ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for SGTB

Gene summary

Gene information	Gene symbol	SGTB
	Gene ID	54557
	Gene name	small glutamine rich tetratricopeptide repeat containing beta
	Synonyms	SGT2
	Cytomap	5q12.3
	Type of gene	protein-coding
	Description	small glutamine-rich tetratricopeptide repeat-containing protein betabeta-SGTsmall glutamine rich protein with tetratricopeptide repeats 2small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
	Modification date	20200327
	UniProtAcc	Q96EQ0,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SGTB

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_1209990(65667685, -), ADediting_1209991(65667958, -), ADediting_1209992(65667982, -), ADediting_1209993(65667983, -), ADediting_1209994(65667988, -), ADediting_1209995(65668000, -), ADediting_1209996(65668020, -), ADediting_1209997(65668021, -), ADediting_1209998(65668029, -), ADediting_1209999(65668038, -), ADediting_1210000(65668042, -), ADediting_1210001(65668044, -), ADediting_1210002(65668049, -), ADediting_1210003(65668050, -), ADediting_1210004(65668058, -), ADediting_1210005(65668059, -), ADediting_1210006(65668061, -), ADediting_1210007(65668064, -), ADediting_1210008(65668067, -), ADediting_1210009(65668068, -), ADediting_1210010(65668081, -), ADediting_1210011(65668091, -), ADediting_1210012(65668097, -), ADediting_1210013(65668117, -), ADediting_1210014(65668120, -), ADediting_1210015(65668121, -), ADediting_1210016(65668122, -), ADediting_1210017(65668126, -), ADediting_1210018(65668128, -), ADediting_1210019(65668129, -), ADediting_1210020(65668135, -), ADediting_1210021(65668145, -), ADediting_1210022(65668146, -), ADediting_1210023(65668147, -), ADediting_1210024(65668155, -), ADediting_1210025(65668170, -), ADediting_1210026(65668179, -), ADediting_1210027(65668184, -), ADediting_1210028(65668189, -), ADediting_1210029(65668203, -), ADediting_1210030(65668209, -), ADediting_1210031(65668220, -), ADediting_1210032(65668225, -), ADediting_1210033(65668226, -), ADediting_1210034(65668340, -), ADediting_1210035(65668344, -), ADediting_1210036(65668351, -), ADediting_1210037(65668353, -), ADediting_1210038(65668365, -), ADediting_1210039(65668366, -), ADediting_1210040(65668388, -), ADediting_1210041(65668392, -), ADediting_1210042(65668393, -), ADediting_1210043(65668418, -), ADediting_1210044(65668425, -), ADediting_1210045(65668444, -), ADediting_1210046(65668485, -), ADediting_1210047(65668487, -), ADediting_1210048(65668498, -), ADediting_1210049(65668499, -), ADediting_1210050(65668521, -), ADediting_1210051(65668529, -), ADediting_1210052(65668537, -), ADediting_1210053(65668549, -), ADediting_1210054(65668558, -), ADediting_1210055(65668561, -), ADediting_1210056(65668575, -), ADediting_1210057(65668592, -), ADediting_1210058(65668593, -), ADediting_1210059(65668597, -), ADediting_1210060(65668613, -), ADediting_1210061(65668617, -), ADediting_1210062(65668629, -), ADediting_1210063(65668641, -), ADediting_1210064(65668658, -), ADediting_1210065(65668659, -), ADediting_1210066(65668678, -), ADediting_1210067(65668684, -), ADediting_1210068(65668694, -), ADediting_1210069(65668695, -), ADediting_1210070(65668776, -), ADediting_1210071(65668786, -), ADediting_1210072(65668796, -), ADediting_1210073(65668799, -), ADediting_1210074(65668800, -), ADediting_1210075(65668807, -), ADediting_1210076(65668808, -), ADediting_1210077(65668814, -), ADediting_1210078(65668825, -), ADediting_1210079(65668826, -), ADediting_1210080(65668839, -), ADediting_1210081(65668845, -), ADediting_1210082(65668851, -), ADediting_1210083(65668856, -), ADediting_1210084(65668861, -), ADediting_1210085(65668875, -), ADediting_1210086(65668891, -), ADediting_1210087(65668903, -), ADediting_1210088(65694213, -), ADediting_1210089(65694581, -), ADediting_1210090(65705329, -), ADediting_1210091(65707026, -), ADediting_1210092(65707531, -), ADediting_1210093(65707546, -), ADediting_1210094(65707559, -), ADediting_1210095(65707563, -), ADediting_1210096(65707572, -), ADediting_1210097(65707591, -), ADediting_1210098(65707599, -), ADediting_1210099(65707608, -), ADediting_1210100(65707614, -), ADediting_1210101(65707628, -), ADediting_1210102(65709517, -), ADediting_1210103(65709649, -), ADediting_1210104(65719333, -), ADediting_1210105(65719471, -), ADediting_1210106(65719498, -), ADediting_1210107(65720179, -), ADediting_1210108(65720220, -), ADediting_1581753(65668217, -), ADediting_1581754(65668603, -), ADediting_1581755(65668773, -), ADediting_1657575(65668862, -), ADediting_1657576(65684669, -), ADediting_1657577(65684721, -), ADediting_1657578(65684732, -), ADediting_1657579(65684735, -), ADediting_1657580(65684795, -), ADediting_1657581(65684803, -), ADediting_1657582(65694332, -), ADediting_1657583(65694530, -), ADediting_1657584(65708856, -),

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RNA editing positional annotations for SGTB using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_1209990	chr5_65667685_-	UTR3
ADediting_1209991	chr5_65667958_-	UTR3
ADediting_1209992	chr5_65667982_-	UTR3
ADediting_1209993	chr5_65667983_-	UTR3
ADediting_1209994	chr5_65667988_-	UTR3
ADediting_1209995	chr5_65668000_-	UTR3
ADediting_1209996	chr5_65668020_-	UTR3
ADediting_1209997	chr5_65668021_-	UTR3
ADediting_1209998	chr5_65668029_-	UTR3
ADediting_1209999	chr5_65668038_-	UTR3
ADediting_1210000	chr5_65668042_-	UTR3
ADediting_1210001	chr5_65668044_-	UTR3
ADediting_1210002	chr5_65668049_-	UTR3
ADediting_1210003	chr5_65668050_-	UTR3
ADediting_1210004	chr5_65668058_-	UTR3
ADediting_1210005	chr5_65668059_-	UTR3
ADediting_1210006	chr5_65668061_-	UTR3
ADediting_1210007	chr5_65668064_-	UTR3
ADediting_1210008	chr5_65668067_-	UTR3
ADediting_1210009	chr5_65668068_-	UTR3
ADediting_1210010	chr5_65668081_-	UTR3
ADediting_1210011	chr5_65668091_-	UTR3
ADediting_1210012	chr5_65668097_-	UTR3
ADediting_1210013	chr5_65668117_-	UTR3
ADediting_1210014	chr5_65668120_-	UTR3
ADediting_1210015	chr5_65668121_-	UTR3
ADediting_1210016	chr5_65668122_-	UTR3
ADediting_1210017	chr5_65668126_-	UTR3
ADediting_1210018	chr5_65668128_-	UTR3
ADediting_1210019	chr5_65668129_-	UTR3
ADediting_1210020	chr5_65668135_-	UTR3
ADediting_1210021	chr5_65668145_-	UTR3
ADediting_1210022	chr5_65668146_-	UTR3
ADediting_1210023	chr5_65668147_-	UTR3
ADediting_1210024	chr5_65668155_-	UTR3
ADediting_1210025	chr5_65668170_-	UTR3
ADediting_1210026	chr5_65668179_-	UTR3
ADediting_1210027	chr5_65668184_-	UTR3
ADediting_1210028	chr5_65668189_-	UTR3
ADediting_1210029	chr5_65668203_-	UTR3
ADediting_1210030	chr5_65668209_-	UTR3
ADediting_1210031	chr5_65668220_-	UTR3
ADediting_1210032	chr5_65668225_-	UTR3
ADediting_1210033	chr5_65668226_-	UTR3
ADediting_1210034	chr5_65668340_-	UTR3
ADediting_1210035	chr5_65668344_-	UTR3
ADediting_1210036	chr5_65668351_-	UTR3
ADediting_1210037	chr5_65668353_-	UTR3
ADediting_1210038	chr5_65668365_-	UTR3
ADediting_1210039	chr5_65668366_-	UTR3
ADediting_1210040	chr5_65668388_-	UTR3
ADediting_1210041	chr5_65668392_-	UTR3
ADediting_1210042	chr5_65668393_-	UTR3
ADediting_1210043	chr5_65668418_-	UTR3
ADediting_1210044	chr5_65668425_-	UTR3
ADediting_1210045	chr5_65668444_-	UTR3
ADediting_1210046	chr5_65668485_-	UTR3
ADediting_1210047	chr5_65668487_-	UTR3
ADediting_1210048	chr5_65668498_-	UTR3
ADediting_1210049	chr5_65668499_-	UTR3
ADediting_1210050	chr5_65668521_-	UTR3
ADediting_1210051	chr5_65668529_-	UTR3
ADediting_1210052	chr5_65668537_-	UTR3
ADediting_1210053	chr5_65668549_-	UTR3
ADediting_1210054	chr5_65668558_-	UTR3
ADediting_1210055	chr5_65668561_-	UTR3
ADediting_1210056	chr5_65668575_-	UTR3
ADediting_1210057	chr5_65668592_-	UTR3
ADediting_1210058	chr5_65668593_-	UTR3
ADediting_1210059	chr5_65668597_-	UTR3
ADediting_1210060	chr5_65668613_-	UTR3
ADediting_1210061	chr5_65668617_-	UTR3
ADediting_1210062	chr5_65668629_-	UTR3
ADediting_1210063	chr5_65668641_-	UTR3
ADediting_1210064	chr5_65668658_-	UTR3
ADediting_1210065	chr5_65668659_-	UTR3
ADediting_1210066	chr5_65668678_-	UTR3
ADediting_1210067	chr5_65668684_-	UTR3
ADediting_1210068	chr5_65668694_-	UTR3
ADediting_1210069	chr5_65668695_-	UTR3
ADediting_1210070	chr5_65668776_-	UTR3
ADediting_1210071	chr5_65668786_-	UTR3
ADediting_1210072	chr5_65668796_-	UTR3
ADediting_1210073	chr5_65668799_-	UTR3
ADediting_1210074	chr5_65668800_-	UTR3
ADediting_1210075	chr5_65668807_-	UTR3
ADediting_1210076	chr5_65668808_-	UTR3
ADediting_1210077	chr5_65668814_-	UTR3
ADediting_1210078	chr5_65668825_-	UTR3
ADediting_1210079	chr5_65668826_-	UTR3
ADediting_1210080	chr5_65668839_-	UTR3
ADediting_1210081	chr5_65668845_-	UTR3
ADediting_1210082	chr5_65668851_-	UTR3
ADediting_1210083	chr5_65668856_-	UTR3
ADediting_1210084	chr5_65668861_-	UTR3
ADediting_1210085	chr5_65668875_-	UTR3
ADediting_1210086	chr5_65668891_-	UTR3
ADediting_1210087	chr5_65668903_-	UTR3
ADediting_1210088	chr5_65694213_-	intronic
ADediting_1210089	chr5_65694581_-	intronic
ADediting_1210090	chr5_65705329_-	intronic
ADediting_1210091	chr5_65707026_-	intronic
ADediting_1210092	chr5_65707531_-	intronic
ADediting_1210093	chr5_65707546_-	intronic
ADediting_1210094	chr5_65707559_-	intronic
ADediting_1210095	chr5_65707563_-	intronic
ADediting_1210096	chr5_65707572_-	intronic
ADediting_1210097	chr5_65707591_-	intronic
ADediting_1210098	chr5_65707599_-	intronic
ADediting_1210099	chr5_65707608_-	intronic
ADediting_1210100	chr5_65707614_-	intronic
ADediting_1210101	chr5_65707628_-	intronic
ADediting_1210102	chr5_65709517_-	intronic
ADediting_1210103	chr5_65709649_-	intronic
ADediting_1210104	chr5_65719333_-	intronic
ADediting_1210105	chr5_65719471_-	intronic
ADediting_1210106	chr5_65719498_-	intronic
ADediting_1210107	chr5_65720179_-	intronic
ADediting_1210108	chr5_65720220_-	intronic
ADediting_1581753	chr5_65668217_-	UTR3
ADediting_1581754	chr5_65668603_-	UTR3
ADediting_1581755	chr5_65668773_-	UTR3
ADediting_1657575	chr5_65668862_-	UTR3
ADediting_1657576	chr5_65684669_-	intronic
ADediting_1657577	chr5_65684721_-	intronic
ADediting_1657578	chr5_65684732_-	intronic
ADediting_1657579	chr5_65684735_-	intronic
ADediting_1657580	chr5_65684795_-	intronic
ADediting_1657581	chr5_65684803_-	intronic
ADediting_1657582	chr5_65694332_-	intronic
ADediting_1657583	chr5_65694530_-	intronic
ADediting_1657584	chr5_65708856_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_1209991	chr5_65667958_-	SINE	Alu	Name=AluSx1
ADediting_1209992	chr5_65667982_-	SINE	Alu	Name=AluSx1
ADediting_1209993	chr5_65667983_-	SINE	Alu	Name=AluSx1
ADediting_1209994	chr5_65667988_-	SINE	Alu	Name=AluSx1
ADediting_1209995	chr5_65668000_-	SINE	Alu	Name=AluSx1
ADediting_1209996	chr5_65668020_-	SINE	Alu	Name=AluSx1
ADediting_1209997	chr5_65668021_-	SINE	Alu	Name=AluSx1
ADediting_1209998	chr5_65668029_-	SINE	Alu	Name=AluSx1
ADediting_1209999	chr5_65668038_-	SINE	Alu	Name=AluSx1
ADediting_1210000	chr5_65668042_-	SINE	Alu	Name=AluSx1
ADediting_1210001	chr5_65668044_-	SINE	Alu	Name=AluSx1
ADediting_1210002	chr5_65668049_-	SINE	Alu	Name=AluSx1
ADediting_1210003	chr5_65668050_-	SINE	Alu	Name=AluSx1
ADediting_1210004	chr5_65668058_-	SINE	Alu	Name=AluSx1
ADediting_1210005	chr5_65668059_-	SINE	Alu	Name=AluSx1
ADediting_1210006	chr5_65668061_-	SINE	Alu	Name=AluSx1
ADediting_1210007	chr5_65668064_-	SINE	Alu	Name=AluSx1
ADediting_1210008	chr5_65668067_-	SINE	Alu	Name=AluSx1
ADediting_1210009	chr5_65668068_-	SINE	Alu	Name=AluSx1
ADediting_1210010	chr5_65668081_-	SINE	Alu	Name=AluSx1
ADediting_1210011	chr5_65668091_-	SINE	Alu	Name=AluSx1
ADediting_1210012	chr5_65668097_-	SINE	Alu	Name=AluSx1
ADediting_1210013	chr5_65668117_-	SINE	Alu	Name=AluSx1
ADediting_1210014	chr5_65668120_-	SINE	Alu	Name=AluSx1
ADediting_1210015	chr5_65668121_-	SINE	Alu	Name=AluSx1
ADediting_1210016	chr5_65668122_-	SINE	Alu	Name=AluSx1
ADediting_1210017	chr5_65668126_-	SINE	Alu	Name=AluSx1
ADediting_1210018	chr5_65668128_-	SINE	Alu	Name=AluSx1
ADediting_1210019	chr5_65668129_-	SINE	Alu	Name=AluSx1
ADediting_1210020	chr5_65668135_-	SINE	Alu	Name=AluSx1
ADediting_1210021	chr5_65668145_-	SINE	Alu	Name=AluSx1
ADediting_1210022	chr5_65668146_-	SINE	Alu	Name=AluSx1
ADediting_1210023	chr5_65668147_-	SINE	Alu	Name=AluSx1
ADediting_1210024	chr5_65668155_-	SINE	Alu	Name=AluSx1
ADediting_1210025	chr5_65668170_-	SINE	Alu	Name=AluSx1
ADediting_1210026	chr5_65668179_-	SINE	Alu	Name=AluSx1
ADediting_1210027	chr5_65668184_-	SINE	Alu	Name=AluSx1
ADediting_1210028	chr5_65668189_-	SINE	Alu	Name=AluSx1
ADediting_1210029	chr5_65668203_-	SINE	Alu	Name=AluSx1
ADediting_1210030	chr5_65668209_-	SINE	Alu	Name=AluSx1
ADediting_1210031	chr5_65668220_-	SINE	Alu	Name=AluSx1
ADediting_1210032	chr5_65668225_-	SINE	Alu	Name=AluSx1
ADediting_1210033	chr5_65668226_-	SINE	Alu	Name=AluSx1
ADediting_1210034	chr5_65668340_-	SINE	Alu	Name=AluSx1
ADediting_1210035	chr5_65668344_-	SINE	Alu	Name=AluSx1
ADediting_1210036	chr5_65668351_-	SINE	Alu	Name=AluSx1
ADediting_1210037	chr5_65668353_-	SINE	Alu	Name=AluSx1
ADediting_1210038	chr5_65668365_-	SINE	Alu	Name=AluSx1
ADediting_1210039	chr5_65668366_-	SINE	Alu	Name=AluSx1
ADediting_1210040	chr5_65668388_-	SINE	Alu	Name=AluSx1
ADediting_1210041	chr5_65668392_-	SINE	Alu	Name=AluSx1
ADediting_1210042	chr5_65668393_-	SINE	Alu	Name=AluSx1
ADediting_1210043	chr5_65668418_-	SINE	Alu	Name=AluSx1
ADediting_1210044	chr5_65668425_-	SINE	Alu	Name=AluSx1
ADediting_1210045	chr5_65668444_-	SINE	Alu	Name=AluSx1
ADediting_1210046	chr5_65668485_-	SINE	Alu	Name=AluSc
ADediting_1210047	chr5_65668487_-	SINE	Alu	Name=AluSc
ADediting_1210048	chr5_65668498_-	SINE	Alu	Name=AluSc
ADediting_1210049	chr5_65668499_-	SINE	Alu	Name=AluSc
ADediting_1210050	chr5_65668521_-	SINE	Alu	Name=AluSc
ADediting_1210051	chr5_65668529_-	SINE	Alu	Name=AluSc
ADediting_1210052	chr5_65668537_-	SINE	Alu	Name=AluSc
ADediting_1210053	chr5_65668549_-	SINE	Alu	Name=AluSc
ADediting_1210054	chr5_65668558_-	SINE	Alu	Name=AluSc
ADediting_1210055	chr5_65668561_-	SINE	Alu	Name=AluSc
ADediting_1210056	chr5_65668575_-	SINE	Alu	Name=AluSc
ADediting_1210057	chr5_65668592_-	SINE	Alu	Name=AluSc
ADediting_1210058	chr5_65668593_-	SINE	Alu	Name=AluSc
ADediting_1210059	chr5_65668597_-	SINE	Alu	Name=AluSc
ADediting_1210060	chr5_65668613_-	SINE	Alu	Name=AluSc
ADediting_1210061	chr5_65668617_-	SINE	Alu	Name=AluSc
ADediting_1210062	chr5_65668629_-	SINE	Alu	Name=AluSc
ADediting_1210063	chr5_65668641_-	SINE	Alu	Name=AluSc
ADediting_1210064	chr5_65668658_-	SINE	Alu	Name=AluSc
ADediting_1210065	chr5_65668659_-	SINE	Alu	Name=AluSc
ADediting_1210066	chr5_65668678_-	SINE	Alu	Name=AluSc
ADediting_1210067	chr5_65668684_-	SINE	Alu	Name=AluSc
ADediting_1210068	chr5_65668694_-	SINE	Alu	Name=AluSc
ADediting_1210069	chr5_65668695_-	SINE	Alu	Name=AluSc
ADediting_1210070	chr5_65668776_-	SINE	Alu	Name=AluSx1
ADediting_1210071	chr5_65668786_-	SINE	Alu	Name=AluSx1
ADediting_1210072	chr5_65668796_-	SINE	Alu	Name=AluSx1
ADediting_1210073	chr5_65668799_-	SINE	Alu	Name=AluSx1
ADediting_1210074	chr5_65668800_-	SINE	Alu	Name=AluSx1
ADediting_1210075	chr5_65668807_-	SINE	Alu	Name=AluSx1
ADediting_1210076	chr5_65668808_-	SINE	Alu	Name=AluSx1
ADediting_1210077	chr5_65668814_-	SINE	Alu	Name=AluSx1
ADediting_1210078	chr5_65668825_-	SINE	Alu	Name=AluSx1
ADediting_1210079	chr5_65668826_-	SINE	Alu	Name=AluSx1
ADediting_1210080	chr5_65668839_-	SINE	Alu	Name=AluSx1
ADediting_1210081	chr5_65668845_-	SINE	Alu	Name=AluSx1
ADediting_1210082	chr5_65668851_-	SINE	Alu	Name=AluSx1
ADediting_1210083	chr5_65668856_-	SINE	Alu	Name=AluSx1
ADediting_1210084	chr5_65668861_-	SINE	Alu	Name=AluSx1
ADediting_1210085	chr5_65668875_-	SINE	Alu	Name=AluSx1
ADediting_1210086	chr5_65668891_-	SINE	Alu	Name=AluSx1
ADediting_1210087	chr5_65668903_-	SINE	Alu	Name=AluSx1
ADediting_1210088	chr5_65694213_-	SINE	Alu	Name=AluSx1
ADediting_1210089	chr5_65694581_-	SINE	Alu	Name=AluSq
ADediting_1210090	chr5_65705329_-	SINE	Alu	Name=AluJb
ADediting_1210091	chr5_65707026_-	SINE	Alu	Name=AluSx
ADediting_1210092	chr5_65707531_-	SINE	Alu	Name=AluSc5
ADediting_1210093	chr5_65707546_-	SINE	Alu	Name=AluSc5
ADediting_1210094	chr5_65707559_-	SINE	Alu	Name=AluSc5
ADediting_1210095	chr5_65707563_-	SINE	Alu	Name=AluSc5
ADediting_1210096	chr5_65707572_-	SINE	Alu	Name=AluSc5
ADediting_1210097	chr5_65707591_-	SINE	Alu	Name=AluSc5
ADediting_1210098	chr5_65707599_-	SINE	Alu	Name=AluSc5
ADediting_1210099	chr5_65707608_-	SINE	Alu	Name=AluSc5
ADediting_1210100	chr5_65707614_-	SINE	Alu	Name=AluSc5
ADediting_1210101	chr5_65707628_-	SINE	Alu	Name=AluSc5
ADediting_1210102	chr5_65709517_-	SINE	Alu	Name=AluSc
ADediting_1210103	chr5_65709649_-	SINE	Alu	Name=AluSc
ADediting_1210104	chr5_65719333_-	SINE	Alu	Name=AluJb
ADediting_1210105	chr5_65719471_-	SINE	Alu	Name=AluJb
ADediting_1210106	chr5_65719498_-	SINE	Alu	Name=AluJb
ADediting_1210107	chr5_65720179_-	SINE	Alu	Name=AluSz6
ADediting_1210108	chr5_65720220_-	SINE	Alu	Name=AluSz6
ADediting_1581753	chr5_65668217_-	SINE	Alu	Name=AluSx1
ADediting_1581754	chr5_65668603_-	SINE	Alu	Name=AluSc
ADediting_1581755	chr5_65668773_-	SINE	Alu	Name=AluSx1
ADediting_1657575	chr5_65668862_-	SINE	Alu	Name=AluSx1
ADediting_1657576	chr5_65684669_-	SINE	Alu	Name=AluSz
ADediting_1657577	chr5_65684721_-	SINE	Alu	Name=AluSz
ADediting_1657578	chr5_65684732_-	SINE	Alu	Name=AluSz
ADediting_1657579	chr5_65684735_-	SINE	Alu	Name=AluSz
ADediting_1657580	chr5_65684795_-	SINE	Alu	Name=AluSz
ADediting_1657581	chr5_65684803_-	SINE	Alu	Name=AluSz
ADediting_1657582	chr5_65694332_-	SINE	Alu	Name=AluSx1
ADediting_1657583	chr5_65694530_-	SINE	Alu	Name=AluSq
ADediting_1657584	chr5_65708856_-	SINE	Alu	Name=AluJb

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RNA A-to-I editing events in the alternative splicing sites for SGTB

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SGTB

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for SGTB

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SGTB

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1209990	chr5_65667685_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4714-3p	chr5	65667685	65667691	7mer-m8	65667684	65667704	153	-19.9
ADediting_1209991	chr5_65667958_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-627-3p	chr5	65667952	65667959	8mer-1a	65667952	65667971	150	-10.66
ADediting_1209992	chr5_65667982_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6838-3p	chr5	65667978	65667984	7mer-m8	65667977	65667995	168	-24.31
ADediting_1209995	chr5_65668000_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4743-5p	chr5	65667997	65668003	7mer-m8	65667996	65668018	147	-23.99
ADediting_1209996	chr5_65668020_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-149-5p	chr5	65668020	65668026	7mer-m8	65668019	65668041	152	-22.11
ADediting_1209997	chr5_65668021_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4638-5p	chr5	65668018	65668025	8mer-1a	65668018	65668037	146	-20.28
ADediting_1210000	chr5_65668042_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1913	chr5	65668036	65668043	8mer-1a	65668036	65668056	147	-18.5
ADediting_1210000	chr5_65668042_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4749-3p	chr5	65668038	65668045	8mer-1a	65668038	65668057	140	-16.35
ADediting_1210001	chr5_65668044_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4726-3p	chr5	65668042	65668049	8mer-1a	65668042	65668063	150	-19.27
ADediting_1210001	chr5_65668044_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6778-3p	chr5	65668038	65668045	8mer-1a	65668038	65668056	143	-17.78
ADediting_1210001	chr5_65668044_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6791-3p	chr5	65668038	65668044	7mer-1a	65668038	65668057	145	-25.06
ADediting_1210002	chr5_65668049_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3155a	chr5	65668044	65668051	8mer-1a	65668044	65668065	149	-18.06
ADediting_1210002	chr5_65668049_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3155b	chr5	65668044	65668051	8mer-1a	65668044	65668062	149	-18.06
ADediting_1210002	chr5_65668049_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-484	chr5	65668044	65668051	8mer-1a	65668044	65668065	144	-18.87
ADediting_1210003	chr5_65668050_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-9900	chr5	65668044	65668051	8mer-1a	65668044	65668063	143	-15.92
ADediting_1210009	chr5_65668068_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6512-3p	chr5	65668067	65668073	7mer-m8	65668066	65668087	156	-24.35
ADediting_1210009	chr5_65668068_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6720-5p	chr5	65668067	65668073	7mer-m8	65668066	65668091	146	-23.88
ADediting_1210009	chr5_65668068_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6849-3p	chr5	65668067	65668074	8mer-1a	65668067	65668088	140	-18.12
ADediting_1210009	chr5_65668068_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-766-3p	chr5	65668066	65668072	7mer-m8	65668065	65668086	155	-24.4
ADediting_1210010	chr5_65668081_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1207-3p	chr5	65668081	65668087	7mer-m8	65668080	65668097	144	-12.96
ADediting_1210010	chr5_65668081_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-646	chr5	65668079	65668085	7mer-m8	65668078	65668096	149	-20.23
ADediting_1210012	chr5_65668097_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6499-5p	chr5	65668093	65668099	7mer-m8	65668092	65668112	144	-24.81
ADediting_1210012	chr5_65668097_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6789-3p	chr5	65668095	65668101	7mer-m8	65668094	65668114	147	-27.31
ADediting_1210012	chr5_65668097_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-9899	chr5	65668094	65668100	7mer-m8	65668093	65668115	156	-35.62
ADediting_1210013	chr5_65668117_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1972	chr5	65668112	65668118	7mer-m8	65668106	65668126	146	-25.46
ADediting_1210015	chr5_65668121_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6844	chr5	65668120	65668126	7mer-m8	65668119	65668140	155	-9.17
ADediting_1210016	chr5_65668122_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-578	chr5	65668120	65668126	7mer-m8	65668119	65668139	148	-9.43
ADediting_1210016	chr5_65668122_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-643	chr5	65668121	65668128	8mer-1a	65668121	65668143	151	-14.74
ADediting_1210017	chr5_65668126_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1250-3p	chr5	65668126	65668132	7mer-m8	65668125	65668142	141	-8.08
ADediting_1210017	chr5_65668126_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3680-3p	chr5	65668121	65668128	8mer-1a	65668121	65668143	143	-14.54
ADediting_1210020	chr5_65668135_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-2467-3p	chr5	65668134	65668140	7mer-m8	65668133	65668154	140	-18.27
ADediting_1210020	chr5_65668135_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4257	chr5	65668135	65668141	7mer-m8	65668134	65668151	155	-21.85
ADediting_1210020	chr5_65668135_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4291	chr5	65668130	65668137	8mer-1a	65668130	65668145	141	-13.27
ADediting_1210020	chr5_65668135_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-922	chr5	65668131	65668138	8mer-1a	65668131	65668153	145	-18.27
ADediting_1210021	chr5_65668145_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-412-3p	chr5	65668145	65668151	7mer-m8	65668144	65668166	153	-17.3
ADediting_1210021	chr5_65668145_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6754-3p	chr5	65668145	65668151	7mer-m8	65668144	65668164	144	-15.76
ADediting_1210022	chr5_65668146_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1229-3p	chr5	65668145	65668151	7mer-m8	65668144	65668168	146	-16.14
ADediting_1210022	chr5_65668146_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6511a-3p	chr5	65668145	65668152	8mer-1a	65668145	65668166	145	-15.78
ADediting_1210022	chr5_65668146_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6511b-3p	chr5	65668145	65668152	8mer-1a	65668145	65668167	140	-14.97
ADediting_1210023	chr5_65668147_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-23a-5p	chr5	65668141	65668148	8mer-1a	65668141	65668163	144	-18.42
ADediting_1210023	chr5_65668147_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-23b-5p	chr5	65668141	65668148	8mer-1a	65668141	65668161	156	-22.64
ADediting_1210024	chr5_65668155_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3190-5p	chr5	65668155	65668161	7mer-m8	65668154	65668173	154	-19.64
ADediting_1210027	chr5_65668184_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4726-3p	chr5	65668183	65668189	7mer-m8	65668182	65668205	166	-32.07
ADediting_1210029	chr5_65668203_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-18a-3p	chr5	65668198	65668204	7mer-m8	65668197	65668217	147	-21.43
ADediting_1210029	chr5_65668203_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3173-5p	chr5	65668199	65668205	7mer-1a	65668194	65668216	141	-25.52
ADediting_1210029	chr5_65668203_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3176	chr5	65668203	65668209	7mer-m8	65668202	65668220	140	-15.24
ADediting_1210029	chr5_65668203_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3922-3p	chr5	65668203	65668209	7mer-m8	65668202	65668223	141	-19.73
ADediting_1210029	chr5_65668203_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-874-3p	chr5	65668199	65668205	7mer-m8	65668198	65668221	156	-31.64
ADediting_1210031	chr5_65668220_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-371a-3p	chr5	65668215	65668221	7mer-m8	65668214	65668236	144	-15.05
ADediting_1210032	chr5_65668225_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-8052	chr5	65668220	65668226	7mer-1a	65668220	65668238	148	-29.06
ADediting_1210033	chr5_65668226_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-513a-5p	chr5	65668225	65668231	7mer-m8	65668224	65668241	152	-17.32
ADediting_1210033	chr5_65668226_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-638	chr5	65668220	65668226	7mer-1a	65668220	65668246	158	-34.88
ADediting_1210035	chr5_65668344_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-663b	chr5	65668339	65668345	7mer-m8	65668338	65668357	145	-22.59
ADediting_1210036	chr5_65668351_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5195-5p	chr5	65668348	65668354	7mer-m8	65668347	65668368	146	-17.02
ADediting_1210039	chr5_65668366_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-12119	chr5	65668365	65668371	7mer-m8	65668364	65668386	160	-30.21
ADediting_1210039	chr5_65668366_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3921	chr5	65668364	65668370	7mer-m8	65668363	65668387	143	-16.72
ADediting_1210039	chr5_65668366_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4653-5p	chr5	65668364	65668370	7mer-m8	65668363	65668381	144	-16.43
ADediting_1210039	chr5_65668366_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4714-5p	chr5	65668363	65668369	7mer-m8	65668362	65668383	148	-13.32
ADediting_1210040	chr5_65668388_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1255b-2-3p	chr5	65668387	65668393	7mer-m8	65668386	65668407	140	-8.7
ADediting_1210041	chr5_65668392_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622a-3p	chr5	65668388	65668395	8mer-1a	65668388	65668409	144	-13.89
ADediting_1210041	chr5_65668392_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622b-3p	chr5	65668388	65668395	8mer-1a	65668388	65668408	153	-19.33
ADediting_1210041	chr5_65668392_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-544b	chr5	65668391	65668397	7mer-m8	65668390	65668410	157	-19.04
ADediting_1210041	chr5_65668392_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7162-3p	chr5	65668392	65668398	7mer-m8	65668391	65668411	142	-17.47
ADediting_1210043	chr5_65668418_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3940-3p	chr5	65668414	65668420	7mer-m8	65668413	65668434	140	-21.51
ADediting_1210043	chr5_65668418_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6850-3p	chr5	65668417	65668423	7mer-m8	65668416	65668435	154	-27.7
ADediting_1210044	chr5_65668425_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4462	chr5	65668423	65668429	7mer-m8	65668422	65668444	150	-22.58
ADediting_1210048	chr5_65668498_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-12126	chr5	65668497	65668503	7mer-m8	65668496	65668520	149	-17.04
ADediting_1210048	chr5_65668498_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3614-5p	chr5	65668496	65668502	7mer-m8	65668495	65668518	155	-17.85
ADediting_1210048	chr5_65668498_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-383-3p	chr5	65668493	65668499	7mer-m8	65668492	65668511	148	-19.94
ADediting_1210049	chr5_65668499_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1298-3p	chr5	65668497	65668503	7mer-m8	65668496	65668516	143	-16.78
ADediting_1210049	chr5_65668499_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4314	chr5	65668498	65668504	7mer-m8	65668497	65668514	140	-13.95
ADediting_1210052	chr5_65668537_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4329	chr5	65668537	65668543	7mer-m8	65668536	65668557	141	-12.96
ADediting_1210052	chr5_65668537_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4499	chr5	65668534	65668540	7mer-m8	65668533	65668549	153	-15.47
ADediting_1210052	chr5_65668537_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6857-3p	chr5	65668535	65668541	7mer-m8	65668534	65668554	147	-15.2
ADediting_1210052	chr5_65668537_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-873-3p	chr5	65668533	65668539	7mer-m8	65668532	65668553	160	-22.78
ADediting_1210054	chr5_65668558_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-433-5p	chr5	65668557	65668563	7mer-m8	65668556	65668579	163	-28.05
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4661-5p	chr5	65668591	65668597	7mer-m8	65668590	65668609	145	-15.48
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548ae-3p	chr5	65668587	65668593	7mer-m8	65668586	65668606	141	-10.48
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548ah-3p	chr5	65668587	65668593	7mer-m8	65668586	65668608	143	-10.48
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548aj-3p	chr5	65668587	65668593	7mer-m8	65668586	65668606	141	-8.37
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548am-3p	chr5	65668587	65668593	7mer-m8	65668586	65668608	143	-10.48
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548aq-3p	chr5	65668587	65668593	7mer-m8	65668586	65668607	141	-10.48
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548j-3p	chr5	65668587	65668593	7mer-m8	65668586	65668606	141	-10.48
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-548x-3p	chr5	65668587	65668593	7mer-m8	65668586	65668605	141	-8.37
ADediting_1210057	chr5_65668592_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7844-5p	chr5	65668589	65668595	7mer-m8	65668588	65668609	160	-18.77
ADediting_1210058	chr5_65668593_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1207-3p	chr5	65668592	65668599	8mer-1a	65668592	65668609	144	-14.68
ADediting_1210058	chr5_65668593_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-34a-3p	chr5	65668590	65668596	7mer-m8	65668589	65668611	147	-10.64
ADediting_1210060	chr5_65668613_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6720-3p	chr5	65668612	65668618	7mer-m8	65668611	65668632	148	-24.06
ADediting_1210062	chr5_65668629_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4691-3p	chr5	65668625	65668631	7mer-m8	65668624	65668651	150	-26.36
ADediting_1210063	chr5_65668641_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6089	chr5	65668636	65668642	7mer-m8	65668635	65668658	164	-37.82
ADediting_1210064	chr5_65668658_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622a-3p	chr5	65668654	65668661	8mer-1a	65668654	65668675	148	-19.42
ADediting_1210064	chr5_65668658_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622b-3p	chr5	65668654	65668661	8mer-1a	65668654	65668674	155	-23.04
ADediting_1210066	chr5_65668678_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-17-3p	chr5	65668678	65668684	7mer-m8	65668677	65668699	155	-20.64
ADediting_1210066	chr5_65668678_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-485-5p	chr5	65668674	65668680	7mer-m8	65668673	65668693	153	-24.79
ADediting_1210066	chr5_65668678_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6884-5p	chr5	65668674	65668680	7mer-m8	65668673	65668698	147	-26.21
ADediting_1210070	chr5_65668776_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4767	chr5	65668775	65668781	7mer-m8	65668774	65668796	161	-29.46
ADediting_1210070	chr5_65668776_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6499-5p	chr5	65668776	65668782	7mer-m8	65668775	65668798	142	-22.3
ADediting_1210072	chr5_65668796_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4691-3p	chr5	65668792	65668798	7mer-m8	65668791	65668817	147	-23.85
ADediting_1210073	chr5_65668799_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3192-5p	chr5	65668799	65668805	7mer-m8	65668798	65668820	152	-23.32
ADediting_1210073	chr5_65668799_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7851-3p	chr5	65668796	65668803	8mer-1a	65668796	65668817	171	-33.03
ADediting_1210074	chr5_65668800_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6771-5p	chr5	65668799	65668805	7mer-m8	65668798	65668819	143	-26.65
ADediting_1210076	chr5_65668808_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3670	chr5	65668803	65668809	7mer-m8	65668802	65668825	149	-16.21
ADediting_1210077	chr5_65668814_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4740-3p	chr5	65668813	65668819	7mer-m8	65668812	65668831	142	-18.71
ADediting_1210077	chr5_65668814_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4747-3p	chr5	65668810	65668816	7mer-m8	65668809	65668830	153	-22.06
ADediting_1210078	chr5_65668825_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3140-5p	chr5	65668824	65668830	7mer-m8	65668823	65668841	148	-14.7
ADediting_1210078	chr5_65668825_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622a-3p	chr5	65668821	65668828	8mer-1a	65668821	65668841	143	-16.03
ADediting_1210078	chr5_65668825_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622b-3p	chr5	65668821	65668828	8mer-1a	65668821	65668840	149	-18.92
ADediting_1210078	chr5_65668825_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5187-3p	chr5	65668825	65668831	7mer-m8	65668824	65668844	145	-11.7
ADediting_1210080	chr5_65668839_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-25-5p	chr5	65668837	65668843	7mer-m8	65668836	65668855	143	-19.97
ADediting_1210080	chr5_65668839_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-658	chr5	65668838	65668844	7mer-m8	65668837	65668865	156	-30.05
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-17-3p	chr5	65668845	65668851	7mer-m8	65668844	65668866	157	-23.39
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-485-5p	chr5	65668841	65668847	7mer-m8	65668840	65668863	156	-18.38
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6884-5p	chr5	65668841	65668847	7mer-m8	65668840	65668863	158	-24.34
ADediting_1210083	chr5_65668856_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4537	chr5	65668851	65668858	8mer-1a	65668851	65668874	142	-19.26
ADediting_1210084	chr5_65668861_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4772-3p	chr5	65668861	65668867	7mer-m8	65668860	65668882	150	-17.79
ADediting_1210085	chr5_65668875_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-508-5p	chr5	65668871	65668877	7mer-m8	65668870	65668893	141	-20.94
ADediting_1210085	chr5_65668875_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6512-3p	chr5	65668873	65668879	7mer-m8	65668872	65668894	151	-19.24
ADediting_1210085	chr5_65668875_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6720-5p	chr5	65668873	65668879	7mer-m8	65668872	65668893	156	-24.36
ADediting_1210085	chr5_65668875_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6849-3p	chr5	65668873	65668880	8mer-1a	65668873	65668894	145	-16.76
ADediting_1210085	chr5_65668875_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-766-3p	chr5	65668872	65668878	7mer-m8	65668871	65668892	147	-19.72
ADediting_1210086	chr5_65668891_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-451b	chr5	65668889	65668895	7mer-m8	65668888	65668908	150	-13.88
ADediting_1210086	chr5_65668891_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4696	chr5	65668890	65668896	7mer-m8	65668889	65668910	140	-16.38
ADediting_1210087	chr5_65668903_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4733-5p	chr5	65668900	65668906	7mer-m8	65668899	65668918	151	-18.65
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-518a-3p	chr5	65668213	65668219	7mer-m8	65668212	65668233	145	-17.15
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-518b	chr5	65668213	65668219	7mer-m8	65668212	65668232	146	-21.79
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-518c-3p	chr5	65668213	65668219	7mer-m8	65668212	65668233	146	-18.08
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-518d-3p	chr5	65668213	65668219	7mer-m8	65668212	65668232	145	-17.84
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-518e-3p	chr5	65668214	65668220	7mer-m8	65668213	65668234	144	-14.43
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-518f-3p	chr5	65668213	65668219	7mer-m8	65668212	65668232	145	-17.48
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-526a-3p	chr5	65668213	65668219	7mer-m8	65668212	65668232	146	-17.71
ADediting_1581754	chr5_65668603_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-433-5p	chr5	65668602	65668608	7mer-m8	65668601	65668623	154	-22.09
ADediting_1581754	chr5_65668603_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-564	chr5	65668599	65668605	7mer-m8	65668598	65668616	157	-23.78
ADediting_1581755	chr5_65668773_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6786-5p	chr5	65668773	65668779	7mer-m8	65668772	65668793	148	-27.26

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1209992	chr5_65667982_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-431-5p	chr5	65667979	65667985	7mer-m8	65667978	65667996	147	-17.87
ADediting_1209993	chr5_65667983_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-431-5p	chr5	65667979	65667985	7mer-m8	65667978	65667996	147	-17.87
ADediting_1209993	chr5_65667983_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5691	chr5	65667982	65667989	8mer-1a	65667982	65668002	147	-19.02
ADediting_1209993	chr5_65667983_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6805-3p	chr5	65667982	65667989	8mer-1a	65667982	65668004	154	-21.46
ADediting_1209994	chr5_65667988_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5691	chr5	65667982	65667989	8mer-1a	65667982	65668002	147	-19.02
ADediting_1209994	chr5_65667988_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6773-3p	chr5	65667986	65667993	8mer-1a	65667986	65668007	142	-15.63
ADediting_1209994	chr5_65667988_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6805-3p	chr5	65667982	65667989	8mer-1a	65667982	65668004	154	-21.46
ADediting_1209995	chr5_65668000_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3652	chr5	65667997	65668003	7mer-m8	65667996	65668015	148	-20.61
ADediting_1210004	chr5_65668058_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5571-5p	chr5	65668056	65668062	7mer-m8	65668055	65668077	150	-27.64
ADediting_1210005	chr5_65668059_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5571-5p	chr5	65668056	65668062	7mer-m8	65668055	65668077	150	-27.64
ADediting_1210006	chr5_65668061_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5571-5p	chr5	65668056	65668062	7mer-m8	65668055	65668077	150	-27.64
ADediting_1210007	chr5_65668064_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3977	chr5	65668064	65668070	7mer-m8	65668063	65668088	150	-15.99
ADediting_1210008	chr5_65668067_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3977	chr5	65668064	65668070	7mer-m8	65668063	65668088	150	-15.99
ADediting_1210009	chr5_65668068_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3977	chr5	65668064	65668070	7mer-m8	65668063	65668088	150	-15.99
ADediting_1210010	chr5_65668081_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-562	chr5	65668078	65668084	7mer-m8	65668077	65668097	151	-13.1
ADediting_1210010	chr5_65668081_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5697	chr5	65668077	65668083	7mer-m8	65668076	65668097	146	-15.44
ADediting_1210013	chr5_65668117_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4735-5p	chr5	65668116	65668122	7mer-m8	65668115	65668136	148	-11.05
ADediting_1210014	chr5_65668120_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4735-5p	chr5	65668116	65668122	7mer-m8	65668115	65668136	148	-11.05
ADediting_1210015	chr5_65668121_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4735-5p	chr5	65668116	65668122	7mer-m8	65668115	65668136	148	-11.05
ADediting_1210019	chr5_65668129_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-30a-3p	chr5	65668128	65668135	8mer-1a	65668128	65668151	150	-10.9
ADediting_1210019	chr5_65668129_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-30d-3p	chr5	65668128	65668135	8mer-1a	65668128	65668148	154	-11.08
ADediting_1210019	chr5_65668129_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-30e-3p	chr5	65668128	65668135	8mer-1a	65668128	65668151	150	-11.03
ADediting_1210020	chr5_65668135_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-222-5p	chr5	65668130	65668137	8mer-1a	65668130	65668148	142	-11.19
ADediting_1210021	chr5_65668145_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6793-5p	chr5	65668140	65668146	7mer-m8	65668139	65668163	152	-19.8
ADediting_1210021	chr5_65668145_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6839-3p	chr5	65668141	65668147	7mer-m8	65668140	65668161	146	-12.53
ADediting_1210022	chr5_65668146_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6839-3p	chr5	65668141	65668147	7mer-m8	65668140	65668161	146	-12.53
ADediting_1210024	chr5_65668155_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4716-5p	chr5	65668150	65668156	7mer-m8	65668149	65668170	140	-11.3
ADediting_1210024	chr5_65668155_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4781-3p	chr5	65668152	65668158	7mer-m8	65668151	65668169	144	-13.86
ADediting_1210025	chr5_65668170_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-371a-5p	chr5	65668168	65668175	8mer-1a	65668168	65668187	146	-15.86
ADediting_1210025	chr5_65668170_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6843-3p	chr5	65668165	65668171	7mer-m8	65668164	65668183	152	-20.48
ADediting_1210025	chr5_65668170_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6848-3p	chr5	65668165	65668171	7mer-m8	65668164	65668181	142	-15.32
ADediting_1210027	chr5_65668184_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6790-3p	chr5	65668179	65668185	7mer-1a	65668179	65668200	145	-28.97
ADediting_1210028	chr5_65668189_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-125a-3p	chr5	65668184	65668191	8mer-1a	65668184	65668205	145	-20.61
ADediting_1210030	chr5_65668209_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-150-5p	chr5	65668208	65668214	7mer-m8	65668207	65668228	140	-15.8
ADediting_1210030	chr5_65668209_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6778-3p	chr5	65668206	65668212	7mer-m8	65668205	65668225	143	-13.97
ADediting_1210030	chr5_65668209_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6878-3p	chr5	65668203	65668210	8mer-1a	65668203	65668223	142	-14.14
ADediting_1210031	chr5_65668220_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5089-5p	chr5	65668220	65668226	7mer-m8	65668219	65668238	146	-13.24
ADediting_1210031	chr5_65668220_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-512-3p	chr5	65668215	65668221	7mer-m8	65668214	65668235	149	-15
ADediting_1210031	chr5_65668220_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6506-5p	chr5	65668219	65668225	7mer-m8	65668218	65668240	144	-16.21
ADediting_1210032	chr5_65668225_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-10399-5p	chr5	65668224	65668230	7mer-m8	65668223	65668246	148	-14.67
ADediting_1210032	chr5_65668225_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5089-5p	chr5	65668220	65668226	7mer-m8	65668219	65668238	146	-13.24
ADediting_1210032	chr5_65668225_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6504-3p	chr5	65668224	65668230	7mer-m8	65668223	65668244	155	-15.44
ADediting_1210033	chr5_65668226_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-10399-5p	chr5	65668224	65668230	7mer-m8	65668223	65668246	148	-14.67
ADediting_1210033	chr5_65668226_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6504-3p	chr5	65668224	65668230	7mer-m8	65668223	65668244	155	-15.44
ADediting_1210033	chr5_65668226_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7151-3p	chr5	65668225	65668232	8mer-1a	65668225	65668241	146	-17.62
ADediting_1210034	chr5_65668340_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-128-3p	chr5	65668335	65668341	7mer-m8	65668334	65668355	150	-17.82
ADediting_1210034	chr5_65668340_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-216a-3p	chr5	65668335	65668341	7mer-m8	65668334	65668354	151	-19.65
ADediting_1210034	chr5_65668340_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5693	chr5	65668337	65668343	7mer-m8	65668336	65668357	150	-20.01
ADediting_1210035	chr5_65668344_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-342-3p	chr5	65668343	65668349	7mer-m8	65668342	65668365	151	-18.19
ADediting_1210035	chr5_65668344_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4284	chr5	65668340	65668347	8mer-1a	65668340	65668357	153	-19.56
ADediting_1210040	chr5_65668388_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1288-5p	chr5	65668384	65668390	7mer-m8	65668383	65668402	141	-13.17
ADediting_1210045	chr5_65668444_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-136-5p	chr5	65668438	65668445	8mer-1a	65668438	65668460	144	-9.06
ADediting_1210048	chr5_65668498_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4310	chr5	65668493	65668499	7mer-m8	65668492	65668507	140	-8.38
ADediting_1210048	chr5_65668498_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7157-5p	chr5	65668493	65668499	7mer-m8	65668492	65668513	143	-17.96
ADediting_1210049	chr5_65668499_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-887-5p	chr5	65668498	65668505	8mer-1a	65668498	65668519	150	-16.93
ADediting_1210052	chr5_65668537_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5186	chr5	65668533	65668539	7mer-m8	65668532	65668552	155	-18.32
ADediting_1210053	chr5_65668549_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3128	chr5	65668548	65668554	7mer-m8	65668547	65668572	151	-19.88
ADediting_1210053	chr5_65668549_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-8073	chr5	65668546	65668553	8mer-1a	65668546	65668568	151	-21.18
ADediting_1210059	chr5_65668597_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1285-3p	chr5	65668596	65668602	7mer-m8	65668595	65668613	144	-18.62
ADediting_1210059	chr5_65668597_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3187-5p	chr5	65668596	65668602	7mer-m8	65668595	65668622	152	-26.87
ADediting_1210059	chr5_65668597_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5189-5p	chr5	65668596	65668602	7mer-m8	65668595	65668618	143	-20.22
ADediting_1210059	chr5_65668597_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-612	chr5	65668596	65668602	7mer-m8	65668595	65668620	148	-23.59
ADediting_1210059	chr5_65668597_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6860	chr5	65668596	65668602	7mer-m8	65668595	65668617	150	-22.2
ADediting_1210060	chr5_65668613_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1271-3p	chr5	65668612	65668618	7mer-m8	65668611	65668630	155	-21.22
ADediting_1210060	chr5_65668613_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-550a-3-5p	chr5	65668612	65668618	7mer-m8	65668611	65668630	140	-14.18
ADediting_1210060	chr5_65668613_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-550a-5p	chr5	65668612	65668618	7mer-m8	65668611	65668633	140	-17.97
ADediting_1210061	chr5_65668617_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1271-3p	chr5	65668612	65668618	7mer-m8	65668611	65668630	155	-21.22
ADediting_1210061	chr5_65668617_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-550a-3-5p	chr5	65668612	65668618	7mer-m8	65668611	65668630	140	-14.18
ADediting_1210061	chr5_65668617_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-550a-5p	chr5	65668612	65668618	7mer-m8	65668611	65668633	140	-17.97
ADediting_1210062	chr5_65668629_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5690	chr5	65668625	65668631	7mer-m8	65668624	65668644	145	-17.72
ADediting_1210063	chr5_65668641_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4478	chr5	65668637	65668643	7mer-m8	65668636	65668651	149	-25.05
ADediting_1210063	chr5_65668641_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4649-3p	chr5	65668640	65668646	7mer-m8	65668639	65668659	140	-14.11
ADediting_1210063	chr5_65668641_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7160-5p	chr5	65668639	65668645	7mer-m8	65668638	65668658	146	-17.63
ADediting_1210064	chr5_65668658_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3614-5p	chr5	65668654	65668660	7mer-1a	65668654	65668677	151	-25.18
ADediting_1210065	chr5_65668659_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3614-5p	chr5	65668654	65668660	7mer-1a	65668654	65668677	151	-25.18
ADediting_1210066	chr5_65668678_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-377-5p	chr5	65668674	65668680	7mer-m8	65668673	65668694	148	-19.22
ADediting_1210066	chr5_65668678_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6086	chr5	65668674	65668680	7mer-m8	65668673	65668692	150	-18.5
ADediting_1210066	chr5_65668678_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6516-5p	chr5	65668678	65668684	7mer-m8	65668677	65668696	148	-16.79
ADediting_1210070	chr5_65668776_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-541-3p	chr5	65668773	65668780	8mer-1a	65668773	65668796	147	-22.35
ADediting_1210070	chr5_65668776_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-654-5p	chr5	65668773	65668780	8mer-1a	65668773	65668793	144	-21.64
ADediting_1210072	chr5_65668796_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-5690	chr5	65668792	65668798	7mer-m8	65668791	65668811	145	-16.74
ADediting_1210073	chr5_65668799_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-12126	chr5	65668796	65668803	8mer-1a	65668796	65668819	144	-13.19
ADediting_1210073	chr5_65668799_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-887-5p	chr5	65668799	65668805	7mer-m8	65668798	65668818	145	-20.64
ADediting_1210074	chr5_65668800_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-12126	chr5	65668796	65668803	8mer-1a	65668796	65668819	144	-13.19
ADediting_1210074	chr5_65668800_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1273h-5p	chr5	65668799	65668805	7mer-1a	65668799	65668819	140	-21.89
ADediting_1210074	chr5_65668800_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-887-5p	chr5	65668799	65668805	7mer-m8	65668798	65668818	145	-20.64
ADediting_1210075	chr5_65668807_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-27b-5p	chr5	65668803	65668809	7mer-m8	65668802	65668822	146	-14.25
ADediting_1210075	chr5_65668807_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4720-3p	chr5	65668805	65668811	7mer-m8	65668804	65668824	140	-7.98
ADediting_1210076	chr5_65668808_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-27b-5p	chr5	65668803	65668809	7mer-m8	65668802	65668822	146	-14.25
ADediting_1210076	chr5_65668808_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4720-3p	chr5	65668805	65668811	7mer-m8	65668804	65668824	140	-7.98
ADediting_1210078	chr5_65668825_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3614-5p	chr5	65668821	65668827	7mer-1a	65668821	65668843	149	-20.12
ADediting_1210079	chr5_65668826_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3614-5p	chr5	65668821	65668827	7mer-1a	65668821	65668843	149	-20.12
ADediting_1210080	chr5_65668839_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3689d	chr5	65668834	65668840	7mer-m8	65668833	65668853	146	-14.77
ADediting_1210080	chr5_65668839_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6851-5p	chr5	65668834	65668840	7mer-m8	65668833	65668855	146	-26.08
ADediting_1210080	chr5_65668839_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-7847-3p	chr5	65668838	65668844	7mer-m8	65668837	65668859	146	-20.19
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3689d	chr5	65668839	65668845	7mer-1a	65668833	65668853	146	-14.77
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-377-5p	chr5	65668841	65668847	7mer-m8	65668840	65668863	154	-17.36
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6086	chr5	65668841	65668847	7mer-m8	65668840	65668859	150	-21.66
ADediting_1210081	chr5_65668845_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6516-5p	chr5	65668845	65668851	7mer-m8	65668844	65668866	148	-11.7
ADediting_1210083	chr5_65668856_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6719-3p	chr5	65668855	65668861	7mer-m8	65668854	65668877	150	-16.25
ADediting_1210085	chr5_65668875_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-1287-3p	chr5	65668873	65668879	7mer-m8	65668872	65668894	149	-20.17
ADediting_1210086	chr5_65668891_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-499a-5p	chr5	65668891	65668897	7mer-m8	65668890	65668909	142	-8.32
ADediting_1210087	chr5_65668903_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-371b-5p	chr5	65668901	65668908	8mer-1a	65668901	65668922	150	-11.06
ADediting_1210087	chr5_65668903_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-373-5p	chr5	65668901	65668908	8mer-1a	65668901	65668922	141	-8.43
ADediting_1210087	chr5_65668903_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-616-5p	chr5	65668901	65668908	8mer-1a	65668901	65668925	147	-14.35
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-302a-3p	chr5	65668214	65668220	7mer-m8	65668213	65668234	143	-11.02
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-302b-3p	chr5	65668214	65668220	7mer-m8	65668213	65668235	141	-9.54
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-302c-3p	chr5	65668214	65668220	7mer-m8	65668213	65668233	145	-11.96
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-302d-3p	chr5	65668214	65668220	7mer-m8	65668213	65668240	148	-13.74
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-302e	chr5	65668214	65668220	7mer-m8	65668213	65668229	141	-8.62
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-372-3p	chr5	65668214	65668220	7mer-m8	65668213	65668240	155	-21.14
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-512-3p	chr5	65668215	65668221	7mer-m8	65668214	65668235	149	-15
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-519d-3p	chr5	65668213	65668219	7mer-m8	65668212	65668232	146	-14.53
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520a-3p	chr5	65668214	65668220	7mer-m8	65668213	65668234	140	-11.03
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520b-3p	chr5	65668214	65668220	7mer-m8	65668213	65668232	141	-16.52
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520c-3p	chr5	65668214	65668220	7mer-m8	65668213	65668233	146	-16.52
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520d-3p	chr5	65668214	65668220	7mer-m8	65668213	65668234	140	-13.09
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520e-3p	chr5	65668214	65668220	7mer-m8	65668213	65668233	140	-13.32
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520g-3p	chr5	65668212	65668218	7mer-m8	65668211	65668233	151	-15.87
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-520h	chr5	65668212	65668218	7mer-m8	65668211	65668232	150	-15.08
ADediting_1581753	chr5_65668217_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-526b-3p	chr5	65668213	65668219	7mer-m8	65668212	65668232	146	-16.66
ADediting_1581754	chr5_65668603_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-3622b-5p	chr5	65668599	65668605	7mer-m8	65668598	65668615	143	-20.92
ADediting_1581754	chr5_65668603_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-4253	chr5	65668597	65668604	8mer-1a	65668597	65668614	140	-13.56
ADediting_1581754	chr5_65668603_-	ENSG00000197860.10	ENST00000381007.9	SGTB-201	hsa-miR-6862-5p	chr5	65668597	65668604	8mer-1a	65668597	65668619	155	-16.19

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1596844

chr1_162342605_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-556-3p

chr5

65665951

65665958

8mer-1a

65665951

65665971

156

-12.26

ADediting_286380

chr11_79422188_-

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-5579-3p

chr5

65667532

65667539

8mer-1a

65667532

65667555

153

-16.8

ADediting_286380

chr11_79422188_-

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-5579-3p

chr5

65669355

65669361

7mer-m8

65669354

65669377

146

-14.11

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1337757

chr7_5495852_-

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-589-3p

chr5

65669680

65669686

7mer-m8

65669679

65669702

149

-14.79

ADediting_1471003

chr9_63819626_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-4477b

chr5

65667414

65667420

7mer-m8

65667413

65667435

155

-11.66

ADediting_1471004

chr9_63819627_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-4477b

chr5

65667414

65667420

7mer-m8

65667413

65667435

155

-11.66

ADediting_1535951

chr14_100874558_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-337-3p

chr5

65667148

65667154

7mer-m8

65667147

65667170

150

-7.92

ADediting_1556067

chr19_40282625_-

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-641

chr5

65666863

65666869

7mer-m8

65666862

65666886

153

-12.6

ADediting_1631458

chr19_40282624_-

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-641

chr5

65666863

65666869

7mer-m8

65666862

65666886

153

-12.6

ADediting_527135

chr16_24203190_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-1273h-3p

chr5

65669534

65669540

7mer-m8

65669533

65669554

144

-16.89

ADediting_98288

chr1_32086990_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-5585-3p

chr5

65666697

65666704

8mer-1a

65666697

65666719

155

-15.74

ADediting_98289

chr1_32086992_+

ENSG00000197860.10

ENST00000381007.9

SGTB-201

hsa-miR-5585-3p

chr5

65666697

65666704

8mer-1a

65666697

65666719

155

-15.74

Differentially expressed gene-miRNA network

Differentially expressed mRNA-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SGTB

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000381007.9	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1209990	ENST00000381007.9	chr5_65667685_-	3691	-1672.20	-1672.50	-1742.00
ADediting_1209991	ENST00000381007.9	chr5_65667958_-	3418	-1672.60	-1672.50	-1742.00
ADediting_1209992	ENST00000381007.9	chr5_65667982_-	3394	-1672.10	-1672.50	-1742.00
ADediting_1209993	ENST00000381007.9	chr5_65667983_-	3393	-1676.40	-1672.50	-1742.00
ADediting_1209994	ENST00000381007.9	chr5_65667988_-	3388	-1671.80	-1672.50	-1742.00
ADediting_1209995	ENST00000381007.9	chr5_65668000_-	3376	-1671.80	-1672.50	-1742.00
ADediting_1209996	ENST00000381007.9	chr5_65668020_-	3356	-1673.00	-1672.50	-1742.00
ADediting_1209997	ENST00000381007.9	chr5_65668021_-	3355	-1675.60	-1672.50	-1742.00
ADediting_1209998	ENST00000381007.9	chr5_65668029_-	3347	-1671.80	-1672.50	-1742.00
ADediting_1209999	ENST00000381007.9	chr5_65668038_-	3338	-1671.80	-1672.50	-1742.00
ADediting_1210000	ENST00000381007.9	chr5_65668042_-	3334	-1671.60	-1672.50	-1742.00
ADediting_1210001	ENST00000381007.9	chr5_65668044_-	3332	-1679.40	-1672.50	-1742.00
ADediting_1210002	ENST00000381007.9	chr5_65668049_-	3327	-1672.50	-1672.50	-1742.00
ADediting_1210003	ENST00000381007.9	chr5_65668050_-	3326	-1672.00	-1672.50	-1742.00
ADediting_1210004	ENST00000381007.9	chr5_65668058_-	3318	-1672.50	-1672.50	-1742.00
ADediting_1210005	ENST00000381007.9	chr5_65668059_-	3317	-1672.00	-1672.50	-1742.00
ADediting_1210006	ENST00000381007.9	chr5_65668061_-	3315	-1671.60	-1672.50	-1742.00
ADediting_1210007	ENST00000381007.9	chr5_65668064_-	3312	-1671.80	-1672.50	-1742.00
ADediting_1210008	ENST00000381007.9	chr5_65668067_-	3309	-1679.10	-1672.50	-1742.00
ADediting_1210009	ENST00000381007.9	chr5_65668068_-	3308	-1671.60	-1672.50	-1742.00
ADediting_1210010	ENST00000381007.9	chr5_65668081_-	3295	-1672.50	-1672.50	-1742.00
ADediting_1210011	ENST00000381007.9	chr5_65668091_-	3285	-1672.10	-1672.50	-1742.00
ADediting_1210012	ENST00000381007.9	chr5_65668097_-	3279	-1677.30	-1672.50	-1742.00
ADediting_1210013	ENST00000381007.9	chr5_65668117_-	3259	-1672.20	-1672.50	-1742.00
ADediting_1210014	ENST00000381007.9	chr5_65668120_-	3256	-1672.50	-1672.50	-1742.00
ADediting_1210015	ENST00000381007.9	chr5_65668121_-	3255	-1672.60	-1672.50	-1742.00
ADediting_1210016	ENST00000381007.9	chr5_65668122_-	3254	-1672.60	-1672.50	-1742.00
ADediting_1210017	ENST00000381007.9	chr5_65668126_-	3250	-1672.50	-1672.50	-1742.00
ADediting_1210018	ENST00000381007.9	chr5_65668128_-	3248	-1672.50	-1672.50	-1742.00
ADediting_1210019	ENST00000381007.9	chr5_65668129_-	3247	-1672.60	-1672.50	-1742.00
ADediting_1210020	ENST00000381007.9	chr5_65668135_-	3241	-1672.50	-1672.50	-1742.00
ADediting_1210021	ENST00000381007.9	chr5_65668145_-	3231	-1672.50	-1672.50	-1742.00
ADediting_1210022	ENST00000381007.9	chr5_65668146_-	3230	-1672.60	-1672.50	-1742.00
ADediting_1210023	ENST00000381007.9	chr5_65668147_-	3229	-1672.00	-1672.50	-1742.00
ADediting_1210024	ENST00000381007.9	chr5_65668155_-	3221	-1672.50	-1672.50	-1742.00
ADediting_1210025	ENST00000381007.9	chr5_65668170_-	3206	-1671.60	-1672.50	-1742.00
ADediting_1210026	ENST00000381007.9	chr5_65668179_-	3197	-1671.70	-1672.50	-1742.00
ADediting_1210027	ENST00000381007.9	chr5_65668184_-	3192	-1671.60	-1672.50	-1742.00
ADediting_1210028	ENST00000381007.9	chr5_65668189_-	3187	-1672.10	-1672.50	-1742.00
ADediting_1210029	ENST00000381007.9	chr5_65668203_-	3173	-1672.20	-1672.50	-1742.00
ADediting_1210030	ENST00000381007.9	chr5_65668209_-	3167	-1679.20	-1672.50	-1742.00
ADediting_1581753	ENST00000381007.9	chr5_65668217_-	3159	-1672.10	-1672.50	-1742.00
ADediting_1210031	ENST00000381007.9	chr5_65668220_-	3156	-1671.80	-1672.50	-1742.00
ADediting_1210032	ENST00000381007.9	chr5_65668225_-	3151	-1672.50	-1672.50	-1742.00
ADediting_1210033	ENST00000381007.9	chr5_65668226_-	3150	-1672.60	-1672.50	-1742.00
ADediting_1210034	ENST00000381007.9	chr5_65668340_-	3036	-1671.90	-1672.50	-1742.00
ADediting_1210035	ENST00000381007.9	chr5_65668344_-	3032	-1673.80	-1672.50	-1742.00
ADediting_1210036	ENST00000381007.9	chr5_65668351_-	3025	-1678.50	-1672.50	-1742.00
ADediting_1210037	ENST00000381007.9	chr5_65668353_-	3023	-1672.40	-1672.50	-1742.00
ADediting_1210038	ENST00000381007.9	chr5_65668365_-	3011	-1675.80	-1672.50	-1742.00
ADediting_1210039	ENST00000381007.9	chr5_65668366_-	3010	-1675.30	-1672.50	-1742.00
ADediting_1210040	ENST00000381007.9	chr5_65668388_-	2988	-1675.30	-1672.50	-1742.00
ADediting_1210041	ENST00000381007.9	chr5_65668392_-	2984	-1678.90	-1672.50	-1742.00
ADediting_1210042	ENST00000381007.9	chr5_65668393_-	2983	-1672.90	-1672.50	-1742.00
ADediting_1210043	ENST00000381007.9	chr5_65668418_-	2958	-1672.30	-1672.50	-1742.00
ADediting_1210044	ENST00000381007.9	chr5_65668425_-	2951	-1672.50	-1672.50	-1742.00
ADediting_1210045	ENST00000381007.9	chr5_65668444_-	2932	-1675.40	-1672.50	-1742.00
ADediting_1210046	ENST00000381007.9	chr5_65668485_-	2891	-1673.80	-1672.50	-1742.00
ADediting_1210047	ENST00000381007.9	chr5_65668487_-	2889	-1674.30	-1672.50	-1742.00
ADediting_1210048	ENST00000381007.9	chr5_65668498_-	2878	-1676.90	-1672.50	-1742.00
ADediting_1210049	ENST00000381007.9	chr5_65668499_-	2877	-1672.90	-1672.50	-1742.00
ADediting_1210050	ENST00000381007.9	chr5_65668521_-	2855	-1674.80	-1672.50	-1742.00
ADediting_1210051	ENST00000381007.9	chr5_65668529_-	2847	-1674.80	-1672.50	-1742.00
ADediting_1210052	ENST00000381007.9	chr5_65668537_-	2839	-1672.80	-1672.50	-1742.00
ADediting_1210053	ENST00000381007.9	chr5_65668549_-	2827	-1673.60	-1672.50	-1742.00
ADediting_1210054	ENST00000381007.9	chr5_65668558_-	2818	-1672.10	-1672.50	-1742.00
ADediting_1210055	ENST00000381007.9	chr5_65668561_-	2815	-1672.10	-1672.50	-1742.00
ADediting_1210056	ENST00000381007.9	chr5_65668575_-	2801	-1672.20	-1672.50	-1742.00
ADediting_1210057	ENST00000381007.9	chr5_65668592_-	2784	-1672.50	-1672.50	-1742.00
ADediting_1210058	ENST00000381007.9	chr5_65668593_-	2783	-1672.60	-1672.50	-1742.00
ADediting_1210059	ENST00000381007.9	chr5_65668597_-	2779	-1676.50	-1672.50	-1742.00
ADediting_1581754	ENST00000381007.9	chr5_65668603_-	2773	-1671.50	-1672.50	-1742.00
ADediting_1210060	ENST00000381007.9	chr5_65668613_-	2763	-1677.30	-1672.50	-1742.00
ADediting_1210061	ENST00000381007.9	chr5_65668617_-	2759	-1678.70	-1672.50	-1742.00
ADediting_1210062	ENST00000381007.9	chr5_65668629_-	2747	-1672.20	-1672.50	-1742.00
ADediting_1210063	ENST00000381007.9	chr5_65668641_-	2735	-1671.80	-1672.50	-1742.00
ADediting_1210064	ENST00000381007.9	chr5_65668658_-	2718	-1672.40	-1672.50	-1742.00
ADediting_1210065	ENST00000381007.9	chr5_65668659_-	2717	-1678.50	-1672.50	-1742.00
ADediting_1210066	ENST00000381007.9	chr5_65668678_-	2698	-1672.50	-1672.50	-1742.00
ADediting_1210067	ENST00000381007.9	chr5_65668684_-	2692	-1672.10	-1672.50	-1742.00
ADediting_1210068	ENST00000381007.9	chr5_65668694_-	2682	-1672.50	-1672.50	-1742.00
ADediting_1210069	ENST00000381007.9	chr5_65668695_-	2681	-1672.20	-1672.50	-1742.00
ADediting_1581755	ENST00000381007.9	chr5_65668773_-	2603	-1677.00	-1672.50	-1742.00
ADediting_1210070	ENST00000381007.9	chr5_65668776_-	2600	-1676.10	-1672.50	-1742.00
ADediting_1210071	ENST00000381007.9	chr5_65668786_-	2590	-1675.20	-1672.50	-1742.00
ADediting_1210072	ENST00000381007.9	chr5_65668796_-	2580	-1672.20	-1672.50	-1742.00
ADediting_1210073	ENST00000381007.9	chr5_65668799_-	2577	-1672.50	-1672.50	-1742.00
ADediting_1210074	ENST00000381007.9	chr5_65668800_-	2576	-1672.50	-1672.50	-1742.00
ADediting_1210075	ENST00000381007.9	chr5_65668807_-	2569	-1675.10	-1672.50	-1742.00
ADediting_1210076	ENST00000381007.9	chr5_65668808_-	2568	-1672.50	-1672.50	-1742.00
ADediting_1210077	ENST00000381007.9	chr5_65668814_-	2562	-1671.60	-1672.50	-1742.00
ADediting_1210078	ENST00000381007.9	chr5_65668825_-	2551	-1679.10	-1672.50	-1742.00
ADediting_1210079	ENST00000381007.9	chr5_65668826_-	2550	-1673.70	-1672.50	-1742.00
ADediting_1210080	ENST00000381007.9	chr5_65668839_-	2537	-1672.10	-1672.50	-1742.00
ADediting_1210081	ENST00000381007.9	chr5_65668845_-	2531	-1672.50	-1672.50	-1742.00
ADediting_1210082	ENST00000381007.9	chr5_65668851_-	2525	-1671.80	-1672.50	-1742.00
ADediting_1210083	ENST00000381007.9	chr5_65668856_-	2520	-1672.50	-1672.50	-1742.00
ADediting_1210084	ENST00000381007.9	chr5_65668861_-	2515	-1678.70	-1672.50	-1742.00
ADediting_1657575	ENST00000381007.9	chr5_65668862_-	2514	-1671.80	-1672.50	-1742.00
ADediting_1210085	ENST00000381007.9	chr5_65668875_-	2501	-1672.50	-1672.50	-1742.00
ADediting_1210086	ENST00000381007.9	chr5_65668891_-	2485	-1677.10	-1672.50	-1742.00
ADediting_1210087	ENST00000381007.9	chr5_65668903_-	2473	-1672.60	-1672.50	-1742.00

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for SGTB

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
CER	ADediting_1209995	chr5_65668000_-	9.06879273451863e-06	0.353565459437501	9.99399665974355e-07	0.386974582082925	0.986497476957127	0.00139347161875072
CER	ADediting_1209996	chr5_65668020_-	7.63633426255533e-09	0.449927486608204	2.94259074490313e-07	0.40401844979635	0.746857095075987	0.0265730309189567
TCX	ADediting_1209996	chr5_65668020_-	6.83775856064839e-10	0.476915929849026	1.68336493703601e-09	0.467111826996691	0.0330676255684201	-0.174141642709427
CER	ADediting_1209997	chr5_65668021_-	4.16389308189558e-06	0.365787465988629	0.000325942456644436	0.289540391810713	0.527989204572277	0.0519269561883329
TCX	ADediting_1209997	chr5_65668021_-	3.71515734229498e-06	0.367536493953689	0.000203447019021721	0.298842682195037	0.0114134293865328	-0.206057772605471
TCX	ADediting_1209998	chr5_65668029_-	8.56509728285036e-06	0.354480054396703	0.00299390799114487	0.240803413379045	0.223757850371562	-0.0999217528959494
IFG	ADediting_1209998	chr5_65668029_-	0.948663382944522	0.0135713258811954	0.498230154619996	-0.142037922480069	0.00149967608350781	0.600633548450585
CER	ADediting_1209999	chr5_65668038_-	3.29571627243686e-10	0.484637378554169	1.10702758697528e-06	0.385504601328755	0.30247855125307	0.0847490300639427
TCX	ADediting_1209999	chr5_65668038_-	4.71834280697411e-11	0.504309755596035	2.97764520170236e-10	0.485696061890793	0.0738602248182979	-0.146384326658315
CER	ADediting_1210001	chr5_65668044_-	3.99806790917829e-07	0.399834294092558	4.27393889170631e-07	0.398915830162593	0.752504947451132	0.0259600771586872
CER	ADediting_1210002	chr5_65668049_-	1.51454881770482e-10	0.492657028958161	1.96687144443429e-07	0.409431961496449	0.0405550980821241	0.167440831229336
TCX	ADediting_1210002	chr5_65668049_-	2.83200198040083e-05	0.334719029034402	3.94088630942797e-05	0.329013776822972	0.381253018232783	-0.0720010921770766
CER	ADediting_1210004	chr5_65668058_-	5.33410539937428e-05	0.323685693195423	0.00014377563020997	0.305499272588372	0.392139586476681	0.070373202468959
IFG	ADediting_1210004	chr5_65668058_-	0.256663534167598	0.235715352366379	0.372614092216358	0.186286558619455	0.0450472834775703	0.404243592970379
CER	ADediting_1210008	chr5_65668067_-	7.57135291176866e-07	0.390928963510678	1.35380907439019e-05	0.347071699957887	0.0320539427261479	0.175145277634873
CER	ADediting_1210010	chr5_65668081_-	5.34138934807823e-08	0.426323255547767	1.2487322504985e-07	0.415424731199092	0.0468697029483451	0.16255556875793
CER	ADediting_1210011	chr5_65668091_-	3.52890929163877e-13	0.548907514037204	5.58329189004078e-11	0.502654839490442	0.00210035763278226	0.24923646851772
STG	ADediting_1210011	chr5_65668091_-	0.0281040813212144	0.239672350537708	0.00152511474114536	0.340562198862597	0.730563944024477	-0.0381321393927484
CER	ADediting_1210012	chr5_65668097_-	2.53101230344193e-08	0.435600287901732	2.40447632273286e-05	0.337503592288154	0.298965198218031	0.0853650338616659
TCX	ADediting_1210012	chr5_65668097_-	0.000157807826143882	0.303729220850746	8.49957483605235e-07	0.389287952922856	0.734843582861634	0.0278817553774476
IFG	ADediting_1210012	chr5_65668097_-	0.940288634407928	-0.0157888665603939	0.435738136277671	-0.163187348105968	0.0229026317730104	0.453182786367557
CER	ADediting_1210013	chr5_65668117_-	1.46193732159987e-05	0.345809754391829	0.00177818544926486	0.25310290832376	0.0230151375259277	0.185542136833254
CER	ADediting_1210020	chr5_65668135_-	0.000284559209811648	0.292252772903611	0.000320876032380235	0.289854720629353	4.66532439445726e-05	0.326055808667645
CER	ADediting_1210026	chr5_65668179_-	9.52420771599026e-05	0.313195615569389	7.93684589508365e-05	0.316536755555306	0.000753451250805838	0.272170920958019
CER	ADediting_1210029	chr5_65668203_-	0.000164410941262328	0.302946504730028	0.000584485747397607	0.277554379047888	0.0845284609784671	0.14131966839918
CER	ADediting_1210032	chr5_65668225_-	7.61183681374314e-09	0.449965028853818	7.11747304115224e-09	0.45074858453367	0.000117431725999641	0.309308068321668
CER	ADediting_1210037	chr5_65668353_-	4.15599867622643e-09	0.45695584716837	1.73504825093367e-09	0.466777312680609	0.162529164704592	0.114615848660049
TCX	ADediting_1210037	chr5_65668353_-	0.00155919122266459	0.256113825124185	1.71873428559089e-06	0.379099400002101	0.296990107383873	-0.0857134319786093
CER	ADediting_1210041	chr5_65668392_-	0.00042716302310681	0.284055968160378	0.000103799955630708	0.31160496539693	0.00619487861655628	0.222550003957724
CER	ADediting_1210046	chr5_65668485_-	3.86844838522805e-07	0.400286940037163	4.94227009561969e-05	0.325037950357043	0.000311448835341393	0.290452037294029
TCX	ADediting_1210046	chr5_65668485_-	0.000953089477353955	0.267088435216346	0.480486030463236	0.0580425154606465	2.96601072270449e-05	0.333927476587034
STG	ADediting_1210046	chr5_65668485_-	0.00546580487804071	0.300588338784089	0.0114990590460707	0.274529083167984	0.967750158374412	-0.00447837810593037
CER	ADediting_1210047	chr5_65668487_-	1.52591999213967e-08	0.441731402202655	1.97873159833049e-09	0.465319364286351	0.000274213997842044	0.292987901166456
CER	ADediting_1210056	chr5_65668575_-	3.67448720934775e-05	0.330231758073276	4.91877374918158e-05	0.325122201044768	0.0139933478960343	0.200286698004499
CER	ADediting_1210059	chr5_65668597_-	0.00202887414929283	0.250045345766763	1.03895704255494e-05	0.351377876516629	0.00953578773612389	0.211030365774276
CER	ADediting_1210060	chr5_65668613_-	3.76788599867516e-07	0.400648207388221	1.91574456420179e-07	0.409782587843701	0.00201485185004846	0.250207046691455
CER	ADediting_1210061	chr5_65668617_-	5.23249950724764e-08	0.42658286005225	1.35153487363641e-07	0.414389545923397	0.00830780723987461	0.214773605337517
CER	ADediting_1210063	chr5_65668641_-	2.48168426742444e-07	0.406319355598592	7.8495666076324e-08	0.421430397764253	0.700661733406086	0.0316452247371314
TCX	ADediting_1210064	chr5_65668658_-	5.70514652094245e-05	0.32248848877192	0.0222881548759123	0.18652346129391	0.730288246184322	0.0283798157102782
CER	ADediting_1210065	chr5_65668659_-	2.29032880442727e-11	0.511316654496448	5.00196272850909e-09	0.454832149686798	0.0820411703515097	0.142452429090791
TCX	ADediting_1210065	chr5_65668659_-	3.79817971835672e-08	0.430593001073249	0.000220294674547869	0.297294327219751	0.510581987135054	0.0541333435768428
CER	ADediting_1210066	chr5_65668678_-	0.000264306655945393	0.29371644100692	1.06657038827998e-05	0.350953959622785	0.319682360554586	0.0817984901453798
CER	ADediting_1210070	chr5_65668776_-	3.13151294109973e-07	0.403173654411845	0.000572865343842294	0.27797551508601	0.695015077544942	0.0322730705205487
TCX	ADediting_1210070	chr5_65668776_-	5.79526971435765e-06	0.360657949098689	3.15746948593889e-05	0.332853072168361	0.210333073885844	-0.102867426398102
CER	ADediting_1210071	chr5_65668786_-	1.06825681912603e-06	0.386017787775788	1.55866746883109e-06	0.38053454837649	0.0246431924602865	0.183437628538704
CER	ADediting_1210072	chr5_65668796_-	1.1304965441978e-10	0.495620702772752	1.4020453911283e-08	0.442745496163646	0.00299276186338459	0.240812677266389
CER	ADediting_1210073	chr5_65668799_-	4.87857352699261e-11	0.503982121476613	1.24466022246623e-06	0.383811586471128	0.00348371396910029	0.237110137016985
TCX	ADediting_1210073	chr5_65668799_-	0.197806216028766	0.105740145012282	0.270809081603049	-0.0904850708709513	3.91363849261234e-05	0.329134742872712
CER	ADediting_1210075	chr5_65668807_-	7.04517152096389e-05	0.318699559979457	0.00217796154677198	0.248386151379235	0.00323126602054522	0.238950603300306
STG	ADediting_1210075	chr5_65668807_-	0.00499835804417074	0.303569372291128	0.0251606608240307	0.244234375280063	0.414137483946515	-0.0902726066945425
CER	ADediting_1210079	chr5_65668826_-	6.79313299671256e-10	0.476986063710846	2.32263217116208e-09	0.463532341803151	0.0109062533686786	0.20732541943604
CER	ADediting_1210080	chr5_65668839_-	1.65621641629545e-14	0.573766718822747	2.63172053464315e-12	0.531384900735573	0.0135534732642711	0.201200863790013
CER	ADediting_1210081	chr5_65668845_-	0.000151414424320643	0.304516708127517	0.00783831069851011	0.216335451986275	0.248650353923684	0.0947744437452445
CER	ADediting_1210083	chr5_65668856_-	6.84403763562409e-08	0.423181544028231	1.97066200621883e-05	0.340853408733019	0.0131269319524081	0.202112442949399
CER	ADediting_1210085	chr5_65668875_-	7.00975303134246e-12	0.522460795628775	1.97432275044976e-08	0.438625060486201	0.0013405593251813	0.259532015095397
CER	ADediting_1210086	chr5_65668891_-	7.86542920358983e-10	0.475412379773877	2.9233354136206e-07	0.404107444543867	0.00303528755955759	0.240471078135508
TCX	ADediting_1210086	chr5_65668891_-	6.65952320226832e-06	0.358474403192609	0.175958187702828	0.11108386815539	0.0349057732321972	0.172386369410934
STG	ADediting_1210086	chr5_65668891_-	0.0135795209724478	0.268363898373057	0.00328367693651183	0.317190214427723	0.285704896224354	-0.117843067030918
DLPFC	ADediting_1210107	chr5_65720179_-	0.360600803015886	-0.0520994526199407	0.0128950617462997	-0.141095241612953	5.5973527760201e-09	0.323397682941675

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	1.82493863294966e-28	0.573149756780524	1.15770482744122e-11	0.372901689473956	3.6942123651409e-11	0.36424022609745
AC	1.06189228550134e-97	0.911550716906882	4.21011827327033e-109	0.929066889948716	0.000404427835126596	0.222024815910749
PCC	2.8519739474229e-64	0.883841473389716	1.45228563645439e-82	0.92725622133101	0.582460172594302	0.0400285606105247
CER	3.9052206414203e-35	0.803358365468344	1.03876391149303e-15	0.594596948110102	0.149114890400344	0.11836877250134
TCX	1.14258656613689e-28	0.752809816607067	4.63342092374675e-27	0.737978116339995	0.00604839436785625	-0.223173051386705
FP	8.85329852271267e-15	0.538605220102897	3.56433100843958e-20	0.618562559218512	0.0597080107869197	-0.141418791625191
IFG	0.0152264556627968	0.479764007591256	0.180638244876939	0.276661163793717	0.0360359746857261	-0.421137359955156
PG	3.56431246836986e-49	0.832982374058025	2.21066269958205e-34	0.746463308679102	0.039621081858429	-0.151027839703642
STG	4.46608521012113e-16	0.744988916221666	2.17845879172325e-16	0.750108151675506	0.113157073811122	-0.174131962180566

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Relation with AD stages for SGTB

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
CER	ADediting_1210047	chr5_65668487_-	0.00156387210364073	0.300739810812755
CER	ADediting_1210071	chr5_65668786_-	0.000582798224688994	0.325683805868929
CER	ADediting_1210072	chr5_65668796_-	9.20885133499878e-05	0.367324008051231
CER	ADediting_1210075	chr5_65668807_-	0.00098852822253352	0.312598737060728
CER	ADediting_1210079	chr5_65668826_-	0.000378701832181317	0.335944279501493
CER	ADediting_1210080	chr5_65668839_-	0.000187890542869473	0.351906640405176
CER	ADediting_1210085	chr5_65668875_-	0.000682236824843133	0.321843374905382
TCX	ADediting_1210011	chr5_65668091_-	0.000372755080179389	0.339354956602992
TCX	ADediting_1210033	chr5_65668226_-	0.00063349395010675	0.326597138441951
TCX	ADediting_1210056	chr5_65668575_-	0.00120889717047354	0.310265598671581
TCX	ADediting_1210071	chr5_65668786_-	0.00144746860466832	0.305545548649948
IFG	ADediting_1210013	chr5_65668117_-	0.021566769125818	0.457223753092052
IFG	ADediting_1210079	chr5_65668826_-	0.00700196300363929	-0.525346338367757

Correlation between AD stages and this gene's expression

Tissue

P-val

Coeff.

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RelatedDrugs for SGTB

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SGTB

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Statistics

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Gene summary for SGTB

RNA A-to-I events for SGTB

RNA editing positional annotations for SGTB using Annovar

RNA A-to-I editing events in the alternative splicing sites for SGTB

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SGTB

Protein coding region RNA A-to-I editings for SGTB

The effects of the RNA editing to the miRNA binding sites for SGTB

The effects of the RNA editing to the stability of the RNA structures for SGTB

Relation with ADAR for SGTB

Relation with AD stages for SGTB

RelatedDrugs for SGTB

RelatedDiseases for SGTB

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene