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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for STAG3L1 |
 Gene summary |
| Gene information | Gene symbol | STAG3L1 | Gene ID | 54441 |
| Gene name | stromal antigen 3-like 1 (pseudogene) | |
| Synonyms | STAG3L1P|STAG3L2|STAG3L3 | |
| Cytomap | 7q11.23 | |
| Type of gene | pseudo | |
| Description | STAG3-like protein 1 | |
| Modification date | 20200313 | |
| UniProtAcc | P0CL83, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for STAG3L1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1363069(75366589, +), ADediting_1363070(75367110, +), ADediting_1363071(75367120, +), ADediting_1363072(75367157, +), ADediting_1363073(75367163, +), ADediting_1363074(75367166, +), ADediting_1363075(75367180, +), ADediting_1363076(75367188, +), ADediting_1363077(75367192, +), ADediting_1363078(75367241, +), ADediting_1363079(75367242, +), ADediting_1363080(75367243, +), ADediting_1363081(75367709, +), ADediting_1363082(75367716, +), ADediting_1363083(75367735, +), ADediting_1363084(75367850, +), ADediting_1363085(75368097, +), ADediting_1363086(75368119, +), ADediting_1363087(75368124, +), ADediting_1363088(75368137, +), ADediting_1363089(75368138, +), ADediting_1363090(75368143, +), ADediting_1363091(75368149, +), ADediting_1363092(75368152, +), ADediting_1363093(75368153, +), ADediting_1363094(75368174, +), ADediting_1363095(75368179, +), ADediting_1363096(75368183, +), ADediting_1363097(75368191, +), ADediting_1363098(75368218, +), ADediting_1363099(75368227, +), ADediting_1363100(75368244, +), ADediting_1363101(75368250, +), ADediting_1363102(75368259, +), ADediting_1363103(75368283, +), ADediting_1363104(75368288, +), ADediting_1363105(75368290, +), ADediting_1363106(75368313, +), ADediting_1363107(75368328, +), ADediting_1363108(75368384, +), ADediting_1363109(75368385, +), ADediting_1363110(75368390, +), ADediting_1363111(75368392, +), ADediting_1363112(75368393, +), ADediting_1363113(75368406, +), ADediting_1363114(75368414, +), ADediting_1363115(75368415, +), ADediting_1363116(75368419, +), ADediting_1363117(75368428, +), ADediting_1363118(75368446, +), ADediting_1363119(75368467, +), ADediting_1363120(75368512, +), ADediting_1363121(75368549, +), ADediting_1363122(75368552, +), ADediting_1363123(75368812, +), ADediting_1363124(75368835, +), ADediting_1363125(75368853, +), ADediting_1363126(75368890, +), ADediting_1363127(75368915, +), ADediting_1363128(75368917, +), ADediting_1363129(75368918, +), ADediting_1363130(75368937, +), ADediting_1363131(75368961, +), ADediting_1363132(75368980, +), ADediting_1363133(75368993, +), ADediting_1363134(75368997, +), ADediting_1363135(75369002, +), ADediting_1363136(75369018, +), ADediting_1363137(75369056, +), ADediting_1363138(75369057, +), ADediting_1363139(75369187, +), ADediting_1363140(75369226, +), ADediting_1363141(75369227, +), ADediting_1363142(75369233, +), ADediting_1363143(75369323, +), ADediting_1363144(75369352, +), ADediting_1363145(75369378, +), ADediting_1363146(75369395, +), ADediting_1363147(75369479, +), ADediting_1363148(75369526, +), ADediting_1363149(75369529, +), ADediting_1363150(75369530, +), ADediting_1363151(75369538, +), ADediting_1363152(75369543, +), ADediting_1363153(75369551, +), ADediting_1363154(75369552, +), ADediting_1363155(75369553, +), ADediting_1363156(75369560, +), ADediting_1363157(75369565, +), ADediting_1363158(75369853, +), ADediting_1363159(75369891, +), ADediting_1363160(75369913, +), ADediting_1363161(75370023, +), ADediting_1363162(75370037, +), ADediting_1363163(75370038, +), ADediting_1363164(75370694, +), ADediting_1363165(75370695, +), ADediting_1363166(75370972, +), ADediting_1363167(75370973, +), ADediting_1363168(75370996, +), ADediting_1363169(75371010, +), ADediting_1363170(75371041, +), ADediting_1363171(75371044, +), ADediting_1363172(75371054, +), ADediting_1363173(75371086, +), ADediting_1363174(75371087, +), ADediting_1363175(75371132, +), ADediting_1363176(75371139, +), ADediting_1363177(75371491, +), ADediting_1363178(75371512, +), ADediting_1363179(75371513, +), ADediting_1363180(75371650, +), ADediting_1363181(75371658, +), ADediting_1363182(75371668, +), ADediting_1363183(75371681, +), ADediting_1363184(75371704, +), ADediting_1363185(75371718, +), ADediting_1363186(75371720, +), ADediting_1363187(75372079, +), ADediting_1363188(75372109, +), ADediting_1363189(75372122, +), ADediting_1363190(75372127, +), ADediting_1363191(75372139, +), ADediting_1363192(75372228, +), ADediting_1363193(75372246, +), ADediting_1363194(75372269, +), ADediting_1363195(75372270, +), ADediting_1363196(75372282, +), ADediting_1363197(75372560, +), ADediting_1363198(75372572, +), ADediting_1363199(75372695, +), ADediting_1363200(75373310, +), ADediting_1363201(75373417, +), ADediting_1363202(75373437, +), ADediting_1363203(75373453, +), ADediting_1363204(75373463, +), ADediting_1363205(75373909, +), ADediting_1363206(75374050, +), ADediting_1363207(75374059, +), ADediting_1363208(75374078, +), ADediting_1363209(75374084, +), ADediting_1363210(75375512, +), ADediting_1363211(75375516, +), ADediting_1363212(75376293, +), ADediting_1363213(75376294, +), ADediting_1363214(75376761, +), ADediting_1363215(75377802, +), ADediting_1363216(75377819, +), ADediting_1363217(75377936, +), ADediting_1363218(75377937, +), ADediting_1363219(75377949, +), ADediting_1363220(75377962, +), ADediting_1363221(75377964, +), ADediting_1363222(75378164, +), ADediting_1363223(75378171, +), ADediting_1363224(75379650, +), ADediting_1363225(75379697, +), ADediting_1363226(75381306, +), ADediting_1363227(75381346, +), ADediting_1363228(75382899, +), ADediting_1363229(75382946, +), ADediting_1363230(75383058, +), ADediting_1363231(75383323, +), ADediting_1363232(75383340, +), ADediting_1363233(75383459, +), ADediting_1363234(75383460, +), ADediting_1363235(75383492, +), ADediting_1363236(75383500, +), ADediting_1363237(75383501, +), ADediting_1363238(75383508, +), ADediting_1363239(75383537, +), ADediting_1363240(75383545, +), ADediting_1363241(75383993, +), ADediting_1363242(75384005, +), ADediting_1363243(75384040, +), ADediting_1363244(75384088, +), ADediting_1363245(75384100, +), ADediting_1363246(75385414, +), ADediting_1363247(75385417, +), ADediting_1363248(75385440, +), ADediting_1363249(75385448, +), ADediting_1363250(75386174, +), ADediting_1363251(75386317, +), ADediting_1363252(75386331, +), ADediting_1363253(75386575, +), ADediting_1363254(75386600, +), ADediting_1363255(75386611, +), ADediting_1363256(75386713, +), ADediting_1363257(75387138, +), ADediting_1363258(75387146, +), ADediting_1363259(75387169, +), ADediting_1363260(75387173, +), ADediting_1363261(75387179, +), ADediting_1363262(75387192, +), ADediting_1363263(75387198, +), ADediting_1363264(75387199, +), ADediting_1363265(75387228, +), ADediting_1363266(75387238, +), ADediting_1363267(75387257, +), ADediting_1363268(75387277, +), ADediting_1363269(75387280, +), ADediting_1363270(75387317, +), ADediting_1363271(75387371, +), ADediting_1363272(75387427, +), ADediting_1363273(75387446, +), ADediting_1363274(75387464, +), ADediting_1363275(75388021, +), ADediting_1363276(75388022, +), ADediting_1363277(75388048, +), ADediting_1363278(75388061, +), ADediting_1363279(75388075, +), ADediting_1363280(75388076, +), ADediting_1363281(75388095, +), ADediting_1363282(75388135, +), ADediting_1363283(75391558, +), ADediting_1363284(75391597, +), ADediting_1363285(75391920, +), ADediting_1588676(75368209, +), ADediting_1588677(75369013, +), ADediting_1588678(75372041, +), ADediting_1588679(75383087, +), ADediting_1588680(75383101, +), ADediting_1588681(75386230, +), |
Top |
RNA editing positional annotations for STAG3L1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1363069 | chr7_75366589_+ | ncRNA_intronic |
| ADediting_1363070 | chr7_75367110_+ | ncRNA_intronic |
| ADediting_1363071 | chr7_75367120_+ | ncRNA_intronic |
| ADediting_1363072 | chr7_75367157_+ | ncRNA_intronic |
| ADediting_1363073 | chr7_75367163_+ | ncRNA_intronic |
| ADediting_1363074 | chr7_75367166_+ | ncRNA_intronic |
| ADediting_1363075 | chr7_75367180_+ | ncRNA_intronic |
| ADediting_1363076 | chr7_75367188_+ | ncRNA_intronic |
| ADediting_1363077 | chr7_75367192_+ | ncRNA_intronic |
| ADediting_1363078 | chr7_75367241_+ | ncRNA_intronic |
| ADediting_1363079 | chr7_75367242_+ | ncRNA_intronic |
| ADediting_1363080 | chr7_75367243_+ | ncRNA_intronic |
| ADediting_1363081 | chr7_75367709_+ | ncRNA_intronic |
| ADediting_1363082 | chr7_75367716_+ | ncRNA_intronic |
| ADediting_1363083 | chr7_75367735_+ | ncRNA_intronic |
| ADediting_1363084 | chr7_75367850_+ | ncRNA_intronic |
| ADediting_1363085 | chr7_75368097_+ | ncRNA_intronic |
| ADediting_1363086 | chr7_75368119_+ | ncRNA_intronic |
| ADediting_1363087 | chr7_75368124_+ | ncRNA_intronic |
| ADediting_1363088 | chr7_75368137_+ | ncRNA_intronic |
| ADediting_1363089 | chr7_75368138_+ | ncRNA_intronic |
| ADediting_1363090 | chr7_75368143_+ | ncRNA_intronic |
| ADediting_1363091 | chr7_75368149_+ | ncRNA_intronic |
| ADediting_1363092 | chr7_75368152_+ | ncRNA_intronic |
| ADediting_1363093 | chr7_75368153_+ | ncRNA_intronic |
| ADediting_1363094 | chr7_75368174_+ | ncRNA_intronic |
| ADediting_1363095 | chr7_75368179_+ | ncRNA_intronic |
| ADediting_1363096 | chr7_75368183_+ | ncRNA_intronic |
| ADediting_1363097 | chr7_75368191_+ | ncRNA_intronic |
| ADediting_1363098 | chr7_75368218_+ | ncRNA_intronic |
| ADediting_1363099 | chr7_75368227_+ | ncRNA_intronic |
| ADediting_1363100 | chr7_75368244_+ | ncRNA_intronic |
| ADediting_1363101 | chr7_75368250_+ | ncRNA_intronic |
| ADediting_1363102 | chr7_75368259_+ | ncRNA_intronic |
| ADediting_1363103 | chr7_75368283_+ | ncRNA_intronic |
| ADediting_1363104 | chr7_75368288_+ | ncRNA_intronic |
| ADediting_1363105 | chr7_75368290_+ | ncRNA_intronic |
| ADediting_1363106 | chr7_75368313_+ | ncRNA_intronic |
| ADediting_1363107 | chr7_75368328_+ | ncRNA_intronic |
| ADediting_1363108 | chr7_75368384_+ | ncRNA_intronic |
| ADediting_1363109 | chr7_75368385_+ | ncRNA_intronic |
| ADediting_1363110 | chr7_75368390_+ | ncRNA_intronic |
| ADediting_1363111 | chr7_75368392_+ | ncRNA_intronic |
| ADediting_1363112 | chr7_75368393_+ | ncRNA_intronic |
| ADediting_1363113 | chr7_75368406_+ | ncRNA_intronic |
| ADediting_1363114 | chr7_75368414_+ | ncRNA_intronic |
| ADediting_1363115 | chr7_75368415_+ | ncRNA_intronic |
| ADediting_1363116 | chr7_75368419_+ | ncRNA_intronic |
| ADediting_1363117 | chr7_75368428_+ | ncRNA_intronic |
| ADediting_1363118 | chr7_75368446_+ | ncRNA_intronic |
| ADediting_1363119 | chr7_75368467_+ | ncRNA_intronic |
| ADediting_1363120 | chr7_75368512_+ | ncRNA_intronic |
| ADediting_1363121 | chr7_75368549_+ | ncRNA_intronic |
| ADediting_1363122 | chr7_75368552_+ | ncRNA_intronic |
| ADediting_1363123 | chr7_75368812_+ | ncRNA_intronic |
| ADediting_1363124 | chr7_75368835_+ | ncRNA_intronic |
| ADediting_1363125 | chr7_75368853_+ | ncRNA_intronic |
| ADediting_1363126 | chr7_75368890_+ | ncRNA_intronic |
| ADediting_1363127 | chr7_75368915_+ | ncRNA_intronic |
| ADediting_1363128 | chr7_75368917_+ | ncRNA_intronic |
| ADediting_1363129 | chr7_75368918_+ | ncRNA_intronic |
| ADediting_1363130 | chr7_75368937_+ | ncRNA_intronic |
| ADediting_1363131 | chr7_75368961_+ | ncRNA_intronic |
| ADediting_1363132 | chr7_75368980_+ | ncRNA_intronic |
| ADediting_1363133 | chr7_75368993_+ | ncRNA_intronic |
| ADediting_1363134 | chr7_75368997_+ | ncRNA_intronic |
| ADediting_1363135 | chr7_75369002_+ | ncRNA_intronic |
| ADediting_1363136 | chr7_75369018_+ | ncRNA_intronic |
| ADediting_1363137 | chr7_75369056_+ | ncRNA_intronic |
| ADediting_1363138 | chr7_75369057_+ | ncRNA_intronic |
| ADediting_1363139 | chr7_75369187_+ | ncRNA_intronic |
| ADediting_1363140 | chr7_75369226_+ | ncRNA_intronic |
| ADediting_1363141 | chr7_75369227_+ | ncRNA_intronic |
| ADediting_1363142 | chr7_75369233_+ | ncRNA_intronic |
| ADediting_1363143 | chr7_75369323_+ | ncRNA_intronic |
| ADediting_1363144 | chr7_75369352_+ | ncRNA_intronic |
| ADediting_1363145 | chr7_75369378_+ | ncRNA_intronic |
| ADediting_1363146 | chr7_75369395_+ | ncRNA_intronic |
| ADediting_1363147 | chr7_75369479_+ | ncRNA_intronic |
| ADediting_1363148 | chr7_75369526_+ | ncRNA_intronic |
| ADediting_1363149 | chr7_75369529_+ | ncRNA_intronic |
| ADediting_1363150 | chr7_75369530_+ | ncRNA_intronic |
| ADediting_1363151 | chr7_75369538_+ | ncRNA_intronic |
| ADediting_1363152 | chr7_75369543_+ | ncRNA_intronic |
| ADediting_1363153 | chr7_75369551_+ | ncRNA_intronic |
| ADediting_1363154 | chr7_75369552_+ | ncRNA_intronic |
| ADediting_1363155 | chr7_75369553_+ | ncRNA_intronic |
| ADediting_1363156 | chr7_75369560_+ | ncRNA_intronic |
| ADediting_1363157 | chr7_75369565_+ | ncRNA_intronic |
| ADediting_1363158 | chr7_75369853_+ | ncRNA_intronic |
| ADediting_1363159 | chr7_75369891_+ | ncRNA_intronic |
| ADediting_1363160 | chr7_75369913_+ | ncRNA_intronic |
| ADediting_1363161 | chr7_75370023_+ | ncRNA_intronic |
| ADediting_1363162 | chr7_75370037_+ | ncRNA_intronic |
| ADediting_1363163 | chr7_75370038_+ | ncRNA_intronic |
| ADediting_1363164 | chr7_75370694_+ | ncRNA_intronic |
| ADediting_1363165 | chr7_75370695_+ | ncRNA_intronic |
| ADediting_1363166 | chr7_75370972_+ | ncRNA_intronic |
| ADediting_1363167 | chr7_75370973_+ | ncRNA_intronic |
| ADediting_1363168 | chr7_75370996_+ | ncRNA_intronic |
| ADediting_1363169 | chr7_75371010_+ | ncRNA_intronic |
| ADediting_1363170 | chr7_75371041_+ | ncRNA_intronic |
| ADediting_1363171 | chr7_75371044_+ | ncRNA_intronic |
| ADediting_1363172 | chr7_75371054_+ | ncRNA_intronic |
| ADediting_1363173 | chr7_75371086_+ | ncRNA_intronic |
| ADediting_1363174 | chr7_75371087_+ | ncRNA_intronic |
| ADediting_1363175 | chr7_75371132_+ | ncRNA_intronic |
| ADediting_1363176 | chr7_75371139_+ | ncRNA_intronic |
| ADediting_1363177 | chr7_75371491_+ | ncRNA_intronic |
| ADediting_1363178 | chr7_75371512_+ | ncRNA_intronic |
| ADediting_1363179 | chr7_75371513_+ | ncRNA_intronic |
| ADediting_1363180 | chr7_75371650_+ | ncRNA_intronic |
| ADediting_1363181 | chr7_75371658_+ | ncRNA_intronic |
| ADediting_1363182 | chr7_75371668_+ | ncRNA_intronic |
| ADediting_1363183 | chr7_75371681_+ | ncRNA_intronic |
| ADediting_1363184 | chr7_75371704_+ | ncRNA_intronic |
| ADediting_1363185 | chr7_75371718_+ | ncRNA_intronic |
| ADediting_1363186 | chr7_75371720_+ | ncRNA_intronic |
| ADediting_1363187 | chr7_75372079_+ | ncRNA_intronic |
| ADediting_1363188 | chr7_75372109_+ | ncRNA_intronic |
| ADediting_1363189 | chr7_75372122_+ | ncRNA_intronic |
| ADediting_1363190 | chr7_75372127_+ | ncRNA_intronic |
| ADediting_1363191 | chr7_75372139_+ | ncRNA_intronic |
| ADediting_1363192 | chr7_75372228_+ | ncRNA_intronic |
| ADediting_1363193 | chr7_75372246_+ | ncRNA_intronic |
| ADediting_1363194 | chr7_75372269_+ | ncRNA_intronic |
| ADediting_1363195 | chr7_75372270_+ | ncRNA_intronic |
| ADediting_1363196 | chr7_75372282_+ | ncRNA_intronic |
| ADediting_1363197 | chr7_75372560_+ | ncRNA_intronic |
| ADediting_1363198 | chr7_75372572_+ | ncRNA_intronic |
| ADediting_1363199 | chr7_75372695_+ | ncRNA_intronic |
| ADediting_1363200 | chr7_75373310_+ | ncRNA_intronic |
| ADediting_1363201 | chr7_75373417_+ | ncRNA_intronic |
| ADediting_1363202 | chr7_75373437_+ | ncRNA_intronic |
| ADediting_1363203 | chr7_75373453_+ | ncRNA_intronic |
| ADediting_1363204 | chr7_75373463_+ | ncRNA_intronic |
| ADediting_1363205 | chr7_75373909_+ | ncRNA_intronic |
| ADediting_1363206 | chr7_75374050_+ | ncRNA_intronic |
| ADediting_1363207 | chr7_75374059_+ | ncRNA_intronic |
| ADediting_1363208 | chr7_75374078_+ | ncRNA_intronic |
| ADediting_1363209 | chr7_75374084_+ | ncRNA_intronic |
| ADediting_1363210 | chr7_75375512_+ | ncRNA_intronic |
| ADediting_1363211 | chr7_75375516_+ | ncRNA_intronic |
| ADediting_1363212 | chr7_75376293_+ | ncRNA_intronic |
| ADediting_1363213 | chr7_75376294_+ | ncRNA_intronic |
| ADediting_1363214 | chr7_75376761_+ | ncRNA_intronic |
| ADediting_1363215 | chr7_75377802_+ | ncRNA_intronic |
| ADediting_1363216 | chr7_75377819_+ | ncRNA_intronic |
| ADediting_1363217 | chr7_75377936_+ | ncRNA_intronic |
| ADediting_1363218 | chr7_75377937_+ | ncRNA_intronic |
| ADediting_1363219 | chr7_75377949_+ | ncRNA_intronic |
| ADediting_1363220 | chr7_75377962_+ | ncRNA_intronic |
| ADediting_1363221 | chr7_75377964_+ | ncRNA_intronic |
| ADediting_1363222 | chr7_75378164_+ | ncRNA_intronic |
| ADediting_1363223 | chr7_75378171_+ | ncRNA_intronic |
| ADediting_1363224 | chr7_75379650_+ | ncRNA_intronic |
| ADediting_1363225 | chr7_75379697_+ | ncRNA_intronic |
| ADediting_1363226 | chr7_75381306_+ | ncRNA_intronic |
| ADediting_1363227 | chr7_75381346_+ | ncRNA_intronic |
| ADediting_1363228 | chr7_75382899_+ | ncRNA_intronic |
| ADediting_1363229 | chr7_75382946_+ | ncRNA_intronic |
| ADediting_1363230 | chr7_75383058_+ | ncRNA_intronic |
| ADediting_1363231 | chr7_75383323_+ | ncRNA_intronic |
| ADediting_1363232 | chr7_75383340_+ | ncRNA_intronic |
| ADediting_1363233 | chr7_75383459_+ | ncRNA_intronic |
| ADediting_1363234 | chr7_75383460_+ | ncRNA_intronic |
| ADediting_1363235 | chr7_75383492_+ | ncRNA_intronic |
| ADediting_1363236 | chr7_75383500_+ | ncRNA_intronic |
| ADediting_1363237 | chr7_75383501_+ | ncRNA_intronic |
| ADediting_1363238 | chr7_75383508_+ | ncRNA_intronic |
| ADediting_1363239 | chr7_75383537_+ | ncRNA_intronic |
| ADediting_1363240 | chr7_75383545_+ | ncRNA_intronic |
| ADediting_1363241 | chr7_75383993_+ | ncRNA_intronic |
| ADediting_1363242 | chr7_75384005_+ | ncRNA_intronic |
| ADediting_1363243 | chr7_75384040_+ | ncRNA_intronic |
| ADediting_1363244 | chr7_75384088_+ | ncRNA_intronic |
| ADediting_1363245 | chr7_75384100_+ | ncRNA_intronic |
| ADediting_1363246 | chr7_75385414_+ | ncRNA_intronic |
| ADediting_1363247 | chr7_75385417_+ | ncRNA_intronic |
| ADediting_1363248 | chr7_75385440_+ | ncRNA_intronic |
| ADediting_1363249 | chr7_75385448_+ | ncRNA_intronic |
| ADediting_1363250 | chr7_75386174_+ | ncRNA_intronic |
| ADediting_1363251 | chr7_75386317_+ | ncRNA_intronic |
| ADediting_1363252 | chr7_75386331_+ | ncRNA_intronic |
| ADediting_1363253 | chr7_75386575_+ | ncRNA_intronic |
| ADediting_1363254 | chr7_75386600_+ | ncRNA_intronic |
| ADediting_1363255 | chr7_75386611_+ | ncRNA_intronic |
| ADediting_1363256 | chr7_75386713_+ | ncRNA_intronic |
| ADediting_1363257 | chr7_75387138_+ | ncRNA_intronic |
| ADediting_1363258 | chr7_75387146_+ | ncRNA_intronic |
| ADediting_1363259 | chr7_75387169_+ | ncRNA_intronic |
| ADediting_1363260 | chr7_75387173_+ | ncRNA_intronic |
| ADediting_1363261 | chr7_75387179_+ | ncRNA_intronic |
| ADediting_1363262 | chr7_75387192_+ | ncRNA_intronic |
| ADediting_1363263 | chr7_75387198_+ | ncRNA_intronic |
| ADediting_1363264 | chr7_75387199_+ | ncRNA_intronic |
| ADediting_1363265 | chr7_75387228_+ | ncRNA_intronic |
| ADediting_1363266 | chr7_75387238_+ | ncRNA_intronic |
| ADediting_1363267 | chr7_75387257_+ | ncRNA_intronic |
| ADediting_1363268 | chr7_75387277_+ | ncRNA_intronic |
| ADediting_1363269 | chr7_75387280_+ | ncRNA_intronic |
| ADediting_1363270 | chr7_75387317_+ | ncRNA_intronic |
| ADediting_1363271 | chr7_75387371_+ | ncRNA_intronic |
| ADediting_1363272 | chr7_75387427_+ | ncRNA_intronic |
| ADediting_1363273 | chr7_75387446_+ | ncRNA_intronic |
| ADediting_1363274 | chr7_75387464_+ | ncRNA_intronic |
| ADediting_1363275 | chr7_75388021_+ | ncRNA_intronic |
| ADediting_1363276 | chr7_75388022_+ | ncRNA_intronic |
| ADediting_1363277 | chr7_75388048_+ | ncRNA_intronic |
| ADediting_1363278 | chr7_75388061_+ | ncRNA_intronic |
| ADediting_1363279 | chr7_75388075_+ | ncRNA_intronic |
| ADediting_1363280 | chr7_75388076_+ | ncRNA_intronic |
| ADediting_1363281 | chr7_75388095_+ | ncRNA_intronic |
| ADediting_1363282 | chr7_75388135_+ | ncRNA_intronic |
| ADediting_1363283 | chr7_75391558_+ | ncRNA_intronic |
| ADediting_1363284 | chr7_75391597_+ | ncRNA_intronic |
| ADediting_1363285 | chr7_75391920_+ | ncRNA_intronic |
| ADediting_1588676 | chr7_75368209_+ | ncRNA_intronic |
| ADediting_1588677 | chr7_75369013_+ | ncRNA_intronic |
| ADediting_1588678 | chr7_75372041_+ | ncRNA_intronic |
| ADediting_1588679 | chr7_75383087_+ | ncRNA_intronic |
| ADediting_1588680 | chr7_75383101_+ | ncRNA_intronic |
| ADediting_1588681 | chr7_75386230_+ | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1363069 | chr7_75366589_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1363070 | chr7_75367110_+ | SINE | Alu | Name=AluY |
| ADediting_1363071 | chr7_75367120_+ | SINE | Alu | Name=AluY |
| ADediting_1363072 | chr7_75367157_+ | SINE | Alu | Name=AluY |
| ADediting_1363073 | chr7_75367163_+ | SINE | Alu | Name=AluY |
| ADediting_1363074 | chr7_75367166_+ | SINE | Alu | Name=AluY |
| ADediting_1363075 | chr7_75367180_+ | SINE | Alu | Name=AluY |
| ADediting_1363076 | chr7_75367188_+ | SINE | Alu | Name=AluY |
| ADediting_1363077 | chr7_75367192_+ | SINE | Alu | Name=AluY |
| ADediting_1363078 | chr7_75367241_+ | SINE | Alu | Name=AluY |
| ADediting_1363079 | chr7_75367242_+ | SINE | Alu | Name=AluY |
| ADediting_1363080 | chr7_75367243_+ | SINE | Alu | Name=AluY |
| ADediting_1363081 | chr7_75367709_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363082 | chr7_75367716_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363083 | chr7_75367735_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363084 | chr7_75367850_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363085 | chr7_75368097_+ | SINE | Alu | Name=AluSp |
| ADediting_1363086 | chr7_75368119_+ | SINE | Alu | Name=AluSp |
| ADediting_1363087 | chr7_75368124_+ | SINE | Alu | Name=AluSp |
| ADediting_1363088 | chr7_75368137_+ | SINE | Alu | Name=AluSp |
| ADediting_1363089 | chr7_75368138_+ | SINE | Alu | Name=AluSp |
| ADediting_1363090 | chr7_75368143_+ | SINE | Alu | Name=AluSp |
| ADediting_1363091 | chr7_75368149_+ | SINE | Alu | Name=AluSp |
| ADediting_1363092 | chr7_75368152_+ | SINE | Alu | Name=AluSp |
| ADediting_1363093 | chr7_75368153_+ | SINE | Alu | Name=AluSp |
| ADediting_1363094 | chr7_75368174_+ | SINE | Alu | Name=AluSp |
| ADediting_1363095 | chr7_75368179_+ | SINE | Alu | Name=AluSp |
| ADediting_1363096 | chr7_75368183_+ | SINE | Alu | Name=AluSp |
| ADediting_1363097 | chr7_75368191_+ | SINE | Alu | Name=AluSp |
| ADediting_1363098 | chr7_75368218_+ | SINE | Alu | Name=AluSp |
| ADediting_1363099 | chr7_75368227_+ | SINE | Alu | Name=AluSp |
| ADediting_1363100 | chr7_75368244_+ | SINE | Alu | Name=AluSp |
| ADediting_1363101 | chr7_75368250_+ | SINE | Alu | Name=AluSp |
| ADediting_1363102 | chr7_75368259_+ | SINE | Alu | Name=AluSp |
| ADediting_1363103 | chr7_75368283_+ | SINE | Alu | Name=AluSp |
| ADediting_1363104 | chr7_75368288_+ | SINE | Alu | Name=AluSp |
| ADediting_1363105 | chr7_75368290_+ | SINE | Alu | Name=AluSp |
| ADediting_1363106 | chr7_75368313_+ | SINE | Alu | Name=AluSp |
| ADediting_1363107 | chr7_75368328_+ | SINE | Alu | Name=AluSp |
| ADediting_1363108 | chr7_75368384_+ | SINE | Alu | Name=AluJr |
| ADediting_1363109 | chr7_75368385_+ | SINE | Alu | Name=AluJr |
| ADediting_1363110 | chr7_75368390_+ | SINE | Alu | Name=AluJr |
| ADediting_1363111 | chr7_75368392_+ | SINE | Alu | Name=AluJr |
| ADediting_1363112 | chr7_75368393_+ | SINE | Alu | Name=AluJr |
| ADediting_1363113 | chr7_75368406_+ | SINE | Alu | Name=AluJr |
| ADediting_1363114 | chr7_75368414_+ | SINE | Alu | Name=AluJr |
| ADediting_1363115 | chr7_75368415_+ | SINE | Alu | Name=AluJr |
| ADediting_1363116 | chr7_75368419_+ | SINE | Alu | Name=AluJr |
| ADediting_1363117 | chr7_75368428_+ | SINE | Alu | Name=AluJr |
| ADediting_1363118 | chr7_75368446_+ | SINE | Alu | Name=AluJr |
| ADediting_1363119 | chr7_75368467_+ | SINE | Alu | Name=AluJr |
| ADediting_1363120 | chr7_75368512_+ | SINE | Alu | Name=AluJr |
| ADediting_1363121 | chr7_75368549_+ | SINE | Alu | Name=AluJr |
| ADediting_1363122 | chr7_75368552_+ | SINE | Alu | Name=AluJr |
| ADediting_1363123 | chr7_75368812_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363124 | chr7_75368835_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363125 | chr7_75368853_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363126 | chr7_75368890_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363127 | chr7_75368915_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363128 | chr7_75368917_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363129 | chr7_75368918_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363130 | chr7_75368937_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363131 | chr7_75368961_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363132 | chr7_75368980_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363133 | chr7_75368993_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363134 | chr7_75368997_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363135 | chr7_75369002_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363136 | chr7_75369018_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363137 | chr7_75369056_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363138 | chr7_75369057_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363139 | chr7_75369187_+ | SINE | Alu | Name=AluSz |
| ADediting_1363140 | chr7_75369226_+ | SINE | Alu | Name=AluSz |
| ADediting_1363141 | chr7_75369227_+ | SINE | Alu | Name=AluSz |
| ADediting_1363142 | chr7_75369233_+ | SINE | Alu | Name=AluSz |
| ADediting_1363143 | chr7_75369323_+ | SINE | Alu | Name=AluSz |
| ADediting_1363144 | chr7_75369352_+ | SINE | Alu | Name=AluSz |
| ADediting_1363145 | chr7_75369378_+ | SINE | Alu | Name=AluSz |
| ADediting_1363146 | chr7_75369395_+ | SINE | Alu | Name=AluSz |
| ADediting_1363147 | chr7_75369479_+ | SINE | Alu | Name=FRAM |
| ADediting_1363148 | chr7_75369526_+ | SINE | Alu | Name=FRAM |
| ADediting_1363149 | chr7_75369529_+ | SINE | Alu | Name=FRAM |
| ADediting_1363150 | chr7_75369530_+ | SINE | Alu | Name=FRAM |
| ADediting_1363151 | chr7_75369538_+ | SINE | Alu | Name=FRAM |
| ADediting_1363152 | chr7_75369543_+ | SINE | Alu | Name=FRAM |
| ADediting_1363153 | chr7_75369551_+ | SINE | Alu | Name=FRAM |
| ADediting_1363154 | chr7_75369552_+ | SINE | Alu | Name=FRAM |
| ADediting_1363155 | chr7_75369553_+ | SINE | Alu | Name=FRAM |
| ADediting_1363156 | chr7_75369560_+ | SINE | Alu | Name=FRAM |
| ADediting_1363157 | chr7_75369565_+ | SINE | Alu | Name=FRAM |
| ADediting_1363158 | chr7_75369853_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1363159 | chr7_75369891_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1363160 | chr7_75369913_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1363161 | chr7_75370023_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1363162 | chr7_75370037_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1363163 | chr7_75370038_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1363164 | chr7_75370694_+ | SINE | Alu | Name=AluJo |
| ADediting_1363165 | chr7_75370695_+ | SINE | Alu | Name=AluJo |
| ADediting_1363166 | chr7_75370972_+ | SINE | Alu | Name=AluSp |
| ADediting_1363167 | chr7_75370973_+ | SINE | Alu | Name=AluSp |
| ADediting_1363168 | chr7_75370996_+ | SINE | Alu | Name=AluSp |
| ADediting_1363169 | chr7_75371010_+ | SINE | Alu | Name=AluSp |
| ADediting_1363170 | chr7_75371041_+ | SINE | Alu | Name=AluSp |
| ADediting_1363171 | chr7_75371044_+ | SINE | Alu | Name=AluSp |
| ADediting_1363172 | chr7_75371054_+ | SINE | Alu | Name=AluSp |
| ADediting_1363173 | chr7_75371086_+ | SINE | Alu | Name=AluSp |
| ADediting_1363174 | chr7_75371087_+ | SINE | Alu | Name=AluSp |
| ADediting_1363175 | chr7_75371132_+ | SINE | Alu | Name=AluSp |
| ADediting_1363176 | chr7_75371139_+ | SINE | Alu | Name=AluSp |
| ADediting_1363177 | chr7_75371491_+ | SINE | Alu | Name=AluJb |
| ADediting_1363178 | chr7_75371512_+ | SINE | Alu | Name=AluJb |
| ADediting_1363179 | chr7_75371513_+ | SINE | Alu | Name=AluJb |
| ADediting_1363180 | chr7_75371650_+ | SINE | Alu | Name=AluJb |
| ADediting_1363181 | chr7_75371658_+ | SINE | Alu | Name=AluJb |
| ADediting_1363182 | chr7_75371668_+ | SINE | Alu | Name=AluJb |
| ADediting_1363183 | chr7_75371681_+ | SINE | Alu | Name=AluJb |
| ADediting_1363184 | chr7_75371704_+ | SINE | Alu | Name=AluJb |
| ADediting_1363185 | chr7_75371718_+ | SINE | Alu | Name=AluJb |
| ADediting_1363186 | chr7_75371720_+ | SINE | Alu | Name=AluJb |
| ADediting_1363187 | chr7_75372079_+ | SINE | Alu | Name=AluJr |
| ADediting_1363188 | chr7_75372109_+ | SINE | Alu | Name=AluJr |
| ADediting_1363189 | chr7_75372122_+ | SINE | Alu | Name=AluJr |
| ADediting_1363190 | chr7_75372127_+ | SINE | Alu | Name=AluJr |
| ADediting_1363191 | chr7_75372139_+ | SINE | Alu | Name=AluJr |
| ADediting_1363192 | chr7_75372228_+ | SINE | Alu | Name=AluJr |
| ADediting_1363193 | chr7_75372246_+ | SINE | Alu | Name=AluJr |
| ADediting_1363194 | chr7_75372269_+ | SINE | Alu | Name=AluJr |
| ADediting_1363195 | chr7_75372270_+ | SINE | Alu | Name=AluJr |
| ADediting_1363196 | chr7_75372282_+ | SINE | Alu | Name=AluJr |
| ADediting_1363197 | chr7_75372560_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363198 | chr7_75372572_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363199 | chr7_75372695_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363200 | chr7_75373310_+ | SINE | Alu | Name=AluSz |
| ADediting_1363201 | chr7_75373417_+ | SINE | Alu | Name=AluSz |
| ADediting_1363202 | chr7_75373437_+ | SINE | Alu | Name=AluSz |
| ADediting_1363203 | chr7_75373453_+ | SINE | Alu | Name=AluSz |
| ADediting_1363204 | chr7_75373463_+ | SINE | Alu | Name=AluSz |
| ADediting_1363205 | chr7_75373909_+ | SINE | Alu | Name=AluSq |
| ADediting_1363206 | chr7_75374050_+ | SINE | Alu | Name=AluSq |
| ADediting_1363207 | chr7_75374059_+ | SINE | Alu | Name=AluSq |
| ADediting_1363208 | chr7_75374078_+ | SINE | Alu | Name=AluSq |
| ADediting_1363209 | chr7_75374084_+ | SINE | Alu | Name=AluSq |
| ADediting_1363210 | chr7_75375512_+ | SINE | Alu | Name=AluSz |
| ADediting_1363211 | chr7_75375516_+ | SINE | Alu | Name=AluSz |
| ADediting_1363212 | chr7_75376293_+ | SINE | Alu | Name=AluSz |
| ADediting_1363213 | chr7_75376294_+ | SINE | Alu | Name=AluSz |
| ADediting_1363214 | chr7_75376761_+ | SINE | Alu | Name=AluSz |
| ADediting_1363215 | chr7_75377802_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363216 | chr7_75377819_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363217 | chr7_75377936_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363218 | chr7_75377937_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363219 | chr7_75377949_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363220 | chr7_75377962_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363221 | chr7_75377964_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363222 | chr7_75378164_+ | SINE | Alu | Name=AluJr |
| ADediting_1363223 | chr7_75378171_+ | SINE | Alu | Name=AluJr |
| ADediting_1363224 | chr7_75379650_+ | SINE | Alu | Name=AluSp |
| ADediting_1363225 | chr7_75379697_+ | SINE | Alu | Name=AluSx |
| ADediting_1363226 | chr7_75381306_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363227 | chr7_75381346_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363228 | chr7_75382899_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363229 | chr7_75382946_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363230 | chr7_75383058_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363231 | chr7_75383323_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363232 | chr7_75383340_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363233 | chr7_75383459_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363234 | chr7_75383460_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363235 | chr7_75383492_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363236 | chr7_75383500_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363237 | chr7_75383501_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363238 | chr7_75383508_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363239 | chr7_75383537_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363240 | chr7_75383545_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1363241 | chr7_75383993_+ | SINE | Alu | Name=AluSz |
| ADediting_1363242 | chr7_75384005_+ | SINE | Alu | Name=AluSz |
| ADediting_1363243 | chr7_75384040_+ | SINE | Alu | Name=AluSz |
| ADediting_1363244 | chr7_75384088_+ | SINE | Alu | Name=AluSz |
| ADediting_1363245 | chr7_75384100_+ | SINE | Alu | Name=AluSz |
| ADediting_1363246 | chr7_75385414_+ | SINE | Alu | Name=AluSz |
| ADediting_1363247 | chr7_75385417_+ | SINE | Alu | Name=AluSz |
| ADediting_1363248 | chr7_75385440_+ | SINE | Alu | Name=AluSz |
| ADediting_1363249 | chr7_75385448_+ | SINE | Alu | Name=AluSz |
| ADediting_1363250 | chr7_75386174_+ | SINE | Alu | Name=AluSx |
| ADediting_1363251 | chr7_75386317_+ | SINE | Alu | Name=AluSx |
| ADediting_1363252 | chr7_75386331_+ | SINE | Alu | Name=AluSx |
| ADediting_1363253 | chr7_75386575_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363254 | chr7_75386600_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363255 | chr7_75386611_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363256 | chr7_75386713_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363257 | chr7_75387138_+ | SINE | Alu | Name=AluSx |
| ADediting_1363258 | chr7_75387146_+ | SINE | Alu | Name=AluSx |
| ADediting_1363259 | chr7_75387169_+ | SINE | Alu | Name=AluSx |
| ADediting_1363260 | chr7_75387173_+ | SINE | Alu | Name=AluSx |
| ADediting_1363261 | chr7_75387179_+ | SINE | Alu | Name=AluSx |
| ADediting_1363262 | chr7_75387192_+ | SINE | Alu | Name=AluSx |
| ADediting_1363263 | chr7_75387198_+ | SINE | Alu | Name=AluSx |
| ADediting_1363264 | chr7_75387199_+ | SINE | Alu | Name=AluSx |
| ADediting_1363265 | chr7_75387228_+ | SINE | Alu | Name=AluSx |
| ADediting_1363266 | chr7_75387238_+ | SINE | Alu | Name=AluSx |
| ADediting_1363267 | chr7_75387257_+ | SINE | Alu | Name=AluSx |
| ADediting_1363268 | chr7_75387277_+ | SINE | Alu | Name=AluSx |
| ADediting_1363269 | chr7_75387280_+ | SINE | Alu | Name=AluSx |
| ADediting_1363270 | chr7_75387317_+ | SINE | Alu | Name=AluSx |
| ADediting_1363271 | chr7_75387371_+ | SINE | Alu | Name=AluSx |
| ADediting_1363272 | chr7_75387427_+ | SINE | Alu | Name=AluJo |
| ADediting_1363273 | chr7_75387446_+ | SINE | Alu | Name=AluJo |
| ADediting_1363274 | chr7_75387464_+ | SINE | Alu | Name=AluJo |
| ADediting_1363275 | chr7_75388021_+ | SINE | Alu | Name=AluJr |
| ADediting_1363276 | chr7_75388022_+ | SINE | Alu | Name=AluJr |
| ADediting_1363277 | chr7_75388048_+ | SINE | Alu | Name=AluJr |
| ADediting_1363278 | chr7_75388061_+ | SINE | Alu | Name=AluJr |
| ADediting_1363279 | chr7_75388075_+ | SINE | Alu | Name=AluJr |
| ADediting_1363280 | chr7_75388076_+ | SINE | Alu | Name=AluJr |
| ADediting_1363281 | chr7_75388095_+ | SINE | Alu | Name=AluJr |
| ADediting_1363282 | chr7_75388135_+ | SINE | Alu | Name=AluJr |
| ADediting_1363283 | chr7_75391558_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363284 | chr7_75391597_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1363285 | chr7_75391920_+ | SINE | Alu | Name=AluJr |
| ADediting_1588676 | chr7_75368209_+ | SINE | Alu | Name=AluSp |
| ADediting_1588677 | chr7_75369013_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1588678 | chr7_75372041_+ | SINE | Alu | Name=AluJr |
| ADediting_1588679 | chr7_75383087_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1588680 | chr7_75383101_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1588681 | chr7_75386230_+ | SINE | Alu | Name=AluSx |
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RNA A-to-I editing events in the alternative splicing sites for STAG3L1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STAG3L1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for STAG3L1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for STAG3L1 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for STAG3L1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for STAG3L1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1363073 | chr7_75367163_+ | 0.374566155947764 | 0.0506044386501996 | 0.839318853795436 | 0.0115625931853301 | 4.25506632119734e-11 | 0.363167215078372 |
| DLPFC | ADediting_1363074 | chr7_75367166_+ | 0.887373216615143 | 0.00807647114902133 | 0.351091541600308 | -0.053138211363075 | 1.01294885150061e-09 | 0.337979367718622 |
| CER | ADediting_1363117 | chr7_75368428_+ | 0.000268738547796301 | 0.293387461977655 | 2.71659281402955e-05 | 0.335429492369794 | 0.538010792144915 | 0.0506733933387607 |
| TCX | ADediting_1363119 | chr7_75368467_+ | 0.0285098868086832 | 0.178880384154547 | 4.89169247026552e-07 | 0.397049028284195 | 0.000671801757501227 | -0.274616129564506 |
| DLPFC | ADediting_1363134 | chr7_75368997_+ | 0.0795220125796491 | 0.0997446383495827 | 0.978578198546116 | 0.00153124615736882 | 7.01859136624174e-11 | 0.359335558284638 |
| DLPFC | ADediting_1363199 | chr7_75372695_+ | 0.15349226986807 | 0.0812595766376158 | 0.767154836064227 | 0.0168842759340627 | 1.96413933799268e-08 | 0.312173917949578 |
| DLPFC | ADediting_1363205 | chr7_75373909_+ | 0.386280417031257 | 0.0493766695419645 | 0.181595754282038 | -0.0760689523812023 | 7.11080754578636e-16 | 0.436805999113185 |
| DLPFC | ADediting_1363213 | chr7_75376294_+ | 0.557081942309409 | 0.0334755421151673 | 0.629714607809449 | -0.0274889365807031 | 4.16172051464047e-08 | 0.30523068941756 |
| DLPFC | ADediting_1363224 | chr7_75379650_+ | 0.240019779947925 | 0.0669274825170219 | 0.803027247832703 | -0.0142234833512308 | 5.96647572870165e-11 | 0.360584604433828 |
| DLPFC | ADediting_1363259 | chr7_75387169_+ | 0.472637461813533 | 0.0409389774188256 | 0.195837637788113 | -0.0736636887832968 | 1.73990608792597e-09 | 0.333447176770412 |
| DLPFC | ADediting_1363265 | chr7_75387228_+ | 0.894755808971575 | 0.00754387155076864 | 0.0758202985717474 | -0.100989946009761 | 4.10783575048388e-09 | 0.326094512423372 |
| DLPFC | ADediting_1363273 | chr7_75387446_+ | 0.536841625030936 | 0.0352084568152315 | 0.0791214670793023 | -0.099877093103696 | 3.26123618522792e-10 | 0.347243502338714 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 8.83554542722193e-16 | 0.435514235746608 | 7.41082826574118e-24 | 0.530052358600895 | 6.032053455897e-08 | 0.301730799764154 |
| PCC | 4.77343043511003e-06 | 0.324146368802764 | 5.38001490514542e-05 | 0.287892703023003 | 6.43355283364626e-06 | 0.319928026698254 |
| CER | 2.01468141037066e-16 | 0.606263852144969 | 1.40715810997096e-07 | 0.413860465808093 | 0.444411373545204 | 0.0629071842699476 |
| TCX | 1.69847016332024e-07 | 0.411380066670208 | 0.00798621533824012 | 0.215834681101126 | 1.01749257900538e-07 | 0.418088327880544 |
| FP | 5.58148514292274e-26 | 0.684854175276828 | 4.58498457964244e-17 | 0.575175695635032 | 6.52814568632637e-07 | 0.362665839717095 |
| IFG | 0.00108638553943127 | 0.61434308441667 | 0.0016020535999558 | 0.597747709898665 | 0.00169987401147189 | 0.595134476992826 |
| PG | 0.000159744716336106 | 0.273377361155351 | 2.2709070805256e-06 | 0.338636597331506 | 0.0723333028709425 | 0.132076033421488 |
| STG | 1.18212201347261e-07 | 0.539580082053005 | 2.47435433246821e-07 | 0.527843351388914 | 0.0116645381810716 | 0.274004609008275 |
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Relation with AD stages for STAG3L1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1363106 | chr7_75368313_+ | 0.00123710006501613 | 0.306860672217975 |
| IFG | ADediting_1363121 | chr7_75368549_+ | 0.00296043434924361 | 0.569552371330888 |
| IFG | ADediting_1363122 | chr7_75368552_+ | 0.0112614191895443 | 0.498187153213234 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for STAG3L1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for STAG3L1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| STAG3L1 | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
| STAG3L1 | C0036095 | Salivary Gland Neoplasms | 1 | CTD_human |
| STAG3L1 | C0220636 | Malignant neoplasm of salivary gland | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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