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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for TTC19

check button Gene summary
Gene informationGene symbol

TTC19

Gene ID

54902

Gene nametetratricopeptide repeat domain 19
Synonyms2010204O13Rik|MC3DN2
Cytomap

17p12

Type of geneprotein-coding
Descriptiontetratricopeptide repeat protein 19, mitochondrialTPR repeat protein 19
Modification date20200327
UniProtAcc

Q6DKK2,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for TTC19

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_587881(16002210, +), ADediting_587882(16002234, +), ADediting_587883(16002386, +), ADediting_587884(16002411, +), ADediting_587885(16002439, +), ADediting_587886(16006254, +), ADediting_587887(16010319, +), ADediting_587888(16010446, +), ADediting_587889(16010671, +), ADediting_587890(16010679, +), ADediting_587891(16010734, +), ADediting_587892(16011212, +), ADediting_587893(16011255, +), ADediting_587894(16011257, +), ADediting_587895(16011261, +), ADediting_587896(16011280, +), ADediting_587897(16011281, +), ADediting_587898(16011285, +), ADediting_587899(16011291, +), ADediting_587900(16011310, +), ADediting_587901(16011320, +), ADediting_587902(16011322, +), ADediting_587903(16011354, +), ADediting_587904(16011360, +), ADediting_587905(16011363, +), ADediting_587906(16011377, +), ADediting_587907(16011425, +), ADediting_587908(16011435, +), ADediting_587909(16011447, +), ADediting_587910(16012255, +), ADediting_587911(16012256, +), ADediting_587912(16012279, +), ADediting_587913(16012286, +), ADediting_587914(16012287, +), ADediting_587915(16012310, +), ADediting_587916(16012311, +), ADediting_587917(16012353, +), ADediting_587918(16012359, +), ADediting_587919(16012365, +), ADediting_587920(16012387, +), ADediting_587921(16012390, +), ADediting_587922(16012398, +), ADediting_587923(16012466, +), ADediting_587924(16012613, +), ADediting_587925(16012618, +), ADediting_587926(16012619, +), ADediting_587927(16012639, +), ADediting_587928(16012656, +), ADediting_587929(16012668, +), ADediting_587930(16012686, +), ADediting_587931(16012718, +), ADediting_587932(16012738, +), ADediting_587933(16012772, +), ADediting_587934(16012790, +), ADediting_587935(16012791, +), ADediting_587936(16012799, +), ADediting_587937(16012800, +), ADediting_587938(16012812, +), ADediting_587939(16012931, +), ADediting_587940(16012939, +), ADediting_587941(16012940, +), ADediting_587942(16012947, +), ADediting_587943(16012948, +), ADediting_587944(16012954, +), ADediting_587945(16012956, +), ADediting_587946(16012964, +), ADediting_587947(16012969, +), ADediting_587948(16012970, +), ADediting_587949(16012993, +), ADediting_587950(16013005, +), ADediting_587951(16013008, +), ADediting_587952(16013048, +), ADediting_587953(16013050, +), ADediting_587954(16013052, +), ADediting_587955(16013054, +), ADediting_587956(16013057, +), ADediting_587957(16013073, +), ADediting_587958(16013075, +), ADediting_587959(16013089, +), ADediting_587960(16013093, +), ADediting_587961(16013097, +), ADediting_587962(16013110, +), ADediting_587963(16013113, +), ADediting_587964(16013118, +), ADediting_587965(16013119, +), ADediting_587966(16013124, +), ADediting_587967(16013129, +), ADediting_587968(16013130, +), ADediting_587969(16013158, +), ADediting_587970(16013183, +), ADediting_587971(16016632, +), ADediting_587972(16016657, +), ADediting_587973(16016658, +), ADediting_587974(16016675, +), ADediting_587975(16016697, +), ADediting_587976(16016699, +), ADediting_587977(16016724, +), ADediting_587978(16016755, +), ADediting_587979(16016758, +), ADediting_587980(16016832, +), ADediting_587981(16016838, +), ADediting_587982(16016894, +), ADediting_587983(16016904, +), ADediting_587984(16016928, +), ADediting_587985(16016968, +), ADediting_587986(16016970, +), ADediting_587987(16017302, +), ADediting_587988(16017306, +), ADediting_587989(16017310, +), ADediting_587990(16017326, +), ADediting_587991(16017328, +), ADediting_587992(16017334, +), ADediting_587993(16017338, +), ADediting_587994(16017355, +), ADediting_587995(16017374, +), ADediting_587996(16017376, +), ADediting_587997(16017377, +), ADediting_587998(16017381, +), ADediting_587999(16017394, +), ADediting_588000(16017409, +), ADediting_588001(16017431, +), ADediting_588002(16017433, +), ADediting_588003(16017439, +), ADediting_588004(16017504, +), ADediting_588005(16017505, +), ADediting_588006(16017559, +), ADediting_588007(16017578, +), ADediting_588008(16017640, +), ADediting_588009(16017641, +), ADediting_588010(16017646, +), ADediting_588011(16017667, +), ADediting_588012(16017681, +), ADediting_588013(16017706, +), ADediting_588014(16017711, +), ADediting_588015(16017716, +), ADediting_588016(16017744, +), ADediting_588017(16018530, +), ADediting_588018(16018538, +), ADediting_588019(16018570, +), ADediting_588020(16018574, +), ADediting_588021(16018581, +), ADediting_588022(16018586, +), ADediting_588023(16018593, +), ADediting_588024(16018600, +), ADediting_588025(16018619, +), ADediting_588026(16018624, +), ADediting_588027(16018632, +), ADediting_588028(16018633, +), ADediting_588029(16018636, +), ADediting_588030(16018641, +), ADediting_588031(16018681, +), ADediting_588032(16018705, +), ADediting_588033(16018708, +), ADediting_588034(16018717, +), ADediting_588035(16018729, +), ADediting_588036(16018730, +), ADediting_588037(16018741, +), ADediting_588038(16018742, +), ADediting_588039(16018743, +), ADediting_588040(16018746, +), ADediting_588041(16018747, +), ADediting_588042(16018751, +), ADediting_588043(16018761, +), ADediting_588044(16018768, +), ADediting_588045(16018769, +), ADediting_588046(16018770, +), ADediting_588047(16018771, +), ADediting_588048(16018782, +), ADediting_588049(16018788, +), ADediting_588050(16019071, +), ADediting_588051(16019078, +), ADediting_588052(16019083, +), ADediting_588053(16019092, +), ADediting_588054(16019095, +), ADediting_588055(16019113, +), ADediting_588056(16019118, +), ADediting_588057(16019123, +), ADediting_588058(16019132, +), ADediting_588059(16019134, +), ADediting_588060(16019156, +), ADediting_588061(16019157, +), ADediting_588062(16019212, +), ADediting_588063(16019213, +), ADediting_588064(16019219, +), ADediting_588065(16019222, +), ADediting_588066(16019239, +), ADediting_588067(16019253, +), ADediting_588068(16019254, +), ADediting_588069(16019259, +), ADediting_588070(16019265, +), ADediting_588071(16019274, +), ADediting_588072(16019283, +), ADediting_588073(16019298, +), ADediting_588074(16019315, +), ADediting_588075(16019855, +), ADediting_588076(16019865, +), ADediting_588077(16019871, +), ADediting_588078(16019872, +), ADediting_588079(16019877, +), ADediting_588080(16019888, +), ADediting_588081(16019894, +), ADediting_588082(16019898, +), ADediting_588083(16019917, +), ADediting_588084(16019928, +), ADediting_588085(16019991, +), ADediting_588086(16020003, +), ADediting_588087(16020009, +), ADediting_588088(16020010, +), ADediting_588089(16020015, +), ADediting_588090(16020016, +), ADediting_588091(16020019, +), ADediting_588092(16020049, +), ADediting_588093(16020051, +), ADediting_588094(16020063, +), ADediting_588095(16020073, +), ADediting_588096(16020688, +), ADediting_588097(16020692, +), ADediting_588098(16020693, +), ADediting_588099(16020723, +), ADediting_588100(16020732, +), ADediting_588101(16020742, +), ADediting_588102(16020747, +), ADediting_588103(16020758, +), ADediting_588104(16020759, +), ADediting_588105(16020772, +), ADediting_588106(16020773, +), ADediting_588107(16020785, +), ADediting_588108(16020790, +), ADediting_588109(16020803, +), ADediting_588110(16020806, +), ADediting_588111(16020812, +), ADediting_588112(16020814, +), ADediting_588113(16020818, +), ADediting_588114(16020873, +), ADediting_588115(16020878, +), ADediting_588116(16020888, +), ADediting_588117(16020922, +), ADediting_588118(16020923, +), ADediting_588119(16020940, +), ADediting_588120(16020949, +), ADediting_588121(16020950, +), ADediting_588122(16020953, +), ADediting_588123(16021071, +), ADediting_588124(16021116, +), ADediting_588125(16021133, +), ADediting_588126(16021155, +), ADediting_588127(16021267, +), ADediting_588128(16021284, +), ADediting_588129(16021290, +), ADediting_588130(16021294, +), ADediting_588131(16021297, +), ADediting_588132(16021308, +), ADediting_588133(16021329, +), ADediting_588134(16021372, +), ADediting_588135(16024360, +), ADediting_588136(16024370, +), ADediting_588137(16024376, +), ADediting_588138(16024382, +), ADediting_588139(16024425, +), ADediting_588140(16024435, +), ADediting_588141(16024437, +), ADediting_588142(16024504, +), ADediting_588143(16024512, +), ADediting_588144(16024516, +), ADediting_588145(16024527, +), ADediting_588146(16024548, +), ADediting_588147(16024567, +), ADediting_588148(16024579, +), ADediting_1545404(16002243, +), ADediting_1545405(16002280, +), ADediting_1545406(16010555, +), ADediting_1545407(16013100, +), ADediting_1545408(16018550, +), ADediting_1545409(16018672, +), ADediting_1545410(16018691, +), ADediting_1545411(16020753, +), ADediting_1545412(16021303, +), ADediting_1545415(16024490, +), ADediting_1625972(16006194, +), ADediting_1625973(16012225, +), ADediting_1625974(16018611, +), ADediting_1625975(16019175, +), ADediting_1625976(16019177, +),

Top

RNA editing positional annotations for TTC19 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_587881chr17_16002210_+intronic
ADediting_587882chr17_16002234_+intronic
ADediting_587883chr17_16002386_+intronic
ADediting_587884chr17_16002411_+intronic
ADediting_587885chr17_16002439_+intronic
ADediting_587886chr17_16006254_+intronic
ADediting_587887chr17_16010319_+intronic
ADediting_587888chr17_16010446_+intronic
ADediting_587889chr17_16010671_+intronic
ADediting_587890chr17_16010679_+intronic
ADediting_587891chr17_16010734_+intronic
ADediting_587892chr17_16011212_+intronic
ADediting_587893chr17_16011255_+intronic
ADediting_587894chr17_16011257_+intronic
ADediting_587895chr17_16011261_+intronic
ADediting_587896chr17_16011280_+intronic
ADediting_587897chr17_16011281_+intronic
ADediting_587898chr17_16011285_+intronic
ADediting_587899chr17_16011291_+intronic
ADediting_587900chr17_16011310_+intronic
ADediting_587901chr17_16011320_+intronic
ADediting_587902chr17_16011322_+intronic
ADediting_587903chr17_16011354_+intronic
ADediting_587904chr17_16011360_+intronic
ADediting_587905chr17_16011363_+intronic
ADediting_587906chr17_16011377_+intronic
ADediting_587907chr17_16011425_+intronic
ADediting_587908chr17_16011435_+intronic
ADediting_587909chr17_16011447_+intronic
ADediting_587910chr17_16012255_+intronic
ADediting_587911chr17_16012256_+intronic
ADediting_587912chr17_16012279_+intronic
ADediting_587913chr17_16012286_+intronic
ADediting_587914chr17_16012287_+intronic
ADediting_587915chr17_16012310_+intronic
ADediting_587916chr17_16012311_+intronic
ADediting_587917chr17_16012353_+intronic
ADediting_587918chr17_16012359_+intronic
ADediting_587919chr17_16012365_+intronic
ADediting_587920chr17_16012387_+intronic
ADediting_587921chr17_16012390_+intronic
ADediting_587922chr17_16012398_+intronic
ADediting_587923chr17_16012466_+intronic
ADediting_587924chr17_16012613_+intronic
ADediting_587925chr17_16012618_+intronic
ADediting_587926chr17_16012619_+intronic
ADediting_587927chr17_16012639_+intronic
ADediting_587928chr17_16012656_+intronic
ADediting_587929chr17_16012668_+intronic
ADediting_587930chr17_16012686_+intronic
ADediting_587931chr17_16012718_+intronic
ADediting_587932chr17_16012738_+intronic
ADediting_587933chr17_16012772_+intronic
ADediting_587934chr17_16012790_+intronic
ADediting_587935chr17_16012791_+intronic
ADediting_587936chr17_16012799_+intronic
ADediting_587937chr17_16012800_+intronic
ADediting_587938chr17_16012812_+intronic
ADediting_587939chr17_16012931_+intronic
ADediting_587940chr17_16012939_+intronic
ADediting_587941chr17_16012940_+intronic
ADediting_587942chr17_16012947_+intronic
ADediting_587943chr17_16012948_+intronic
ADediting_587944chr17_16012954_+intronic
ADediting_587945chr17_16012956_+intronic
ADediting_587946chr17_16012964_+intronic
ADediting_587947chr17_16012969_+intronic
ADediting_587948chr17_16012970_+intronic
ADediting_587949chr17_16012993_+intronic
ADediting_587950chr17_16013005_+intronic
ADediting_587951chr17_16013008_+intronic
ADediting_587952chr17_16013048_+intronic
ADediting_587953chr17_16013050_+intronic
ADediting_587954chr17_16013052_+intronic
ADediting_587955chr17_16013054_+intronic
ADediting_587956chr17_16013057_+intronic
ADediting_587957chr17_16013073_+intronic
ADediting_587958chr17_16013075_+intronic
ADediting_587959chr17_16013089_+intronic
ADediting_587960chr17_16013093_+intronic
ADediting_587961chr17_16013097_+intronic
ADediting_587962chr17_16013110_+intronic
ADediting_587963chr17_16013113_+intronic
ADediting_587964chr17_16013118_+intronic
ADediting_587965chr17_16013119_+intronic
ADediting_587966chr17_16013124_+intronic
ADediting_587967chr17_16013129_+intronic
ADediting_587968chr17_16013130_+intronic
ADediting_587969chr17_16013158_+intronic
ADediting_587970chr17_16013183_+intronic
ADediting_587971chr17_16016632_+intronic
ADediting_587972chr17_16016657_+intronic
ADediting_587973chr17_16016658_+intronic
ADediting_587974chr17_16016675_+intronic
ADediting_587975chr17_16016697_+intronic
ADediting_587976chr17_16016699_+intronic
ADediting_587977chr17_16016724_+intronic
ADediting_587978chr17_16016755_+intronic
ADediting_587979chr17_16016758_+intronic
ADediting_587980chr17_16016832_+intronic
ADediting_587981chr17_16016838_+intronic
ADediting_587982chr17_16016894_+intronic
ADediting_587983chr17_16016904_+intronic
ADediting_587984chr17_16016928_+intronic
ADediting_587985chr17_16016968_+intronic
ADediting_587986chr17_16016970_+intronic
ADediting_587987chr17_16017302_+intronic
ADediting_587988chr17_16017306_+intronic
ADediting_587989chr17_16017310_+intronic
ADediting_587990chr17_16017326_+intronic
ADediting_587991chr17_16017328_+intronic
ADediting_587992chr17_16017334_+intronic
ADediting_587993chr17_16017338_+intronic
ADediting_587994chr17_16017355_+intronic
ADediting_587995chr17_16017374_+intronic
ADediting_587996chr17_16017376_+intronic
ADediting_587997chr17_16017377_+intronic
ADediting_587998chr17_16017381_+intronic
ADediting_587999chr17_16017394_+intronic
ADediting_588000chr17_16017409_+intronic
ADediting_588001chr17_16017431_+intronic
ADediting_588002chr17_16017433_+intronic
ADediting_588003chr17_16017439_+intronic
ADediting_588004chr17_16017504_+intronic
ADediting_588005chr17_16017505_+intronic
ADediting_588006chr17_16017559_+intronic
ADediting_588007chr17_16017578_+intronic
ADediting_588008chr17_16017640_+intronic
ADediting_588009chr17_16017641_+intronic
ADediting_588010chr17_16017646_+intronic
ADediting_588011chr17_16017667_+intronic
ADediting_588012chr17_16017681_+intronic
ADediting_588013chr17_16017706_+intronic
ADediting_588014chr17_16017711_+intronic
ADediting_588015chr17_16017716_+intronic
ADediting_588016chr17_16017744_+intronic
ADediting_588017chr17_16018530_+intronic
ADediting_588018chr17_16018538_+intronic
ADediting_588019chr17_16018570_+intronic
ADediting_588020chr17_16018574_+intronic
ADediting_588021chr17_16018581_+intronic
ADediting_588022chr17_16018586_+intronic
ADediting_588023chr17_16018593_+intronic
ADediting_588024chr17_16018600_+intronic
ADediting_588025chr17_16018619_+intronic
ADediting_588026chr17_16018624_+intronic
ADediting_588027chr17_16018632_+intronic
ADediting_588028chr17_16018633_+intronic
ADediting_588029chr17_16018636_+intronic
ADediting_588030chr17_16018641_+intronic
ADediting_588031chr17_16018681_+intronic
ADediting_588032chr17_16018705_+intronic
ADediting_588033chr17_16018708_+intronic
ADediting_588034chr17_16018717_+intronic
ADediting_588035chr17_16018729_+intronic
ADediting_588036chr17_16018730_+intronic
ADediting_588037chr17_16018741_+intronic
ADediting_588038chr17_16018742_+intronic
ADediting_588039chr17_16018743_+intronic
ADediting_588040chr17_16018746_+intronic
ADediting_588041chr17_16018747_+intronic
ADediting_588042chr17_16018751_+intronic
ADediting_588043chr17_16018761_+intronic
ADediting_588044chr17_16018768_+intronic
ADediting_588045chr17_16018769_+intronic
ADediting_588046chr17_16018770_+intronic
ADediting_588047chr17_16018771_+intronic
ADediting_588048chr17_16018782_+intronic
ADediting_588049chr17_16018788_+intronic
ADediting_588050chr17_16019071_+intronic
ADediting_588051chr17_16019078_+intronic
ADediting_588052chr17_16019083_+intronic
ADediting_588053chr17_16019092_+intronic
ADediting_588054chr17_16019095_+intronic
ADediting_588055chr17_16019113_+intronic
ADediting_588056chr17_16019118_+intronic
ADediting_588057chr17_16019123_+intronic
ADediting_588058chr17_16019132_+intronic
ADediting_588059chr17_16019134_+intronic
ADediting_588060chr17_16019156_+intronic
ADediting_588061chr17_16019157_+intronic
ADediting_588062chr17_16019212_+intronic
ADediting_588063chr17_16019213_+intronic
ADediting_588064chr17_16019219_+intronic
ADediting_588065chr17_16019222_+intronic
ADediting_588066chr17_16019239_+intronic
ADediting_588067chr17_16019253_+intronic
ADediting_588068chr17_16019254_+intronic
ADediting_588069chr17_16019259_+intronic
ADediting_588070chr17_16019265_+intronic
ADediting_588071chr17_16019274_+intronic
ADediting_588072chr17_16019283_+intronic
ADediting_588073chr17_16019298_+intronic
ADediting_588074chr17_16019315_+intronic
ADediting_588075chr17_16019855_+intronic
ADediting_588076chr17_16019865_+intronic
ADediting_588077chr17_16019871_+intronic
ADediting_588078chr17_16019872_+intronic
ADediting_588079chr17_16019877_+intronic
ADediting_588080chr17_16019888_+intronic
ADediting_588081chr17_16019894_+intronic
ADediting_588082chr17_16019898_+intronic
ADediting_588083chr17_16019917_+intronic
ADediting_588084chr17_16019928_+intronic
ADediting_588085chr17_16019991_+intronic
ADediting_588086chr17_16020003_+intronic
ADediting_588087chr17_16020009_+intronic
ADediting_588088chr17_16020010_+intronic
ADediting_588089chr17_16020015_+intronic
ADediting_588090chr17_16020016_+intronic
ADediting_588091chr17_16020019_+intronic
ADediting_588092chr17_16020049_+intronic
ADediting_588093chr17_16020051_+intronic
ADediting_588094chr17_16020063_+intronic
ADediting_588095chr17_16020073_+intronic
ADediting_588096chr17_16020688_+intronic
ADediting_588097chr17_16020692_+intronic
ADediting_588098chr17_16020693_+intronic
ADediting_588099chr17_16020723_+intronic
ADediting_588100chr17_16020732_+intronic
ADediting_588101chr17_16020742_+intronic
ADediting_588102chr17_16020747_+intronic
ADediting_588103chr17_16020758_+intronic
ADediting_588104chr17_16020759_+intronic
ADediting_588105chr17_16020772_+intronic
ADediting_588106chr17_16020773_+intronic
ADediting_588107chr17_16020785_+intronic
ADediting_588108chr17_16020790_+intronic
ADediting_588109chr17_16020803_+intronic
ADediting_588110chr17_16020806_+intronic
ADediting_588111chr17_16020812_+intronic
ADediting_588112chr17_16020814_+intronic
ADediting_588113chr17_16020818_+intronic
ADediting_588114chr17_16020873_+intronic
ADediting_588115chr17_16020878_+intronic
ADediting_588116chr17_16020888_+intronic
ADediting_588117chr17_16020922_+intronic
ADediting_588118chr17_16020923_+intronic
ADediting_588119chr17_16020940_+intronic
ADediting_588120chr17_16020949_+intronic
ADediting_588121chr17_16020950_+intronic
ADediting_588122chr17_16020953_+intronic
ADediting_588123chr17_16021071_+intronic
ADediting_588124chr17_16021116_+intronic
ADediting_588125chr17_16021133_+intronic
ADediting_588126chr17_16021155_+intronic
ADediting_588127chr17_16021267_+intronic
ADediting_588128chr17_16021284_+intronic
ADediting_588129chr17_16021290_+intronic
ADediting_588130chr17_16021294_+intronic
ADediting_588131chr17_16021297_+intronic
ADediting_588132chr17_16021308_+intronic
ADediting_588133chr17_16021329_+intronic
ADediting_588134chr17_16021372_+intronic
ADediting_588135chr17_16024360_+intronic
ADediting_588136chr17_16024370_+intronic
ADediting_588137chr17_16024376_+intronic
ADediting_588138chr17_16024382_+intronic
ADediting_588139chr17_16024425_+intronic
ADediting_588140chr17_16024435_+intronic
ADediting_588141chr17_16024437_+intronic
ADediting_588142chr17_16024504_+intronic
ADediting_588143chr17_16024512_+intronic
ADediting_588144chr17_16024516_+intronic
ADediting_588145chr17_16024527_+intronic
ADediting_588146chr17_16024548_+intronic
ADediting_588147chr17_16024567_+intronic
ADediting_588148chr17_16024579_+intronic
ADediting_1545404chr17_16002243_+intronic
ADediting_1545405chr17_16002280_+intronic
ADediting_1545406chr17_16010555_+intronic
ADediting_1545407chr17_16013100_+intronic
ADediting_1545408chr17_16018550_+intronic
ADediting_1545409chr17_16018672_+intronic
ADediting_1545410chr17_16018691_+intronic
ADediting_1545411chr17_16020753_+intronic
ADediting_1545412chr17_16021303_+intronic
ADediting_1545415chr17_16024490_+intronic
ADediting_1625972chr17_16006194_+intronic
ADediting_1625973chr17_16012225_+intronic
ADediting_1625974chr17_16018611_+intronic
ADediting_1625975chr17_16019175_+intronic
ADediting_1625976chr17_16019177_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_587881chr17_16002210_+SINEAluName=AluSx
ADediting_587882chr17_16002234_+SINEAluName=AluSx
ADediting_587883chr17_16002386_+SINEAluName=AluSx
ADediting_587884chr17_16002411_+SINEAluName=AluSx
ADediting_587885chr17_16002439_+SINEAluName=AluSx
ADediting_587886chr17_16006254_+SINEAluName=AluSq2
ADediting_587887chr17_16010319_+SINEAluName=AluSc
ADediting_587888chr17_16010446_+SINEAluName=AluSc
ADediting_587889chr17_16010671_+SINEAluName=AluSc8
ADediting_587890chr17_16010679_+SINEAluName=AluSc8
ADediting_587891chr17_16010734_+SINEAluName=AluSc8
ADediting_587892chr17_16011212_+SINEAluName=AluSx
ADediting_587893chr17_16011255_+SINEAluName=AluSx
ADediting_587894chr17_16011257_+SINEAluName=AluSx
ADediting_587895chr17_16011261_+SINEAluName=AluSx
ADediting_587896chr17_16011280_+SINEAluName=AluSx
ADediting_587897chr17_16011281_+SINEAluName=AluSx
ADediting_587898chr17_16011285_+SINEAluName=AluSx
ADediting_587899chr17_16011291_+SINEAluName=AluSx
ADediting_587900chr17_16011310_+SINEAluName=AluSx
ADediting_587901chr17_16011320_+SINEAluName=AluSx
ADediting_587902chr17_16011322_+SINEAluName=AluSx
ADediting_587903chr17_16011354_+SINEAluName=AluSx
ADediting_587904chr17_16011360_+SINEAluName=AluSx
ADediting_587905chr17_16011363_+SINEAluName=AluSx
ADediting_587906chr17_16011377_+SINEAluName=AluSx
ADediting_587907chr17_16011425_+SINEAluName=AluSx
ADediting_587908chr17_16011435_+SINEAluName=AluSx
ADediting_587909chr17_16011447_+SINEAluName=AluSx
ADediting_587910chr17_16012255_+SINEAluName=AluSz6
ADediting_587911chr17_16012256_+SINEAluName=AluSz6
ADediting_587912chr17_16012279_+SINEAluName=AluSz6
ADediting_587913chr17_16012286_+SINEAluName=AluSz6
ADediting_587914chr17_16012287_+SINEAluName=AluSz6
ADediting_587915chr17_16012310_+SINEAluName=AluSz6
ADediting_587916chr17_16012311_+SINEAluName=AluSz6
ADediting_587917chr17_16012353_+SINEAluName=AluSz6
ADediting_587918chr17_16012359_+SINEAluName=AluSz6
ADediting_587919chr17_16012365_+SINEAluName=AluSz6
ADediting_587920chr17_16012387_+SINEAluName=AluSz6
ADediting_587921chr17_16012390_+SINEAluName=AluSz6
ADediting_587922chr17_16012398_+SINEAluName=AluSz6
ADediting_587923chr17_16012466_+SINEAluName=AluSz6
ADediting_587924chr17_16012613_+SINEAluName=AluSp
ADediting_587925chr17_16012618_+SINEAluName=AluSp
ADediting_587926chr17_16012619_+SINEAluName=AluSp
ADediting_587927chr17_16012639_+SINEAluName=AluSp
ADediting_587928chr17_16012656_+SINEAluName=AluSp
ADediting_587929chr17_16012668_+SINEAluName=AluSp
ADediting_587930chr17_16012686_+SINEAluName=AluSp
ADediting_587931chr17_16012718_+SINEAluName=AluSp
ADediting_587932chr17_16012738_+SINEAluName=AluSp
ADediting_587933chr17_16012772_+SINEAluName=AluSp
ADediting_587934chr17_16012790_+SINEAluName=AluSp
ADediting_587935chr17_16012791_+SINEAluName=AluSp
ADediting_587936chr17_16012799_+SINEAluName=AluSp
ADediting_587937chr17_16012800_+SINEAluName=AluSp
ADediting_587938chr17_16012812_+SINEAluName=AluSp
ADediting_587939chr17_16012931_+SINEAluName=AluJo
ADediting_587940chr17_16012939_+SINEAluName=AluJo
ADediting_587941chr17_16012940_+SINEAluName=AluJo
ADediting_587942chr17_16012947_+SINEAluName=AluJo
ADediting_587943chr17_16012948_+SINEAluName=AluJo
ADediting_587944chr17_16012954_+SINEAluName=AluJo
ADediting_587945chr17_16012956_+SINEAluName=AluJo
ADediting_587946chr17_16012964_+SINEAluName=AluJo
ADediting_587947chr17_16012969_+SINEAluName=AluJo
ADediting_587948chr17_16012970_+SINEAluName=AluJo
ADediting_587949chr17_16012993_+SINEAluName=AluJo
ADediting_587950chr17_16013005_+SINEAluName=AluJo
ADediting_587951chr17_16013008_+SINEAluName=AluJo
ADediting_587952chr17_16013048_+SINEAluName=AluJo
ADediting_587953chr17_16013050_+SINEAluName=AluJo
ADediting_587954chr17_16013052_+SINEAluName=AluJo
ADediting_587955chr17_16013054_+SINEAluName=AluJo
ADediting_587956chr17_16013057_+SINEAluName=AluJo
ADediting_587957chr17_16013073_+SINEAluName=AluJo
ADediting_587958chr17_16013075_+SINEAluName=AluJo
ADediting_587959chr17_16013089_+SINEAluName=AluJo
ADediting_587960chr17_16013093_+SINEAluName=AluJo
ADediting_587961chr17_16013097_+SINEAluName=AluJo
ADediting_587962chr17_16013110_+SINEAluName=AluJo
ADediting_587963chr17_16013113_+SINEAluName=AluJo
ADediting_587964chr17_16013118_+SINEAluName=AluJo
ADediting_587965chr17_16013119_+SINEAluName=AluJo
ADediting_587966chr17_16013124_+SINEAluName=AluJo
ADediting_587967chr17_16013129_+SINEAluName=AluJo
ADediting_587968chr17_16013130_+SINEAluName=AluJo
ADediting_587969chr17_16013158_+SINEAluName=AluJo
ADediting_587970chr17_16013183_+SINEAluName=AluJo
ADediting_587971chr17_16016632_+SINEAluName=AluSx
ADediting_587972chr17_16016657_+SINEAluName=AluSx
ADediting_587973chr17_16016658_+SINEAluName=AluSx
ADediting_587974chr17_16016675_+SINEAluName=AluSx
ADediting_587975chr17_16016697_+SINEAluName=AluSx
ADediting_587976chr17_16016699_+SINEAluName=AluSx
ADediting_587977chr17_16016724_+SINEAluName=AluSx
ADediting_587978chr17_16016755_+SINEAluName=AluSx
ADediting_587979chr17_16016758_+SINEAluName=AluSx
ADediting_587980chr17_16016832_+SINEAluName=AluSx
ADediting_587981chr17_16016838_+SINEAluName=AluSx
ADediting_587982chr17_16016894_+SINEAluName=AluSx
ADediting_587983chr17_16016904_+SINEAluName=AluSx
ADediting_587984chr17_16016928_+SINEAluName=AluSx
ADediting_587985chr17_16016968_+SINEAluName=AluSx
ADediting_587986chr17_16016970_+SINEAluName=AluSx
ADediting_587987chr17_16017302_+SINEAluName=AluYh3
ADediting_587988chr17_16017306_+SINEAluName=AluYh3
ADediting_587989chr17_16017310_+SINEAluName=AluYh3
ADediting_587990chr17_16017326_+SINEAluName=AluYh3
ADediting_587991chr17_16017328_+SINEAluName=AluYh3
ADediting_587992chr17_16017334_+SINEAluName=AluYh3
ADediting_587993chr17_16017338_+SINEAluName=AluYh3
ADediting_587994chr17_16017355_+SINEAluName=AluYh3
ADediting_587995chr17_16017374_+SINEAluName=AluYh3
ADediting_587996chr17_16017376_+SINEAluName=AluYh3
ADediting_587997chr17_16017377_+SINEAluName=AluYh3
ADediting_587998chr17_16017381_+SINEAluName=AluYh3
ADediting_587999chr17_16017394_+SINEAluName=AluYh3
ADediting_588000chr17_16017409_+SINEAluName=AluYh3
ADediting_588001chr17_16017431_+SINEAluName=AluYh3
ADediting_588002chr17_16017433_+SINEAluName=AluYh3
ADediting_588003chr17_16017439_+SINEAluName=AluYh3
ADediting_588004chr17_16017504_+SINEAluName=AluSq2
ADediting_588005chr17_16017505_+SINEAluName=AluSq2
ADediting_588006chr17_16017559_+SINEAluName=AluSq2
ADediting_588007chr17_16017578_+SINEAluName=AluSq2
ADediting_588008chr17_16017640_+SINEAluName=AluSq2
ADediting_588009chr17_16017641_+SINEAluName=AluSq2
ADediting_588010chr17_16017646_+SINEAluName=AluSq2
ADediting_588011chr17_16017667_+SINEAluName=AluSq2
ADediting_588012chr17_16017681_+SINEAluName=AluSq2
ADediting_588013chr17_16017706_+SINEAluName=AluSq2
ADediting_588014chr17_16017711_+SINEAluName=AluSq2
ADediting_588015chr17_16017716_+SINEAluName=AluSq2
ADediting_588016chr17_16017744_+SINEAluName=AluSq2
ADediting_588017chr17_16018530_+SINEAluName=AluJb
ADediting_588018chr17_16018538_+SINEAluName=AluJb
ADediting_588019chr17_16018570_+SINEAluName=AluJb
ADediting_588020chr17_16018574_+SINEAluName=AluJb
ADediting_588021chr17_16018581_+SINEAluName=AluJb
ADediting_588022chr17_16018586_+SINEAluName=AluJb
ADediting_588023chr17_16018593_+SINEAluName=AluJb
ADediting_588024chr17_16018600_+SINEAluName=AluJb
ADediting_588025chr17_16018619_+SINEAluName=AluJb
ADediting_588026chr17_16018624_+SINEAluName=AluJb
ADediting_588027chr17_16018632_+SINEAluName=AluJb
ADediting_588028chr17_16018633_+SINEAluName=AluJb
ADediting_588029chr17_16018636_+SINEAluName=AluJb
ADediting_588030chr17_16018641_+SINEAluName=AluJb
ADediting_588031chr17_16018681_+SINEAluName=AluJb
ADediting_588032chr17_16018705_+SINEAluName=AluJb
ADediting_588033chr17_16018708_+SINEAluName=AluJb
ADediting_588034chr17_16018717_+SINEAluName=AluJb
ADediting_588035chr17_16018729_+SINEAluName=AluJb
ADediting_588036chr17_16018730_+SINEAluName=AluJb
ADediting_588037chr17_16018741_+SINEAluName=AluJb
ADediting_588038chr17_16018742_+SINEAluName=AluJb
ADediting_588039chr17_16018743_+SINEAluName=AluJb
ADediting_588040chr17_16018746_+SINEAluName=AluJb
ADediting_588041chr17_16018747_+SINEAluName=AluJb
ADediting_588042chr17_16018751_+SINEAluName=AluJb
ADediting_588043chr17_16018761_+SINEAluName=AluJb
ADediting_588044chr17_16018768_+SINEAluName=AluJb
ADediting_588045chr17_16018769_+SINEAluName=AluJb
ADediting_588046chr17_16018770_+SINEAluName=AluJb
ADediting_588047chr17_16018771_+SINEAluName=AluJb
ADediting_588048chr17_16018782_+SINEAluName=AluJb
ADediting_588049chr17_16018788_+SINEAluName=AluJb
ADediting_588050chr17_16019071_+SINEAluName=AluSx1
ADediting_588051chr17_16019078_+SINEAluName=AluSx1
ADediting_588052chr17_16019083_+SINEAluName=AluSx1
ADediting_588053chr17_16019092_+SINEAluName=AluSx1
ADediting_588054chr17_16019095_+SINEAluName=AluSx1
ADediting_588055chr17_16019113_+SINEAluName=AluSx1
ADediting_588056chr17_16019118_+SINEAluName=AluSx1
ADediting_588057chr17_16019123_+SINEAluName=AluSx1
ADediting_588058chr17_16019132_+SINEAluName=AluSx1
ADediting_588059chr17_16019134_+SINEAluName=AluSx1
ADediting_588060chr17_16019156_+SINEAluName=AluSx1
ADediting_588061chr17_16019157_+SINEAluName=AluSx1
ADediting_588062chr17_16019212_+SINEAluName=AluSx1
ADediting_588063chr17_16019213_+SINEAluName=AluSx1
ADediting_588064chr17_16019219_+SINEAluName=AluSx1
ADediting_588065chr17_16019222_+SINEAluName=AluSx1
ADediting_588066chr17_16019239_+SINEAluName=AluSx1
ADediting_588067chr17_16019253_+SINEAluName=AluSx1
ADediting_588068chr17_16019254_+SINEAluName=AluSx1
ADediting_588069chr17_16019259_+SINEAluName=AluSx1
ADediting_588070chr17_16019265_+SINEAluName=AluSx1
ADediting_588071chr17_16019274_+SINEAluName=AluSx1
ADediting_588072chr17_16019283_+SINEAluName=AluSx1
ADediting_588073chr17_16019298_+SINEAluName=AluSx1
ADediting_588074chr17_16019315_+SINEAluName=AluSx1
ADediting_588075chr17_16019855_+SINEAluName=AluSx1
ADediting_588076chr17_16019865_+SINEAluName=AluSx1
ADediting_588077chr17_16019871_+SINEAluName=AluSx1
ADediting_588078chr17_16019872_+SINEAluName=AluSx1
ADediting_588079chr17_16019877_+SINEAluName=AluSx1
ADediting_588080chr17_16019888_+SINEAluName=AluSx1
ADediting_588081chr17_16019894_+SINEAluName=AluSx1
ADediting_588082chr17_16019898_+SINEAluName=AluSx1
ADediting_588083chr17_16019917_+SINEAluName=AluSx1
ADediting_588084chr17_16019928_+SINEAluName=AluSx1
ADediting_588085chr17_16019991_+SINEAluName=AluSx1
ADediting_588086chr17_16020003_+SINEAluName=AluSx1
ADediting_588087chr17_16020009_+SINEAluName=AluSx1
ADediting_588088chr17_16020010_+SINEAluName=AluSx1
ADediting_588089chr17_16020015_+SINEAluName=AluSx1
ADediting_588090chr17_16020016_+SINEAluName=AluSx1
ADediting_588091chr17_16020019_+SINEAluName=AluSx1
ADediting_588092chr17_16020049_+SINEAluName=AluSx1
ADediting_588093chr17_16020051_+SINEAluName=AluSx1
ADediting_588094chr17_16020063_+SINEAluName=AluSx1
ADediting_588095chr17_16020073_+SINEAluName=AluSx1
ADediting_588096chr17_16020688_+SINEAluName=AluJr
ADediting_588097chr17_16020692_+SINEAluName=AluJr
ADediting_588098chr17_16020693_+SINEAluName=AluJr
ADediting_588099chr17_16020723_+SINEAluName=AluJr
ADediting_588100chr17_16020732_+SINEAluName=AluJr
ADediting_588101chr17_16020742_+SINEAluName=AluJr
ADediting_588102chr17_16020747_+SINEAluName=AluJr
ADediting_588103chr17_16020758_+SINEAluName=AluJr
ADediting_588104chr17_16020759_+SINEAluName=AluJr
ADediting_588105chr17_16020772_+SINEAluName=AluJr
ADediting_588106chr17_16020773_+SINEAluName=AluJr
ADediting_588107chr17_16020785_+SINEAluName=AluJr
ADediting_588108chr17_16020790_+SINEAluName=AluJr
ADediting_588109chr17_16020803_+SINEAluName=AluJr
ADediting_588110chr17_16020806_+SINEAluName=AluJr
ADediting_588111chr17_16020812_+SINEAluName=AluJr
ADediting_588112chr17_16020814_+SINEAluName=AluJr
ADediting_588113chr17_16020818_+SINEAluName=AluJr
ADediting_588114chr17_16020873_+SINEAluName=AluJr
ADediting_588115chr17_16020878_+SINEAluName=AluJr
ADediting_588116chr17_16020888_+SINEAluName=AluJr
ADediting_588117chr17_16020922_+SINEAluName=AluJr
ADediting_588118chr17_16020923_+SINEAluName=AluJr
ADediting_588119chr17_16020940_+SINEAluName=AluJr
ADediting_588120chr17_16020949_+SINEAluName=AluJr
ADediting_588121chr17_16020950_+SINEAluName=AluJr
ADediting_588122chr17_16020953_+SINEAluName=AluJr
ADediting_588123chr17_16021071_+LINEL2Name=L2a
ADediting_588124chr17_16021116_+SINEAluName=AluSx4
ADediting_588125chr17_16021133_+SINEAluName=AluSx4
ADediting_588126chr17_16021155_+SINEAluName=AluSx4
ADediting_588127chr17_16021267_+SINEAluName=AluSx4
ADediting_588128chr17_16021284_+SINEAluName=AluSx4
ADediting_588129chr17_16021290_+SINEAluName=AluSx4
ADediting_588130chr17_16021294_+SINEAluName=AluSx4
ADediting_588131chr17_16021297_+SINEAluName=AluSx4
ADediting_588132chr17_16021308_+SINEAluName=AluSx4
ADediting_588133chr17_16021329_+SINEAluName=AluSx4
ADediting_588134chr17_16021372_+SINEAluName=AluSx4
ADediting_588135chr17_16024360_+SINEAluName=AluY
ADediting_588136chr17_16024370_+SINEAluName=AluY
ADediting_588137chr17_16024376_+SINEAluName=AluY
ADediting_588138chr17_16024382_+SINEAluName=AluY
ADediting_588139chr17_16024425_+SINEAluName=AluY
ADediting_588140chr17_16024435_+SINEAluName=AluY
ADediting_588141chr17_16024437_+SINEAluName=AluY
ADediting_588142chr17_16024504_+SINEAluName=AluY
ADediting_588143chr17_16024512_+SINEAluName=AluY
ADediting_588144chr17_16024516_+SINEAluName=AluY
ADediting_588145chr17_16024527_+SINEAluName=AluY
ADediting_588146chr17_16024548_+SINEAluName=AluY
ADediting_588147chr17_16024567_+SINEAluName=AluY
ADediting_588148chr17_16024579_+SINEAluName=AluY
ADediting_1545404chr17_16002243_+SINEAluName=AluSx
ADediting_1545405chr17_16002280_+SINEAluName=AluSx
ADediting_1545406chr17_16010555_+SINEAluName=AluSc8
ADediting_1545407chr17_16013100_+SINEAluName=AluJo
ADediting_1545408chr17_16018550_+SINEAluName=AluJb
ADediting_1545409chr17_16018672_+SINEAluName=AluJb
ADediting_1545410chr17_16018691_+SINEAluName=AluJb
ADediting_1545411chr17_16020753_+SINEAluName=AluJr
ADediting_1545412chr17_16021303_+SINEAluName=AluSx4
ADediting_1545415chr17_16024490_+SINEAluName=AluY
ADediting_1625972chr17_16006194_+SINEAluName=AluSq2
ADediting_1625973chr17_16012225_+SINEAluName=AluSz6
ADediting_1625974chr17_16018611_+SINEAluName=AluJb
ADediting_1625975chr17_16019175_+SINEAluName=AluSx1
ADediting_1625976chr17_16019177_+SINEAluName=AluSx1

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RNA A-to-I editing events in the alternative splicing sites for TTC19

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
A3SSADediting_1545415chr17_16024490_+16024472:160244943ss2iTTTTTTTGTATTTTTAGTAGAGA4.02TTTTTTTGTATTTTTAGTGGAGA-3.93
ESADediting_1545415chr17_16024490_+16024472:160244943ss2iTTTTTTTGTATTTTTAGTAGAGA4.02TTTTTTTGTATTTTTAGTGGAGA-3.93
ESADediting_1545415chr17_16024490_+16024469:160244913ss2eTTTTTTTTTTGTATTTTTAGTAG7.28TTTTTTTTTTGTATTTTTAGTGG8.61

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TTC19

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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Soverview

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for TTC19

check button- Lollipop plot for RNA A-to-I editings across protein structure.
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The effects of the RNA editing to the miRNA binding sites for TTC19

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1545415chr17_16024490_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-181a-2-3pchr1716006565160244928mer-1a1600655016024492148-19.01
ADediting_1545415chr17_16024490_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-6509-3pchr1716006566160244927mer-m81600655316024493148-14.35
ADediting_588143chr17_16024512_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-3190-5pchr1716024511160245177mer-m81602449916024518147-18.34
ADediting_588143chr17_16024512_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-548schr1716024510160245167mer-m81602449616024517143-12.53
ADediting_588146chr17_16024548_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-4767chr1716024547160245537mer-m81602453216024554140-18.13
ADediting_588147chr17_16024567_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-3189-3pchr1716024562160245687mer-m81602454616024569153-24.71
ADediting_588147chr17_16024567_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-6813-3pchr1716024563160245697mer-m81602455016024570140-12.55
ADediting_588148chr17_16024579_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-4705chr1716024573160245797mer-m81602456116024580146-10.89

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_588143chr17_16024512_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-4794chr1716024511160245177mer-m81602449616024518151-18.19
ADediting_588143chr17_16024512_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-664a-5pchr1716024511160245177mer-m81602449516024518141-15.8
ADediting_588144chr17_16024516_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-4793-5pchr1716024515160245217mer-m81602449916024522154-18.88
ADediting_588144chr17_16024516_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-4794chr1716024511160245177mer-m81602449616024518151-18.19
ADediting_588144chr17_16024516_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-664a-5pchr1716024511160245177mer-m81602449516024518141-15.8
ADediting_588145chr17_16024527_+ENSG00000011295.16ENST00000497842.6TTC19-208hsa-miR-5186chr1716024526160245327mer-m81602451316024533147-15.89

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1471003chr9_63819626_+ENSG00000011295.16ENST00000261647.10TTC19-201hsa-miR-4477bchr1716027635160276417mer-m81602762216027642156-15.88
ADediting_1631458chr19_40282624_-ENSG00000011295.16ENST00000470649.1TTC19-205hsa-miR-641chr1716044620160446267mer-m81604460416044627151-14.81
ADediting_496066chr15_66496985_-ENSG00000011295.16ENST00000261647.10TTC19-201hsa-miR-4512chr1716028325160283317mer-m81602831016028332145-19.45
ADediting_98288chr1_32086990_+ENSG00000011295.16ENST00000470649.1TTC19-205hsa-miR-5585-3pchr1716044649160446557mer-m81604463416044656148-19.53

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1337757chr7_5495852_-ENSG00000011295.16ENST00000261647.10TTC19-201hsa-miR-589-3pchr1716028309160283168mer-1a1602829416028316141-17.22
ADediting_843620chr2_207754818_+ENSG00000011295.16ENST00000261647.10TTC19-201hsa-miR-4775chr1716029080160290878mer-1a1602906616029087152-12.91

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TTC19

check button - RNA A-to-I editing in mRNA.
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ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000497842.6lncRNASoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_1545415ENST00000497842.6chr17_16024490_+788-534.60-534.30-541.60
ADediting_588142ENST00000497842.6chr17_16024504_+802-534.30-534.30-541.60
ADediting_588143ENST00000497842.6chr17_16024512_+810-533.80-534.30-541.60
ADediting_588144ENST00000497842.6chr17_16024516_+814-535.50-534.30-541.60
ADediting_588145ENST00000497842.6chr17_16024527_+825-535.80-534.30-541.60
ADediting_588146ENST00000497842.6chr17_16024548_+846-537.40-534.30-541.60
ADediting_588147ENST00000497842.6chr17_16024567_+865-535.10-534.30-541.60
ADediting_588148ENST00000497842.6chr17_16024579_+877-534.50-534.30-541.60

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Relation with ADAR for TTC19

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
CERADediting_587901chr17_16011320_+0.01797634374260870.1929863342241560.0001520798700371030.3044333142073080.001470303121214360.25744726789368
DLPFCADediting_587906chr17_16011377_+0.06027489376194640.1068333921282990.398181816470602-0.04815223713516896.24599849169642e-080.301399761615391
DLPFCADediting_587912chr17_16012279_+0.02458013884244030.1276671738590290.8034714927864740.01419073625782531.96889469481537e-090.33240088377396
DLPFCADediting_587918chr17_16012359_+0.09776624928968440.09421333820386180.49218909968604-0.03915259822340718.36507266331416e-140.407093072161744
DLPFCADediting_587921chr17_16012390_+0.006715121358775190.1536600378089950.5058913590281250.03792320058595938.36573531140408e-150.421808728969235
STGADediting_587934chr17_16012790_+0.02926611068564250.237982225242090.0004767012436610170.3729141548557810.245258348211079-0.128175277478983
DLPFCADediting_588017chr17_16018530_+1.75419270132469e-110.3698292440836073.22190806358597e-080.3076177349764120.001604190684638130.178480145408248
CERADediting_588017chr17_16018530_+0.0001025565477550260.3118282923696490.02075644172034640.1886847294386330.391418114701611-0.0704802360839258
DLPFCADediting_588024chr17_16018600_+2.30984820721212e-100.3500037028622028.84119880017383e-090.3193639712883410.001555168017880830.178983436943659
CERADediting_588025chr17_16018619_+0.0001878704239778390.3003841993203040.00365906603095460.2359012046693290.595413541588738-0.0437014459659198
STGADediting_588025chr17_16018619_+5.66906969922568e-050.424671782990260.01096944507406640.2762530509975310.1515343515873640.157859083316886
DLPFCADediting_588027chr17_16018632_+9.10040038512456e-110.3573264413214226.50912981175476e-070.2781163165753820.003170174947685270.167085870719103
CERADediting_588027chr17_16018632_+0.0001155346153178560.3096123228960170.0008028112616071490.2708084152343980.8950131941905690.0108653471897634
DLPFCADediting_588038chr17_16018742_+1.19654051854954e-110.3726589284572293.32847716342517e-100.3470793410748310.003012009143892020.167966352326901
DLPFCADediting_588046chr17_16018770_+1.28075166324741e-080.3160493424239043.50293715922792e-070.284478176493440.005900687045312570.156045417909325
DLPFCADediting_588047chr17_16018771_+6.5091538792159e-090.3220725655410515.19615201922618e-070.280447885587230.001682894068181790.177700865574108
CERADediting_588047chr17_16018771_+1.9246315786232e-050.3412487877153970.001025840199045960.2654774481110330.5641966248449870.0474511913162504
STGADediting_588047chr17_16018771_+0.001868679362831930.3345439918625670.04327977926753320.2210851320323460.932942754137838-0.00932020677662058
DLPFCADediting_588049chr17_16018788_+1.15450546991727e-090.3368902006519777.99386409574294e-090.3202581035706780.7889798507764540.0152614459682787
DLPFCADediting_588050chr17_16019071_+4.35967851745546e-080.3047950109679142.47448655036305e-050.2370510335440380.007315945375487680.152061048649301
DLPFCADediting_588052chr17_16019083_+8.79781429769282e-090.3194076965862872.74741512075555e-050.2357587147371770.000248246891062790.206688181805515
CERADediting_588053chr17_16019092_+0.0001863717565462150.3005387249092540.002329900747731660.246798052249630.2988406171402280.0853869644267231
DLPFCADediting_588054chr17_16019095_+3.57814705855149e-080.3066422785165771.79273240096048e-060.2673561972354750.0149487185466230.138115176074226
CERADediting_588054chr17_16019095_+3.44121968507138e-050.3313684385595440.002981603161626240.240903038306530.7131297688025230.0302652892334728
DLPFCADediting_588063chr17_16019213_+9.15968327245846e-050.2203310920107960.04608705726098570.1133778780632344.61787919136738e-080.304254579650546
DLPFCADediting_588068chr17_16019254_+0.01028123826321670.1455626713438460.887191081073954-0.008089619560729551.36906235347443e-100.354138896417865
CERADediting_588088chr17_16020010_+0.0001480869026098820.3049389075289320.0007694150314692240.2717215127593930.029542807158090.17775276843445
CERADediting_588092chr17_16020049_+4.32096792102214e-060.3652172902415491.55032943123653e-060.3806130963985770.4494998691932550.0622080408669273
CERADediting_588094chr17_16020063_+0.0001191113253242640.3090425026443270.0001635206405709190.3030503125699580.2678113265484780.0910509718378855
CERADediting_588098chr17_16020693_+1.79410094835258e-050.3424204905253410.0003513304285235440.2880303875312280.5754421180758760.0460895245292614
DLPFCADediting_588103chr17_16020758_+8.97452500594133e-050.2206017951703670.06844771245342580.1036252281218721.31971460934489e-100.354426884203562
CERADediting_588104chr17_16020759_+4.27911098686984e-050.3275742917323080.0004374483995814250.2835681058269420.1778915253624980.110591986118333
CERADediting_588107chr17_16020785_+7.22989869248878e-050.3182312338520123.80803194004663e-050.3296111800892260.6760847803358130.0343917919942761
CERADediting_588110chr17_16020806_+2.73193798720363e-070.4050238416322922.54618021698295e-050.3365323048450480.981639463836913-0.00189489863994742
CERADediting_588116chr17_16020888_+8.77388003761744e-050.3147042623455960.0001206477559737990.3088026169082190.7382034634530250.0275150484243045
CERADediting_588122chr17_16020953_+1.9671281943351e-060.3771063936035211.5564786309573e-070.4125334305123250.4806724958700610.0580179002925681
TCXADediting_588122chr17_16020953_+0.02740164662886640.1801296435907171.31430087663199e-050.3475566571143030.8562695016767150.014912719803943
DLPFCADediting_588123chr17_16021071_+0.0001736786508455460.2116758348349410.0144519000699360.138801497419853.36978520000758e-080.307200765085247
CERADediting_588126chr17_16021155_+0.0008773223808935370.2688908101648421.21864471462508e-050.3487903588891990.7678860504412890.0242978790267671
DLPFCADediting_588135chr17_16024360_+1.55522516130112e-090.3343933481495591.20563378973341e-070.2950742944738920.7682466161325980.0168027818116094
DLPFCADediting_588138chr17_16024382_+1.23607026710419e-060.2713589187515332.44315154102657e-080.310174387539730.1006987812737340.0934029491367699
DLPFCADediting_588143chr17_16024512_+1.47909781065633e-090.3348154998504176.96723887523615e-120.376612591589590.01391606081438790.139565333903285
CERADediting_588143chr17_16024512_+1.47520564930372e-100.4929249115234272.14892381551452e-090.4644004993212880.01710204291635250.194458569834296
CERADediting_588144chr17_16024516_+3.19545741562245e-080.4327344994304365.83026685437613e-090.4530647272244380.1485903856047410.118520594378691
TCXADediting_588148chr17_16024579_+0.06199760699297840.1527660742046820.0001151760338697770.3096703549835430.280278128621184-0.088724943157608

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC2.3773002723343e-390.6548842980456436.45994408796243e-210.4989255012784891.73316979704458e-150.431471184022345
AC4.04832007227058e-900.8974353523698571.88624139660718e-590.8101450062028686.63991361214278e-140.450597666281737
PCC2.44164801229845e-590.8679154684479571.74597481424463e-520.8417384816723820.01682621553849340.172800395992911
CER5.26733338226407e-330.7881509408054244.72895909130909e-170.6161904612325830.1918418195843950.107154339908987
TCX4.69751750515757e-360.8095398996765749.7624552230787e-270.7348659659284660.323794121524689-0.081108672632109
FP1.74360539255869e-280.7088902300882111.27862207999706e-260.6912231093452190.1228545987066920.116071900166408
IFG0.002844348410670890.5714677014550560.0457964741666070.4029632682302490.287871821001165-0.221238827097389
PG6.63540012705643e-600.8751210538928942.99772130464512e-470.8238860445830760.359509248800979-0.067565083961903
STG3.91813812779131e-310.8989542928445386.65174476718905e-180.7733376263232070.5065864679413170.0734688653321336

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Relation with AD stages for TTC19

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_588143chr17_16024512_+0.0003077242083138980.340760378388633
CERADediting_588144chr17_16024516_+0.0001930808203231810.351301655356147
TCXADediting_588047chr17_16018771_+0.001671420157279080.301719157885295
IFGADediting_587912chr17_16012279_+0.03547133699799280.422303326441651
IFGADediting_587941chr17_16012940_+0.01130599370490140.497952103823781
IFGADediting_587947chr17_16012969_+0.01130599370490140.497952103823781
IFGADediting_587959chr17_16013089_+0.03547133699799280.422303326441651
IFGADediting_587960chr17_16013093_+0.01130599370490140.497952103823781
IFGADediting_588017chr17_16018530_+0.03547133699799280.422303326441651
IFGADediting_588027chr17_16018632_+0.04897706951583-0.397704204776515
IFGADediting_588038chr17_16018742_+0.03547133699799280.422303326441651
IFGADediting_588058chr17_16019132_+0.03547133699799280.422303326441651
PGADediting_587960chr17_16013093_+3.6057690438122e-06-0.332240709651326
PGADediting_587961chr17_16013097_+1.01815821449666e-05-0.317333196861404
STGADediting_588122chr17_16020953_+0.0007330680886021270.361332512982928

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.

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RelatedDrugs for TTC19

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TTC19

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
TTC19C0021359Infertility1CTD_human
TTC19C0027765nervous system disorder1CTD_human
TTC19C0231686Gait, Unsteady1CTD_human
TTC19C0231687Spastic gait1CTD_human
TTC19C0231688Gait, Shuffling1CTD_human
TTC19C0231689Gait, Athetotic1CTD_human
TTC19C0231693Charcot Gait1CTD_human
TTC19C0231694Gait, Festinating1CTD_human
TTC19C0231695Cerebellar ataxic gait1CTD_human
TTC19C0231696Gait, Hemiplegic1CTD_human
TTC19C0231698Gait, Scissors1CTD_human
TTC19C0231712Waddling gait1CTD_human
TTC19C0234996Gait, Rigid1CTD_human
TTC19C0235000Gait, Broadened1CTD_human
TTC19C0270715Degenerative Diseases, Central Nervous System1CTD_human
TTC19C0337210Gait, Stumbling1CTD_human
TTC19C0427128Rapid Fatigue of Gait1CTD_human
TTC19C0427149Gait, Drop Foot1CTD_human
TTC19C0427169Marche a Petit Pas1CTD_human
TTC19C0427177Gait, Hysterical1CTD_human
TTC19C0524851Neurodegenerative Disorders1CTD_human
TTC19C0729353Subfertility1CTD_human
TTC19C0751733Degenerative Diseases, Spinal Cord1CTD_human
TTC19C0751829Gait Disorder, Sensorimotor1CTD_human
TTC19C0751830Gait Disorders, Neurologic1CTD_human
TTC19C0751831Gait, Frontal1CTD_human
TTC19C0751832Gait, Widebased1CTD_human
TTC19C4074771Sterility, Reproductive1CTD_human