48861502 | 48861508 | 7mer-m8 | 48861490 | 48861509 | 142 | -11.34 |
| ADediting_1138864 | chr4_48861505_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-4790-5p | chr4 | 48861502 | 48861508 | 7mer-m8 | 48861490 | 48861509 | 142 | -11.34 |
| ADediting_1138864 | chr4_48861505_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-4790-5p | chr4 | 48861502 | 48861508 | 7mer-m8 | 48861490 | 48861509 | 142 | -11.34 |
| ADediting_1138865 | chr4_48861539_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-4735-5p | chr4 | 48861533 | 48861539 | 7mer-m8 | 48861519 | 48861540 | 140 | -4.43 |
| ADediting_1138865 | chr4_48861539_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-4735-5p | chr4 | 48861533 | 48861539 | 7mer-m8 | 48861519 | 48861540 | 140 | -4.43 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-3169 | chr4 | 48861564 | 48861570 | 7mer-1a | 48861552 | 48861570 | 140 | -22.96 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-4759 | chr4 | 48861563 | 48861570 | 8mer-1a | 48861550 | 48861570 | 145 | -13.32 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-7151-3p | chr4 | 48861558 | 48861564 | 7mer-m8 | 48861545 | 48861565 | 140 | -20.9 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-3169 | chr4 | 48861564 | 48861570 | 7mer-1a | 48861552 | 48861570 | 140 | -22.96 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-4759 | chr4 | 48861563 | 48861570 | 8mer-1a | 48861550 | 48861570 | 145 | -13.32 |
| ADediting_1138866 | chr4_48861565_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-7151-3p | chr4 | 48861558 | 48861564 | 7mer-m8 | 48861545 | 48861565 | 140 | -20.9 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-2682-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861564 | 48861585 | 147 | -12.94 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-6781-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861564 | 48861585 | 140 | -11.41 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-2682-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861564 | 48861585 | 147 | -12.94 |
| ADediting_1138868 | chr4_48861580_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-6781-3p | chr4 | 48861578 | 48861584 | 7mer-m8 | 48861564 | 48861585 | 140 | -11.41 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-337-3p | chr4 | 48861329 | 48861336 | 8mer-1a | 48861316 | 48861336 | 142 | -13.49 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-337-3p | chr4 | 48861329 | 48861336 | 8mer-1a | 48861316 | 48861336 | 142 | -13.49 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109180.14 | ENST00000425583.6 | OCIAD1-204 | hsa-miR-5579-3p | chr4 | 48861306 | 48861312 | 7mer-m8 | 48861291 | 48861313 | 154 | -14.4 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109180.14 | ENST00000444354.6 | OCIAD1-205 | hsa-miR-5579-3p | chr4 | 48861306 | 48861312 | 7mer-m8 | 48861291 | 48861313 | 154 | -14.4 |
Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for OCIAD1 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000444354.6 | protein_coding | ![]() | ![]() |
| ENST00000425583.6 | protein_coding | ![]() | ![]() |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1138862 | ENST00000444354.6 | chr4_48861423_+ | 1393 | -463.30 | -463.40 | -473.60 |
| ADediting_1138863 | ENST00000444354.6 | chr4_48861504_+ | 1474 | -463.40 | -463.40 | -473.60 |
| ADediting_1138864 | ENST00000444354.6 | chr4_48861505_+ | 1475 | -464.70 | -463.40 | -473.60 |
| ADediting_1138865 | ENST00000444354.6 | chr4_48861539_+ | 1509 | -464.30 | -463.40 | -473.60 |
| ADediting_1138866 | ENST00000444354.6 | chr4_48861565_+ | 1535 | -462.10 | -463.40 | -473.60 |
| ADediting_1138867 | ENST00000444354.6 | chr4_48861579_+ | 1549 | -464.10 | -463.40 | -473.60 |
| ADediting_1138868 | ENST00000444354.6 | chr4_48861580_+ | 1550 | -465.70 | -463.40 | -473.60 |
| ADediting_1577802 | ENST00000444354.6 | chr4_48861643_+ | 1613 | -463.40 | -463.40 | -473.60 |
| ADediting_1138862 | ENST00000425583.6 | chr4_48861423_+ | 1521 | -542.90 | -543.00 | -551.10 |
| ADediting_1138863 | ENST00000425583.6 | chr4_48861504_+ | 1602 | -543.00 | -543.00 | -551.10 |
| ADediting_1138864 | ENST00000425583.6 | chr4_48861505_+ | 1603 | -544.30 | -543.00 | -551.10 |
| ADediting_1138865 | ENST00000425583.6 | chr4_48861539_+ | 1637 | -543.90 | -543.00 | -551.10 |
| ADediting_1138866 | ENST00000425583.6 | chr4_48861565_+ | 1663 | -541.70 | -543.00 | -551.10 |
| ADediting_1138867 | ENST00000425583.6 | chr4_48861579_+ | 1677 | -543.70 | -543.00 | -551.10 |
| ADediting_1138868 | ENST00000425583.6 | chr4_48861580_+ | 1678 | -545.30 | -543.00 | -551.10 |
| ADediting_1577802 | ENST00000425583.6 | chr4_48861643_+ | 1741 | -543.00 | -543.00 | -551.10 |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for OCIAD1 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1138714 | chr4_48833147_+ | 0.0261718262933553 | 0.181567512428336 | 0.000161364347008551 | 0.303303931180197 | 0.103365994909419 | 0.133507676688394 |
| CER | ADediting_1138715 | chr4_48833217_+ | 0.164259290675255 | 0.114148905054305 | 4.53628350831838e-05 | 0.326549588922902 | 0.0399733690667009 | 0.167922295366338 |
| DLPFC | ADediting_1138722 | chr4_48834311_+ | 0.774265132996933 | 0.0163541471974717 | 0.123295894223033 | -0.087713358746521 | 1.47848312683463e-12 | 0.387658573232076 |
| DLPFC | ADediting_1138794 | chr4_48838156_+ | 0.791807400598229 | 0.0150521243445124 | 0.27222972171582 | -0.0625505346365882 | 1.32938071350476e-09 | 0.33571103834201 |
| DLPFC | ADediting_1138796 | chr4_48838162_+ | 0.0809292081086464 | 0.0992835355294986 | 0.980182045303697 | -0.00141657759030285 | 8.41010025641312e-11 | 0.357938077490351 |
| DLPFC | ADediting_1138813 | chr4_48839227_+ | 0.190132591373247 | 0.0746112725032305 | 0.73925951129285 | -0.0189786734250599 | 4.98102932374922e-10 | 0.343817048988126 |
| CER | ADediting_1138820 | chr4_48850312_+ | 0.00926935779228503 | 0.211804730321707 | 9.55923254845407e-05 | 0.313127939944047 | 0.867720099139703 | 0.0137132480930805 |
| CER | ADediting_1138821 | chr4_48850315_+ | 0.0337559727895092 | 0.173474879993012 | 7.42067321416095e-05 | 0.317759191018996 | 0.706720759540015 | 0.0309735484680428 |
| CER | ADediting_1138822 | chr4_48850328_+ | 0.00717163364412045 | 0.218702262811108 | 0.000188170961737872 | 0.300353349377322 | 0.606939434463372 | 0.0423397780634141 |
| CER | ADediting_1138823 | chr4_48850376_+ | 0.00920660748953763 | 0.211989967611281 | 3.88734965764503e-05 | 0.329252203776157 | 0.435482923719672 | 0.0641449564193513 |
| CER | ADediting_1138824 | chr4_48850393_+ | 0.00418385251909742 | 0.232571378753454 | 5.85277853600074e-06 | 0.360503366313586 | 0.710411319502691 | -0.0305654309889563 |
| CER | ADediting_1138825 | chr4_48850446_+ | 0.00311938475412304 | 0.239808077541666 | 1.26590104292883e-06 | 0.383566327700741 | 0.504719888753277 | 0.0548850633609398 |
| CER | ADediting_1138826 | chr4_48850491_+ | 0.000333833816807751 | 0.289059701222375 | 7.87249649860628e-07 | 0.390376488801645 | 0.279768426540152 | 0.0888186574801602 |
| DLPFC | ADediting_1138828 | chr4_48850627_+ | 0.0314336731269091 | 0.122234425584281 | 0.663552206091935 | -0.0248035382154302 | 1.79842402235778e-12 | 0.38628542600816 |
| CER | ADediting_1138828 | chr4_48850627_+ | 0.00053988281107324 | 0.279215218610976 | 9.34017886167393e-07 | 0.387943094089898 | 0.228197439137836 | 0.0989752695851909 |
| DLPFC | ADediting_1138829 | chr4_48850703_+ | 0.12021514693629 | 0.0884382143190322 | 0.382960431816628 | -0.0497222996631526 | 1.96006033790238e-13 | 0.401462596725649 |
| CER | ADediting_1138829 | chr4_48850703_+ | 0.00291903220548502 | 0.241415456398423 | 1.8625578418591e-06 | 0.37791447682487 | 0.0235580589008762 | 0.184826506390039 |
| DLPFC | ADediting_1138831 | chr4_48850781_+ | 0.129145739205278 | 0.0863748143635982 | 0.271172064095344 | -0.0626884289996716 | 1.10462418957306e-11 | 0.373246660015525 |
| CER | ADediting_1138831 | chr4_48850781_+ | 0.00116685874789645 | 0.262632426070179 | 1.02103488175156e-06 | 0.386667358101884 | 0.144236791307317 | 0.119796690448612 |
| CER | ADediting_1138836 | chr4_48850849_+ | 4.98240451011763e-05 | 0.324894906030687 | 6.9282054715678e-09 | 0.451062516038166 | 0.17083821835684 | 0.112406071487821 |
| CER | ADediting_1138839 | chr4_48851432_+ | 0.0343871089577931 | 0.172873572734967 | 0.00211763629403074 | 0.249044705175444 | 0.000157665544976056 | 0.303746419962329 |
| CER | ADediting_1138841 | chr4_48851450_+ | 0.00353126308534058 | 0.236776998342164 | 7.45800477750796e-06 | 0.356683634998469 | 0.0858271955154107 | 0.140738777047579 |
| CER | ADediting_1138842 | chr4_48851459_+ | 0.00356803280461028 | 0.236522140839154 | 1.03005052365983e-05 | 0.351516881809953 | 0.204130102284393 | 0.10427404650943 |
| CER | ADediting_1138845 | chr4_48851496_+ | 0.0468029315861904 | 0.16260426788313 | 8.46404344775798e-05 | 0.315362719405219 | 0.144372799388817 | 0.119756385980415 |
| CER | ADediting_1138849 | chr4_48851553_+ | 5.31544925931146e-05 | 0.323747931242057 | 2.17007134115326e-10 | 0.48897324325384 | 0.195559059445221 | 0.106269277497065 |
| CER | ADediting_1138851 | chr4_48851571_+ | 5.50097070318808e-05 | 0.323137924606342 | 4.9424290815345e-10 | 0.480373871780877 | 0.341598615063203 | 0.0781848616753087 |
| CER | ADediting_1138854 | chr4_48851618_+ | 0.00721915591805595 | 0.218527217876017 | 5.35562139156677e-06 | 0.361890156548988 | 0.154699951900132 | 0.116776603800633 |
| CER | ADediting_1138855 | chr4_48851620_+ | 0.00720415590158441 | 0.218582358532276 | 3.49403906958443e-05 | 0.331104849054294 | 0.944936864438727 | 0.00568676486304514 |
| CER | ADediting_1138856 | chr4_48851621_+ | 0.00490818567718432 | 0.228544337485395 | 1.19351452289071e-06 | 0.384418895572008 | 0.599552210280607 | 0.0432111583953468 |
| CER | ADediting_1138866 | chr4_48861565_+ | 0.00262185592182157 | 0.243993560323098 | 2.46231792965964e-05 | 0.337100779898982 | 0.0189082838373095 | 0.191483882841351 |
| CER | ADediting_1138868 | chr4_48861580_+ | 0.0364536752279043 | 0.170967859746913 | 6.29295862740971e-05 | 0.32073362823539 | 0.376022046058554 | 0.0727933231208765 |
| CER | ADediting_1577793 | chr4_48850389_+ | 0.02019709556843 | 0.189508370064157 | 3.93839270827324e-05 | 0.329024814393262 | 0.893742841167986 | 0.0109975911514812 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.72011197403891e-73 | 0.80899793677326 | 4.06730005780009e-73 | 0.809203874150593 | 0.379670209260053 | 0.0500666384339113 |
| AC | 1.11970110400336e-102 | 0.919695143307876 | 2.08025969884998e-81 | 0.878215225474367 | 3.52585965379205e-08 | 0.339942916912101 |
| PCC | 1.14798628591414e-47 | 0.819943095610489 | 2.88416329512411e-50 | 0.832090665517275 | 0.114808346933676 | 0.114479709525686 |
| CER | 2.6350990106257e-21 | 0.675237001007079 | 3.13028810696291e-09 | 0.46017673498234 | 0.354754024939471 | 0.0760860950265081 |
| TCX | 2.97552317144792e-31 | 0.774628393981339 | 1.02855728464193e-23 | 0.703531309139268 | 0.229613938065437 | -0.0986760202298209 |
| FP | 3.14483284677198e-24 | 0.666559251818933 | 2.03974784751039e-25 | 0.679115709809806 | 0.724267791512812 | -0.0266234192521016 |
| IFG | 0.00249211878190358 | 0.577717051993375 | 0.0755010263393807 | 0.361849029317398 | 0.300938866989055 | -0.21547289854713 |
| PG | 6.48155225885095e-50 | 0.836341258903335 | 1.12247324843381e-28 | 0.699707185564895 | 0.379084198595227 | -0.0648636128357527 |
| STG | 6.24793497222591e-21 | 0.812709739221371 | 2.68676288300331e-17 | 0.764357886698768 | 0.242476639035717 | -0.128927356231366 |
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Relation with AD stages for OCIAD1 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1138836 | chr4_48850849_+ | 0.00130165782939226 | 0.305543357985358 |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for OCIAD1 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for OCIAD1 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |