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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for PGGT1B |
 Gene summary |
| Gene information | Gene symbol | PGGT1B | Gene ID | 5229 |
| Gene name | protein geranylgeranyltransferase type I subunit beta | |
| Synonyms | BGGI|GGTI | |
| Cytomap | 5q22.3 | |
| Type of gene | protein-coding | |
| Description | geranylgeranyl transferase type-1 subunit betaCTC-428G20.3GGTase-I-betageranylgeranyl transferase type I subunit betageranylgeranyltransferase type I beta subunitprotein geranylgeranyltransferase type I, beta subunittype I protein geranyl-geranyltra | |
| Modification date | 20200313 | |
| UniProtAcc | P53609, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| PGGT1B | GO:0018344 | protein geranylgeranylation | 16893176 |
Top |
RNA A-to-I events for PGGT1B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1159653(115205821, -), ADediting_1159654(115205822, -), ADediting_1159655(115205823, -), ADediting_1159656(115205824, -), ADediting_1159657(115205836, -), ADediting_1159658(115205840, -), ADediting_1159659(115205841, -), ADediting_1159660(115205843, -), ADediting_1159661(115205845, -), ADediting_1159662(115205847, -), ADediting_1159663(115205851, -), ADediting_1159664(115205852, -), ADediting_1159665(115205869, -), ADediting_1159666(115205876, -), ADediting_1159667(115205877, -), ADediting_1159668(115205879, -), ADediting_1159669(115205883, -), ADediting_1159670(115205884, -), ADediting_1159671(115205885, -), ADediting_1159672(115205886, -), ADediting_1159673(115205895, -), ADediting_1159674(115205904, -), ADediting_1159675(115205906, -), ADediting_1159676(115205907, -), ADediting_1159677(115205908, -), ADediting_1159678(115205909, -), ADediting_1159679(115205912, -), ADediting_1159680(115205915, -), ADediting_1159681(115205916, -), ADediting_1159682(115205918, -), ADediting_1159683(115205925, -), ADediting_1159684(115205967, -), ADediting_1159685(115206004, -), ADediting_1159686(115206005, -), ADediting_1159687(115206017, -), ADediting_1159688(115206020, -), ADediting_1159689(115206031, -), ADediting_1159690(115206036, -), ADediting_1159691(115206038, -), ADediting_1159692(115206042, -), ADediting_1159693(115206044, -), ADediting_1159694(115206058, -), ADediting_1159695(115206616, -), ADediting_1159696(115206621, -), ADediting_1159697(115206627, -), ADediting_1159698(115206632, -), ADediting_1159699(115206635, -), ADediting_1159700(115206637, -), ADediting_1159701(115206642, -), ADediting_1159702(115206647, -), ADediting_1159703(115206651, -), ADediting_1159704(115206667, -), ADediting_1159705(115206668, -), ADediting_1159706(115206672, -), ADediting_1159707(115206680, -), ADediting_1159708(115206681, -), ADediting_1159709(115206689, -), ADediting_1159710(115206691, -), ADediting_1159711(115206695, -), ADediting_1159712(115206697, -), ADediting_1159713(115206702, -), ADediting_1159714(115206705, -), ADediting_1159715(115206706, -), ADediting_1159716(115206712, -), ADediting_1159717(115206714, -), ADediting_1159718(115206716, -), ADediting_1159719(115206719, -), ADediting_1159720(115206720, -), ADediting_1159721(115206724, -), ADediting_1159722(115206726, -), ADediting_1159723(115206727, -), ADediting_1159724(115206728, -), ADediting_1159725(115206734, -), ADediting_1159726(115206735, -), ADediting_1159727(115206736, -), ADediting_1159728(115206738, -), ADediting_1159729(115206739, -), ADediting_1159730(115206740, -), ADediting_1159731(115206745, -), ADediting_1159732(115206751, -), ADediting_1159733(115206753, -), ADediting_1159734(115206757, -), ADediting_1159735(115206764, -), ADediting_1159736(115206768, -), ADediting_1159737(115206780, -), ADediting_1159738(115206782, -), ADediting_1159739(115206789, -), ADediting_1159740(115206790, -), ADediting_1159741(115206791, -), ADediting_1159742(115244209, -), ADediting_1159743(115244276, -), ADediting_1159744(115244365, -), ADediting_1159745(115244402, -), ADediting_1159746(115244459, -), ADediting_1159747(115244654, -), ADediting_1159748(115244742, -), ADediting_1159749(115244770, -), ADediting_1159750(115244773, -), ADediting_1159751(115244794, -), ADediting_1159752(115244795, -), ADediting_1159753(115244804, -), ADediting_1159754(115244814, -), ADediting_1159755(115244818, -), ADediting_1159756(115244833, -), ADediting_1159757(115244837, -), ADediting_1159758(115244842, -), ADediting_1159759(115244863, -), ADediting_1159760(115244864, -), ADediting_1578742(115205853, -), ADediting_1578743(115205893, -), ADediting_1578744(115205910, -), ADediting_1578745(115238358, -), |
Top |
RNA editing positional annotations for PGGT1B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1159653 | chr5_115205821_- | UTR3 |
| ADediting_1159654 | chr5_115205822_- | UTR3 |
| ADediting_1159655 | chr5_115205823_- | UTR3 |
| ADediting_1159656 | chr5_115205824_- | UTR3 |
| ADediting_1159657 | chr5_115205836_- | UTR3 |
| ADediting_1159658 | chr5_115205840_- | UTR3 |
| ADediting_1159659 | chr5_115205841_- | UTR3 |
| ADediting_1159660 | chr5_115205843_- | UTR3 |
| ADediting_1159661 | chr5_115205845_- | UTR3 |
| ADediting_1159662 | chr5_115205847_- | UTR3 |
| ADediting_1159663 | chr5_115205851_- | UTR3 |
| ADediting_1159664 | chr5_115205852_- | UTR3 |
| ADediting_1159665 | chr5_115205869_- | UTR3 |
| ADediting_1159666 | chr5_115205876_- | UTR3 |
| ADediting_1159667 | chr5_115205877_- | UTR3 |
| ADediting_1159668 | chr5_115205879_- | UTR3 |
| ADediting_1159669 | chr5_115205883_- | UTR3 |
| ADediting_1159670 | chr5_115205884_- | UTR3 |
| ADediting_1159671 | chr5_115205885_- | UTR3 |
| ADediting_1159672 | chr5_115205886_- | UTR3 |
| ADediting_1159673 | chr5_115205895_- | UTR3 |
| ADediting_1159674 | chr5_115205904_- | UTR3 |
| ADediting_1159675 | chr5_115205906_- | UTR3 |
| ADediting_1159676 | chr5_115205907_- | UTR3 |
| ADediting_1159677 | chr5_115205908_- | UTR3 |
| ADediting_1159678 | chr5_115205909_- | UTR3 |
| ADediting_1159679 | chr5_115205912_- | UTR3 |
| ADediting_1159680 | chr5_115205915_- | UTR3 |
| ADediting_1159681 | chr5_115205916_- | UTR3 |
| ADediting_1159682 | chr5_115205918_- | UTR3 |
| ADediting_1159683 | chr5_115205925_- | UTR3 |
| ADediting_1159684 | chr5_115205967_- | UTR3 |
| ADediting_1159685 | chr5_115206004_- | UTR3 |
| ADediting_1159686 | chr5_115206005_- | UTR3 |
| ADediting_1159687 | chr5_115206017_- | UTR3 |
| ADediting_1159688 | chr5_115206020_- | UTR3 |
| ADediting_1159689 | chr5_115206031_- | UTR3 |
| ADediting_1159690 | chr5_115206036_- | UTR3 |
| ADediting_1159691 | chr5_115206038_- | UTR3 |
| ADediting_1159692 | chr5_115206042_- | UTR3 |
| ADediting_1159693 | chr5_115206044_- | UTR3 |
| ADediting_1159694 | chr5_115206058_- | UTR3 |
| ADediting_1159695 | chr5_115206616_- | UTR3 |
| ADediting_1159696 | chr5_115206621_- | UTR3 |
| ADediting_1159697 | chr5_115206627_- | UTR3 |
| ADediting_1159698 | chr5_115206632_- | UTR3 |
| ADediting_1159699 | chr5_115206635_- | UTR3 |
| ADediting_1159700 | chr5_115206637_- | UTR3 |
| ADediting_1159701 | chr5_115206642_- | UTR3 |
| ADediting_1159702 | chr5_115206647_- | UTR3 |
| ADediting_1159703 | chr5_115206651_- | UTR3 |
| ADediting_1159704 | chr5_115206667_- | UTR3 |
| ADediting_1159705 | chr5_115206668_- | UTR3 |
| ADediting_1159706 | chr5_115206672_- | UTR3 |
| ADediting_1159707 | chr5_115206680_- | UTR3 |
| ADediting_1159708 | chr5_115206681_- | UTR3 |
| ADediting_1159709 | chr5_115206689_- | UTR3 |
| ADediting_1159710 | chr5_115206691_- | UTR3 |
| ADediting_1159711 | chr5_115206695_- | UTR3 |
| ADediting_1159712 | chr5_115206697_- | UTR3 |
| ADediting_1159713 | chr5_115206702_- | UTR3 |
| ADediting_1159714 | chr5_115206705_- | UTR3 |
| ADediting_1159715 | chr5_115206706_- | UTR3 |
| ADediting_1159716 | chr5_115206712_- | UTR3 |
| ADediting_1159717 | chr5_115206714_- | UTR3 |
| ADediting_1159718 | chr5_115206716_- | UTR3 |
| ADediting_1159719 | chr5_115206719_- | UTR3 |
| ADediting_1159720 | chr5_115206720_- | UTR3 |
| ADediting_1159721 | chr5_115206724_- | UTR3 |
| ADediting_1159722 | chr5_115206726_- | UTR3 |
| ADediting_1159723 | chr5_115206727_- | UTR3 |
| ADediting_1159724 | chr5_115206728_- | UTR3 |
| ADediting_1159725 | chr5_115206734_- | UTR3 |
| ADediting_1159726 | chr5_115206735_- | UTR3 |
| ADediting_1159727 | chr5_115206736_- | UTR3 |
| ADediting_1159728 | chr5_115206738_- | UTR3 |
| ADediting_1159729 | chr5_115206739_- | UTR3 |
| ADediting_1159730 | chr5_115206740_- | UTR3 |
| ADediting_1159731 | chr5_115206745_- | UTR3 |
| ADediting_1159732 | chr5_115206751_- | UTR3 |
| ADediting_1159733 | chr5_115206753_- | UTR3 |
| ADediting_1159734 | chr5_115206757_- | UTR3 |
| ADediting_1159735 | chr5_115206764_- | UTR3 |
| ADediting_1159736 | chr5_115206768_- | UTR3 |
| ADediting_1159737 | chr5_115206780_- | UTR3 |
| ADediting_1159738 | chr5_115206782_- | UTR3 |
| ADediting_1159739 | chr5_115206789_- | UTR3 |
| ADediting_1159740 | chr5_115206790_- | UTR3 |
| ADediting_1159741 | chr5_115206791_- | UTR3 |
| ADediting_1159742 | chr5_115244209_- | intronic |
| ADediting_1159743 | chr5_115244276_- | intronic |
| ADediting_1159744 | chr5_115244365_- | intronic |
| ADediting_1159745 | chr5_115244402_- | intronic |
| ADediting_1159746 | chr5_115244459_- | intronic |
| ADediting_1159747 | chr5_115244654_- | intronic |
| ADediting_1159748 | chr5_115244742_- | intronic |
| ADediting_1159749 | chr5_115244770_- | intronic |
| ADediting_1159750 | chr5_115244773_- | intronic |
| ADediting_1159751 | chr5_115244794_- | intronic |
| ADediting_1159752 | chr5_115244795_- | intronic |
| ADediting_1159753 | chr5_115244804_- | intronic |
| ADediting_1159754 | chr5_115244814_- | intronic |
| ADediting_1159755 | chr5_115244818_- | intronic |
| ADediting_1159756 | chr5_115244833_- | intronic |
| ADediting_1159757 | chr5_115244837_- | intronic |
| ADediting_1159758 | chr5_115244842_- | intronic |
| ADediting_1159759 | chr5_115244863_- | intronic |
| ADediting_1159760 | chr5_115244864_- | intronic |
| ADediting_1578742 | chr5_115205853_- | UTR3 |
| ADediting_1578743 | chr5_115205893_- | UTR3 |
| ADediting_1578744 | chr5_115205910_- | UTR3 |
| ADediting_1578745 | chr5_115238358_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1159653 | chr5_115205821_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159654 | chr5_115205822_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159655 | chr5_115205823_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159656 | chr5_115205824_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159657 | chr5_115205836_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159658 | chr5_115205840_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159659 | chr5_115205841_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159660 | chr5_115205843_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159661 | chr5_115205845_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159662 | chr5_115205847_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159663 | chr5_115205851_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159664 | chr5_115205852_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159665 | chr5_115205869_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159666 | chr5_115205876_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159667 | chr5_115205877_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159668 | chr5_115205879_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159669 | chr5_115205883_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159670 | chr5_115205884_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159671 | chr5_115205885_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159672 | chr5_115205886_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159673 | chr5_115205895_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159674 | chr5_115205904_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159675 | chr5_115205906_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159676 | chr5_115205907_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159677 | chr5_115205908_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159678 | chr5_115205909_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159679 | chr5_115205912_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159680 | chr5_115205915_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159681 | chr5_115205916_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159682 | chr5_115205918_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159683 | chr5_115205925_- | LINE | L1 | Name=L1ME3A |
| ADediting_1159684 | chr5_115205967_- | DNA | TcMar-Mariner | Name=MADE1 |
| ADediting_1159704 | chr5_115206667_- | LINE | L1 | Name=L1M5 |
| ADediting_1159705 | chr5_115206668_- | LINE | L1 | Name=L1M5 |
| ADediting_1159706 | chr5_115206672_- | LINE | L1 | Name=L1M5 |
| ADediting_1159707 | chr5_115206680_- | LINE | L1 | Name=L1M5 |
| ADediting_1159708 | chr5_115206681_- | LINE | L1 | Name=L1M5 |
| ADediting_1159709 | chr5_115206689_- | LINE | L1 | Name=L1M5 |
| ADediting_1159710 | chr5_115206691_- | LINE | L1 | Name=L1M5 |
| ADediting_1159711 | chr5_115206695_- | LINE | L1 | Name=L1M5 |
| ADediting_1159712 | chr5_115206697_- | LINE | L1 | Name=L1M5 |
| ADediting_1159713 | chr5_115206702_- | LINE | L1 | Name=L1M5 |
| ADediting_1159714 | chr5_115206705_- | LINE | L1 | Name=L1M5 |
| ADediting_1159715 | chr5_115206706_- | LINE | L1 | Name=L1M5 |
| ADediting_1159716 | chr5_115206712_- | LINE | L1 | Name=L1M5 |
| ADediting_1159717 | chr5_115206714_- | LINE | L1 | Name=L1M5 |
| ADediting_1159718 | chr5_115206716_- | LINE | L1 | Name=L1M5 |
| ADediting_1159719 | chr5_115206719_- | LINE | L1 | Name=L1M5 |
| ADediting_1159720 | chr5_115206720_- | LINE | L1 | Name=L1M5 |
| ADediting_1159721 | chr5_115206724_- | LINE | L1 | Name=L1M5 |
| ADediting_1159722 | chr5_115206726_- | LINE | L1 | Name=L1M5 |
| ADediting_1159723 | chr5_115206727_- | LINE | L1 | Name=L1M5 |
| ADediting_1159724 | chr5_115206728_- | LINE | L1 | Name=L1M5 |
| ADediting_1159725 | chr5_115206734_- | LINE | L1 | Name=L1M5 |
| ADediting_1159726 | chr5_115206735_- | LINE | L1 | Name=L1M5 |
| ADediting_1159727 | chr5_115206736_- | LINE | L1 | Name=L1M5 |
| ADediting_1159728 | chr5_115206738_- | LINE | L1 | Name=L1M5 |
| ADediting_1159729 | chr5_115206739_- | LINE | L1 | Name=L1M5 |
| ADediting_1159730 | chr5_115206740_- | LINE | L1 | Name=L1M5 |
| ADediting_1159731 | chr5_115206745_- | LINE | L1 | Name=L1M5 |
| ADediting_1159732 | chr5_115206751_- | LINE | L1 | Name=L1M5 |
| ADediting_1159733 | chr5_115206753_- | LINE | L1 | Name=L1M5 |
| ADediting_1159734 | chr5_115206757_- | LINE | L1 | Name=L1M5 |
| ADediting_1159735 | chr5_115206764_- | LINE | L1 | Name=L1M5 |
| ADediting_1159736 | chr5_115206768_- | LINE | L1 | Name=L1M5 |
| ADediting_1159737 | chr5_115206780_- | LINE | L1 | Name=L1M5 |
| ADediting_1159738 | chr5_115206782_- | LINE | L1 | Name=L1M5 |
| ADediting_1159739 | chr5_115206789_- | LINE | L1 | Name=L1M5 |
| ADediting_1159740 | chr5_115206790_- | LINE | L1 | Name=L1M5 |
| ADediting_1159741 | chr5_115206791_- | LINE | L1 | Name=L1M5 |
| ADediting_1159742 | chr5_115244209_- | SINE | Alu | Name=AluY |
| ADediting_1159743 | chr5_115244276_- | SINE | Alu | Name=AluY |
| ADediting_1159744 | chr5_115244365_- | SINE | Alu | Name=AluY |
| ADediting_1159745 | chr5_115244402_- | SINE | Alu | Name=AluY |
| ADediting_1159746 | chr5_115244459_- | SINE | Alu | Name=AluY |
| ADediting_1159747 | chr5_115244654_- | SINE | Alu | Name=AluSz |
| ADediting_1159748 | chr5_115244742_- | SINE | Alu | Name=AluSz |
| ADediting_1159749 | chr5_115244770_- | SINE | Alu | Name=AluSz |
| ADediting_1159750 | chr5_115244773_- | SINE | Alu | Name=AluSz |
| ADediting_1159751 | chr5_115244794_- | SINE | Alu | Name=AluSz |
| ADediting_1159752 | chr5_115244795_- | SINE | Alu | Name=AluSz |
| ADediting_1159753 | chr5_115244804_- | SINE | Alu | Name=AluSz |
| ADediting_1159754 | chr5_115244814_- | SINE | Alu | Name=AluSz |
| ADediting_1159755 | chr5_115244818_- | SINE | Alu | Name=AluSz |
| ADediting_1159756 | chr5_115244833_- | SINE | Alu | Name=AluSz |
| ADediting_1159757 | chr5_115244837_- | SINE | Alu | Name=AluSz |
| ADediting_1159758 | chr5_115244842_- | SINE | Alu | Name=AluSz |
| ADediting_1159759 | chr5_115244863_- | SINE | Alu | Name=AluSz |
| ADediting_1159760 | chr5_115244864_- | SINE | Alu | Name=AluSz |
| ADediting_1578742 | chr5_115205853_- | LINE | L1 | Name=L1ME3A |
| ADediting_1578743 | chr5_115205893_- | LINE | L1 | Name=L1ME3A |
| ADediting_1578744 | chr5_115205910_- | LINE | L1 | Name=L1ME3A |
| ADediting_1578745 | chr5_115238358_- | SINE | Alu | Name=AluJr |
Top |
RNA A-to-I editing events in the alternative splicing sites for PGGT1B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for PGGT1B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for PGGT1B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for PGGT1B |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1159653 | chr5_115205821_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1228-3p | chr5 | 115205816 | 115205822 | 7mer-m8 | 115205815 | 115205832 | 151 | -22.27 |
| ADediting_1159656 | chr5_115205824_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-18a-3p | chr5 | 115205823 | 115205829 | 7mer-1a | 115205823 | 115205845 | 146 | -21.91 |
| ADediting_1159656 | chr5_115205824_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1913 | chr5 | 115205823 | 115205830 | 8mer-1a | 115205823 | 115205844 | 140 | -17.75 |
| ADediting_1159656 | chr5_115205824_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5001-3p | chr5 | 115205822 | 115205828 | 7mer-1a | 115205822 | 115205841 | 141 | -22.16 |
| ADediting_1159656 | chr5_115205824_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6738-3p | chr5 | 115205821 | 115205828 | 8mer-1a | 115205821 | 115205842 | 149 | -14.14 |
| ADediting_1159657 | chr5_115205836_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4764-3p | chr5 | 115205833 | 115205839 | 7mer-m8 | 115205832 | 115205854 | 151 | -11.91 |
| ADediting_1159658 | chr5_115205840_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3938 | chr5 | 115205835 | 115205841 | 7mer-m8 | 115205834 | 115205854 | 151 | -14.21 |
| ADediting_1159658 | chr5_115205840_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-454-5p | chr5 | 115205837 | 115205844 | 8mer-1a | 115205837 | 115205858 | 152 | -11.88 |
| ADediting_1159658 | chr5_115205840_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6883-3p | chr5 | 115205836 | 115205843 | 8mer-1a | 115205836 | 115205857 | 150 | -15.84 |
| ADediting_1159659 | chr5_115205841_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6072 | chr5 | 115205837 | 115205844 | 8mer-1a | 115205837 | 115205858 | 140 | -14.48 |
| ADediting_1159659 | chr5_115205841_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-670-3p | chr5 | 115205836 | 115205842 | 7mer-m8 | 115205835 | 115205857 | 154 | -10.83 |
| ADediting_1159659 | chr5_115205841_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6891-3p | chr5 | 115205837 | 115205844 | 8mer-1a | 115205837 | 115205857 | 145 | -12.33 |
| ADediting_1159662 | chr5_115205847_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1283 | chr5 | 115205843 | 115205850 | 8mer-1a | 115205843 | 115205865 | 145 | -13.15 |
| ADediting_1159664 | chr5_115205852_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4744 | chr5 | 115205851 | 115205858 | 8mer-1a | 115205851 | 115205873 | 140 | -11.35 |
| ADediting_1159666 | chr5_115205876_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1284 | chr5 | 115205876 | 115205882 | 7mer-m8 | 115205875 | 115205896 | 140 | -11.94 |
| ADediting_1159667 | chr5_115205877_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-154-3p | chr5 | 115205875 | 115205881 | 7mer-m8 | 115205874 | 115205895 | 148 | -10.06 |
| ADediting_1159667 | chr5_115205877_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-485-3p | chr5 | 115205876 | 115205882 | 7mer-m8 | 115205875 | 115205896 | 140 | -12.15 |
| ADediting_1159667 | chr5_115205877_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-487a-3p | chr5 | 115205875 | 115205881 | 7mer-m8 | 115205874 | 115205895 | 145 | -11.84 |
| ADediting_1159667 | chr5_115205877_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-539-3p | chr5 | 115205876 | 115205882 | 7mer-m8 | 115205875 | 115205896 | 143 | -11.83 |
| ADediting_1159668 | chr5_115205879_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-466 | chr5 | 115205876 | 115205883 | 8mer-1a | 115205876 | 115205900 | 152 | -9.74 |
| ADediting_1159671 | chr5_115205885_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-513c-5p | chr5 | 115205883 | 115205890 | 8mer-1a | 115205883 | 115205902 | 151 | -17.84 |
| ADediting_1159671 | chr5_115205885_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-514b-5p | chr5 | 115205883 | 115205890 | 8mer-1a | 115205883 | 115205907 | 142 | -17.7 |
| ADediting_1159673 | chr5_115205895_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-188-3p | chr5 | 115205893 | 115205899 | 7mer-m8 | 115205892 | 115205911 | 160 | -18.52 |
| ADediting_1159676 | chr5_115205907_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6844 | chr5 | 115205906 | 115205912 | 7mer-m8 | 115205905 | 115205925 | 144 | -6.53 |
| ADediting_1159677 | chr5_115205908_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-578 | chr5 | 115205906 | 115205912 | 7mer-m8 | 115205905 | 115205925 | 145 | -7.02 |
| ADediting_1159678 | chr5_115205909_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-20b-3p | chr5 | 115205908 | 115205915 | 8mer-1a | 115205908 | 115205928 | 145 | -12.95 |
| ADediting_1159679 | chr5_115205912_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6516-5p | chr5 | 115205908 | 115205915 | 8mer-1a | 115205908 | 115205930 | 143 | -15.01 |
| ADediting_1159684 | chr5_115205967_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5197-5p | chr5 | 115205962 | 115205968 | 7mer-m8 | 115205961 | 115205986 | 162 | -11.33 |
| ADediting_1159686 | chr5_115206005_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1206 | chr5 | 115206001 | 115206008 | 8mer-1a | 115206001 | 115206020 | 153 | -16.05 |
| ADediting_1159687 | chr5_115206017_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3117-5p | chr5 | 115206014 | 115206021 | 8mer-1a | 115206014 | 115206032 | 156 | -12.5 |
| ADediting_1159689 | chr5_115206031_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3973 | chr5 | 115206030 | 115206037 | 8mer-1a | 115206030 | 115206053 | 150 | -9.03 |
| ADediting_1159690 | chr5_115206036_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4422 | chr5 | 115206031 | 115206038 | 8mer-1a | 115206031 | 115206051 | 140 | -7.61 |
| ADediting_1159692 | chr5_115206042_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3187-3p | chr5 | 115206038 | 115206044 | 7mer-m8 | 115206037 | 115206056 | 149 | -17.69 |
| ADediting_1159693 | chr5_115206044_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4766-5p | chr5 | 115206044 | 115206050 | 7mer-m8 | 115206043 | 115206061 | 151 | -14.33 |
| ADediting_1159695 | chr5_115206616_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-216b-3p | chr5 | 115206614 | 115206620 | 7mer-m8 | 115206613 | 115206637 | 147 | -13.09 |
| ADediting_1159696 | chr5_115206621_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-421 | chr5 | 115206619 | 115206626 | 8mer-1a | 115206619 | 115206644 | 150 | -17.22 |
| ADediting_1159696 | chr5_115206621_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4709-5p | chr5 | 115206620 | 115206627 | 8mer-1a | 115206620 | 115206641 | 146 | -9.7 |
| ADediting_1159696 | chr5_115206621_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-676-5p | chr5 | 115206618 | 115206624 | 7mer-m8 | 115206617 | 115206637 | 140 | -11.83 |
| ADediting_1159698 | chr5_115206632_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-144-3p | chr5 | 115206631 | 115206637 | 7mer-m8 | 115206630 | 115206650 | 157 | -11.29 |
| ADediting_1159698 | chr5_115206632_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-16-1-3p | chr5 | 115206632 | 115206638 | 7mer-m8 | 115206631 | 115206651 | 146 | -6.59 |
| ADediting_1159700 | chr5_115206637_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1278 | chr5 | 115206632 | 115206639 | 8mer-1a | 115206632 | 115206656 | 149 | -14.68 |
| ADediting_1159700 | chr5_115206637_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4682 | chr5 | 115206637 | 115206643 | 7mer-m8 | 115206636 | 115206659 | 145 | -12.11 |
| ADediting_1159701 | chr5_115206642_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-221-3p | chr5 | 115206641 | 115206647 | 7mer-m8 | 115206640 | 115206668 | 143 | -15.57 |
| ADediting_1159701 | chr5_115206642_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-222-3p | chr5 | 115206641 | 115206647 | 7mer-m8 | 115206640 | 115206660 | 140 | -10.31 |
| ADediting_1159702 | chr5_115206647_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4719 | chr5 | 115206645 | 115206651 | 7mer-m8 | 115206644 | 115206666 | 165 | -11.7 |
| ADediting_1159703 | chr5_115206651_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6506-3p | chr5 | 115206651 | 115206657 | 7mer-m8 | 115206650 | 115206671 | 143 | -9.9 |
| ADediting_1159704 | chr5_115206667_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-676-3p | chr5 | 115206663 | 115206669 | 7mer-m8 | 115206662 | 115206682 | 142 | -8.9 |
| ADediting_1159705 | chr5_115206668_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-153-5p | chr5 | 115206667 | 115206674 | 8mer-1a | 115206667 | 115206687 | 150 | -11.19 |
| ADediting_1159707 | chr5_115206680_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1283 | chr5 | 115206680 | 115206686 | 7mer-m8 | 115206679 | 115206699 | 146 | -11.72 |
| ADediting_1159708 | chr5_115206681_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4705 | chr5 | 115206677 | 115206683 | 7mer-m8 | 115206676 | 115206697 | 144 | -15.92 |
| ADediting_1159709 | chr5_115206689_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-424-3p | chr5 | 115206685 | 115206691 | 7mer-m8 | 115206684 | 115206702 | 146 | -13.91 |
| ADediting_1159710 | chr5_115206691_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-11400 | chr5 | 115206691 | 115206697 | 7mer-m8 | 115206690 | 115206711 | 156 | -21.35 |
| ADediting_1159712 | chr5_115206697_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-604 | chr5 | 115206691 | 115206698 | 8mer-1a | 115206691 | 115206709 | 154 | -20.71 |
| ADediting_1159712 | chr5_115206697_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6068 | chr5 | 115206694 | 115206700 | 7mer-m8 | 115206693 | 115206714 | 146 | -19.08 |
| ADediting_1159713 | chr5_115206702_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4780 | chr5 | 115206702 | 115206708 | 7mer-m8 | 115206701 | 115206723 | 151 | -18.68 |
| ADediting_1159714 | chr5_115206705_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-345-3p | chr5 | 115206702 | 115206709 | 8mer-1a | 115206702 | 115206722 | 147 | -14.37 |
| ADediting_1159714 | chr5_115206705_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-670-5p | chr5 | 115206702 | 115206708 | 7mer-m8 | 115206701 | 115206722 | 153 | -21.32 |
| ADediting_1159716 | chr5_115206712_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-424-3p | chr5 | 115206708 | 115206714 | 7mer-m8 | 115206707 | 115206725 | 144 | -14 |
| ADediting_1159716 | chr5_115206712_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6506-3p | chr5 | 115206712 | 115206718 | 7mer-m8 | 115206711 | 115206732 | 142 | -12.42 |
| ADediting_1159717 | chr5_115206714_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5700 | chr5 | 115206710 | 115206716 | 7mer-m8 | 115206709 | 115206732 | 148 | -11.56 |
| ADediting_1159719 | chr5_115206719_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6890-3p | chr5 | 115206716 | 115206723 | 8mer-1a | 115206716 | 115206735 | 155 | -16.92 |
| ADediting_1159720 | chr5_115206720_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-136-3p | chr5 | 115206714 | 115206721 | 8mer-1a | 115206714 | 115206734 | 154 | -15.89 |
| ADediting_1159720 | chr5_115206720_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6785-3p | chr5 | 115206716 | 115206723 | 8mer-1a | 115206716 | 115206736 | 140 | -12.76 |
| ADediting_1159722 | chr5_115206726_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-24-1-5p | chr5 | 115206720 | 115206727 | 8mer-1a | 115206720 | 115206740 | 142 | -16.43 |
| ADediting_1159722 | chr5_115206726_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-24-2-5p | chr5 | 115206720 | 115206727 | 8mer-1a | 115206720 | 115206741 | 140 | -16.31 |
| ADediting_1159725 | chr5_115206734_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-103a-1-5p | chr5 | 115206732 | 115206739 | 8mer-1a | 115206732 | 115206751 | 154 | -15.7 |
| ADediting_1159725 | chr5_115206734_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-103a-2-5p | chr5 | 115206732 | 115206739 | 8mer-1a | 115206732 | 115206751 | 154 | -14.39 |
| ADediting_1159726 | chr5_115206735_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4753-3p | chr5 | 115206734 | 115206740 | 7mer-m8 | 115206733 | 115206755 | 151 | -10.23 |
| ADediting_1159726 | chr5_115206735_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6818-3p | chr5 | 115206732 | 115206738 | 7mer-m8 | 115206731 | 115206752 | 153 | -11.2 |
| ADediting_1159731 | chr5_115206745_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4762-5p | chr5 | 115206745 | 115206751 | 7mer-m8 | 115206744 | 115206766 | 149 | -16.85 |
| ADediting_1159733 | chr5_115206753_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5683 | chr5 | 115206751 | 115206757 | 7mer-1a | 115206751 | 115206774 | 155 | -17.39 |
| ADediting_1159738 | chr5_115206782_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-933 | chr5 | 115206779 | 115206785 | 7mer-m8 | 115206778 | 115206799 | 140 | -19.85 |
| ADediting_1159739 | chr5_115206789_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1228-3p | chr5 | 115206784 | 115206790 | 7mer-m8 | 115206783 | 115206802 | 140 | -11.37 |
| ADediting_1159740 | chr5_115206790_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-520f-5p | chr5 | 115206788 | 115206794 | 7mer-m8 | 115206787 | 115206808 | 143 | -9.69 |
| ADediting_1159741 | chr5_115206791_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3613-3p | chr5 | 115206790 | 115206797 | 8mer-1a | 115206790 | 115206813 | 140 | -5.01 |
| ADediting_1578743 | chr5_115205893_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6816-3p | chr5 | 115205888 | 115205894 | 7mer-m8 | 115205887 | 115205903 | 151 | -16.09 |
| ADediting_1578743 | chr5_115205893_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-6861-3p | chr5 | 115205890 | 115205896 | 7mer-m8 | 115205889 | 115205906 | 142 | -14.56 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1159653 | chr5_115205821_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-129-5p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205839 | 141 | -13.48 |
| ADediting_1159653 | chr5_115205821_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-9983-3p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205842 | 153 | -11.52 |
| ADediting_1159654 | chr5_115205822_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-129-5p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205839 | 141 | -13.48 |
| ADediting_1159654 | chr5_115205822_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-9983-3p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205842 | 153 | -11.52 |
| ADediting_1159655 | chr5_115205823_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-129-5p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205839 | 141 | -13.48 |
| ADediting_1159655 | chr5_115205823_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-9983-3p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205842 | 153 | -11.52 |
| ADediting_1159656 | chr5_115205824_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-129-5p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205839 | 141 | -13.48 |
| ADediting_1159656 | chr5_115205824_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-9983-3p | chr5 | 115205821 | 115205827 | 7mer-m8 | 115205820 | 115205842 | 153 | -11.52 |
| ADediting_1159669 | chr5_115205883_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1250-3p | chr5 | 115205881 | 115205887 | 7mer-m8 | 115205880 | 115205898 | 147 | -11.12 |
| ADediting_1159670 | chr5_115205884_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1250-3p | chr5 | 115205881 | 115205887 | 7mer-m8 | 115205880 | 115205898 | 147 | -11.12 |
| ADediting_1159671 | chr5_115205885_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1250-3p | chr5 | 115205881 | 115205887 | 7mer-m8 | 115205880 | 115205898 | 147 | -11.12 |
| ADediting_1159672 | chr5_115205886_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1250-3p | chr5 | 115205881 | 115205887 | 7mer-m8 | 115205880 | 115205898 | 147 | -11.12 |
| ADediting_1159673 | chr5_115205895_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1285-5p | chr5 | 115205892 | 115205898 | 7mer-m8 | 115205891 | 115205911 | 140 | -12.88 |
| ADediting_1159673 | chr5_115205895_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4695-3p | chr5 | 115205891 | 115205897 | 7mer-m8 | 115205890 | 115205911 | 152 | -13.39 |
| ADediting_1159674 | chr5_115205904_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-16-2-3p | chr5 | 115205901 | 115205907 | 7mer-m8 | 115205900 | 115205921 | 152 | -8.66 |
| ADediting_1159674 | chr5_115205904_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-195-3p | chr5 | 115205901 | 115205907 | 7mer-m8 | 115205900 | 115205920 | 143 | -8.42 |
| ADediting_1159674 | chr5_115205904_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3942-5p | chr5 | 115205899 | 115205905 | 7mer-m8 | 115205898 | 115205919 | 149 | -7.24 |
| ADediting_1159674 | chr5_115205904_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4703-5p | chr5 | 115205899 | 115205905 | 7mer-m8 | 115205898 | 115205920 | 140 | -8.2 |
| ADediting_1159675 | chr5_115205906_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-16-2-3p | chr5 | 115205901 | 115205907 | 7mer-m8 | 115205900 | 115205921 | 152 | -8.66 |
| ADediting_1159675 | chr5_115205906_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-195-3p | chr5 | 115205901 | 115205907 | 7mer-m8 | 115205900 | 115205920 | 143 | -8.42 |
| ADediting_1159679 | chr5_115205912_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4703-3p | chr5 | 115205910 | 115205917 | 8mer-1a | 115205910 | 115205933 | 146 | -15.28 |
| ADediting_1159680 | chr5_115205915_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4703-3p | chr5 | 115205910 | 115205917 | 8mer-1a | 115205910 | 115205933 | 146 | -15.28 |
| ADediting_1159681 | chr5_115205916_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4703-3p | chr5 | 115205910 | 115205917 | 8mer-1a | 115205910 | 115205933 | 146 | -15.28 |
| ADediting_1159685 | chr5_115206004_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-491-3p | chr5 | 115206003 | 115206010 | 8mer-1a | 115206003 | 115206027 | 146 | -7.2 |
| ADediting_1159686 | chr5_115206005_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-491-3p | chr5 | 115206003 | 115206010 | 8mer-1a | 115206003 | 115206027 | 146 | -7.2 |
| ADediting_1159690 | chr5_115206036_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-548l | chr5 | 115206031 | 115206038 | 8mer-1a | 115206031 | 115206048 | 143 | -8.07 |
| ADediting_1159694 | chr5_115206058_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-374c-5p | chr5 | 115206058 | 115206064 | 7mer-m8 | 115206057 | 115206076 | 149 | -8.76 |
| ADediting_1159695 | chr5_115206616_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1-5p | chr5 | 115206614 | 115206620 | 7mer-m8 | 115206613 | 115206634 | 146 | -8.51 |
| ADediting_1159696 | chr5_115206621_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-302b-5p | chr5 | 115206618 | 115206624 | 7mer-m8 | 115206617 | 115206641 | 153 | -12.55 |
| ADediting_1159696 | chr5_115206621_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-302d-5p | chr5 | 115206618 | 115206624 | 7mer-m8 | 115206617 | 115206636 | 146 | -13.28 |
| ADediting_1159698 | chr5_115206632_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-153-3p | chr5 | 115206627 | 115206634 | 8mer-1a | 115206627 | 115206648 | 145 | -13.03 |
| ADediting_1159704 | chr5_115206667_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4711-3p | chr5 | 115206661 | 115206668 | 8mer-1a | 115206661 | 115206678 | 142 | -8 |
| ADediting_1159706 | chr5_115206672_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-335-3p | chr5 | 115206670 | 115206676 | 7mer-1a | 115206670 | 115206691 | 142 | -10.37 |
| ADediting_1159707 | chr5_115206680_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4275 | chr5 | 115206677 | 115206683 | 7mer-m8 | 115206676 | 115206692 | 142 | -5.01 |
| ADediting_1159708 | chr5_115206681_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4275 | chr5 | 115206677 | 115206683 | 7mer-m8 | 115206676 | 115206692 | 142 | -5.01 |
| ADediting_1159709 | chr5_115206689_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4474-3p | chr5 | 115206689 | 115206695 | 7mer-m8 | 115206688 | 115206707 | 148 | -18.96 |
| ADediting_1159710 | chr5_115206691_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4474-3p | chr5 | 115206689 | 115206695 | 7mer-m8 | 115206688 | 115206707 | 148 | -18.96 |
| ADediting_1159711 | chr5_115206695_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4677-3p | chr5 | 115206694 | 115206700 | 7mer-m8 | 115206693 | 115206714 | 153 | -16.03 |
| ADediting_1159712 | chr5_115206697_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4677-3p | chr5 | 115206694 | 115206700 | 7mer-m8 | 115206693 | 115206714 | 153 | -16.03 |
| ADediting_1159713 | chr5_115206702_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-362-5p | chr5 | 115206701 | 115206707 | 7mer-m8 | 115206700 | 115206720 | 154 | -15.39 |
| ADediting_1159713 | chr5_115206702_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-500b-5p | chr5 | 115206701 | 115206707 | 7mer-m8 | 115206700 | 115206717 | 140 | -9.27 |
| ADediting_1159714 | chr5_115206705_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-362-5p | chr5 | 115206701 | 115206707 | 7mer-m8 | 115206700 | 115206720 | 154 | -15.39 |
| ADediting_1159714 | chr5_115206705_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-500b-5p | chr5 | 115206701 | 115206707 | 7mer-m8 | 115206700 | 115206717 | 140 | -9.27 |
| ADediting_1159715 | chr5_115206706_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-362-5p | chr5 | 115206701 | 115206707 | 7mer-m8 | 115206700 | 115206720 | 154 | -15.39 |
| ADediting_1159715 | chr5_115206706_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-500b-5p | chr5 | 115206701 | 115206707 | 7mer-m8 | 115206700 | 115206717 | 140 | -9.27 |
| ADediting_1159718 | chr5_115206716_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1912-5p | chr5 | 115206716 | 115206722 | 7mer-m8 | 115206715 | 115206739 | 149 | -13.71 |
| ADediting_1159719 | chr5_115206719_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1912-5p | chr5 | 115206716 | 115206722 | 7mer-m8 | 115206715 | 115206739 | 149 | -13.71 |
| ADediting_1159719 | chr5_115206719_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4317 | chr5 | 115206716 | 115206723 | 8mer-1a | 115206716 | 115206732 | 140 | -10.59 |
| ADediting_1159719 | chr5_115206719_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4774-3p | chr5 | 115206719 | 115206725 | 7mer-m8 | 115206718 | 115206741 | 145 | -15.76 |
| ADediting_1159720 | chr5_115206720_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1912-5p | chr5 | 115206716 | 115206722 | 7mer-m8 | 115206715 | 115206739 | 149 | -13.71 |
| ADediting_1159720 | chr5_115206720_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4317 | chr5 | 115206716 | 115206723 | 8mer-1a | 115206716 | 115206732 | 140 | -10.59 |
| ADediting_1159720 | chr5_115206720_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4774-3p | chr5 | 115206719 | 115206725 | 7mer-m8 | 115206718 | 115206741 | 145 | -15.76 |
| ADediting_1159721 | chr5_115206724_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4774-3p | chr5 | 115206719 | 115206725 | 7mer-m8 | 115206718 | 115206741 | 145 | -15.76 |
| ADediting_1159722 | chr5_115206726_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3680-3p | chr5 | 115206726 | 115206732 | 7mer-m8 | 115206725 | 115206747 | 146 | -13.53 |
| ADediting_1159723 | chr5_115206727_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3680-3p | chr5 | 115206726 | 115206732 | 7mer-m8 | 115206725 | 115206747 | 146 | -13.53 |
| ADediting_1159724 | chr5_115206728_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3680-3p | chr5 | 115206726 | 115206732 | 7mer-m8 | 115206725 | 115206747 | 146 | -13.53 |
| ADediting_1159724 | chr5_115206728_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4666b | chr5 | 115206727 | 115206734 | 8mer-1a | 115206727 | 115206749 | 144 | -10.3 |
| ADediting_1159731 | chr5_115206745_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3146 | chr5 | 115206740 | 115206746 | 7mer-1a | 115206740 | 115206764 | 145 | -14.85 |
| ADediting_1159734 | chr5_115206757_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-3976 | chr5 | 115206756 | 115206762 | 7mer-m8 | 115206755 | 115206778 | 149 | -11.38 |
| ADediting_1159736 | chr5_115206768_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1285-3p | chr5 | 115206766 | 115206772 | 7mer-1a | 115206766 | 115206788 | 143 | -22.14 |
| ADediting_1159736 | chr5_115206768_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1298-3p | chr5 | 115206764 | 115206771 | 8mer-1a | 115206764 | 115206784 | 154 | -14.8 |
| ADediting_1159737 | chr5_115206780_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-548az-5p | chr5 | 115206775 | 115206781 | 7mer-m8 | 115206774 | 115206795 | 150 | -9.98 |
| ADediting_1159737 | chr5_115206780_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-548t-5p | chr5 | 115206775 | 115206781 | 7mer-m8 | 115206774 | 115206794 | 154 | -9.71 |
| ADediting_1159737 | chr5_115206780_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-595 | chr5 | 115206777 | 115206783 | 7mer-m8 | 115206776 | 115206796 | 145 | -14.49 |
| ADediting_1159737 | chr5_115206780_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-648 | chr5 | 115206778 | 115206784 | 7mer-m8 | 115206777 | 115206792 | 148 | -16.85 |
| ADediting_1159738 | chr5_115206782_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-595 | chr5 | 115206777 | 115206783 | 7mer-m8 | 115206776 | 115206796 | 145 | -14.49 |
| ADediting_1159738 | chr5_115206782_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-648 | chr5 | 115206778 | 115206784 | 7mer-m8 | 115206777 | 115206792 | 148 | -16.85 |
| ADediting_1159739 | chr5_115206789_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-216b-3p | chr5 | 115206784 | 115206790 | 7mer-m8 | 115206783 | 115206802 | 145 | -15.84 |
| ADediting_1578743 | chr5_115205893_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-1285-5p | chr5 | 115205892 | 115205898 | 7mer-m8 | 115205891 | 115205911 | 140 | -12.88 |
| ADediting_1578743 | chr5_115205893_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4695-3p | chr5 | 115205891 | 115205897 | 7mer-m8 | 115205890 | 115205911 | 152 | -13.39 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-589-3p | chr5 | 115209941 | 115209947 | 7mer-m8 | 115209940 | 115209963 | 146 | -16.86 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-151a-3p | chr5 | 115208981 | 115208988 | 8mer-1a | 115208981 | 115209000 | 156 | -17.61 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4477b | chr5 | 115205633 | 115205640 | 8mer-1a | 115205633 | 115205654 | 140 | -9.48 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-381-3p | chr5 | 115206222 | 115206228 | 7mer-1a | 115206222 | 115206245 | 141 | -18.17 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-641 | chr5 | 115204421 | 115204427 | 7mer-m8 | 115204420 | 115204444 | 148 | -16.81 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-556-3p | chr5 | 115208679 | 115208686 | 8mer-1a | 115208679 | 115208700 | 148 | -9.01 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-556-3p | chr5 | 115210642 | 115210649 | 8mer-1a | 115210642 | 115210664 | 159 | -15.07 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5585-3p | chr5 | 115204651 | 115204657 | 7mer-m8 | 115204650 | 115204670 | 154 | -15.57 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5585-3p | chr5 | 115211416 | 115211423 | 8mer-1a | 115211416 | 115211437 | 142 | -11.36 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4477b | chr5 | 115210302 | 115210308 | 7mer-m8 | 115210301 | 115210324 | 143 | -10.43 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4477b | chr5 | 115210302 | 115210308 | 7mer-m8 | 115210301 | 115210324 | 143 | -10.43 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-641 | chr5 | 115206965 | 115206971 | 7mer-m8 | 115206964 | 115206987 | 143 | -12.29 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-641 | chr5 | 115206965 | 115206971 | 7mer-m8 | 115206964 | 115206987 | 143 | -12.29 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4775 | chr5 | 115206916 | 115206922 | 7mer-m8 | 115206915 | 115206935 | 148 | -4.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4775 | chr5 | 115207477 | 115207483 | 7mer-m8 | 115207476 | 115207497 | 140 | -9.44 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4775 | chr5 | 115208785 | 115208792 | 8mer-1a | 115208785 | 115208806 | 150 | -10.57 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-4775 | chr5 | 115209736 | 115209742 | 7mer-m8 | 115209735 | 115209756 | 150 | -6.34 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5585-3p | chr5 | 115208014 | 115208020 | 7mer-m8 | 115208013 | 115208035 | 144 | -11.21 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000164219.10 | ENST00000419445.6 | PGGT1B-203 | hsa-miR-5585-3p | chr5 | 115208014 | 115208020 | 7mer-m8 | 115208013 | 115208035 | 144 | -11.21 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for PGGT1B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000419445.6 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1159653 | ENST00000419445.6 | chr5_115205821_- | 7741 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159654 | ENST00000419445.6 | chr5_115205822_- | 7740 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159655 | ENST00000419445.6 | chr5_115205823_- | 7739 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159656 | ENST00000419445.6 | chr5_115205824_- | 7738 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159657 | ENST00000419445.6 | chr5_115205836_- | 7726 | -2367.20 | -2361.80 | -2339.00 |
| ADediting_1159658 | ENST00000419445.6 | chr5_115205840_- | 7722 | -2367.30 | -2361.80 | -2339.00 |
| ADediting_1159659 | ENST00000419445.6 | chr5_115205841_- | 7721 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159660 | ENST00000419445.6 | chr5_115205843_- | 7719 | -2361.20 | -2361.80 | -2339.00 |
| ADediting_1159661 | ENST00000419445.6 | chr5_115205845_- | 7717 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159662 | ENST00000419445.6 | chr5_115205847_- | 7715 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159663 | ENST00000419445.6 | chr5_115205851_- | 7711 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159664 | ENST00000419445.6 | chr5_115205852_- | 7710 | -2362.20 | -2361.80 | -2339.00 |
| ADediting_1578742 | ENST00000419445.6 | chr5_115205853_- | 7709 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159665 | ENST00000419445.6 | chr5_115205869_- | 7693 | -2362.10 | -2361.80 | -2339.00 |
| ADediting_1159666 | ENST00000419445.6 | chr5_115205876_- | 7686 | -2362.10 | -2361.80 | -2339.00 |
| ADediting_1159667 | ENST00000419445.6 | chr5_115205877_- | 7685 | -2364.40 | -2361.80 | -2339.00 |
| ADediting_1159668 | ENST00000419445.6 | chr5_115205879_- | 7683 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159669 | ENST00000419445.6 | chr5_115205883_- | 7679 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159670 | ENST00000419445.6 | chr5_115205884_- | 7678 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159671 | ENST00000419445.6 | chr5_115205885_- | 7677 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159672 | ENST00000419445.6 | chr5_115205886_- | 7676 | -2361.30 | -2361.80 | -2339.00 |
| ADediting_1578743 | ENST00000419445.6 | chr5_115205893_- | 7669 | -2361.20 | -2361.80 | -2339.00 |
| ADediting_1159673 | ENST00000419445.6 | chr5_115205895_- | 7667 | -2360.90 | -2361.80 | -2339.00 |
| ADediting_1159674 | ENST00000419445.6 | chr5_115205904_- | 7658 | -2367.60 | -2361.80 | -2339.00 |
| ADediting_1159675 | ENST00000419445.6 | chr5_115205906_- | 7656 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159676 | ENST00000419445.6 | chr5_115205907_- | 7655 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159677 | ENST00000419445.6 | chr5_115205908_- | 7654 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159678 | ENST00000419445.6 | chr5_115205909_- | 7653 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1578744 | ENST00000419445.6 | chr5_115205910_- | 7652 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159679 | ENST00000419445.6 | chr5_115205912_- | 7650 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159680 | ENST00000419445.6 | chr5_115205915_- | 7647 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159681 | ENST00000419445.6 | chr5_115205916_- | 7646 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159682 | ENST00000419445.6 | chr5_115205918_- | 7644 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159683 | ENST00000419445.6 | chr5_115205925_- | 7637 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159684 | ENST00000419445.6 | chr5_115205967_- | 7595 | -2368.20 | -2361.80 | -2339.00 |
| ADediting_1159685 | ENST00000419445.6 | chr5_115206004_- | 7558 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159686 | ENST00000419445.6 | chr5_115206005_- | 7557 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159687 | ENST00000419445.6 | chr5_115206017_- | 7545 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159688 | ENST00000419445.6 | chr5_115206020_- | 7542 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159689 | ENST00000419445.6 | chr5_115206031_- | 7531 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159690 | ENST00000419445.6 | chr5_115206036_- | 7526 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159691 | ENST00000419445.6 | chr5_115206038_- | 7524 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159692 | ENST00000419445.6 | chr5_115206042_- | 7520 | -2361.20 | -2361.80 | -2339.00 |
| ADediting_1159693 | ENST00000419445.6 | chr5_115206044_- | 7518 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159694 | ENST00000419445.6 | chr5_115206058_- | 7504 | -2358.80 | -2361.80 | -2339.00 |
| ADediting_1159695 | ENST00000419445.6 | chr5_115206616_- | 6946 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159696 | ENST00000419445.6 | chr5_115206621_- | 6941 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159697 | ENST00000419445.6 | chr5_115206627_- | 6935 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159698 | ENST00000419445.6 | chr5_115206632_- | 6930 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159699 | ENST00000419445.6 | chr5_115206635_- | 6927 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159700 | ENST00000419445.6 | chr5_115206637_- | 6925 | -2362.10 | -2361.80 | -2339.00 |
| ADediting_1159701 | ENST00000419445.6 | chr5_115206642_- | 6920 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159702 | ENST00000419445.6 | chr5_115206647_- | 6915 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159703 | ENST00000419445.6 | chr5_115206651_- | 6911 | -2364.50 | -2361.80 | -2339.00 |
| ADediting_1159704 | ENST00000419445.6 | chr5_115206667_- | 6895 | -2361.70 | -2361.80 | -2339.00 |
| ADediting_1159705 | ENST00000419445.6 | chr5_115206668_- | 6894 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159706 | ENST00000419445.6 | chr5_115206672_- | 6890 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159707 | ENST00000419445.6 | chr5_115206680_- | 6882 | -2368.00 | -2361.80 | -2339.00 |
| ADediting_1159708 | ENST00000419445.6 | chr5_115206681_- | 6881 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159709 | ENST00000419445.6 | chr5_115206689_- | 6873 | -2362.10 | -2361.80 | -2339.00 |
| ADediting_1159710 | ENST00000419445.6 | chr5_115206691_- | 6871 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159711 | ENST00000419445.6 | chr5_115206695_- | 6867 | -2361.10 | -2361.80 | -2339.00 |
| ADediting_1159712 | ENST00000419445.6 | chr5_115206697_- | 6865 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159713 | ENST00000419445.6 | chr5_115206702_- | 6860 | -2361.20 | -2361.80 | -2339.00 |
| ADediting_1159714 | ENST00000419445.6 | chr5_115206705_- | 6857 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159715 | ENST00000419445.6 | chr5_115206706_- | 6856 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159716 | ENST00000419445.6 | chr5_115206712_- | 6850 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159717 | ENST00000419445.6 | chr5_115206714_- | 6848 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159718 | ENST00000419445.6 | chr5_115206716_- | 6846 | -2362.10 | -2361.80 | -2339.00 |
| ADediting_1159719 | ENST00000419445.6 | chr5_115206719_- | 6843 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159720 | ENST00000419445.6 | chr5_115206720_- | 6842 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159721 | ENST00000419445.6 | chr5_115206724_- | 6838 | -2368.40 | -2361.80 | -2339.00 |
| ADediting_1159722 | ENST00000419445.6 | chr5_115206726_- | 6836 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159723 | ENST00000419445.6 | chr5_115206727_- | 6835 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159724 | ENST00000419445.6 | chr5_115206728_- | 6834 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159725 | ENST00000419445.6 | chr5_115206734_- | 6828 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159726 | ENST00000419445.6 | chr5_115206735_- | 6827 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159727 | ENST00000419445.6 | chr5_115206736_- | 6826 | -2361.30 | -2361.80 | -2339.00 |
| ADediting_1159728 | ENST00000419445.6 | chr5_115206738_- | 6824 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159729 | ENST00000419445.6 | chr5_115206739_- | 6823 | -2362.20 | -2361.80 | -2339.00 |
| ADediting_1159730 | ENST00000419445.6 | chr5_115206740_- | 6822 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159731 | ENST00000419445.6 | chr5_115206745_- | 6817 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159732 | ENST00000419445.6 | chr5_115206751_- | 6811 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159733 | ENST00000419445.6 | chr5_115206753_- | 6809 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159734 | ENST00000419445.6 | chr5_115206757_- | 6805 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159735 | ENST00000419445.6 | chr5_115206764_- | 6798 | -2361.80 | -2361.80 | -2339.00 |
| ADediting_1159736 | ENST00000419445.6 | chr5_115206768_- | 6794 | -2361.10 | -2361.80 | -2339.00 |
| ADediting_1159737 | ENST00000419445.6 | chr5_115206780_- | 6782 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159738 | ENST00000419445.6 | chr5_115206782_- | 6780 | -2361.40 | -2361.80 | -2339.00 |
| ADediting_1159739 | ENST00000419445.6 | chr5_115206789_- | 6773 | -2361.50 | -2361.80 | -2339.00 |
| ADediting_1159740 | ENST00000419445.6 | chr5_115206790_- | 6772 | -2361.90 | -2361.80 | -2339.00 |
| ADediting_1159741 | ENST00000419445.6 | chr5_115206791_- | 6771 | -2361.90 | -2361.80 | -2339.00 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for PGGT1B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1159658 | chr5_115205840_- | 5.22233194626836e-11 | 0.503313012808896 | 8.99803550294732e-08 | 0.419676114138824 | 0.00850965688825775 | 0.214126048574633 |
| TCX | ADediting_1159658 | chr5_115205840_- | 7.1988602203431e-05 | 0.318309134725122 | 0.231459793685264 | 0.0982880092755537 | 0.00240202963328024 | 0.246076772090236 |
| CER | ADediting_1159659 | chr5_115205841_- | 1.36704158883177e-12 | 0.537209009689686 | 6.63016354438686e-11 | 0.500956015917916 | 0.0658835490521999 | 0.150573542710652 |
| TCX | ADediting_1159659 | chr5_115205841_- | 3.57253694247444e-05 | 0.330719952345443 | 0.151018287616404 | 0.117821184569232 | 0.00672606971416634 | 0.220395603126408 |
| CER | ADediting_1159666 | chr5_115205876_- | 7.90234812336445e-16 | 0.5965753255765 | 3.65043201034527e-15 | 0.585326375395225 | 0.0094493448900176 | 0.211279490762473 |
| TCX | ADediting_1159666 | chr5_115205876_- | 1.71042970429605e-05 | 0.343214614206648 | 0.00471365031058179 | 0.22957061448055 | 0.0493950367105809 | 0.160754782500564 |
| CER | ADediting_1159668 | chr5_115205879_- | 1.35356790541202e-16 | 0.60902263669544 | 7.11240425665853e-15 | 0.580283976284084 | 0.00257187433947737 | 0.244452931210192 |
| TCX | ADediting_1159668 | chr5_115205879_- | 6.34674692423521e-06 | 0.35923187792173 | 0.0134723905096847 | 0.201372198283474 | 0.109403844480835 | 0.131243051382183 |
| AC | ADediting_1159669 | chr5_115205883_- | 3.47801223211767e-07 | 0.315577224672003 | 0.00200355357148525 | 0.194515086089643 | 0.00080093827535768 | 0.210699535299284 |
| CER | ADediting_1159669 | chr5_115205883_- | 7.15155777802436e-13 | 0.542862309495765 | 1.00600058931048e-10 | 0.496795156670252 | 0.029462342297767 | 0.17783939370553 |
| CER | ADediting_1159670 | chr5_115205884_- | 6.6615462999513e-12 | 0.522931401192135 | 4.10176752665238e-10 | 0.48234269583853 | 0.00661611666831623 | 0.220828795702407 |
| TCX | ADediting_1159670 | chr5_115205884_- | 0.000184459616712479 | 0.300737570342175 | 0.0385634666543659 | 0.169114082054614 | 0.0433987715617652 | 0.16516741976876 |
| CER | ADediting_1159671 | chr5_115205885_- | 1.28254619052304e-09 | 0.470103983521385 | 1.11078132733253e-05 | 0.350296368259793 | 0.015333520690098 | 0.197648372090816 |
| TCX | ADediting_1159671 | chr5_115205885_- | 6.02397019141813e-05 | 0.321516715279646 | 0.0300652763308253 | 0.177195134101083 | 0.105621728369265 | 0.132649758718459 |
| CER | ADediting_1159673 | chr5_115205895_- | 8.32198203245744e-10 | 0.474804423549374 | 2.89383342951976e-11 | 0.509066603157974 | 0.0121688698677529 | 0.20425845897214 |
| TCX | ADediting_1159673 | chr5_115205895_- | 0.0290101788393119 | 0.178329955833235 | 1.03943879059798e-05 | 0.351370389954567 | 0.25660094048001 | -0.093206323961262 |
| CER | ADediting_1159674 | chr5_115205904_- | 2.95120288385984e-10 | 0.485788936214754 | 2.2780585073239e-08 | 0.436886116017951 | 0.00390349608992235 | 0.234300245037312 |
| CER | ADediting_1159675 | chr5_115205906_- | 7.6358702121998e-08 | 0.42178379443922 | 9.06871109540935e-09 | 0.447912236059309 | 0.061984789670124 | 0.152773489807804 |
| CER | ADediting_1159676 | chr5_115205907_- | 2.81151319231266e-09 | 0.461388589421043 | 2.6248010661848e-08 | 0.435154716381214 | 0.127181275480875 | 0.1250979457995 |
| CER | ADediting_1159677 | chr5_115205908_- | 3.42796227778748e-10 | 0.484226010410917 | 6.44181551987793e-08 | 0.423952114185984 | 0.0685090738468951 | 0.149151201518329 |
| CER | ADediting_1159678 | chr5_115205909_- | 6.60333678483646e-07 | 0.392858758654812 | 4.78902510466815e-05 | 0.325594352223867 | 0.0107135667203316 | 0.207820649470115 |
| CER | ADediting_1159679 | chr5_115205912_- | 1.8895105415428e-11 | 0.513155128557494 | 2.2615703747623e-09 | 0.463830157794727 | 0.00887801461753358 | 0.212978576633991 |
| PCC | ADediting_1159689 | chr5_115206031_- | 0.0360126820547222 | 0.151833914750903 | 0.164288497585659 | 0.101039709300078 | 9.12922469965137e-06 | 0.314899492556074 |
| CER | ADediting_1159689 | chr5_115206031_- | 0.000175717318629221 | 0.301671847821616 | 0.0883111934977165 | 0.139647048316975 | 0.332852013214409 | 0.0796087114996135 |
| TCX | ADediting_1159689 | chr5_115206031_- | 3.84405511008214e-05 | 0.329447284069794 | 0.190303175780519 | 0.107524338788367 | 0.00885038468719505 | 0.213063171452286 |
| CER | ADediting_1159690 | chr5_115206036_- | 1.11659505307623e-06 | 0.385380597188308 | 8.30347614875158e-05 | 0.315712874075656 | 0.548830217876943 | 0.0493329821458947 |
| CER | ADediting_1159695 | chr5_115206616_- | 1.67569776099847e-12 | 0.535410698950824 | 1.60859608540561e-06 | 0.380072400546525 | 0.000355599297160264 | 0.287786464550683 |
| TCX | ADediting_1159695 | chr5_115206616_- | 7.36285763276303e-06 | 0.356887227465002 | 0.0679309942319319 | 0.149460507378434 | 0.037218666499664 | 0.170285495908439 |
| CER | ADediting_1159696 | chr5_115206621_- | 1.36035580233527e-12 | 0.537252186233376 | 7.97696105654145e-10 | 0.47526077605412 | 0.0323378400255681 | 0.174861512184095 |
| CER | ADediting_1159698 | chr5_115206632_- | 2.33063514415126e-14 | 0.571091461210956 | 9.14472049660032e-08 | 0.419467703738873 | 0.0110683159948942 | 0.206914820961057 |
| CER | ADediting_1159707 | chr5_115206680_- | 4.46459745834464e-21 | 0.67237288451798 | 1.37620401097164e-11 | 0.516160689256352 | 0.0228780808907821 | 0.185725084679098 |
| CER | ADediting_1159708 | chr5_115206681_- | 1.9638195975755e-08 | 0.438689692537723 | 3.72270270822881e-05 | 0.330005293533158 | 0.000967367633465624 | 0.266763572345177 |
| CER | ADediting_1159709 | chr5_115206689_- | 1.992201232069e-20 | 0.664070519123437 | 3.20658577211346e-13 | 0.54971801678198 | 0.205688265706968 | 0.103917851061689 |
| TCX | ADediting_1159709 | chr5_115206689_- | 1.36548053763914e-06 | 0.382466377827965 | 0.00751946018530813 | 0.21744416073535 | 0.130064079013717 | 0.124165141446605 |
| CER | ADediting_1159712 | chr5_115206697_- | 1.23455193184572e-05 | 0.348578995931751 | 2.50816296406055e-05 | 0.336787792609585 | 0.125804962739168 | 0.125549037902571 |
| CER | ADediting_1159714 | chr5_115206705_- | 2.49911420077067e-19 | 0.649401337862099 | 1.11684548926508e-13 | 0.558501225932351 | 0.165514731980984 | 0.113812365289837 |
| TCX | ADediting_1159714 | chr5_115206705_- | 3.05584958327179e-05 | 0.33341544966842 | 0.0865641599535649 | 0.140412272093809 | 0.123831162028708 | 0.126202649835475 |
| CER | ADediting_1159715 | chr5_115206706_- | 2.59245195347606e-12 | 0.531519836035916 | 7.05607576010804e-10 | 0.476579067154445 | 0.461052268994321 | 0.0606370532059381 |
| CER | ADediting_1159717 | chr5_115206714_- | 2.02922093544156e-07 | 0.409015984297298 | 0.000805760532003297 | 0.270729463919756 | 0.615232675128103 | 0.0413670916454651 |
| CER | ADediting_1159718 | chr5_115206716_- | 7.73331793420737e-23 | 0.693610423982351 | 8.36198239123927e-15 | 0.579047173497556 | 0.153011227123559 | 0.117253386781836 |
| TCX | ADediting_1159718 | chr5_115206716_- | 1.24933348074632e-06 | 0.383757286249581 | 0.0384468790314474 | 0.169214264791042 | 0.0478906157173145 | 0.161818075110831 |
| CER | ADediting_1159721 | chr5_115206724_- | 4.9632905357769e-23 | 0.695826261568892 | 2.33595178344741e-14 | 0.571073535003391 | 0.0452587582612514 | 0.163746978943745 |
| TCX | ADediting_1159721 | chr5_115206724_- | 6.12785640237052e-08 | 0.424586355260677 | 0.00935574554462591 | 0.211551519579994 | 0.165708726995279 | 0.113760531834891 |
| CER | ADediting_1159722 | chr5_115206726_- | 6.04080664272129e-15 | 0.581526578410506 | 7.41134411543698e-10 | 0.476051827216321 | 0.0174675379922962 | 0.193835345306642 |
| TCX | ADediting_1159722 | chr5_115206726_- | 4.08609286712313e-05 | 0.328382093044343 | 0.108144781468001 | 0.131707051166224 | 0.0455872897375052 | 0.163501168114914 |
| CER | ADediting_1159723 | chr5_115206727_- | 1.75061891410216e-14 | 0.573334236670059 | 6.49067216838948e-08 | 0.423856091859771 | 0.0690015707177569 | 0.148889358067659 |
| TCX | ADediting_1159723 | chr5_115206727_- | 6.2437520826818e-06 | 0.359489061417822 | 0.191233405419003 | 0.107300386442868 | 0.00798112279368027 | 0.215851786087408 |
| CER | ADediting_1159726 | chr5_115206735_- | 0.000181088786942777 | 0.301092824101869 | 0.0420032475068187 | 0.166266971818058 | 0.0822639353497873 | 0.142349863056072 |
| CER | ADediting_1159732 | chr5_115206751_- | 4.2344448869274e-21 | 0.672661839535705 | 5.07222121691597e-12 | 0.525436794580734 | 0.103915694130604 | 0.133297264594476 |
| TCX | ADediting_1159732 | chr5_115206751_- | 2.24649265406597e-08 | 0.43705610895226 | 0.0264286245767564 | 0.181262570522913 | 0.0698716439869403 | 0.148430461130473 |
| CER | ADediting_1159733 | chr5_115206753_- | 1.59746352831035e-10 | 0.492113844479292 | 8.41537613049418e-07 | 0.389429573904116 | 0.331904646694543 | 0.079764357524272 |
| CER | ADediting_1159734 | chr5_115206757_- | 7.61786813260857e-07 | 0.390842273817466 | 0.0354679074100811 | 0.171865193822986 | 0.0668169481853916 | 0.150062681224252 |
| TCX | ADediting_1159734 | chr5_115206757_- | 1.33084081680022e-05 | 0.347351979006242 | 0.0225014290540101 | 0.186232751114295 | 0.558710320533998 | 0.0481201821895873 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.39475026186973e-21 | 0.506257810171952 | 3.16456127879046e-10 | 0.347485380297698 | 0.395798758111961 | 0.0483956250199999 |
| AC | 2.75613547486925e-56 | 0.797233025389056 | 1.26153882007825e-27 | 0.617064804066417 | 1.53768492517232e-22 | 0.565600434966103 |
| PCC | 8.9646712326085e-26 | 0.665257092177446 | 1.70607647724035e-15 | 0.534338521685576 | 9.10315665649058e-11 | 0.44693072408372 |
| CER | 3.12151163500383e-46 | 0.865264758955064 | 9.78190202652985e-20 | 0.654936846977029 | 0.024852193407452 | 0.183176170800592 |
| TCX | 1.10846703366706e-14 | 0.576880799018164 | 0.118021460632885 | 0.128174441021683 | 1.01664455560953e-07 | 0.418099125756484 |
| FP | 6.03368303035228e-18 | 0.588142653844532 | 2.25728001709016e-21 | 0.633655222761976 | 0.000688498923276345 | 0.252055622407683 |
| IFG | 4.12298480172014e-05 | 0.725104917059762 | 0.0104452595101279 | 0.502633358658292 | 0.0314274601458284 | 0.431116671226727 |
| PG | 5.16257692646491e-47 | 0.822732978233514 | 2.9533609178592e-24 | 0.655952618115395 | 0.544914640075984 | 0.0446688898761345 |
| STG | 9.12649932630955e-11 | 0.634520030676229 | 5.00205617884892e-07 | 0.516231573438894 | 0.136691118423491 | 0.163734199021119 |
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Relation with AD stages for PGGT1B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1159671 | chr5_115205885_- | 0.00067413767471029 | 0.322136277994821 |
| CER | ADediting_1159673 | chr5_115205895_- | 0.00055622131090498 | 0.326812080705348 |
| CER | ADediting_1159707 | chr5_115206680_- | 0.0012164420125731 | 0.307295435869257 |
| CER | ADediting_1159732 | chr5_115206751_- | 0.00150736192714236 | 0.301709579404843 |
| CER | ADediting_1159741 | chr5_115206791_- | 0.000334584307205695 | 0.338827818427235 |
| TCX | ADediting_1159657 | chr5_115205836_- | 0.00116113433061769 | 0.311311558179546 |
| TCX | ADediting_1159658 | chr5_115205840_- | 9.77112075511771e-05 | 0.369341013270473 |
| TCX | ADediting_1159659 | chr5_115205841_- | 3.60985589676184e-05 | 0.389875678363059 |
| TCX | ADediting_1159661 | chr5_115205845_- | 7.50119608895436e-06 | 0.419743129025862 |
| TCX | ADediting_1159689 | chr5_115206031_- | 0.00081598281148961 | 0.320307693626157 |
| TCX | ADediting_1159695 | chr5_115206616_- | 3.55122874548657e-06 | 0.433015222342124 |
| TCX | ADediting_1159704 | chr5_115206667_- | 0.00110125103814342 | 0.312679769311133 |
| TCX | ADediting_1159737 | chr5_115206780_- | 0.000420904055116708 | 0.336480474407741 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000103898876580457 | 0.364769542272751 |
| TCX | 2.4414154995396e-07 | 0.476412543006397 |
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RelatedDrugs for PGGT1B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PGGT1B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| PGGT1B | C0024121 | Lung Neoplasms | 1 | CTD_human |
| PGGT1B | C0242379 | Malignant neoplasm of lung | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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