|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for GPRC5B |
 Gene summary |
| Gene information | Gene symbol | GPRC5B | Gene ID | 51704 |
| Gene name | G protein-coupled receptor class C group 5 member B | |
| Synonyms | RAIG-2|RAIG2 | |
| Cytomap | 16p12.3 | |
| Type of gene | protein-coding | |
| Description | G-protein coupled receptor family C group 5 member BG protein-coupled receptor, family C, group 1, member Bretinoic acid responsive gene proteinretinoic acid-induced gene 2 protein | |
| Modification date | 20200322 | |
| UniProtAcc | Q9NZH0, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for GPRC5B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_522077(19862655, -), ADediting_522078(19862668, -), ADediting_522079(19862673, -), ADediting_522080(19862674, -), ADediting_522081(19862693, -), ADediting_522082(19862697, -), ADediting_522083(19862701, -), ADediting_522084(19862702, -), ADediting_522085(19862727, -), ADediting_522086(19862736, -), ADediting_522087(19862751, -), ADediting_522088(19862754, -), ADediting_522089(19862760, -), ADediting_522090(19862768, -), ADediting_522091(19862777, -), ADediting_522092(19862785, -), ADediting_522093(19862793, -), ADediting_522094(19862795, -), ADediting_522095(19862830, -), ADediting_522096(19862834, -), ADediting_522097(19862849, -), ADediting_522098(19862854, -), ADediting_522099(19862860, -), ADediting_522100(19862870, -), ADediting_522101(19863241, -), ADediting_522102(19863255, -), ADediting_522103(19863260, -), ADediting_522104(19863286, -), ADediting_522105(19863296, -), ADediting_522106(19863587, -), ADediting_522107(19863603, -), ADediting_522108(19863622, -), ADediting_522109(19863651, -), ADediting_522110(19863659, -), ADediting_522111(19863667, -), ADediting_522112(19863670, -), ADediting_522113(19863671, -), ADediting_522114(19863672, -), ADediting_522115(19863673, -), ADediting_522116(19863674, -), ADediting_522117(19863680, -), ADediting_522118(19863681, -), ADediting_522119(19863696, -), ADediting_522120(19863704, -), ADediting_522121(19863706, -), ADediting_522122(19863716, -), ADediting_522123(19863727, -), ADediting_522124(19863730, -), ADediting_522125(19863738, -), ADediting_522126(19863790, -), ADediting_522127(19863792, -), ADediting_522128(19863814, -), ADediting_522129(19864980, -), ADediting_522130(19865002, -), ADediting_522131(19865007, -), ADediting_522132(19865015, -), ADediting_522133(19865033, -), ADediting_522134(19865043, -), ADediting_522135(19865065, -), ADediting_522136(19865108, -), ADediting_522137(19865116, -), ADediting_522138(19865133, -), ADediting_522139(19865147, -), ADediting_522140(19865156, -), ADediting_522141(19865419, -), ADediting_522142(19865429, -), ADediting_522143(19866006, -), ADediting_522144(19866018, -), ADediting_522145(19866027, -), ADediting_522146(19866064, -), ADediting_522147(19866065, -), ADediting_522148(19866091, -), ADediting_522149(19866173, -), ADediting_522150(19866429, -), ADediting_522151(19866435, -), ADediting_522152(19866442, -), ADediting_522153(19866446, -), ADediting_522154(19866453, -), ADediting_522155(19866454, -), ADediting_522156(19866462, -), ADediting_522157(19866499, -), ADediting_522158(19866517, -), ADediting_522159(19866525, -), ADediting_522160(19866605, -), ADediting_522161(19866606, -), ADediting_522162(19866607, -), ADediting_522163(19868291, -), ADediting_522164(19868334, -), ADediting_522165(19869149, -), ADediting_522166(19869207, -), ADediting_522167(19869246, -), ADediting_522168(19869332, -), ADediting_522169(19869827, -), ADediting_522170(19869837, -), ADediting_522171(19869842, -), ADediting_522172(19869854, -), ADediting_522173(19869880, -), ADediting_522174(19869892, -), ADediting_522175(19869945, -), ADediting_522176(19869953, -), ADediting_522177(19869963, -), ADediting_522178(19869980, -), ADediting_522179(19869989, -), ADediting_522180(19869992, -), ADediting_522181(19869993, -), ADediting_522182(19870013, -), ADediting_522183(19870023, -), ADediting_522184(19870031, -), ADediting_522185(19870037, -), ADediting_522186(19870044, -), ADediting_522187(19870075, -), ADediting_522188(19871065, -), ADediting_522189(19871165, -), ADediting_522190(19873401, -), ADediting_522191(19873675, -), ADediting_522192(19873904, -), ADediting_522193(19873917, -), ADediting_522194(19873918, -), ADediting_522195(19873940, -), ADediting_522196(19874635, -), ADediting_522197(19874704, -), ADediting_522198(19876232, -), ADediting_522199(19876233, -), ADediting_522200(19876243, -), ADediting_522201(19876251, -), ADediting_522202(19876286, -), ADediting_522203(19876368, -), ADediting_522204(19876404, -), ADediting_522207(19877980, -), ADediting_522208(19878030, -), ADediting_522209(19878036, -), ADediting_522210(19878087, -), ADediting_522211(19878136, -), ADediting_522212(19878489, -), ADediting_522213(19878490, -), ADediting_1541280(19864971, -), ADediting_1541281(19865137, -), ADediting_1541282(19868028, -), ADediting_1541283(19869146, -), ADediting_1541284(19869943, -), ADediting_1541285(19876258, -), ADediting_1541286(19877942, -), ADediting_1541287(19878487, -), |
Top |
RNA editing positional annotations for GPRC5B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_522077 | chr16_19862655_- | intronic |
| ADediting_522078 | chr16_19862668_- | intronic |
| ADediting_522079 | chr16_19862673_- | intronic |
| ADediting_522080 | chr16_19862674_- | intronic |
| ADediting_522081 | chr16_19862693_- | intronic |
| ADediting_522082 | chr16_19862697_- | intronic |
| ADediting_522083 | chr16_19862701_- | intronic |
| ADediting_522084 | chr16_19862702_- | intronic |
| ADediting_522085 | chr16_19862727_- | intronic |
| ADediting_522086 | chr16_19862736_- | intronic |
| ADediting_522087 | chr16_19862751_- | intronic |
| ADediting_522088 | chr16_19862754_- | intronic |
| ADediting_522089 | chr16_19862760_- | intronic |
| ADediting_522090 | chr16_19862768_- | intronic |
| ADediting_522091 | chr16_19862777_- | intronic |
| ADediting_522092 | chr16_19862785_- | intronic |
| ADediting_522093 | chr16_19862793_- | intronic |
| ADediting_522094 | chr16_19862795_- | intronic |
| ADediting_522095 | chr16_19862830_- | intronic |
| ADediting_522096 | chr16_19862834_- | intronic |
| ADediting_522097 | chr16_19862849_- | intronic |
| ADediting_522098 | chr16_19862854_- | intronic |
| ADediting_522099 | chr16_19862860_- | intronic |
| ADediting_522100 | chr16_19862870_- | intronic |
| ADediting_522101 | chr16_19863241_- | intronic |
| ADediting_522102 | chr16_19863255_- | intronic |
| ADediting_522103 | chr16_19863260_- | intronic |
| ADediting_522104 | chr16_19863286_- | intronic |
| ADediting_522105 | chr16_19863296_- | intronic |
| ADediting_522106 | chr16_19863587_- | intronic |
| ADediting_522107 | chr16_19863603_- | intronic |
| ADediting_522108 | chr16_19863622_- | intronic |
| ADediting_522109 | chr16_19863651_- | intronic |
| ADediting_522110 | chr16_19863659_- | intronic |
| ADediting_522111 | chr16_19863667_- | intronic |
| ADediting_522112 | chr16_19863670_- | intronic |
| ADediting_522113 | chr16_19863671_- | intronic |
| ADediting_522114 | chr16_19863672_- | intronic |
| ADediting_522115 | chr16_19863673_- | intronic |
| ADediting_522116 | chr16_19863674_- | intronic |
| ADediting_522117 | chr16_19863680_- | intronic |
| ADediting_522118 | chr16_19863681_- | intronic |
| ADediting_522119 | chr16_19863696_- | intronic |
| ADediting_522120 | chr16_19863704_- | intronic |
| ADediting_522121 | chr16_19863706_- | intronic |
| ADediting_522122 | chr16_19863716_- | intronic |
| ADediting_522123 | chr16_19863727_- | intronic |
| ADediting_522124 | chr16_19863730_- | intronic |
| ADediting_522125 | chr16_19863738_- | intronic |
| ADediting_522126 | chr16_19863790_- | intronic |
| ADediting_522127 | chr16_19863792_- | intronic |
| ADediting_522128 | chr16_19863814_- | intronic |
| ADediting_522129 | chr16_19864980_- | intronic |
| ADediting_522130 | chr16_19865002_- | intronic |
| ADediting_522131 | chr16_19865007_- | intronic |
| ADediting_522132 | chr16_19865015_- | intronic |
| ADediting_522133 | chr16_19865033_- | intronic |
| ADediting_522134 | chr16_19865043_- | intronic |
| ADediting_522135 | chr16_19865065_- | intronic |
| ADediting_522136 | chr16_19865108_- | intronic |
| ADediting_522137 | chr16_19865116_- | intronic |
| ADediting_522138 | chr16_19865133_- | intronic |
| ADediting_522139 | chr16_19865147_- | intronic |
| ADediting_522140 | chr16_19865156_- | intronic |
| ADediting_522141 | chr16_19865419_- | intronic |
| ADediting_522142 | chr16_19865429_- | intronic |
| ADediting_522143 | chr16_19866006_- | intronic |
| ADediting_522144 | chr16_19866018_- | intronic |
| ADediting_522145 | chr16_19866027_- | intronic |
| ADediting_522146 | chr16_19866064_- | intronic |
| ADediting_522147 | chr16_19866065_- | intronic |
| ADediting_522148 | chr16_19866091_- | intronic |
| ADediting_522149 | chr16_19866173_- | intronic |
| ADediting_522150 | chr16_19866429_- | intronic |
| ADediting_522151 | chr16_19866435_- | intronic |
| ADediting_522152 | chr16_19866442_- | intronic |
| ADediting_522153 | chr16_19866446_- | intronic |
| ADediting_522154 | chr16_19866453_- | intronic |
| ADediting_522155 | chr16_19866454_- | intronic |
| ADediting_522156 | chr16_19866462_- | intronic |
| ADediting_522157 | chr16_19866499_- | intronic |
| ADediting_522158 | chr16_19866517_- | intronic |
| ADediting_522159 | chr16_19866525_- | intronic |
| ADediting_522160 | chr16_19866605_- | intronic |
| ADediting_522161 | chr16_19866606_- | intronic |
| ADediting_522162 | chr16_19866607_- | intronic |
| ADediting_522163 | chr16_19868291_- | intronic |
| ADediting_522164 | chr16_19868334_- | intronic |
| ADediting_522165 | chr16_19869149_- | intronic |
| ADediting_522166 | chr16_19869207_- | intronic |
| ADediting_522167 | chr16_19869246_- | intronic |
| ADediting_522168 | chr16_19869332_- | intronic |
| ADediting_522169 | chr16_19869827_- | intronic |
| ADediting_522170 | chr16_19869837_- | intronic |
| ADediting_522171 | chr16_19869842_- | intronic |
| ADediting_522172 | chr16_19869854_- | intronic |
| ADediting_522173 | chr16_19869880_- | intronic |
| ADediting_522174 | chr16_19869892_- | intronic |
| ADediting_522175 | chr16_19869945_- | intronic |
| ADediting_522176 | chr16_19869953_- | intronic |
| ADediting_522177 | chr16_19869963_- | intronic |
| ADediting_522178 | chr16_19869980_- | intronic |
| ADediting_522179 | chr16_19869989_- | intronic |
| ADediting_522180 | chr16_19869992_- | intronic |
| ADediting_522181 | chr16_19869993_- | intronic |
| ADediting_522182 | chr16_19870013_- | intronic |
| ADediting_522183 | chr16_19870023_- | intronic |
| ADediting_522184 | chr16_19870031_- | intronic |
| ADediting_522185 | chr16_19870037_- | intronic |
| ADediting_522186 | chr16_19870044_- | intronic |
| ADediting_522187 | chr16_19870075_- | intronic |
| ADediting_522188 | chr16_19871065_- | intronic |
| ADediting_522189 | chr16_19871165_- | intronic |
| ADediting_522190 | chr16_19873401_- | intronic |
| ADediting_522191 | chr16_19873675_- | intronic |
| ADediting_522192 | chr16_19873904_- | intronic |
| ADediting_522193 | chr16_19873917_- | intronic |
| ADediting_522194 | chr16_19873918_- | intronic |
| ADediting_522195 | chr16_19873940_- | intronic |
| ADediting_522196 | chr16_19874635_- | intronic |
| ADediting_522197 | chr16_19874704_- | intronic |
| ADediting_522198 | chr16_19876232_- | intronic |
| ADediting_522199 | chr16_19876233_- | intronic |
| ADediting_522200 | chr16_19876243_- | intronic |
| ADediting_522201 | chr16_19876251_- | intronic |
| ADediting_522202 | chr16_19876286_- | intronic |
| ADediting_522203 | chr16_19876368_- | intronic |
| ADediting_522204 | chr16_19876404_- | intronic |
| ADediting_522207 | chr16_19877980_- | intronic |
| ADediting_522208 | chr16_19878030_- | intronic |
| ADediting_522209 | chr16_19878036_- | intronic |
| ADediting_522210 | chr16_19878087_- | intronic |
| ADediting_522211 | chr16_19878136_- | intronic |
| ADediting_522212 | chr16_19878489_- | intronic |
| ADediting_522213 | chr16_19878490_- | intronic |
| ADediting_1541280 | chr16_19864971_- | intronic |
| ADediting_1541281 | chr16_19865137_- | intronic |
| ADediting_1541282 | chr16_19868028_- | intronic |
| ADediting_1541283 | chr16_19869146_- | intronic |
| ADediting_1541284 | chr16_19869943_- | intronic |
| ADediting_1541285 | chr16_19876258_- | intronic |
| ADediting_1541286 | chr16_19877942_- | intronic |
| ADediting_1541287 | chr16_19878487_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_522077 | chr16_19862655_- | SINE | Alu | Name=AluSz6 |
| ADediting_522078 | chr16_19862668_- | SINE | Alu | Name=AluSz6 |
| ADediting_522079 | chr16_19862673_- | SINE | Alu | Name=AluSz6 |
| ADediting_522080 | chr16_19862674_- | SINE | Alu | Name=AluSz6 |
| ADediting_522081 | chr16_19862693_- | SINE | Alu | Name=AluSz6 |
| ADediting_522082 | chr16_19862697_- | SINE | Alu | Name=AluSz6 |
| ADediting_522083 | chr16_19862701_- | SINE | Alu | Name=AluSz6 |
| ADediting_522084 | chr16_19862702_- | SINE | Alu | Name=AluSz6 |
| ADediting_522085 | chr16_19862727_- | SINE | Alu | Name=AluSz6 |
| ADediting_522086 | chr16_19862736_- | SINE | Alu | Name=AluSz6 |
| ADediting_522087 | chr16_19862751_- | SINE | Alu | Name=AluSz6 |
| ADediting_522088 | chr16_19862754_- | SINE | Alu | Name=AluSz6 |
| ADediting_522089 | chr16_19862760_- | SINE | Alu | Name=AluSz6 |
| ADediting_522090 | chr16_19862768_- | SINE | Alu | Name=AluSz6 |
| ADediting_522091 | chr16_19862777_- | SINE | Alu | Name=AluSz6 |
| ADediting_522092 | chr16_19862785_- | SINE | Alu | Name=AluSz6 |
| ADediting_522093 | chr16_19862793_- | SINE | Alu | Name=AluSz6 |
| ADediting_522094 | chr16_19862795_- | SINE | Alu | Name=AluSz6 |
| ADediting_522095 | chr16_19862830_- | SINE | Alu | Name=AluSz6 |
| ADediting_522096 | chr16_19862834_- | SINE | Alu | Name=AluSz6 |
| ADediting_522097 | chr16_19862849_- | SINE | Alu | Name=AluSz6 |
| ADediting_522098 | chr16_19862854_- | SINE | Alu | Name=AluSz6 |
| ADediting_522099 | chr16_19862860_- | SINE | Alu | Name=AluSz6 |
| ADediting_522100 | chr16_19862870_- | SINE | Alu | Name=AluSz6 |
| ADediting_522101 | chr16_19863241_- | SINE | Alu | Name=AluJo |
| ADediting_522102 | chr16_19863255_- | SINE | Alu | Name=AluJo |
| ADediting_522103 | chr16_19863260_- | SINE | Alu | Name=AluJo |
| ADediting_522104 | chr16_19863286_- | SINE | Alu | Name=AluJo |
| ADediting_522105 | chr16_19863296_- | SINE | Alu | Name=AluJo |
| ADediting_522106 | chr16_19863587_- | SINE | Alu | Name=AluSz |
| ADediting_522107 | chr16_19863603_- | SINE | Alu | Name=AluSz |
| ADediting_522108 | chr16_19863622_- | SINE | Alu | Name=AluSz |
| ADediting_522109 | chr16_19863651_- | SINE | Alu | Name=AluSz |
| ADediting_522110 | chr16_19863659_- | SINE | Alu | Name=AluSz |
| ADediting_522111 | chr16_19863667_- | SINE | Alu | Name=AluSz |
| ADediting_522112 | chr16_19863670_- | SINE | Alu | Name=AluSz |
| ADediting_522113 | chr16_19863671_- | SINE | Alu | Name=AluSz |
| ADediting_522114 | chr16_19863672_- | SINE | Alu | Name=AluSz |
| ADediting_522115 | chr16_19863673_- | SINE | Alu | Name=AluSz |
| ADediting_522116 | chr16_19863674_- | SINE | Alu | Name=AluSz |
| ADediting_522117 | chr16_19863680_- | SINE | Alu | Name=AluSz |
| ADediting_522118 | chr16_19863681_- | SINE | Alu | Name=AluSz |
| ADediting_522119 | chr16_19863696_- | SINE | Alu | Name=AluSz |
| ADediting_522120 | chr16_19863704_- | SINE | Alu | Name=AluSz |
| ADediting_522121 | chr16_19863706_- | SINE | Alu | Name=AluSz |
| ADediting_522122 | chr16_19863716_- | SINE | Alu | Name=AluSz |
| ADediting_522123 | chr16_19863727_- | SINE | Alu | Name=AluSz |
| ADediting_522124 | chr16_19863730_- | SINE | Alu | Name=AluSz |
| ADediting_522125 | chr16_19863738_- | SINE | Alu | Name=AluSz |
| ADediting_522126 | chr16_19863790_- | SINE | Alu | Name=AluSz |
| ADediting_522127 | chr16_19863792_- | SINE | Alu | Name=AluSz |
| ADediting_522128 | chr16_19863814_- | DNA | hAT-Charlie | Name=MER1B |
| ADediting_522129 | chr16_19864980_- | SINE | Alu | Name=AluJb |
| ADediting_522130 | chr16_19865002_- | SINE | Alu | Name=AluJb |
| ADediting_522131 | chr16_19865007_- | SINE | Alu | Name=AluJb |
| ADediting_522132 | chr16_19865015_- | SINE | Alu | Name=AluJb |
| ADediting_522133 | chr16_19865033_- | SINE | Alu | Name=AluJb |
| ADediting_522134 | chr16_19865043_- | SINE | Alu | Name=AluJb |
| ADediting_522135 | chr16_19865065_- | SINE | Alu | Name=AluJb |
| ADediting_522136 | chr16_19865108_- | SINE | Alu | Name=AluJb |
| ADediting_522137 | chr16_19865116_- | SINE | Alu | Name=AluJb |
| ADediting_522138 | chr16_19865133_- | SINE | Alu | Name=AluJb |
| ADediting_522139 | chr16_19865147_- | SINE | Alu | Name=AluJb |
| ADediting_522140 | chr16_19865156_- | SINE | Alu | Name=AluJb |
| ADediting_522141 | chr16_19865419_- | DNA | TcMar-Tigger | Name=MER6B |
| ADediting_522142 | chr16_19865429_- | DNA | TcMar-Tigger | Name=MER6B |
| ADediting_522143 | chr16_19866006_- | SINE | Alu | Name=AluSx3 |
| ADediting_522144 | chr16_19866018_- | SINE | Alu | Name=AluSx3 |
| ADediting_522145 | chr16_19866027_- | SINE | Alu | Name=AluSx3 |
| ADediting_522146 | chr16_19866064_- | SINE | Alu | Name=AluSx3 |
| ADediting_522147 | chr16_19866065_- | SINE | Alu | Name=AluSx3 |
| ADediting_522148 | chr16_19866091_- | SINE | Alu | Name=AluSx3 |
| ADediting_522149 | chr16_19866173_- | SINE | Alu | Name=AluSx3 |
| ADediting_522150 | chr16_19866429_- | SINE | Alu | Name=AluSz |
| ADediting_522151 | chr16_19866435_- | SINE | Alu | Name=AluSz |
| ADediting_522152 | chr16_19866442_- | SINE | Alu | Name=AluSz |
| ADediting_522153 | chr16_19866446_- | SINE | Alu | Name=AluSz |
| ADediting_522154 | chr16_19866453_- | SINE | Alu | Name=AluSz |
| ADediting_522155 | chr16_19866454_- | SINE | Alu | Name=AluSz |
| ADediting_522156 | chr16_19866462_- | SINE | Alu | Name=AluSz |
| ADediting_522157 | chr16_19866499_- | SINE | Alu | Name=AluSz |
| ADediting_522158 | chr16_19866517_- | SINE | Alu | Name=AluSz |
| ADediting_522159 | chr16_19866525_- | SINE | Alu | Name=AluSz |
| ADediting_522160 | chr16_19866605_- | SINE | Alu | Name=AluSz |
| ADediting_522161 | chr16_19866606_- | SINE | Alu | Name=AluSz |
| ADediting_522162 | chr16_19866607_- | SINE | Alu | Name=AluSz |
| ADediting_522163 | chr16_19868291_- | SINE | Alu | Name=AluSp |
| ADediting_522164 | chr16_19868334_- | SINE | Alu | Name=AluSp |
| ADediting_522165 | chr16_19869149_- | SINE | Alu | Name=AluSx |
| ADediting_522166 | chr16_19869207_- | SINE | Alu | Name=AluSx |
| ADediting_522167 | chr16_19869246_- | SINE | Alu | Name=AluSx |
| ADediting_522168 | chr16_19869332_- | SINE | Alu | Name=AluSx |
| ADediting_522169 | chr16_19869827_- | SINE | Alu | Name=AluJb |
| ADediting_522170 | chr16_19869837_- | SINE | Alu | Name=AluJb |
| ADediting_522171 | chr16_19869842_- | SINE | Alu | Name=AluJb |
| ADediting_522172 | chr16_19869854_- | SINE | Alu | Name=AluJb |
| ADediting_522173 | chr16_19869880_- | SINE | Alu | Name=AluJb |
| ADediting_522174 | chr16_19869892_- | SINE | Alu | Name=AluJb |
| ADediting_522175 | chr16_19869945_- | SINE | Alu | Name=AluJb |
| ADediting_522176 | chr16_19869953_- | SINE | Alu | Name=AluJb |
| ADediting_522177 | chr16_19869963_- | SINE | Alu | Name=AluJb |
| ADediting_522178 | chr16_19869980_- | SINE | Alu | Name=AluJb |
| ADediting_522179 | chr16_19869989_- | SINE | Alu | Name=AluJb |
| ADediting_522180 | chr16_19869992_- | SINE | Alu | Name=AluJb |
| ADediting_522181 | chr16_19869993_- | SINE | Alu | Name=AluJb |
| ADediting_522182 | chr16_19870013_- | SINE | Alu | Name=AluJb |
| ADediting_522183 | chr16_19870023_- | SINE | Alu | Name=AluJb |
| ADediting_522184 | chr16_19870031_- | SINE | Alu | Name=AluJb |
| ADediting_522185 | chr16_19870037_- | SINE | Alu | Name=AluJb |
| ADediting_522186 | chr16_19870044_- | SINE | Alu | Name=AluJb |
| ADediting_522187 | chr16_19870075_- | SINE | Alu | Name=AluJb |
| ADediting_522188 | chr16_19871065_- | SINE | Alu | Name=AluJo |
| ADediting_522189 | chr16_19871165_- | SINE | Alu | Name=AluJo |
| ADediting_522190 | chr16_19873401_- | SINE | Alu | Name=AluSg |
| ADediting_522191 | chr16_19873675_- | SINE | MIR | Name=MIR |
| ADediting_522192 | chr16_19873904_- | SINE | Alu | Name=AluSx |
| ADediting_522193 | chr16_19873917_- | SINE | Alu | Name=AluSx |
| ADediting_522194 | chr16_19873918_- | SINE | Alu | Name=AluSx |
| ADediting_522195 | chr16_19873940_- | SINE | Alu | Name=AluSx |
| ADediting_522196 | chr16_19874635_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522197 | chr16_19874704_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522198 | chr16_19876232_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522199 | chr16_19876233_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522200 | chr16_19876243_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522201 | chr16_19876251_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522202 | chr16_19876286_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522203 | chr16_19876368_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_522207 | chr16_19877980_- | SINE | Alu | Name=AluSz |
| ADediting_522208 | chr16_19878030_- | SINE | Alu | Name=AluSz |
| ADediting_522209 | chr16_19878036_- | SINE | Alu | Name=AluSz |
| ADediting_522210 | chr16_19878087_- | SINE | Alu | Name=AluSz |
| ADediting_522211 | chr16_19878136_- | SINE | Alu | Name=AluSz |
| ADediting_522212 | chr16_19878489_- | SINE | Alu | Name=AluSx1 |
| ADediting_522213 | chr16_19878490_- | SINE | Alu | Name=AluSx1 |
| ADediting_1541280 | chr16_19864971_- | SINE | Alu | Name=AluJb |
| ADediting_1541281 | chr16_19865137_- | SINE | Alu | Name=AluJb |
| ADediting_1541282 | chr16_19868028_- | SINE | Alu | Name=AluSg |
| ADediting_1541283 | chr16_19869146_- | SINE | Alu | Name=AluSx |
| ADediting_1541284 | chr16_19869943_- | SINE | Alu | Name=AluJb |
| ADediting_1541285 | chr16_19876258_- | DNA | hAT-Charlie | Name=MER20 |
| ADediting_1541286 | chr16_19877942_- | SINE | Alu | Name=AluSz |
| ADediting_1541287 | chr16_19878487_- | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for GPRC5B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for GPRC5B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for GPRC5B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for GPRC5B |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337758 | chr7_5495892_- | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-589-5p | chr16 | 19859517 | 19859524 | 8mer-1a | 19859517 | 19859538 | 156 | -26.73 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000167191.12 | ENST00000569479.5 | GPRC5B-209 | hsa-miR-589-5p | chr16 | 19859517 | 19859524 | 8mer-1a | 19859517 | 19859538 | 156 | -26.73 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-337-3p | chr16 | 19857587 | 19857593 | 7mer-m8 | 19857586 | 19857607 | 149 | -15.73 |
| ADediting_286380 | chr11_79422188_- | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-5579-3p | chr16 | 19859019 | 19859025 | 7mer-m8 | 19859018 | 19859039 | 154 | -20.1 |
| ADediting_286380 | chr11_79422188_- | ENSG00000167191.12 | ENST00000569479.5 | GPRC5B-209 | hsa-miR-5579-3p | chr16 | 19859019 | 19859025 | 7mer-m8 | 19859018 | 19859039 | 154 | -20.1 |
| ADediting_496066 | chr15_66496985_- | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-4512 | chr16 | 19859768 | 19859774 | 7mer-m8 | 19859767 | 19859787 | 150 | -27.96 |
| ADediting_496066 | chr15_66496985_- | ENSG00000167191.12 | ENST00000569479.5 | GPRC5B-209 | hsa-miR-4512 | chr16 | 19859768 | 19859774 | 7mer-m8 | 19859767 | 19859787 | 150 | -27.96 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-5585-3p | chr16 | 19858489 | 19858495 | 7mer-m8 | 19858488 | 19858513 | 146 | -12.98 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-5585-3p | chr16 | 19859249 | 19859256 | 8mer-1a | 19859249 | 19859270 | 162 | -20.86 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000167191.12 | ENST00000569479.5 | GPRC5B-209 | hsa-miR-5585-3p | chr16 | 19859249 | 19859256 | 8mer-1a | 19859249 | 19859270 | 162 | -20.86 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-5581-3p | chr16 | 19859167 | 19859174 | 8mer-1a | 19859167 | 19859191 | 150 | -20.24 |
| ADediting_107020 | chr1_37500952_- | ENSG00000167191.12 | ENST00000569479.5 | GPRC5B-209 | hsa-miR-5581-3p | chr16 | 19859167 | 19859174 | 8mer-1a | 19859167 | 19859191 | 150 | -20.24 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-4477b | chr16 | 19858863 | 19858869 | 7mer-m8 | 19858862 | 19858882 | 147 | -10.02 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-4477b | chr16 | 19858863 | 19858869 | 7mer-m8 | 19858862 | 19858882 | 147 | -10.02 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-556-3p | chr16 | 19857157 | 19857164 | 8mer-1a | 19857157 | 19857178 | 152 | -9.11 |
| ADediting_496066 | chr15_66496985_- | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-4512 | chr16 | 19858964 | 19858971 | 8mer-1a | 19858964 | 19858985 | 140 | -17.2 |
| ADediting_496066 | chr15_66496985_- | ENSG00000167191.12 | ENST00000300571.7 | GPRC5B-201 | hsa-miR-4512 | chr16 | 19859865 | 19859871 | 7mer-m8 | 19859864 | 19859886 | 150 | -18.9 |
| ADediting_496066 | chr15_66496985_- | ENSG00000167191.12 | ENST00000569479.5 | GPRC5B-209 | hsa-miR-4512 | chr16 | 19859865 | 19859871 | 7mer-m8 | 19859864 | 19859886 | 150 | -18.9 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for GPRC5B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for GPRC5B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_522077 | chr16_19862655_- | 0.139977007631962 | 0.121073897640928 | 0.20579354085123 | -0.10389385532271 | 4.15618296030274e-06 | 0.365815975887329 |
| TCX | ADediting_522080 | chr16_19862674_- | 0.767608459735966 | -0.0243277888276622 | 0.0434185776578382 | -0.165152028479415 | 0.000172878186782415 | 0.301984584169234 |
| DLPFC | ADediting_522081 | chr16_19862693_- | 0.0667909134877533 | 0.104249150868075 | 0.151213678713694 | 0.0817108831317646 | 3.40390707880839e-09 | 0.327720142432096 |
| CER | ADediting_522083 | chr16_19862701_- | 0.00200866942002719 | 0.250278665516057 | 1.2348201204131e-05 | 0.348575454543661 | 0.0536366378405002 | 0.157895228923499 |
| TCX | ADediting_522083 | chr16_19862701_- | 0.711735869721444 | -0.0304191384658867 | 0.000384307890319963 | -0.286213147829972 | 1.51541426669138e-08 | 0.441814276206936 |
| TCX | ADediting_522089 | chr16_19862760_- | 0.983879781012596 | 0.00166365345511484 | 0.152256804744631 | -0.117467666044622 | 5.45836605760572e-06 | 0.361593833085272 |
| CER | ADediting_522091 | chr16_19862777_- | 0.140293096754579 | 0.120978117135119 | 2.3144719199889e-05 | 0.338148908352999 | 0.0104154543266669 | 0.208602506155462 |
| TCX | ADediting_522091 | chr16_19862777_- | 0.345804328136495 | -0.0775084464143742 | 0.000467351654712172 | -0.282207636114505 | 1.16944583803015e-09 | 0.471113207515547 |
| TCX | ADediting_522092 | chr16_19862785_- | 0.471463331561381 | -0.0592398362668606 | 0.00203324577121322 | -0.249995141070997 | 2.86334567746156e-05 | 0.334530781118648 |
| TCX | ADediting_522093 | chr16_19862793_- | 0.0899109559544176 | -0.138956855139012 | 1.59643519518789e-05 | -0.344357648211033 | 9.86952141466755e-06 | 0.352205998868818 |
| TCX | ADediting_522096 | chr16_19862834_- | 0.857519140946035 | -0.0147816698560064 | 0.00207552516115973 | -0.249514589427457 | 1.61759173288122e-08 | 0.441030678462323 |
| AC | ADediting_522097 | chr16_19862849_- | 0.547503227029831 | 0.0382201985052322 | 0.364061176164704 | -0.0576462086575605 | 3.23406345999544e-10 | 0.384192639828433 |
| CER | ADediting_522097 | chr16_19862849_- | 0.0039042618361984 | 0.234295372909436 | 1.10189607636191e-05 | 0.350426516524048 | 0.0121947289563963 | 0.204198621288896 |
| TCX | ADediting_522097 | chr16_19862849_- | 0.8603170391966 | 0.0144883875050316 | 0.00310221998234269 | -0.239942078666872 | 3.85070613333134e-05 | 0.329417181540224 |
| CER | ADediting_522098 | chr16_19862854_- | 0.0125950288261322 | 0.203286243518548 | 0.000145419154944433 | 0.305283828621793 | 0.00024406237160206 | 0.295287462784676 |
| TCX | ADediting_522098 | chr16_19862854_- | 0.827915524919591 | -0.0178969507621346 | 0.00139948545674994 | -0.258563341098323 | 8.24866606833652e-08 | 0.420794408813177 |
| TCX | ADediting_522099 | chr16_19862860_- | 0.679332532691818 | 0.0340267276915589 | 0.00594972775316605 | -0.223600341936088 | 1.00130454954064e-07 | 0.418295954283706 |
| DLPFC | ADediting_522100 | chr16_19862870_- | 1.28051284877979e-05 | 0.24502674431261 | 2.39353709758818e-08 | 0.310363000704667 | 0.035669009949311 | 0.119365966213476 |
| CER | ADediting_522108 | chr16_19863622_- | 0.000463867565222542 | 0.282361939827326 | 1.75464978260236e-06 | 0.378794907323121 | 0.0110328797533168 | 0.207004147662645 |
| TCX | ADediting_522108 | chr16_19863622_- | 0.161905468413172 | 0.114785087972739 | 0.0355950132273455 | -0.171748317304989 | 8.02597571656033e-14 | 0.561200651897089 |
| CER | ADediting_522109 | chr16_19863651_- | 0.116428380922722 | 0.12872825297385 | 0.000712564561069469 | 0.273363153765186 | 0.00018444364849907 | 0.300739238953951 |
| TCX | ADediting_522109 | chr16_19863651_- | 0.47499593526019 | -0.0587695871568863 | 0.000186119241901586 | -0.300564875095986 | 3.63519653323884e-07 | 0.401139248419472 |
| DLPFC | ADediting_522110 | chr16_19863659_- | 2.36851405238371e-05 | 0.237589524770172 | 5.67859185883661e-08 | 0.302303350837676 | 0.00421398372980228 | 0.162111119689287 |
| CER | ADediting_522110 | chr16_19863659_- | 0.00549854734326746 | 0.225638624909456 | 1.90725795699458e-05 | 0.341400339679418 | 0.0839980012870856 | 0.141558986580486 |
| TCX | ADediting_522111 | chr16_19863667_- | 0.567528838899116 | -0.0470463811699187 | 0.000129916138339414 | -0.307413283135758 | 1.83173763399073e-08 | 0.439532108230475 |
| TCX | ADediting_522114 | chr16_19863672_- | 0.190588179887448 | 0.107455639584668 | 0.421891069734585 | -0.0660574295272858 | 3.64443251221858e-05 | 0.330374339756291 |
| TCX | ADediting_522117 | chr16_19863680_- | 0.0506690747976113 | -0.159875150850884 | 8.82486505194211e-06 | -0.354002207611891 | 2.53327103261912e-06 | 0.373336005808968 |
| TCX | ADediting_522127 | chr16_19863792_- | 0.713435537571121 | -0.0302315545421375 | 0.000296467946828338 | -0.29143662142144 | 1.58619317254605e-05 | 0.344464085370404 |
| TCX | ADediting_522129 | chr16_19864980_- | 0.822826796208414 | 0.0184348941972337 | 0.0047274848171191 | -0.229496388653232 | 3.29286224201579e-07 | 0.402489864328275 |
| TCX | ADediting_522130 | chr16_19865002_- | 0.00743823112114554 | 0.217733272096511 | 0.580347028046608 | -0.0454995261706223 | 1.6631076478151e-05 | 0.343680124857623 |
| CER | ADediting_522133 | chr16_19865033_- | 0.000968420353708396 | 0.266739794723198 | 6.39654162139595e-07 | 0.393305861440293 | 0.013046382350052 | 0.202287492118889 |
| CER | ADediting_522134 | chr16_19865043_- | 2.15899697963762e-06 | 0.375724555300091 | 6.88249344392238e-08 | 0.423110160557517 | 1.48612924023868e-05 | 0.345539508065965 |
| TCX | ADediting_522134 | chr16_19865043_- | 0.188796668610494 | 0.107888728601264 | 0.00706423944192806 | -0.219101669404429 | 2.99418635359646e-08 | 0.433536969562902 |
| PG | ADediting_522134 | chr16_19865043_- | 0.00697065148787442 | -0.19722720845291 | 0.0194557883199045 | -0.171220789707452 | 7.52022720188665e-06 | 0.321766517780575 |
| STG | ADediting_522134 | chr16_19865043_- | 0.259846106279509 | -0.124324228481588 | 0.0508686237355045 | -0.213778038205581 | 0.00187970750388452 | 0.334367900942269 |
| CER | ADediting_522140 | chr16_19865156_- | 2.21796982801657e-06 | 0.375323250463004 | 2.32848378716125e-07 | 0.407175584191033 | 0.0283579392655229 | 0.179049189025934 |
| CER | ADediting_522144 | chr16_19866018_- | 0.00197398488939901 | 0.250684211988403 | 3.65787277729321e-05 | 0.330310442097186 | 3.64642763258215e-05 | 0.330364840580008 |
| TCX | ADediting_522144 | chr16_19866018_- | 0.817683632700769 | -0.018979385015922 | 0.10492586203041 | -0.132912867202183 | 3.81121543937226e-06 | 0.367145837813144 |
| TCX | ADediting_522145 | chr16_19866027_- | 0.295661553014812 | 0.0859486470735729 | 0.139634104265673 | -0.121177989784109 | 5.40003362965348e-06 | 0.361761413001455 |
| TCX | ADediting_522146 | chr16_19866064_- | 0.695162424554973 | 0.0322566636698245 | 0.026873767368949 | -0.180739925776889 | 2.75881876792444e-05 | 0.335166309397597 |
| CER | ADediting_522147 | chr16_19866065_- | 0.0356575125578902 | 0.171690977031278 | 0.00604645702510203 | 0.223181381319396 | 1.2124024667957e-05 | 0.348874013810038 |
| TCX | ADediting_522147 | chr16_19866065_- | 0.350346938613162 | 0.0767836503029413 | 0.0330778927765042 | -0.174131611446654 | 5.56761524643351e-12 | 0.524582549140855 |
| CER | ADediting_522151 | chr16_19866435_- | 1.87678941303348e-05 | 0.341669290342544 | 5.41397794401164e-09 | 0.453920425510558 | 0.00202933441632759 | 0.250040055330977 |
| TCX | ADediting_522151 | chr16_19866435_- | 0.492345892717669 | 0.0564869787348108 | 0.0259893237432575 | -0.181785789696275 | 3.58552967686929e-07 | 0.4013274648795 |
| CER | ADediting_522152 | chr16_19866442_- | 0.000102445106391713 | 0.311848431546706 | 6.25061445592337e-08 | 0.424334736471041 | 0.0111094180650035 | 0.206811526454551 |
| TCX | ADediting_522152 | chr16_19866442_- | 0.392520810267439 | -0.0703166939298529 | 0.00356255949023923 | -0.236559927112889 | 3.73595798038759e-05 | 0.32994351753255 |
| CER | ADediting_522154 | chr16_19866453_- | 0.00193702302396784 | 0.251123575011568 | 6.96255367444215e-06 | 0.357771999139199 | 0.946283628330734 | 0.00554746377149612 |
| TCX | ADediting_522155 | chr16_19866454_- | 0.837627631816284 | -0.0168723330702421 | 0.00916828505713725 | -0.212103643741201 | 3.18357503767755e-07 | 0.402949410162034 |
| CER | ADediting_522157 | chr16_19866499_- | 9.87714335831622e-06 | 0.352193566726507 | 2.75567985912768e-07 | 0.404906891029462 | 1.19169268084261e-05 | 0.349154498100968 |
| TCX | ADediting_522157 | chr16_19866499_- | 0.868545076641702 | 0.0136269443087215 | 0.00277412352228962 | -0.242641365050804 | 5.37670145101586e-11 | 0.503026308480006 |
| DLPFC | ADediting_522158 | chr16_19866517_- | 0.288318693464552 | 0.0604963013700338 | 0.719718870778656 | -0.0204609559291442 | 4.03034602659244e-08 | 0.305531007156517 |
| CER | ADediting_522158 | chr16_19866517_- | 0.000645553858263573 | 0.275460514015143 | 3.8592526023694e-06 | 0.366953967688465 | 0.0154060925023275 | 0.197511324932359 |
| TCX | ADediting_522158 | chr16_19866517_- | 0.693721133092742 | -0.0324172037680996 | 0.000590467388709059 | -0.277340597034873 | 6.9423647816686e-12 | 0.522550075507378 |
| DLPFC | ADediting_522159 | chr16_19866525_- | 0.0483497543390095 | 0.112230537405924 | 0.814603853653046 | -0.0133716139672523 | 1.23149206430604e-10 | 0.354968871269648 |
| CER | ADediting_522159 | chr16_19866525_- | 0.000258687233005289 | 0.294141010024375 | 6.4475287586197e-05 | 0.320297714780741 | 0.000747530030567203 | 0.27233984139333 |
| TCX | ADediting_522159 | chr16_19866525_- | 0.869533569682942 | -0.0135235540986347 | 0.0019783451246198 | -0.250632876109967 | 3.16321674727823e-09 | 0.46005840842069 |
| CER | ADediting_522160 | chr16_19866605_- | 0.000129658171697669 | 0.307450683343489 | 3.22496689814832e-06 | 0.369692717122054 | 0.00282315787925872 | 0.242220193535845 |
| TCX | ADediting_522160 | chr16_19866605_- | 0.740593021480198 | 0.0272545742451021 | 0.00936971218400442 | -0.211510776073602 | 2.91490658908697e-07 | 0.404146577509772 |
| CER | ADediting_522161 | chr16_19866606_- | 0.000154035615813712 | 0.304190172695697 | 6.53291721243108e-07 | 0.393009491245056 | 2.62448285878352e-05 | 0.336017211272162 |
| TCX | ADediting_522161 | chr16_19866606_- | 0.239692786632621 | 0.0965833438459656 | 0.112651132125839 | -0.130065322273738 | 3.79360905587241e-06 | 0.367216736297937 |
| PG | ADediting_522161 | chr16_19866606_- | 0.530722133631887 | -0.0462540360515469 | 0.27663168438242 | -0.0801819753827778 | 1.98353900529265e-05 | 0.307319238808044 |
| CER | ADediting_522165 | chr16_19869149_- | 0.0216047394436828 | 0.187471428646252 | 9.90296518161415e-06 | 0.352151516089207 | 0.000129356954337636 | 0.307494442012827 |
| TCX | ADediting_522165 | chr16_19869149_- | 0.607452307558184 | 0.0422794560249529 | 0.0423915645679941 | -0.165957977625409 | 1.29945929041021e-06 | 0.383186717424416 |
| TCX | ADediting_522166 | chr16_19869207_- | 0.512590122971388 | 0.0538768621973408 | 0.285954115671003 | -0.0876889988429695 | 0.000145656389605449 | 0.305252917969641 |
| TCX | ADediting_522167 | chr16_19869246_- | 0.463274780657506 | 0.0603373349758083 | 0.258225132735879 | -0.0928901084642834 | 7.85121173706538e-05 | 0.316734314466458 |
| CER | ADediting_522170 | chr16_19869837_- | 9.96093514380753e-09 | 0.446806639035058 | 2.67717361467732e-10 | 0.486801789215355 | 7.47323768382452e-06 | 0.356651268665967 |
| STG | ADediting_522170 | chr16_19869837_- | 0.358857690414128 | -0.101372991205889 | 0.193225236241981 | -0.143374944111501 | 0.000896131502051276 | 0.35577581329728 |
| CER | ADediting_522171 | chr16_19869842_- | 1.33703121470027e-08 | 0.443312754792638 | 1.73874260623849e-10 | 0.49124822554935 | 0.000185534914335912 | 0.300625514323272 |
| CER | ADediting_522176 | chr16_19869953_- | 0.00236930959787577 | 0.246401501167186 | 1.02983916653261e-05 | 0.351520194271015 | 0.0177334992813157 | 0.193388916435819 |
| TCX | ADediting_522176 | chr16_19869953_- | 0.475521036967754 | 0.058699849895858 | 0.0874329385134026 | -0.140030209251416 | 3.50757947324806e-09 | 0.458887501348148 |
| TCX | ADediting_522177 | chr16_19869963_- | 0.339940955152747 | 0.0784529151467738 | 0.0586158876942962 | -0.154767700570023 | 3.21143233685251e-07 | 0.402830856985417 |
| CER | ADediting_522179 | chr16_19869989_- | 0.0128285622673194 | 0.202765639031428 | 8.94583043058418e-05 | 0.314348161634575 | 3.68577159896731e-07 | 0.400950097765143 |
| TCX | ADediting_522179 | chr16_19869989_- | 0.788683912462019 | 0.0220656672620812 | 0.00154744584636764 | -0.256285986175477 | 2.27637017916499e-10 | 0.488480089989864 |
| STG | ADediting_522179 | chr16_19869989_- | 0.703081030349483 | 0.0422022964808646 | 0.0817234088384267 | -0.191042860073617 | 0.00149711411312383 | 0.341105254342167 |
| CER | ADediting_522180 | chr16_19869992_- | 0.00542118750827976 | 0.226003023486972 | 4.03708503996134e-05 | 0.328592898080073 | 1.19076178005012e-05 | 0.349167213677423 |
| TCX | ADediting_522180 | chr16_19869992_- | 0.63729457784467 | -0.0388067013086628 | 0.000196618248723123 | -0.299504472291833 | 8.33278536012831e-09 | 0.448905977033263 |
| STG | ADediting_522180 | chr16_19869992_- | 0.540590120095215 | 0.0677038278082819 | 0.243039043947308 | -0.128774823175324 | 0.00347494788695686 | 0.315390716953831 |
| CER | ADediting_522181 | chr16_19869993_- | 0.0115426989519843 | 0.205742601647625 | 0.000120357519812947 | 0.308847712766658 | 2.1666028141809e-07 | 0.408140964743992 |
| TCX | ADediting_522181 | chr16_19869993_- | 0.868513851834096 | -0.0136302105746972 | 0.0192166080265233 | -0.191000917870439 | 0.000131336786590288 | 0.307208549286517 |
| CER | ADediting_522182 | chr16_19870013_- | 0.00951995244855082 | 0.211075852918608 | 0.000185124982230489 | 0.300668161617948 | 0.00255938503077759 | 0.244568979149095 |
| CER | ADediting_522183 | chr16_19870023_- | 5.98974630745837e-06 | 0.360140916685615 | 9.83480202749786e-08 | 0.418528320905317 | 0.000217512488911197 | 0.297542261220275 |
| TCX | ADediting_522183 | chr16_19870023_- | 0.0181188154229422 | 0.192752337461199 | 0.201090114527302 | -0.104974665117595 | 1.74972302701957e-08 | 0.440085092361332 |
| PG | ADediting_522183 | chr16_19870023_- | 0.151987487120505 | -0.105457197256357 | 0.0920122357279467 | -0.123899968298456 | 4.61304000716602e-07 | 0.359657645936121 |
| CER | ADediting_522186 | chr16_19870044_- | 1.73621540219112e-05 | 0.342966046801503 | 8.00380933182461e-07 | 0.3901418664112 | 3.99590409606824e-05 | 0.328771902886462 |
| TCX | ADediting_522186 | chr16_19870044_- | 0.672002362037991 | 0.0348516304041362 | 0.00859233564561388 | -0.213864724209057 | 1.23980756612778e-08 | 0.444212582848339 |
| STG | ADediting_522186 | chr16_19870044_- | 0.0590804293979919 | -0.206819648800863 | 0.00402469712233957 | -0.310671283859439 | 0.000104178293247686 | 0.410723832386878 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.68534191809349e-06 | 0.259408682974486 | 0.0225671982347633 | 0.129511294063657 | 2.93869055017264e-19 | 0.479859716460461 |
| AC | 1.53817879579211e-31 | 0.651100909235994 | 5.49484270391671e-16 | 0.48255103883302 | 5.94620533318374e-47 | 0.752868512955493 |
| PCC | 0.0459174075866986 | 0.144625564727249 | 0.372495312740641 | 0.064886937625298 | 3.06133570802556e-13 | 0.495740058339437 |
| CER | 0.000165034329859318 | 0.302874129605689 | 0.000107004947133426 | 0.311040642065297 | 3.78537599020189e-25 | 0.718929922744837 |
| TCX | 0.00385328633320017 | 0.234621599809282 | 0.000378157186813397 | -0.286540846792749 | 9.44787210984428e-43 | 0.848531469995132 |
| FP | 0.00186105189641483 | 0.231671755867835 | 0.591409435099338 | 0.0405033040076715 | 6.35931332449454e-33 | 0.746199329508137 |
| IFG | 0.0126932206031515 | 0.490993905925138 | 0.04777664415064 | 0.399656725705965 | 1.16945371979616e-06 | 0.805789583129379 |
| PG | 8.96461146838993e-16 | 0.54489028606128 | 0.00107960326486174 | 0.237842927993879 | 2.50048340521945e-14 | 0.520909841825389 |
| STG | 0.0226057482330061 | 0.248578067796463 | 0.726304248364011 | -0.0387595502802125 | 1.51648540001904e-17 | 0.768085725862682 |
Top |
Relation with AD stages for GPRC5B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_522108 | chr16_19863622_- | 0.0014908476072589 | 0.301999215346906 |
| CER | ADediting_522134 | chr16_19865043_- | 0.000482745338688054 | 0.33021064439671 |
| CER | ADediting_522140 | chr16_19865156_- | 1.29663326593843e-05 | 0.40610217249079 |
| CER | ADediting_522147 | chr16_19866065_- | 0.000359136204302784 | 0.33718267595897 |
| CER | ADediting_522151 | chr16_19866435_- | 1.52768791220327e-05 | 0.403038124916353 |
| CER | ADediting_522152 | chr16_19866442_- | 0.000168328605377062 | 0.354335303879827 |
| CER | ADediting_522157 | chr16_19866499_- | 0.000153224734476551 | 0.356396714938452 |
| CER | ADediting_522161 | chr16_19866606_- | 6.86733067861444e-05 | 0.37344721998056 |
| CER | ADediting_522170 | chr16_19869837_- | 6.1968421229996e-05 | 0.375562756634369 |
| CER | ADediting_522176 | chr16_19869953_- | 2.00170622504166e-05 | 0.397921870801336 |
| CER | ADediting_522177 | chr16_19869963_- | 0.000205398545455247 | 0.349924095232745 |
| CER | ADediting_522181 | chr16_19869993_- | 0.00129703124580311 | 0.305635763991512 |
| CER | ADediting_522183 | chr16_19870023_- | 7.49134568434234e-05 | 0.371644786931827 |
| TCX | ADediting_522108 | chr16_19863622_- | 0.000365383952686081 | 0.339824907006707 |
| TCX | ADediting_522129 | chr16_19864980_- | 0.000164957341960721 | 0.357963666192037 |
| TCX | ADediting_522140 | chr16_19865156_- | 3.03867031319478e-06 | 0.435712607327996 |
| TCX | ADediting_522146 | chr16_19866064_- | 0.00151150550579321 | 0.304399449940633 |
| TCX | ADediting_522147 | chr16_19866065_- | 2.50324595591669e-05 | 0.397094754772787 |
| TCX | ADediting_522151 | chr16_19866435_- | 8.31565574433444e-05 | 0.372761586756597 |
| TCX | ADediting_522161 | chr16_19866606_- | 0.00139533844197711 | 0.30651307296145 |
| TCX | ADediting_522165 | chr16_19869149_- | 0.00074484417275487 | 0.322589592249516 |
| TCX | ADediting_522170 | chr16_19869837_- | 0.000364595683015748 | 0.339875679413835 |
| TCX | ADediting_522171 | chr16_19869842_- | 0.000136536436076717 | 0.362121145241915 |
| IFG | ADediting_522092 | chr16_19862785_- | 0.0423795586445896 | 0.40894316526528 |
| IFG | ADediting_522093 | chr16_19862793_- | 0.0107675278853448 | 0.500844465953116 |
| IFG | ADediting_522096 | chr16_19862834_- | 0.0112614191895443 | 0.498187153213234 |
| IFG | ADediting_522097 | chr16_19862849_- | 0.0354713369979928 | 0.422303326441651 |
| IFG | ADediting_522098 | chr16_19862854_- | 0.0423795586445896 | 0.40894316526528 |
| IFG | ADediting_522117 | chr16_19863680_- | 0.0128042285790796 | 0.490464705575392 |
| IFG | ADediting_522170 | chr16_19869837_- | 0.00279730727115097 | 0.572262824436764 |
| IFG | ADediting_522179 | chr16_19869989_- | 0.0112614191895443 | 0.498187153213234 |
| IFG | ADediting_522180 | chr16_19869992_- | 0.0115670199471666 | 0.49659085785987 |
| IFG | ADediting_522186 | chr16_19870044_- | 0.0368849354318156 | 0.419411309611391 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 4.39048420387572e-06 | 0.425615352035079 |
| TCX | 2.29425513982237e-08 | 0.510319036615428 |
| PG | 1.50059409883289e-09 | 0.424874532549264 |
Top |
RelatedDrugs for GPRC5B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for GPRC5B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|