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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SLC66A1 |
 Gene summary |
| Gene information | Gene symbol | SLC66A1 | Gene ID | 54896 |
| Gene name | solute carrier family 66 member 1 | |
| Synonyms | LAAT-1|LAAT1|PQLC2 | |
| Cytomap | 1p36.13 | |
| Type of gene | protein-coding | |
| Description | lysosomal amino acid transporter 1 homologPQ loop repeat containing 2PQ-loop repeat-containing protein 2 | |
| Modification date | 20200314 | |
| UniProtAcc | Q6ZP29, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| SLC66A1 | GO:0015809 | arginine transport | 22822152 |
| SLC66A1 | GO:0015819 | lysine transport | 22822152 |
| SLC66A1 | GO:0080144 | amino acid homeostasis | 22822152 |
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RNA A-to-I events for SLC66A1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_53148(19319750, +), ADediting_53149(19319756, +), ADediting_53150(19319788, +), ADediting_53153(19323590, +), ADediting_53158(19329001, +), ADediting_53159(19329002, +), ADediting_53160(19329025, +), ADediting_53161(19329056, +), ADediting_53162(19329071, +), ADediting_53163(19329079, +), ADediting_53164(19329080, +), ADediting_53165(19329081, +), ADediting_53166(19329086, +), ADediting_53167(19329092, +), ADediting_53168(19329096, +), ADediting_53169(19329097, +), ADediting_53170(19329101, +), ADediting_53171(19329104, +), ADediting_53172(19329106, +), ADediting_53173(19329110, +), ADediting_53174(19329114, +), ADediting_53175(19329126, +), ADediting_53176(19329136, +), ADediting_53177(19329142, +), ADediting_53178(19329146, +), ADediting_53179(19329163, +), ADediting_53180(19329177, +), ADediting_53181(19329178, +), ADediting_53182(19329189, +), ADediting_53183(19329203, +), ADediting_53184(19329207, +), ADediting_1516817(19329107, +), ADediting_1598121(19329239, +), |
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RNA editing positional annotations for SLC66A1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_53148 | chr1_19319750_+ | intronic |
| ADediting_53149 | chr1_19319756_+ | intronic |
| ADediting_53150 | chr1_19319788_+ | intronic |
| ADediting_53153 | chr1_19323590_+ | intronic |
| ADediting_53158 | chr1_19329001_+ | UTR3 |
| ADediting_53159 | chr1_19329002_+ | UTR3 |
| ADediting_53160 | chr1_19329025_+ | UTR3 |
| ADediting_53161 | chr1_19329056_+ | UTR3 |
| ADediting_53162 | chr1_19329071_+ | UTR3 |
| ADediting_53163 | chr1_19329079_+ | UTR3 |
| ADediting_53164 | chr1_19329080_+ | UTR3 |
| ADediting_53165 | chr1_19329081_+ | UTR3 |
| ADediting_53166 | chr1_19329086_+ | UTR3 |
| ADediting_53167 | chr1_19329092_+ | UTR3 |
| ADediting_53168 | chr1_19329096_+ | UTR3 |
| ADediting_53169 | chr1_19329097_+ | UTR3 |
| ADediting_53170 | chr1_19329101_+ | UTR3 |
| ADediting_53171 | chr1_19329104_+ | UTR3 |
| ADediting_53172 | chr1_19329106_+ | UTR3 |
| ADediting_53173 | chr1_19329110_+ | UTR3 |
| ADediting_53174 | chr1_19329114_+ | UTR3 |
| ADediting_53175 | chr1_19329126_+ | UTR3 |
| ADediting_53176 | chr1_19329136_+ | UTR3 |
| ADediting_53177 | chr1_19329142_+ | UTR3 |
| ADediting_53178 | chr1_19329146_+ | UTR3 |
| ADediting_53179 | chr1_19329163_+ | UTR3 |
| ADediting_53180 | chr1_19329177_+ | UTR3 |
| ADediting_53181 | chr1_19329178_+ | UTR3 |
| ADediting_53182 | chr1_19329189_+ | UTR3 |
| ADediting_53183 | chr1_19329203_+ | UTR3 |
| ADediting_53184 | chr1_19329207_+ | UTR3 |
| ADediting_1516817 | chr1_19329107_+ | UTR3 |
| ADediting_1598121 | chr1_19329239_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_53148 | chr1_19319750_+ | SINE | Alu | Name=AluSx |
| ADediting_53149 | chr1_19319756_+ | SINE | Alu | Name=AluSx |
| ADediting_53150 | chr1_19319788_+ | SINE | Alu | Name=AluSx |
| ADediting_53153 | chr1_19323590_+ | SINE | Alu | Name=AluSz6 |
| ADediting_53158 | chr1_19329001_+ | SINE | Alu | Name=AluSz |
| ADediting_53159 | chr1_19329002_+ | SINE | Alu | Name=AluSz |
| ADediting_53160 | chr1_19329025_+ | SINE | Alu | Name=AluSz |
| ADediting_53161 | chr1_19329056_+ | SINE | Alu | Name=AluSz |
| ADediting_53162 | chr1_19329071_+ | SINE | Alu | Name=AluSz |
| ADediting_53163 | chr1_19329079_+ | SINE | Alu | Name=AluSz |
| ADediting_53164 | chr1_19329080_+ | SINE | Alu | Name=AluSz |
| ADediting_53165 | chr1_19329081_+ | SINE | Alu | Name=AluSz |
| ADediting_53166 | chr1_19329086_+ | SINE | Alu | Name=AluSz |
| ADediting_53167 | chr1_19329092_+ | SINE | Alu | Name=AluSz |
| ADediting_53168 | chr1_19329096_+ | SINE | Alu | Name=AluSz |
| ADediting_53169 | chr1_19329097_+ | SINE | Alu | Name=AluSz |
| ADediting_53170 | chr1_19329101_+ | SINE | Alu | Name=AluSz |
| ADediting_53171 | chr1_19329104_+ | SINE | Alu | Name=AluSz |
| ADediting_53172 | chr1_19329106_+ | SINE | Alu | Name=AluSz |
| ADediting_53173 | chr1_19329110_+ | SINE | Alu | Name=AluSz |
| ADediting_53174 | chr1_19329114_+ | SINE | Alu | Name=AluSz |
| ADediting_53175 | chr1_19329126_+ | SINE | Alu | Name=AluSz |
| ADediting_53176 | chr1_19329136_+ | SINE | Alu | Name=AluSz |
| ADediting_53177 | chr1_19329142_+ | SINE | Alu | Name=AluSz |
| ADediting_53178 | chr1_19329146_+ | SINE | Alu | Name=AluSz |
| ADediting_53179 | chr1_19329163_+ | SINE | Alu | Name=AluSz |
| ADediting_53180 | chr1_19329177_+ | SINE | Alu | Name=AluSz |
| ADediting_53181 | chr1_19329178_+ | SINE | Alu | Name=AluSz |
| ADediting_53182 | chr1_19329189_+ | SINE | Alu | Name=AluSz |
| ADediting_53183 | chr1_19329203_+ | SINE | Alu | Name=AluSz |
| ADediting_53184 | chr1_19329207_+ | SINE | Alu | Name=AluSz |
| ADediting_1516817 | chr1_19329107_+ | SINE | Alu | Name=AluSz |
| ADediting_1598121 | chr1_19329239_+ | SINE | Alu | Name=AluSz |
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RNA A-to-I editing events in the alternative splicing sites for SLC66A1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC66A1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for SLC66A1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for SLC66A1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-513a-5p | chr1 | 19328995 | 19329001 | 7mer-m8 | 19328985 | 19329002 | 144 | -17.43 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-513a-5p | chr1 | 19328995 | 19329001 | 7mer-m8 | 19328985 | 19329002 | 144 | -17.43 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-513a-5p | chr1 | 19328995 | 19329001 | 7mer-m8 | 19328985 | 19329002 | 144 | -17.43 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3117-3p | chr1 | 19329000 | 19329006 | 7mer-m8 | 19328989 | 19329007 | 150 | -15.51 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4759 | chr1 | 19328999 | 19329006 | 8mer-1a | 19328986 | 19329006 | 153 | -15.48 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3117-3p | chr1 | 19329000 | 19329006 | 7mer-m8 | 19328989 | 19329007 | 150 | -15.51 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4759 | chr1 | 19328999 | 19329006 | 8mer-1a | 19328986 | 19329006 | 153 | -15.48 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3117-3p | chr1 | 19329000 | 19329006 | 7mer-m8 | 19328989 | 19329007 | 150 | -15.51 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4759 | chr1 | 19328999 | 19329006 | 8mer-1a | 19328986 | 19329006 | 153 | -15.48 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4281 | chr1 | 19329053 | 19329060 | 8mer-1a | 19329043 | 19329060 | 144 | -23.91 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6716-3p | chr1 | 19329049 | 19329055 | 7mer-m8 | 19329035 | 19329056 | 140 | -12.57 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4281 | chr1 | 19329053 | 19329060 | 8mer-1a | 19329043 | 19329060 | 144 | -23.91 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6716-3p | chr1 | 19329049 | 19329055 | 7mer-m8 | 19329035 | 19329056 | 140 | -12.57 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4281 | chr1 | 19329053 | 19329060 | 8mer-1a | 19329043 | 19329060 | 144 | -23.91 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6716-3p | chr1 | 19329049 | 19329055 | 7mer-m8 | 19329035 | 19329056 | 140 | -12.57 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3190-5p | chr1 | 19329064 | 19329070 | 7mer-m8 | 19329052 | 19329071 | 154 | -19.64 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3190-5p | chr1 | 19329064 | 19329070 | 7mer-m8 | 19329052 | 19329071 | 154 | -19.64 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3190-5p | chr1 | 19329064 | 19329070 | 7mer-m8 | 19329052 | 19329071 | 154 | -19.64 |
| ADediting_53163 | chr1_19329079_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-23a-5p | chr1 | 19329077 | 19329083 | 7mer-m8 | 19329062 | 19329084 | 144 | -21.43 |
| ADediting_53163 | chr1_19329079_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-23b-5p | chr1 | 19329077 | 19329083 | 7mer-m8 | 19329064 | 19329084 | 156 | -19.96 |
| ADediting_53163 | chr1_19329079_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-23a-5p | chr1 | 19329077 | 19329083 | 7mer-m8 | 19329062 | 19329084 | 144 | -21.43 |
| ADediting_53163 | chr1_19329079_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-23b-5p | chr1 | 19329077 | 19329083 | 7mer-m8 | 19329064 | 19329084 | 156 | -19.96 |
| ADediting_53163 | chr1_19329079_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-23a-5p | chr1 | 19329077 | 19329083 | 7mer-m8 | 19329062 | 19329084 | 144 | -21.43 |
| ADediting_53163 | chr1_19329079_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-23b-5p | chr1 | 19329077 | 19329083 | 7mer-m8 | 19329064 | 19329084 | 156 | -19.96 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-1229-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329057 | 19329081 | 146 | -16.14 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6511a-3p | chr1 | 19329073 | 19329080 | 8mer-1a | 19329059 | 19329080 | 145 | -15.78 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6511b-3p | chr1 | 19329073 | 19329080 | 8mer-1a | 19329058 | 19329080 | 140 | -14.97 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-1229-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329057 | 19329081 | 146 | -16.14 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6511a-3p | chr1 | 19329073 | 19329080 | 8mer-1a | 19329059 | 19329080 | 145 | -15.78 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6511b-3p | chr1 | 19329073 | 19329080 | 8mer-1a | 19329058 | 19329080 | 140 | -14.97 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-1229-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329057 | 19329081 | 146 | -16.14 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6511a-3p | chr1 | 19329073 | 19329080 | 8mer-1a | 19329059 | 19329080 | 145 | -15.78 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6511b-3p | chr1 | 19329073 | 19329080 | 8mer-1a | 19329058 | 19329080 | 140 | -14.97 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-412-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329059 | 19329081 | 153 | -17.3 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6754-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329061 | 19329081 | 144 | -15.76 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-412-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329059 | 19329081 | 153 | -17.3 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6754-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329061 | 19329081 | 144 | -15.76 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-412-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329059 | 19329081 | 153 | -17.3 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6754-3p | chr1 | 19329074 | 19329080 | 7mer-m8 | 19329061 | 19329081 | 144 | -15.76 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-483-5p | chr1 | 19329082 | 19329088 | 7mer-m8 | 19329068 | 19329089 | 140 | -14.01 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-483-5p | chr1 | 19329082 | 19329088 | 7mer-m8 | 19329068 | 19329089 | 140 | -14.01 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-483-5p | chr1 | 19329082 | 19329088 | 7mer-m8 | 19329068 | 19329089 | 140 | -14.01 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-374b-3p | chr1 | 19329089 | 19329096 | 8mer-1a | 19329074 | 19329096 | 151 | -12.2 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4756-3p | chr1 | 19329085 | 19329091 | 7mer-m8 | 19329073 | 19329092 | 151 | -16.82 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-374b-3p | chr1 | 19329089 | 19329096 | 8mer-1a | 19329074 | 19329096 | 151 | -12.2 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4756-3p | chr1 | 19329085 | 19329091 | 7mer-m8 | 19329073 | 19329092 | 151 | -16.82 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-374b-3p | chr1 | 19329089 | 19329096 | 8mer-1a | 19329074 | 19329096 | 151 | -12.2 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4756-3p | chr1 | 19329085 | 19329091 | 7mer-m8 | 19329073 | 19329092 | 151 | -16.82 |
| ADediting_53168 | chr1_19329096_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-325 | chr1 | 19329089 | 19329096 | 8mer-1a | 19329074 | 19329096 | 145 | -11.15 |
| ADediting_53168 | chr1_19329096_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-325 | chr1 | 19329089 | 19329096 | 8mer-1a | 19329074 | 19329096 | 145 | -11.15 |
| ADediting_53168 | chr1_19329096_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-325 | chr1 | 19329089 | 19329096 | 8mer-1a | 19329074 | 19329096 | 145 | -11.15 |
| ADediting_53169 | chr1_19329097_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-630 | chr1 | 19329095 | 19329102 | 8mer-1a | 19329082 | 19329102 | 158 | -15.14 |
| ADediting_53169 | chr1_19329097_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-630 | chr1 | 19329095 | 19329102 | 8mer-1a | 19329082 | 19329102 | 158 | -15.14 |
| ADediting_53169 | chr1_19329097_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-630 | chr1 | 19329095 | 19329102 | 8mer-1a | 19329082 | 19329102 | 158 | -15.14 |
| ADediting_53170 | chr1_19329101_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-153-5p | chr1 | 19329094 | 19329100 | 7mer-m8 | 19329079 | 19329101 | 148 | -8.16 |
| ADediting_53170 | chr1_19329101_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3680-3p | chr1 | 19329098 | 19329105 | 8mer-1a | 19329083 | 19329105 | 140 | -14.24 |
| ADediting_53170 | chr1_19329101_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-153-5p | chr1 | 19329094 | 19329100 | 7mer-m8 | 19329079 | 19329101 | 148 | -8.16 |
| ADediting_53170 | chr1_19329101_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3680-3p | chr1 | 19329098 | 19329105 | 8mer-1a | 19329083 | 19329105 | 140 | -14.24 |
| ADediting_53170 | chr1_19329101_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-153-5p | chr1 | 19329094 | 19329100 | 7mer-m8 | 19329079 | 19329101 | 148 | -8.16 |
| ADediting_53170 | chr1_19329101_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3680-3p | chr1 | 19329098 | 19329105 | 8mer-1a | 19329083 | 19329105 | 140 | -14.24 |
| ADediting_53171 | chr1_19329104_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4742-3p | chr1 | 19329097 | 19329104 | 8mer-1a | 19329082 | 19329104 | 142 | -9.18 |
| ADediting_53171 | chr1_19329104_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4742-3p | chr1 | 19329097 | 19329104 | 8mer-1a | 19329082 | 19329104 | 142 | -9.18 |
| ADediting_53171 | chr1_19329104_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4742-3p | chr1 | 19329097 | 19329104 | 8mer-1a | 19329082 | 19329104 | 142 | -9.18 |
| ADediting_53172 | chr1_19329106_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6844 | chr1 | 19329100 | 19329106 | 7mer-m8 | 19329086 | 19329107 | 155 | -7.49 |
| ADediting_53172 | chr1_19329106_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6844 | chr1 | 19329100 | 19329106 | 7mer-m8 | 19329086 | 19329107 | 155 | -7.49 |
| ADediting_53172 | chr1_19329106_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6844 | chr1 | 19329100 | 19329106 | 7mer-m8 | 19329086 | 19329107 | 155 | -7.49 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3190-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329096 | 19329115 | 143 | -16.24 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-548s | chr1 | 19329107 | 19329113 | 7mer-m8 | 19329092 | 19329114 | 145 | -11.19 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3190-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329096 | 19329115 | 143 | -16.24 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-548s | chr1 | 19329107 | 19329113 | 7mer-m8 | 19329092 | 19329114 | 145 | -11.19 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3190-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329096 | 19329115 | 143 | -16.24 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-548s | chr1 | 19329107 | 19329113 | 7mer-m8 | 19329092 | 19329114 | 145 | -11.19 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-941 | chr1 | 19329110 | 19329116 | 7mer-m8 | 19329095 | 19329117 | 146 | -23.83 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-941 | chr1 | 19329110 | 19329116 | 7mer-m8 | 19329095 | 19329117 | 146 | -23.83 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-941 | chr1 | 19329110 | 19329116 | 7mer-m8 | 19329095 | 19329117 | 146 | -23.83 |
| ADediting_53176 | chr1_19329136_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-140-3p | chr1 | 19329131 | 19329137 | 7mer-m8 | 19329118 | 19329138 | 152 | -19.89 |
| ADediting_53176 | chr1_19329136_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-140-3p | chr1 | 19329131 | 19329137 | 7mer-m8 | 19329118 | 19329138 | 152 | -19.89 |
| ADediting_53176 | chr1_19329136_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-140-3p | chr1 | 19329131 | 19329137 | 7mer-m8 | 19329118 | 19329138 | 152 | -19.89 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-1207-3p | chr1 | 19329139 | 19329145 | 7mer-m8 | 19329128 | 19329146 | 145 | -13.53 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-646 | chr1 | 19329141 | 19329147 | 7mer-m8 | 19329129 | 19329148 | 148 | -19.11 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-1207-3p | chr1 | 19329139 | 19329145 | 7mer-m8 | 19329128 | 19329146 | 145 | -13.53 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-646 | chr1 | 19329141 | 19329147 | 7mer-m8 | 19329129 | 19329148 | 148 | -19.11 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-1207-3p | chr1 | 19329139 | 19329145 | 7mer-m8 | 19329128 | 19329146 | 145 | -13.53 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-646 | chr1 | 19329141 | 19329147 | 7mer-m8 | 19329129 | 19329148 | 148 | -19.11 |
| ADediting_53180 | chr1_19329177_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-9900 | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329162 | 19329182 | 154 | -18.53 |
| ADediting_53180 | chr1_19329177_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-9900 | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329162 | 19329182 | 154 | -18.53 |
| ADediting_53180 | chr1_19329177_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-9900 | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329162 | 19329182 | 154 | -18.53 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3155a | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329161 | 19329182 | 149 | -24.21 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3155b | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329164 | 19329182 | 149 | -23.18 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-371a-5p | chr1 | 19329171 | 19329177 | 7mer-m8 | 19329159 | 19329178 | 147 | -12.91 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-484 | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329161 | 19329182 | 151 | -23.69 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3155a | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329161 | 19329182 | 149 | -24.21 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3155b | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329164 | 19329182 | 149 | -23.18 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-371a-5p | chr1 | 19329171 | 19329177 | 7mer-m8 | 19329159 | 19329178 | 147 | -12.91 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-484 | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329161 | 19329182 | 151 | -23.69 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3155a | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329161 | 19329182 | 149 | -24.21 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3155b | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329164 | 19329182 | 149 | -23.18 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-371a-5p | chr1 | 19329171 | 19329177 | 7mer-m8 | 19329159 | 19329178 | 147 | -12.91 |
| ADediting_53181 | chr1_19329178_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-484 | chr1 | 19329175 | 19329181 | 7mer-m8 | 19329161 | 19329182 | 151 | -23.69 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-340-3p | chr1 | 19329183 | 19329190 | 8mer-1a | 19329167 | 19329190 | 141 | -20.34 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6827-3p | chr1 | 19329183 | 19329190 | 8mer-1a | 19329170 | 19329190 | 156 | -20.58 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-340-3p | chr1 | 19329183 | 19329190 | 8mer-1a | 19329167 | 19329190 | 141 | -20.34 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6827-3p | chr1 | 19329183 | 19329190 | 8mer-1a | 19329170 | 19329190 | 156 | -20.58 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-340-3p | chr1 | 19329183 | 19329190 | 8mer-1a | 19329167 | 19329190 | 141 | -20.34 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6827-3p | chr1 | 19329183 | 19329190 | 8mer-1a | 19329170 | 19329190 | 156 | -20.58 |
| ADediting_53183 | chr1_19329203_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4284 | chr1 | 19329198 | 19329204 | 7mer-m8 | 19329188 | 19329205 | 151 | -17.31 |
| ADediting_53183 | chr1_19329203_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4638-5p | chr1 | 19329201 | 19329208 | 8mer-1a | 19329187 | 19329208 | 144 | -20.6 |
| ADediting_53183 | chr1_19329203_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4284 | chr1 | 19329198 | 19329204 | 7mer-m8 | 19329188 | 19329205 | 151 | -17.31 |
| ADediting_53183 | chr1_19329203_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4638-5p | chr1 | 19329201 | 19329208 | 8mer-1a | 19329187 | 19329208 | 144 | -20.6 |
| ADediting_53183 | chr1_19329203_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4284 | chr1 | 19329198 | 19329204 | 7mer-m8 | 19329188 | 19329205 | 151 | -17.31 |
| ADediting_53183 | chr1_19329203_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4638-5p | chr1 | 19329201 | 19329208 | 8mer-1a | 19329187 | 19329208 | 144 | -20.6 |
| ADediting_53184 | chr1_19329207_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-671-3p | chr1 | 19329200 | 19329206 | 7mer-m8 | 19329187 | 19329207 | 145 | -20.87 |
| ADediting_53184 | chr1_19329207_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-671-3p | chr1 | 19329200 | 19329206 | 7mer-m8 | 19329187 | 19329207 | 145 | -20.87 |
| ADediting_53184 | chr1_19329207_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-671-3p | chr1 | 19329200 | 19329206 | 7mer-m8 | 19329187 | 19329207 | 145 | -20.87 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1516817 | chr1_19329107_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_1516817 | chr1_19329107_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_1516817 | chr1_19329107_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_1598121 | chr1_19329239_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3664-5p | chr1 | 19329236 | 19329242 | 7mer-m8 | 19329221 | 19329243 | 151 | -18.82 |
| ADediting_1598121 | chr1_19329239_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6773-3p | chr1 | 19329233 | 19329240 | 8mer-1a | 19329219 | 19329240 | 142 | -15.63 |
| ADediting_1598121 | chr1_19329239_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3664-5p | chr1 | 19329236 | 19329242 | 7mer-m8 | 19329221 | 19329243 | 151 | -18.82 |
| ADediting_1598121 | chr1_19329239_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6773-3p | chr1 | 19329233 | 19329240 | 8mer-1a | 19329219 | 19329240 | 142 | -15.63 |
| ADediting_1598121 | chr1_19329239_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3664-5p | chr1 | 19329236 | 19329242 | 7mer-m8 | 19329221 | 19329243 | 151 | -18.82 |
| ADediting_1598121 | chr1_19329239_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6773-3p | chr1 | 19329233 | 19329240 | 8mer-1a | 19329219 | 19329240 | 142 | -15.63 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-10399-5p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 144 | -10.24 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6504-3p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 152 | -15.61 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-10399-5p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 144 | -10.24 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6504-3p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 152 | -15.61 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-10399-5p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 144 | -10.24 |
| ADediting_53158 | chr1_19329001_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6504-3p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 152 | -15.61 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-10399-5p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 144 | -10.24 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6504-3p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 152 | -15.61 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-10399-5p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 144 | -10.24 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6504-3p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 152 | -15.61 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-10399-5p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 144 | -10.24 |
| ADediting_53159 | chr1_19329002_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6504-3p | chr1 | 19328996 | 19329002 | 7mer-m8 | 19328982 | 19329003 | 152 | -15.61 |
| ADediting_53160 | chr1_19329025_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-10392-5p | chr1 | 19329021 | 19329027 | 7mer-m8 | 19329006 | 19329028 | 149 | -17.27 |
| ADediting_53160 | chr1_19329025_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-10392-5p | chr1 | 19329021 | 19329027 | 7mer-m8 | 19329006 | 19329028 | 149 | -17.27 |
| ADediting_53160 | chr1_19329025_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-10392-5p | chr1 | 19329021 | 19329027 | 7mer-m8 | 19329006 | 19329028 | 149 | -17.27 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6843-3p | chr1 | 19329054 | 19329060 | 7mer-m8 | 19329041 | 19329061 | 141 | -13.14 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6848-3p | chr1 | 19329054 | 19329060 | 7mer-m8 | 19329043 | 19329061 | 140 | -13.47 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6843-3p | chr1 | 19329054 | 19329060 | 7mer-m8 | 19329041 | 19329061 | 141 | -13.14 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6848-3p | chr1 | 19329054 | 19329060 | 7mer-m8 | 19329043 | 19329061 | 140 | -13.47 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6843-3p | chr1 | 19329054 | 19329060 | 7mer-m8 | 19329041 | 19329061 | 141 | -13.14 |
| ADediting_53161 | chr1_19329056_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6848-3p | chr1 | 19329054 | 19329060 | 7mer-m8 | 19329043 | 19329061 | 140 | -13.47 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4716-5p | chr1 | 19329069 | 19329075 | 7mer-m8 | 19329055 | 19329076 | 140 | -11.3 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4781-3p | chr1 | 19329067 | 19329073 | 7mer-m8 | 19329056 | 19329074 | 144 | -13.86 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4716-5p | chr1 | 19329069 | 19329075 | 7mer-m8 | 19329055 | 19329076 | 140 | -11.3 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4781-3p | chr1 | 19329067 | 19329073 | 7mer-m8 | 19329056 | 19329074 | 144 | -13.86 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4716-5p | chr1 | 19329069 | 19329075 | 7mer-m8 | 19329055 | 19329076 | 140 | -11.3 |
| ADediting_53162 | chr1_19329071_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4781-3p | chr1 | 19329067 | 19329073 | 7mer-m8 | 19329056 | 19329074 | 144 | -13.86 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-193b-5p | chr1 | 19329078 | 19329085 | 8mer-1a | 19329064 | 19329085 | 142 | -15.74 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-193b-5p | chr1 | 19329078 | 19329085 | 8mer-1a | 19329064 | 19329085 | 142 | -15.74 |
| ADediting_53164 | chr1_19329080_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-193b-5p | chr1 | 19329078 | 19329085 | 8mer-1a | 19329064 | 19329085 | 142 | -15.74 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-193b-5p | chr1 | 19329078 | 19329085 | 8mer-1a | 19329064 | 19329085 | 142 | -15.74 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3170 | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329065 | 19329086 | 140 | -13.8 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6855-5p | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329062 | 19329086 | 145 | -17.8 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-193b-5p | chr1 | 19329078 | 19329085 | 8mer-1a | 19329064 | 19329085 | 142 | -15.74 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3170 | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329065 | 19329086 | 140 | -13.8 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6855-5p | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329062 | 19329086 | 145 | -17.8 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-193b-5p | chr1 | 19329078 | 19329085 | 8mer-1a | 19329064 | 19329085 | 142 | -15.74 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3170 | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329065 | 19329086 | 140 | -13.8 |
| ADediting_53165 | chr1_19329081_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6855-5p | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329062 | 19329086 | 145 | -17.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-3170 | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329065 | 19329086 | 140 | -13.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6855-5p | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329062 | 19329086 | 145 | -17.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6890-5p | chr1 | 19329080 | 19329086 | 7mer-m8 | 19329067 | 19329087 | 142 | -13.42 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-3170 | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329065 | 19329086 | 140 | -13.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6855-5p | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329062 | 19329086 | 145 | -17.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6890-5p | chr1 | 19329080 | 19329086 | 7mer-m8 | 19329067 | 19329087 | 142 | -13.42 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-3170 | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329065 | 19329086 | 140 | -13.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6855-5p | chr1 | 19329079 | 19329085 | 7mer-m8 | 19329062 | 19329086 | 145 | -17.8 |
| ADediting_53166 | chr1_19329086_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6890-5p | chr1 | 19329080 | 19329086 | 7mer-m8 | 19329067 | 19329087 | 142 | -13.42 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6832-5p | chr1 | 19329086 | 19329092 | 7mer-m8 | 19329071 | 19329093 | 142 | -15.43 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6832-5p | chr1 | 19329086 | 19329092 | 7mer-m8 | 19329071 | 19329093 | 142 | -15.43 |
| ADediting_53167 | chr1_19329092_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6832-5p | chr1 | 19329086 | 19329092 | 7mer-m8 | 19329071 | 19329093 | 142 | -15.43 |
| ADediting_53172 | chr1_19329106_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_53172 | chr1_19329106_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_53172 | chr1_19329106_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4794 | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329094 | 19329115 | 140 | -12.3 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-664a-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329092 | 19329115 | 141 | -13.02 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4794 | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329094 | 19329115 | 140 | -12.3 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-664a-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329092 | 19329115 | 141 | -13.02 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4735-5p | chr1 | 19329104 | 19329110 | 7mer-m8 | 19329090 | 19329111 | 140 | -5.48 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4794 | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329094 | 19329115 | 140 | -12.3 |
| ADediting_53173 | chr1_19329110_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-664a-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329092 | 19329115 | 141 | -13.02 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4794 | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329094 | 19329115 | 140 | -12.3 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-664a-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329092 | 19329115 | 141 | -13.02 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6765-3p | chr1 | 19329111 | 19329117 | 7mer-m8 | 19329098 | 19329118 | 152 | -20.77 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4794 | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329094 | 19329115 | 140 | -12.3 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-664a-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329092 | 19329115 | 141 | -13.02 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6765-3p | chr1 | 19329111 | 19329117 | 7mer-m8 | 19329098 | 19329118 | 152 | -20.77 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4794 | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329094 | 19329115 | 140 | -12.3 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-664a-5p | chr1 | 19329108 | 19329114 | 7mer-m8 | 19329092 | 19329115 | 141 | -13.02 |
| ADediting_53174 | chr1_19329114_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6765-3p | chr1 | 19329111 | 19329117 | 7mer-m8 | 19329098 | 19329118 | 152 | -20.77 |
| ADediting_53175 | chr1_19329126_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-1227-3p | chr1 | 19329120 | 19329127 | 8mer-1a | 19329108 | 19329127 | 145 | -17.23 |
| ADediting_53175 | chr1_19329126_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-4715-3p | chr1 | 19329119 | 19329125 | 7mer-m8 | 19329104 | 19329126 | 155 | -21.25 |
| ADediting_53175 | chr1_19329126_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-1227-3p | chr1 | 19329120 | 19329127 | 8mer-1a | 19329108 | 19329127 | 145 | -17.23 |
| ADediting_53175 | chr1_19329126_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-4715-3p | chr1 | 19329119 | 19329125 | 7mer-m8 | 19329104 | 19329126 | 155 | -21.25 |
| ADediting_53175 | chr1_19329126_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-1227-3p | chr1 | 19329120 | 19329127 | 8mer-1a | 19329108 | 19329127 | 145 | -17.23 |
| ADediting_53175 | chr1_19329126_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-4715-3p | chr1 | 19329119 | 19329125 | 7mer-m8 | 19329104 | 19329126 | 155 | -21.25 |
| ADediting_53176 | chr1_19329136_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-8052 | chr1 | 19329135 | 19329141 | 7mer-1a | 19329120 | 19329141 | 142 | -20.68 |
| ADediting_53176 | chr1_19329136_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-8052 | chr1 | 19329135 | 19329141 | 7mer-1a | 19329120 | 19329141 | 142 | -20.68 |
| ADediting_53176 | chr1_19329136_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-8052 | chr1 | 19329135 | 19329141 | 7mer-1a | 19329120 | 19329141 | 142 | -20.68 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-562 | chr1 | 19329142 | 19329148 | 7mer-m8 | 19329129 | 19329149 | 151 | -13.31 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-5697 | chr1 | 19329143 | 19329149 | 7mer-m8 | 19329128 | 19329150 | 147 | -15.31 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-562 | chr1 | 19329142 | 19329148 | 7mer-m8 | 19329129 | 19329149 | 151 | -13.31 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-5697 | chr1 | 19329143 | 19329149 | 7mer-m8 | 19329128 | 19329150 | 147 | -15.31 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-562 | chr1 | 19329142 | 19329148 | 7mer-m8 | 19329129 | 19329149 | 151 | -13.31 |
| ADediting_53178 | chr1_19329146_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-5697 | chr1 | 19329143 | 19329149 | 7mer-m8 | 19329128 | 19329150 | 147 | -15.31 |
| ADediting_53179 | chr1_19329163_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-1976 | chr1 | 19329160 | 19329167 | 8mer-1a | 19329147 | 19329167 | 149 | -21.37 |
| ADediting_53179 | chr1_19329163_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6747-3p | chr1 | 19329158 | 19329165 | 8mer-1a | 19329144 | 19329165 | 150 | -24.11 |
| ADediting_53179 | chr1_19329163_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-1976 | chr1 | 19329160 | 19329167 | 8mer-1a | 19329147 | 19329167 | 149 | -21.37 |
| ADediting_53179 | chr1_19329163_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6747-3p | chr1 | 19329158 | 19329165 | 8mer-1a | 19329144 | 19329165 | 150 | -24.11 |
| ADediting_53179 | chr1_19329163_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-1976 | chr1 | 19329160 | 19329167 | 8mer-1a | 19329147 | 19329167 | 149 | -21.37 |
| ADediting_53179 | chr1_19329163_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6747-3p | chr1 | 19329158 | 19329165 | 8mer-1a | 19329144 | 19329165 | 150 | -24.11 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-6888-3p | chr1 | 19329184 | 19329190 | 7mer-m8 | 19329171 | 19329191 | 149 | -16.11 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-6888-3p | chr1 | 19329184 | 19329190 | 7mer-m8 | 19329171 | 19329191 | 149 | -16.11 |
| ADediting_53182 | chr1_19329189_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-6888-3p | chr1 | 19329184 | 19329190 | 7mer-m8 | 19329171 | 19329191 | 149 | -16.11 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_496066 | chr15_66496985_- | ENSG00000040487.13 | ENST00000432465.1 | SLC66A1-204 | hsa-miR-4512 | chr1 | 19327788 | 19327794 | 7mer-m8 | 19327773 | 19327795 | 146 | -22.36 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-5585-3p | chr1 | 19328897 | 19328903 | 7mer-m8 | 19328883 | 19328904 | 150 | -15.93 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-5585-3p | chr1 | 19328897 | 19328903 | 7mer-m8 | 19328883 | 19328904 | 150 | -15.93 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-5585-3p | chr1 | 19328897 | 19328903 | 7mer-m8 | 19328883 | 19328904 | 150 | -15.93 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_291761 | chr11_93733708_- | ENSG00000040487.13 | ENST00000375153.8 | SLC66A1-201 | hsa-miR-1304-3p | chr1 | 19328859 | 19328865 | 7mer-m8 | 19328846 | 19328866 | 155 | -21.39 |
| ADediting_291761 | chr11_93733708_- | ENSG00000040487.13 | ENST00000375155.7 | SLC66A1-202 | hsa-miR-1304-3p | chr1 | 19328859 | 19328865 | 7mer-m8 | 19328846 | 19328866 | 155 | -21.39 |
| ADediting_291761 | chr11_93733708_- | ENSG00000040487.13 | ENST00000400548.6 | SLC66A1-203 | hsa-miR-1304-3p | chr1 | 19328859 | 19328865 | 7mer-m8 | 19328846 | 19328866 | 155 | -21.39 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for SLC66A1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000375155.7 | protein_coding |  |  |
| ENST00000375153.8 | protein_coding |  |  |
| ENST00000400548.6 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_53158 | ENST00000375155.7 | chr1_19329001_+ | 1506 | -764.40 | -763.40 | -805.40 |
| ADediting_53159 | ENST00000375155.7 | chr1_19329002_+ | 1507 | -763.40 | -763.40 | -805.40 |
| ADediting_53160 | ENST00000375155.7 | chr1_19329025_+ | 1530 | -764.60 | -763.40 | -805.40 |
| ADediting_53161 | ENST00000375155.7 | chr1_19329056_+ | 1561 | -765.80 | -763.40 | -805.40 |
| ADediting_53162 | ENST00000375155.7 | chr1_19329071_+ | 1576 | -765.00 | -763.40 | -805.40 |
| ADediting_53163 | ENST00000375155.7 | chr1_19329079_+ | 1584 | -767.20 | -763.40 | -805.40 |
| ADediting_53164 | ENST00000375155.7 | chr1_19329080_+ | 1585 | -766.30 | -763.40 | -805.40 |
| ADediting_53165 | ENST00000375155.7 | chr1_19329081_+ | 1586 | -763.80 | -763.40 | -805.40 |
| ADediting_53166 | ENST00000375155.7 | chr1_19329086_+ | 1591 | -763.30 | -763.40 | -805.40 |
| ADediting_53167 | ENST00000375155.7 | chr1_19329092_+ | 1597 | -766.50 | -763.40 | -805.40 |
| ADediting_53168 | ENST00000375155.7 | chr1_19329096_+ | 1601 | -763.40 | -763.40 | -805.40 |
| ADediting_53169 | ENST00000375155.7 | chr1_19329097_+ | 1602 | -764.30 | -763.40 | -805.40 |
| ADediting_53170 | ENST00000375155.7 | chr1_19329101_+ | 1606 | -764.50 | -763.40 | -805.40 |
| ADediting_53171 | ENST00000375155.7 | chr1_19329104_+ | 1609 | -763.40 | -763.40 | -805.40 |
| ADediting_53172 | ENST00000375155.7 | chr1_19329106_+ | 1611 | -763.40 | -763.40 | -805.40 |
| ADediting_1516817 | ENST00000375155.7 | chr1_19329107_+ | 1612 | -763.40 | -763.40 | -805.40 |
| ADediting_53173 | ENST00000375155.7 | chr1_19329110_+ | 1615 | -764.00 | -763.40 | -805.40 |
| ADediting_53174 | ENST00000375155.7 | chr1_19329114_+ | 1619 | -762.70 | -763.40 | -805.40 |
| ADediting_53175 | ENST00000375155.7 | chr1_19329126_+ | 1631 | -763.10 | -763.40 | -805.40 |
| ADediting_53176 | ENST00000375155.7 | chr1_19329136_+ | 1641 | -765.30 | -763.40 | -805.40 |
| ADediting_53177 | ENST00000375155.7 | chr1_19329142_+ | 1647 | -762.60 | -763.40 | -805.40 |
| ADediting_53178 | ENST00000375155.7 | chr1_19329146_+ | 1651 | -763.40 | -763.40 | -805.40 |
| ADediting_53179 | ENST00000375155.7 | chr1_19329163_+ | 1668 | -762.70 | -763.40 | -805.40 |
| ADediting_53180 | ENST00000375155.7 | chr1_19329177_+ | 1682 | -765.30 | -763.40 | -805.40 |
| ADediting_53181 | ENST00000375155.7 | chr1_19329178_+ | 1683 | -768.10 | -763.40 | -805.40 |
| ADediting_53182 | ENST00000375155.7 | chr1_19329189_+ | 1694 | -763.70 | -763.40 | -805.40 |
| ADediting_53183 | ENST00000375155.7 | chr1_19329203_+ | 1708 | -763.40 | -763.40 | -805.40 |
| ADediting_53184 | ENST00000375155.7 | chr1_19329207_+ | 1712 | -765.80 | -763.40 | -805.40 |
| ADediting_1598121 | ENST00000375155.7 | chr1_19329239_+ | 1744 | -765.90 | -763.40 | -805.40 |
| ADediting_53158 | ENST00000375153.8 | chr1_19329001_+ | 1876 | -964.00 | -963.00 | -1003.70 |
| ADediting_53159 | ENST00000375153.8 | chr1_19329002_+ | 1877 | -963.00 | -963.00 | -1003.70 |
| ADediting_53160 | ENST00000375153.8 | chr1_19329025_+ | 1900 | -964.20 | -963.00 | -1003.70 |
| ADediting_53161 | ENST00000375153.8 | chr1_19329056_+ | 1931 | -965.40 | -963.00 | -1003.70 |
| ADediting_53162 | ENST00000375153.8 | chr1_19329071_+ | 1946 | -964.60 | -963.00 | -1003.70 |
| ADediting_53163 | ENST00000375153.8 | chr1_19329079_+ | 1954 | -966.80 | -963.00 | -1003.70 |
| ADediting_53164 | ENST00000375153.8 | chr1_19329080_+ | 1955 | -965.90 | -963.00 | -1003.70 |
| ADediting_53165 | ENST00000375153.8 | chr1_19329081_+ | 1956 | -963.40 | -963.00 | -1003.70 |
| ADediting_53166 | ENST00000375153.8 | chr1_19329086_+ | 1961 | -962.90 | -963.00 | -1003.70 |
| ADediting_53167 | ENST00000375153.8 | chr1_19329092_+ | 1967 | -966.10 | -963.00 | -1003.70 |
| ADediting_53168 | ENST00000375153.8 | chr1_19329096_+ | 1971 | -963.00 | -963.00 | -1003.70 |
| ADediting_53169 | ENST00000375153.8 | chr1_19329097_+ | 1972 | -963.90 | -963.00 | -1003.70 |
| ADediting_53170 | ENST00000375153.8 | chr1_19329101_+ | 1976 | -964.10 | -963.00 | -1003.70 |
| ADediting_53171 | ENST00000375153.8 | chr1_19329104_+ | 1979 | -963.00 | -963.00 | -1003.70 |
| ADediting_53172 | ENST00000375153.8 | chr1_19329106_+ | 1981 | -963.00 | -963.00 | -1003.70 |
| ADediting_1516817 | ENST00000375153.8 | chr1_19329107_+ | 1982 | -963.00 | -963.00 | -1003.70 |
| ADediting_53173 | ENST00000375153.8 | chr1_19329110_+ | 1985 | -963.60 | -963.00 | -1003.70 |
| ADediting_53174 | ENST00000375153.8 | chr1_19329114_+ | 1989 | -962.30 | -963.00 | -1003.70 |
| ADediting_53175 | ENST00000375153.8 | chr1_19329126_+ | 2001 | -962.70 | -963.00 | -1003.70 |
| ADediting_53176 | ENST00000375153.8 | chr1_19329136_+ | 2011 | -963.70 | -963.00 | -1003.70 |
| ADediting_53177 | ENST00000375153.8 | chr1_19329142_+ | 2017 | -962.20 | -963.00 | -1003.70 |
| ADediting_53178 | ENST00000375153.8 | chr1_19329146_+ | 2021 | -963.00 | -963.00 | -1003.70 |
| ADediting_53179 | ENST00000375153.8 | chr1_19329163_+ | 2038 | -962.30 | -963.00 | -1003.70 |
| ADediting_53180 | ENST00000375153.8 | chr1_19329177_+ | 2052 | -964.90 | -963.00 | -1003.70 |
| ADediting_53181 | ENST00000375153.8 | chr1_19329178_+ | 2053 | -966.20 | -963.00 | -1003.70 |
| ADediting_53182 | ENST00000375153.8 | chr1_19329189_+ | 2064 | -963.30 | -963.00 | -1003.70 |
| ADediting_53183 | ENST00000375153.8 | chr1_19329203_+ | 2078 | -963.00 | -963.00 | -1003.70 |
| ADediting_53184 | ENST00000375153.8 | chr1_19329207_+ | 2082 | -965.40 | -963.00 | -1003.70 |
| ADediting_1598121 | ENST00000375153.8 | chr1_19329239_+ | 2114 | -965.50 | -963.00 | -1003.70 |
| ADediting_53158 | ENST00000400548.6 | chr1_19329001_+ | 1249 | -654.40 | -653.40 | -692.20 |
| ADediting_53159 | ENST00000400548.6 | chr1_19329002_+ | 1250 | -653.40 | -653.40 | -692.20 |
| ADediting_53160 | ENST00000400548.6 | chr1_19329025_+ | 1273 | -654.20 | -653.40 | -692.20 |
| ADediting_53161 | ENST00000400548.6 | chr1_19329056_+ | 1304 | -655.80 | -653.40 | -692.20 |
| ADediting_53162 | ENST00000400548.6 | chr1_19329071_+ | 1319 | -655.00 | -653.40 | -692.20 |
| ADediting_53163 | ENST00000400548.6 | chr1_19329079_+ | 1327 | -657.20 | -653.40 | -692.20 |
| ADediting_53164 | ENST00000400548.6 | chr1_19329080_+ | 1328 | -656.30 | -653.40 | -692.20 |
| ADediting_53165 | ENST00000400548.6 | chr1_19329081_+ | 1329 | -653.80 | -653.40 | -692.20 |
| ADediting_53166 | ENST00000400548.6 | chr1_19329086_+ | 1334 | -652.70 | -653.40 | -692.20 |
| ADediting_53167 | ENST00000400548.6 | chr1_19329092_+ | 1340 | -656.50 | -653.40 | -692.20 |
| ADediting_53168 | ENST00000400548.6 | chr1_19329096_+ | 1344 | -653.40 | -653.40 | -692.20 |
| ADediting_53169 | ENST00000400548.6 | chr1_19329097_+ | 1345 | -654.30 | -653.40 | -692.20 |
| ADediting_53170 | ENST00000400548.6 | chr1_19329101_+ | 1349 | -654.50 | -653.40 | -692.20 |
| ADediting_53171 | ENST00000400548.6 | chr1_19329104_+ | 1352 | -653.40 | -653.40 | -692.20 |
| ADediting_53172 | ENST00000400548.6 | chr1_19329106_+ | 1354 | -653.40 | -653.40 | -692.20 |
| ADediting_1516817 | ENST00000400548.6 | chr1_19329107_+ | 1355 | -653.40 | -653.40 | -692.20 |
| ADediting_53173 | ENST00000400548.6 | chr1_19329110_+ | 1358 | -654.00 | -653.40 | -692.20 |
| ADediting_53174 | ENST00000400548.6 | chr1_19329114_+ | 1362 | -652.70 | -653.40 | -692.20 |
| ADediting_53175 | ENST00000400548.6 | chr1_19329126_+ | 1374 | -653.10 | -653.40 | -692.20 |
| ADediting_53176 | ENST00000400548.6 | chr1_19329136_+ | 1384 | -654.00 | -653.40 | -692.20 |
| ADediting_53177 | ENST00000400548.6 | chr1_19329142_+ | 1390 | -652.60 | -653.40 | -692.20 |
| ADediting_53178 | ENST00000400548.6 | chr1_19329146_+ | 1394 | -653.40 | -653.40 | -692.20 |
| ADediting_53179 | ENST00000400548.6 | chr1_19329163_+ | 1411 | -652.70 | -653.40 | -692.20 |
| ADediting_53180 | ENST00000400548.6 | chr1_19329177_+ | 1425 | -653.50 | -653.40 | -692.20 |
| ADediting_53181 | ENST00000400548.6 | chr1_19329178_+ | 1426 | -655.50 | -653.40 | -692.20 |
| ADediting_53182 | ENST00000400548.6 | chr1_19329189_+ | 1437 | -653.40 | -653.40 | -692.20 |
| ADediting_53183 | ENST00000400548.6 | chr1_19329203_+ | 1451 | -653.40 | -653.40 | -692.20 |
| ADediting_53184 | ENST00000400548.6 | chr1_19329207_+ | 1455 | -655.80 | -653.40 | -692.20 |
| ADediting_1598121 | ENST00000400548.6 | chr1_19329239_+ | 1487 | -653.00 | -653.40 | -692.20 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for SLC66A1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_53175 | chr1_19329126_+ | 0.502402073779292 | 0.0551835397807603 | 5.85080921416768e-05 | 0.322038355367802 | 0.0641092417761896 | -0.151561152270602 |
| CER | ADediting_53176 | chr1_19329136_+ | 0.0953118092697659 | 0.136696687126752 | 0.000167887765179958 | 0.302546062949888 | 0.175222072743297 | 0.111272199715104 |
| CER | ADediting_53182 | chr1_19329189_+ | 0.00157651942738577 | 0.255861978287926 | 1.1282042347329e-05 | 0.350043994138909 | 0.0874698747735883 | 0.140014033114155 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.66072329946593e-13 | 0.395623622199915 | 2.39824145208192e-09 | 0.330723371027998 | 6.2031515415126e-51 | 0.72069590937652 |
| AC | 1.28204530045781e-49 | 0.766601192231499 | 9.61636706732172e-38 | 0.697379262352649 | 2.23613045555092e-22 | 0.563794367429351 |
| PCC | 8.93890054135097e-26 | 0.665269772452958 | 5.65215551392252e-29 | 0.695804435920485 | 1.13062615095295e-05 | 0.311780907418562 |
| TCX | 8.87135111442357e-08 | 0.419858744412144 | 3.35821054196406e-06 | 0.369077363078781 | 2.26225158681885e-07 | 0.407562556305885 |
| FP | 1.97066911515515e-18 | 0.595057286494127 | 9.38027254491593e-14 | 0.520640773900134 | 5.84456144195713e-17 | 0.573584550843487 |
| IFG | 1.38457288358873e-05 | 0.753296812247482 | 1.13459442678871e-06 | 0.806349635054104 | 0.0243192522149653 | 0.449100971525862 |
| STG | 1.56036794924661e-11 | 0.653765475231862 | 1.53294130922255e-05 | 0.452730520946257 | 2.44172008236754e-06 | 0.488387169556302 |
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Relation with AD stages for SLC66A1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_53182 | chr1_19329189_+ | 2.68264600125004e-06 | 0.434105481095045 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.000303034780982715 | 0.344191820156663 |
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RelatedDrugs for SLC66A1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SLC66A1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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