ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for VPS36

Gene summary

Gene information	Gene symbol	VPS36
	Gene ID	51028
	Gene name	vacuolar protein sorting 36 homolog
	Synonyms	C13orf9\|CGI-145\|EAP45
	Cytomap	13q14.3
	Type of gene	protein-coding
	Description	vacuolar protein-sorting-associated protein 36ELL-associated protein of 45 kDaESCRT-II complex subunit VPS36
	Modification date	20200313
	UniProtAcc	Q86VN1,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for VPS36

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_402853(52417387, -), ADediting_402854(52417407, -), ADediting_402855(52417423, -), ADediting_402856(52417426, -), ADediting_402857(52417428, -), ADediting_402858(52417429, -), ADediting_402859(52417433, -), ADediting_402860(52417457, -), ADediting_402861(52417466, -), ADediting_402862(52417472, -), ADediting_402863(52417498, -), ADediting_402864(52417499, -), ADediting_402865(52417521, -), ADediting_402866(52417525, -), ADediting_402867(52417528, -), ADediting_402868(52417530, -), ADediting_402869(52417538, -), ADediting_402870(52417539, -), ADediting_402871(52417553, -), ADediting_402872(52417554, -), ADediting_402873(52417563, -), ADediting_402874(52417567, -), ADediting_402875(52417572, -), ADediting_402876(52417573, -), ADediting_402877(52417584, -), ADediting_402878(52417602, -), ADediting_402879(52417627, -), ADediting_402880(52417632, -), ADediting_402881(52417633, -), ADediting_402882(52417639, -), ADediting_402883(52417641, -), ADediting_402884(52418320, -), ADediting_402885(52418326, -), ADediting_402886(52418332, -), ADediting_402887(52418383, -), ADediting_402888(52418395, -), ADediting_402889(52418409, -), ADediting_402890(52418412, -), ADediting_402891(52418420, -), ADediting_402892(52418453, -), ADediting_402893(52418463, -), ADediting_402894(52418488, -), ADediting_402895(52418489, -), ADediting_402896(52418492, -), ADediting_402897(52418493, -), ADediting_402898(52418512, -), ADediting_402899(52418518, -), ADediting_402900(52418519, -), ADediting_402901(52418528, -), ADediting_402902(52418540, -), ADediting_402903(52418543, -), ADediting_402904(52418555, -), ADediting_402905(52419799, -), ADediting_402906(52419808, -), ADediting_402907(52419811, -), ADediting_402908(52419829, -), ADediting_402909(52419830, -), ADediting_402910(52419839, -), ADediting_402911(52419868, -), ADediting_402912(52419875, -), ADediting_402913(52419922, -), ADediting_402914(52419931, -), ADediting_402915(52419978, -), ADediting_402916(52419984, -), ADediting_402917(52419996, -), ADediting_402918(52419997, -), ADediting_402919(52420015, -), ADediting_402920(52420049, -), ADediting_402921(52420075, -), ADediting_402922(52420078, -), ADediting_402923(52420084, -), ADediting_402924(52420092, -), ADediting_402925(52420093, -), ADediting_402926(52420112, -), ADediting_402927(52420117, -), ADediting_402928(52420119, -), ADediting_402929(52420129, -), ADediting_402930(52420130, -), ADediting_402931(52420133, -), ADediting_402932(52420156, -), ADediting_402933(52420159, -), ADediting_402934(52420160, -), ADediting_402935(52420198, -), ADediting_402936(52420229, -), ADediting_402937(52420230, -), ADediting_402938(52420395, -), ADediting_402939(52420398, -), ADediting_402940(52420430, -), ADediting_402941(52420431, -), ADediting_402942(52420461, -), ADediting_402943(52420465, -), ADediting_402944(52420471, -), ADediting_402945(52420497, -), ADediting_402946(52420506, -), ADediting_402947(52420508, -), ADediting_402948(52420509, -), ADediting_402949(52420510, -), ADediting_402950(52420511, -), ADediting_402951(52420512, -), ADediting_402952(52420515, -), ADediting_402953(52420521, -), ADediting_402954(52420526, -), ADediting_402955(52420536, -), ADediting_402956(52420537, -), ADediting_402957(52420549, -), ADediting_402958(52420557, -), ADediting_402959(52420564, -), ADediting_402960(52420565, -), ADediting_402961(52420575, -), ADediting_402962(52420579, -), ADediting_402963(52420605, -), ADediting_402964(52420606, -), ADediting_402965(52420668, -), ADediting_402966(52420669, -), ADediting_402967(52420674, -), ADediting_402968(52420676, -), ADediting_402969(52420680, -), ADediting_402970(52420696, -), ADediting_402971(52420709, -), ADediting_402972(52420729, -), ADediting_402973(52420732, -), ADediting_402974(52420740, -), ADediting_402975(52420747, -), ADediting_402976(52420750, -), ADediting_402977(52420755, -), ADediting_402978(52420758, -), ADediting_402979(52420803, -), ADediting_402980(52420844, -), ADediting_402981(52420854, -), ADediting_402982(52420860, -), ADediting_402983(52420891, -), ADediting_402984(52420895, -), ADediting_402985(52420904, -), ADediting_402986(52420905, -), ADediting_402987(52420916, -), ADediting_402988(52420927, -), ADediting_402989(52420928, -), ADediting_402990(52420929, -), ADediting_402991(52420955, -), ADediting_402992(52420958, -), ADediting_402993(52420981, -), ADediting_402994(52420999, -), ADediting_402995(52421009, -), ADediting_402996(52421012, -), ADediting_402997(52421013, -), ADediting_402998(52421021, -), ADediting_402999(52421034, -), ADediting_403000(52421035, -), ADediting_403001(52421038, -), ADediting_403002(52421039, -), ADediting_403003(52421058, -), ADediting_403004(52421059, -), ADediting_403005(52421064, -), ADediting_403006(52421074, -), ADediting_403007(52421077, -), ADediting_403008(52421083, -), ADediting_403009(52421105, -), ADediting_403010(52421247, -), ADediting_403011(52421248, -), ADediting_403012(52421268, -), ADediting_403013(52421292, -), ADediting_403014(52421319, -), ADediting_403015(52421320, -), ADediting_403016(52421564, -), ADediting_403017(52421594, -), ADediting_403018(52421598, -), ADediting_403019(52421611, -), ADediting_403020(52421615, -), ADediting_403021(52421619, -), ADediting_403022(52421620, -), ADediting_403023(52421627, -), ADediting_403024(52421633, -), ADediting_403025(52421637, -), ADediting_403026(52421646, -), ADediting_403027(52421650, -), ADediting_403028(52421659, -), ADediting_403029(52421660, -), ADediting_403030(52421702, -), ADediting_403031(52421703, -), ADediting_403032(52421717, -), ADediting_403033(52421719, -), ADediting_403034(52421727, -), ADediting_403035(52421728, -), ADediting_403036(52421737, -), ADediting_403037(52421740, -), ADediting_403038(52421748, -), ADediting_403039(52421751, -), ADediting_403040(52421756, -), ADediting_403041(52421763, -), ADediting_403042(52421766, -), ADediting_403043(52421791, -), ADediting_403044(52421796, -), ADediting_403045(52421797, -), ADediting_403046(52421803, -), ADediting_403047(52421810, -), ADediting_403048(52421842, -), ADediting_403049(52421853, -), ADediting_403050(52421860, -), ADediting_403051(52421861, -), ADediting_403052(52421862, -), ADediting_403053(52421927, -), ADediting_403054(52421944, -), ADediting_403055(52421957, -), ADediting_403056(52421966, -), ADediting_403057(52421970, -), ADediting_403058(52421972, -), ADediting_403059(52421983, -), ADediting_403060(52421995, -), ADediting_403061(52421998, -), ADediting_403062(52422002, -), ADediting_403063(52422005, -), ADediting_403064(52422006, -), ADediting_403065(52422014, -), ADediting_403066(52422087, -), ADediting_403067(52422090, -), ADediting_403068(52422100, -), ADediting_403069(52422106, -), ADediting_403070(52422120, -), ADediting_403071(52422129, -), ADediting_403072(52422139, -), ADediting_403073(52422141, -), ADediting_403074(52422148, -), ADediting_403075(52422155, -), ADediting_403076(52422157, -), ADediting_403077(52422160, -), ADediting_403078(52422162, -), ADediting_403079(52422175, -), ADediting_403080(52422176, -), ADediting_403081(52422180, -), ADediting_403082(52422181, -), ADediting_403083(52422182, -), ADediting_403084(52422183, -), ADediting_403085(52422184, -), ADediting_403086(52422185, -), ADediting_403087(52422213, -), ADediting_403088(52422215, -), ADediting_403089(52422216, -), ADediting_403090(52422217, -), ADediting_403091(52422221, -), ADediting_403092(52422222, -), ADediting_403093(52422223, -), ADediting_403094(52422225, -), ADediting_403095(52422229, -), ADediting_403096(52422231, -), ADediting_403097(52422235, -), ADediting_403098(52422236, -), ADediting_403099(52422239, -), ADediting_403100(52422240, -), ADediting_403101(52422244, -), ADediting_403102(52422245, -), ADediting_403103(52422250, -), ADediting_403104(52422257, -), ADediting_403105(52422273, -), ADediting_403106(52422291, -), ADediting_403107(52422298, -), ADediting_403108(52422302, -), ADediting_403109(52422346, -), ADediting_403110(52423267, -), ADediting_403111(52423272, -), ADediting_403112(52423910, -), ADediting_403113(52423925, -), ADediting_403114(52423930, -), ADediting_403115(52423934, -), ADediting_403116(52423954, -), ADediting_403117(52423963, -), ADediting_403118(52423969, -), ADediting_403119(52423973, -), ADediting_403120(52423986, -), ADediting_403121(52423990, -), ADediting_403122(52423996, -), ADediting_403123(52424022, -), ADediting_403124(52424025, -), ADediting_403125(52424028, -), ADediting_403126(52424030, -), ADediting_403127(52424033, -), ADediting_403128(52424035, -), ADediting_403129(52424036, -), ADediting_403130(52424037, -), ADediting_403131(52424038, -), ADediting_403132(52424039, -), ADediting_403133(52424042, -), ADediting_403134(52424053, -), ADediting_403135(52424067, -), ADediting_403136(52424068, -), ADediting_403137(52424073, -), ADediting_403138(52424084, -), ADediting_403139(52424087, -), ADediting_403140(52424092, -), ADediting_403141(52424102, -), ADediting_403142(52424105, -), ADediting_403143(52424132, -), ADediting_403144(52424133, -), ADediting_403145(52424141, -), ADediting_403146(52424149, -), ADediting_403147(52424729, -), ADediting_403148(52424741, -), ADediting_403149(52424769, -), ADediting_403150(52424789, -), ADediting_403151(52424794, -), ADediting_403152(52424814, -), ADediting_403153(52424818, -), ADediting_403154(52424819, -), ADediting_403155(52424820, -), ADediting_403156(52424823, -), ADediting_403157(52424829, -), ADediting_403158(52424864, -), ADediting_403159(52424866, -), ADediting_403160(52424876, -), ADediting_403161(52424888, -), ADediting_403162(52424905, -), ADediting_403163(52424925, -), ADediting_403164(52424931, -), ADediting_403165(52424936, -), ADediting_403166(52424941, -), ADediting_403167(52425056, -), ADediting_403168(52425084, -), ADediting_403169(52425090, -), ADediting_403170(52425099, -), ADediting_403171(52425100, -), ADediting_403172(52425131, -), ADediting_403173(52425141, -), ADediting_403174(52425177, -), ADediting_403175(52425190, -), ADediting_403176(52425201, -), ADediting_403177(52425206, -), ADediting_403178(52425227, -), ADediting_403179(52432090, -), ADediting_403180(52432147, -), ADediting_403181(52434483, -), ADediting_403182(52434552, -), ADediting_403183(52435034, -), ADediting_403184(52435246, -), ADediting_403185(52435250, -), ADediting_403186(52446941, -), ADediting_403187(52446943, -), ADediting_403188(52446948, -), ADediting_403189(52446961, -), ADediting_403190(52446987, -), ADediting_403191(52447172, -), ADediting_403192(52449159, -), ADediting_403193(52449178, -), ADediting_403194(52449256, -), ADediting_403195(52449263, -), ADediting_403196(52449301, -), ADediting_1535758(52417493, -), ADediting_1535759(52418342, -), ADediting_1535760(52418351, -), ADediting_1535761(52418466, -), ADediting_1535762(52421097, -), ADediting_1535763(52421982, -), ADediting_1535764(52422007, -), ADediting_1535765(52422158, -), ADediting_1535766(52422166, -), ADediting_1535767(52422227, -), ADediting_1535768(52424063, -), ADediting_1535769(52431680, -), ADediting_1535770(52432187, -), ADediting_1617181(52417529, -), ADediting_1617182(52418548, -), ADediting_1617183(52420500, -), ADediting_1617184(52420597, -), ADediting_1617185(52424026, -), ADediting_1617186(52424110, -), ADediting_1617187(52440099, -), ADediting_1617188(52449232, -),

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RNA editing positional annotations for VPS36 using Annovar

Protein coding RNA editing(s).

ADeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
ADediting_402879	chr13_52417627_-	nonsynonymous SNV	ENST00000650274.1	c.A958G	p.S320G	.	.	.
ADediting_402880	chr13_52417632_-	nonsynonymous SNV	ENST00000650274.1	c.A953G	p.N318S	.	.	.
ADediting_402881	chr13_52417633_-	nonsynonymous SNV	ENST00000650274.1	c.A952G	p.N318D	.	.	.
ADediting_402882	chr13_52417639_-	nonsynonymous SNV	ENST00000650274.1	c.A946G	p.T316A	.	.	.
ADediting_402883	chr13_52417641_-	nonsynonymous SNV	ENST00000650274.1	c.A944G	p.H315R	.	.	.

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_402853	chr13_52417387_-	intronic
ADediting_402854	chr13_52417407_-	intronic
ADediting_402855	chr13_52417423_-	intronic
ADediting_402856	chr13_52417426_-	intronic
ADediting_402857	chr13_52417428_-	intronic
ADediting_402858	chr13_52417429_-	intronic
ADediting_402859	chr13_52417433_-	intronic
ADediting_402860	chr13_52417457_-	UTR3
ADediting_402861	chr13_52417466_-	UTR3
ADediting_402862	chr13_52417472_-	UTR3
ADediting_402863	chr13_52417498_-	UTR3
ADediting_402864	chr13_52417499_-	UTR3
ADediting_402865	chr13_52417521_-	UTR3
ADediting_402866	chr13_52417525_-	UTR3
ADediting_402867	chr13_52417528_-	UTR3
ADediting_402868	chr13_52417530_-	UTR3
ADediting_402869	chr13_52417538_-	UTR3
ADediting_402870	chr13_52417539_-	UTR3
ADediting_402871	chr13_52417553_-	UTR3
ADediting_402872	chr13_52417554_-	UTR3
ADediting_402873	chr13_52417563_-	UTR3
ADediting_402874	chr13_52417567_-	UTR3
ADediting_402875	chr13_52417572_-	UTR3
ADediting_402876	chr13_52417573_-	UTR3
ADediting_402877	chr13_52417584_-	UTR3
ADediting_402878	chr13_52417602_-	UTR3
ADediting_402879	chr13_52417627_-	exonic
ADediting_402880	chr13_52417632_-	exonic
ADediting_402881	chr13_52417633_-	exonic
ADediting_402882	chr13_52417639_-	exonic
ADediting_402883	chr13_52417641_-	exonic
ADediting_402884	chr13_52418320_-	intronic
ADediting_402885	chr13_52418326_-	intronic
ADediting_402886	chr13_52418332_-	intronic
ADediting_402887	chr13_52418383_-	intronic
ADediting_402888	chr13_52418395_-	intronic
ADediting_402889	chr13_52418409_-	intronic
ADediting_402890	chr13_52418412_-	intronic
ADediting_402891	chr13_52418420_-	intronic
ADediting_402892	chr13_52418453_-	intronic
ADediting_402893	chr13_52418463_-	intronic
ADediting_402894	chr13_52418488_-	intronic
ADediting_402895	chr13_52418489_-	intronic
ADediting_402896	chr13_52418492_-	intronic
ADediting_402897	chr13_52418493_-	intronic
ADediting_402898	chr13_52418512_-	intronic
ADediting_402899	chr13_52418518_-	intronic
ADediting_402900	chr13_52418519_-	intronic
ADediting_402901	chr13_52418528_-	intronic
ADediting_402902	chr13_52418540_-	intronic
ADediting_402903	chr13_52418543_-	intronic
ADediting_402904	chr13_52418555_-	intronic
ADediting_402905	chr13_52419799_-	intronic
ADediting_402906	chr13_52419808_-	intronic
ADediting_402907	chr13_52419811_-	intronic
ADediting_402908	chr13_52419829_-	intronic
ADediting_402909	chr13_52419830_-	intronic
ADediting_402910	chr13_52419839_-	intronic
ADediting_402911	chr13_52419868_-	intronic
ADediting_402912	chr13_52419875_-	intronic
ADediting_402913	chr13_52419922_-	intronic
ADediting_402914	chr13_52419931_-	intronic
ADediting_402915	chr13_52419978_-	intronic
ADediting_402916	chr13_52419984_-	intronic
ADediting_402917	chr13_52419996_-	intronic
ADediting_402918	chr13_52419997_-	intronic
ADediting_402919	chr13_52420015_-	intronic
ADediting_402920	chr13_52420049_-	intronic
ADediting_402921	chr13_52420075_-	intronic
ADediting_402922	chr13_52420078_-	intronic
ADediting_402923	chr13_52420084_-	intronic
ADediting_402924	chr13_52420092_-	intronic
ADediting_402925	chr13_52420093_-	intronic
ADediting_402926	chr13_52420112_-	intronic
ADediting_402927	chr13_52420117_-	intronic
ADediting_402928	chr13_52420119_-	intronic
ADediting_402929	chr13_52420129_-	intronic
ADediting_402930	chr13_52420130_-	intronic
ADediting_402931	chr13_52420133_-	intronic
ADediting_402932	chr13_52420156_-	intronic
ADediting_402933	chr13_52420159_-	intronic
ADediting_402934	chr13_52420160_-	intronic
ADediting_402935	chr13_52420198_-	intronic
ADediting_402936	chr13_52420229_-	intronic
ADediting_402937	chr13_52420230_-	intronic
ADediting_402938	chr13_52420395_-	intronic
ADediting_402939	chr13_52420398_-	intronic
ADediting_402940	chr13_52420430_-	intronic
ADediting_402941	chr13_52420431_-	intronic
ADediting_402942	chr13_52420461_-	intronic
ADediting_402943	chr13_52420465_-	intronic
ADediting_402944	chr13_52420471_-	intronic
ADediting_402945	chr13_52420497_-	intronic
ADediting_402946	chr13_52420506_-	intronic
ADediting_402947	chr13_52420508_-	intronic
ADediting_402948	chr13_52420509_-	intronic
ADediting_402949	chr13_52420510_-	intronic
ADediting_402950	chr13_52420511_-	intronic
ADediting_402951	chr13_52420512_-	intronic
ADediting_402952	chr13_52420515_-	intronic
ADediting_402953	chr13_52420521_-	intronic
ADediting_402954	chr13_52420526_-	intronic
ADediting_402955	chr13_52420536_-	intronic
ADediting_402956	chr13_52420537_-	intronic
ADediting_402957	chr13_52420549_-	intronic
ADediting_402958	chr13_52420557_-	intronic
ADediting_402959	chr13_52420564_-	intronic
ADediting_402960	chr13_52420565_-	intronic
ADediting_402961	chr13_52420575_-	intronic
ADediting_402962	chr13_52420579_-	intronic
ADediting_402963	chr13_52420605_-	intronic
ADediting_402964	chr13_52420606_-	intronic
ADediting_402965	chr13_52420668_-	intronic
ADediting_402966	chr13_52420669_-	intronic
ADediting_402967	chr13_52420674_-	intronic
ADediting_402968	chr13_52420676_-	intronic
ADediting_402969	chr13_52420680_-	intronic
ADediting_402970	chr13_52420696_-	intronic
ADediting_402971	chr13_52420709_-	intronic
ADediting_402972	chr13_52420729_-	intronic
ADediting_402973	chr13_52420732_-	intronic
ADediting_402974	chr13_52420740_-	intronic
ADediting_402975	chr13_52420747_-	intronic
ADediting_402976	chr13_52420750_-	intronic
ADediting_402977	chr13_52420755_-	intronic
ADediting_402978	chr13_52420758_-	intronic
ADediting_402979	chr13_52420803_-	intronic
ADediting_402980	chr13_52420844_-	intronic
ADediting_402981	chr13_52420854_-	intronic
ADediting_402982	chr13_52420860_-	intronic
ADediting_402983	chr13_52420891_-	intronic
ADediting_402984	chr13_52420895_-	intronic
ADediting_402985	chr13_52420904_-	intronic
ADediting_402986	chr13_52420905_-	intronic
ADediting_402987	chr13_52420916_-	intronic
ADediting_402988	chr13_52420927_-	intronic
ADediting_402989	chr13_52420928_-	intronic
ADediting_402990	chr13_52420929_-	intronic
ADediting_402991	chr13_52420955_-	intronic
ADediting_402992	chr13_52420958_-	intronic
ADediting_402993	chr13_52420981_-	intronic
ADediting_402994	chr13_52420999_-	intronic
ADediting_402995	chr13_52421009_-	intronic
ADediting_402996	chr13_52421012_-	intronic
ADediting_402997	chr13_52421013_-	intronic
ADediting_402998	chr13_52421021_-	intronic
ADediting_402999	chr13_52421034_-	intronic
ADediting_403000	chr13_52421035_-	intronic
ADediting_403001	chr13_52421038_-	intronic
ADediting_403002	chr13_52421039_-	intronic
ADediting_403003	chr13_52421058_-	intronic
ADediting_403004	chr13_52421059_-	intronic
ADediting_403005	chr13_52421064_-	intronic
ADediting_403006	chr13_52421074_-	intronic
ADediting_403007	chr13_52421077_-	intronic
ADediting_403008	chr13_52421083_-	intronic
ADediting_403009	chr13_52421105_-	intronic
ADediting_403010	chr13_52421247_-	intronic
ADediting_403011	chr13_52421248_-	intronic
ADediting_403012	chr13_52421268_-	intronic
ADediting_403013	chr13_52421292_-	intronic
ADediting_403014	chr13_52421319_-	intronic
ADediting_403015	chr13_52421320_-	intronic
ADediting_403016	chr13_52421564_-	intronic
ADediting_403017	chr13_52421594_-	intronic
ADediting_403018	chr13_52421598_-	intronic
ADediting_403019	chr13_52421611_-	intronic
ADediting_403020	chr13_52421615_-	intronic
ADediting_403021	chr13_52421619_-	intronic
ADediting_403022	chr13_52421620_-	intronic
ADediting_403023	chr13_52421627_-	intronic
ADediting_403024	chr13_52421633_-	intronic
ADediting_403025	chr13_52421637_-	intronic
ADediting_403026	chr13_52421646_-	intronic
ADediting_403027	chr13_52421650_-	intronic
ADediting_403028	chr13_52421659_-	intronic
ADediting_403029	chr13_52421660_-	intronic
ADediting_403030	chr13_52421702_-	intronic
ADediting_403031	chr13_52421703_-	intronic
ADediting_403032	chr13_52421717_-	intronic
ADediting_403033	chr13_52421719_-	intronic
ADediting_403034	chr13_52421727_-	intronic
ADediting_403035	chr13_52421728_-	intronic
ADediting_403036	chr13_52421737_-	intronic
ADediting_403037	chr13_52421740_-	intronic
ADediting_403038	chr13_52421748_-	intronic
ADediting_403039	chr13_52421751_-	intronic
ADediting_403040	chr13_52421756_-	intronic
ADediting_403041	chr13_52421763_-	intronic
ADediting_403042	chr13_52421766_-	intronic
ADediting_403043	chr13_52421791_-	intronic
ADediting_403044	chr13_52421796_-	intronic
ADediting_403045	chr13_52421797_-	intronic
ADediting_403046	chr13_52421803_-	intronic
ADediting_403047	chr13_52421810_-	intronic
ADediting_403048	chr13_52421842_-	intronic
ADediting_403049	chr13_52421853_-	intronic
ADediting_403050	chr13_52421860_-	intronic
ADediting_403051	chr13_52421861_-	intronic
ADediting_403052	chr13_52421862_-	intronic
ADediting_403053	chr13_52421927_-	intronic
ADediting_403054	chr13_52421944_-	intronic
ADediting_403055	chr13_52421957_-	intronic
ADediting_403056	chr13_52421966_-	intronic
ADediting_403057	chr13_52421970_-	intronic
ADediting_403058	chr13_52421972_-	intronic
ADediting_403059	chr13_52421983_-	intronic
ADediting_403060	chr13_52421995_-	intronic
ADediting_403061	chr13_52421998_-	intronic
ADediting_403062	chr13_52422002_-	intronic
ADediting_403063	chr13_52422005_-	intronic
ADediting_403064	chr13_52422006_-	intronic
ADediting_403065	chr13_52422014_-	intronic
ADediting_403066	chr13_52422087_-	intronic
ADediting_403067	chr13_52422090_-	intronic
ADediting_403068	chr13_52422100_-	intronic
ADediting_403069	chr13_52422106_-	intronic
ADediting_403070	chr13_52422120_-	intronic
ADediting_403071	chr13_52422129_-	intronic
ADediting_403072	chr13_52422139_-	intronic
ADediting_403073	chr13_52422141_-	intronic
ADediting_403074	chr13_52422148_-	intronic
ADediting_403075	chr13_52422155_-	intronic
ADediting_403076	chr13_52422157_-	intronic
ADediting_403077	chr13_52422160_-	intronic
ADediting_403078	chr13_52422162_-	intronic
ADediting_403079	chr13_52422175_-	intronic
ADediting_403080	chr13_52422176_-	intronic
ADediting_403081	chr13_52422180_-	intronic
ADediting_403082	chr13_52422181_-	intronic
ADediting_403083	chr13_52422182_-	intronic
ADediting_403084	chr13_52422183_-	intronic
ADediting_403085	chr13_52422184_-	intronic
ADediting_403086	chr13_52422185_-	intronic
ADediting_403087	chr13_52422213_-	intronic
ADediting_403088	chr13_52422215_-	intronic
ADediting_403089	chr13_52422216_-	intronic
ADediting_403090	chr13_52422217_-	intronic
ADediting_403091	chr13_52422221_-	intronic
ADediting_403092	chr13_52422222_-	intronic
ADediting_403093	chr13_52422223_-	intronic
ADediting_403094	chr13_52422225_-	intronic
ADediting_403095	chr13_52422229_-	intronic
ADediting_403096	chr13_52422231_-	intronic
ADediting_403097	chr13_52422235_-	intronic
ADediting_403098	chr13_52422236_-	intronic
ADediting_403099	chr13_52422239_-	intronic
ADediting_403100	chr13_52422240_-	intronic
ADediting_403101	chr13_52422244_-	intronic
ADediting_403102	chr13_52422245_-	intronic
ADediting_403103	chr13_52422250_-	intronic
ADediting_403104	chr13_52422257_-	intronic
ADediting_403105	chr13_52422273_-	intronic
ADediting_403106	chr13_52422291_-	intronic
ADediting_403107	chr13_52422298_-	intronic
ADediting_403108	chr13_52422302_-	intronic
ADediting_403109	chr13_52422346_-	intronic
ADediting_403110	chr13_52423267_-	intronic
ADediting_403111	chr13_52423272_-	intronic
ADediting_403112	chr13_52423910_-	intronic
ADediting_403113	chr13_52423925_-	intronic
ADediting_403114	chr13_52423930_-	intronic
ADediting_403115	chr13_52423934_-	intronic
ADediting_403116	chr13_52423954_-	intronic
ADediting_403117	chr13_52423963_-	intronic
ADediting_403118	chr13_52423969_-	intronic
ADediting_403119	chr13_52423973_-	intronic
ADediting_403120	chr13_52423986_-	intronic
ADediting_403121	chr13_52423990_-	intronic
ADediting_403122	chr13_52423996_-	intronic
ADediting_403123	chr13_52424022_-	intronic
ADediting_403124	chr13_52424025_-	intronic
ADediting_403125	chr13_52424028_-	intronic
ADediting_403126	chr13_52424030_-	intronic
ADediting_403127	chr13_52424033_-	intronic
ADediting_403128	chr13_52424035_-	intronic
ADediting_403129	chr13_52424036_-	intronic
ADediting_403130	chr13_52424037_-	intronic
ADediting_403131	chr13_52424038_-	intronic
ADediting_403132	chr13_52424039_-	intronic
ADediting_403133	chr13_52424042_-	intronic
ADediting_403134	chr13_52424053_-	intronic
ADediting_403135	chr13_52424067_-	intronic
ADediting_403136	chr13_52424068_-	intronic
ADediting_403137	chr13_52424073_-	intronic
ADediting_403138	chr13_52424084_-	intronic
ADediting_403139	chr13_52424087_-	intronic
ADediting_403140	chr13_52424092_-	intronic
ADediting_403141	chr13_52424102_-	intronic
ADediting_403142	chr13_52424105_-	intronic
ADediting_403143	chr13_52424132_-	intronic
ADediting_403144	chr13_52424133_-	intronic
ADediting_403145	chr13_52424141_-	intronic
ADediting_403146	chr13_52424149_-	intronic
ADediting_403147	chr13_52424729_-	intronic
ADediting_403148	chr13_52424741_-	intronic
ADediting_403149	chr13_52424769_-	intronic
ADediting_403150	chr13_52424789_-	intronic
ADediting_403151	chr13_52424794_-	intronic
ADediting_403152	chr13_52424814_-	intronic
ADediting_403153	chr13_52424818_-	intronic
ADediting_403154	chr13_52424819_-	intronic
ADediting_403155	chr13_52424820_-	intronic
ADediting_403156	chr13_52424823_-	intronic
ADediting_403157	chr13_52424829_-	intronic
ADediting_403158	chr13_52424864_-	intronic
ADediting_403159	chr13_52424866_-	intronic
ADediting_403160	chr13_52424876_-	intronic
ADediting_403161	chr13_52424888_-	intronic
ADediting_403162	chr13_52424905_-	intronic
ADediting_403163	chr13_52424925_-	intronic
ADediting_403164	chr13_52424931_-	intronic
ADediting_403165	chr13_52424936_-	intronic
ADediting_403166	chr13_52424941_-	intronic
ADediting_403167	chr13_52425056_-	intronic
ADediting_403168	chr13_52425084_-	intronic
ADediting_403169	chr13_52425090_-	intronic
ADediting_403170	chr13_52425099_-	intronic
ADediting_403171	chr13_52425100_-	intronic
ADediting_403172	chr13_52425131_-	intronic
ADediting_403173	chr13_52425141_-	intronic
ADediting_403174	chr13_52425177_-	intronic
ADediting_403175	chr13_52425190_-	intronic
ADediting_403176	chr13_52425201_-	intronic
ADediting_403177	chr13_52425206_-	intronic
ADediting_403178	chr13_52425227_-	intronic
ADediting_403179	chr13_52432090_-	intronic
ADediting_403180	chr13_52432147_-	intronic
ADediting_403181	chr13_52434483_-	intronic
ADediting_403182	chr13_52434552_-	intronic
ADediting_403183	chr13_52435034_-	intronic
ADediting_403184	chr13_52435246_-	intronic
ADediting_403185	chr13_52435250_-	intronic
ADediting_403186	chr13_52446941_-	intronic
ADediting_403187	chr13_52446943_-	intronic
ADediting_403188	chr13_52446948_-	intronic
ADediting_403189	chr13_52446961_-	intronic
ADediting_403190	chr13_52446987_-	intronic
ADediting_403191	chr13_52447172_-	intronic
ADediting_403192	chr13_52449159_-	intronic
ADediting_403193	chr13_52449178_-	intronic
ADediting_403194	chr13_52449256_-	intronic
ADediting_403195	chr13_52449263_-	intronic
ADediting_403196	chr13_52449301_-	intronic
ADediting_1535758	chr13_52417493_-	UTR3
ADediting_1535759	chr13_52418342_-	intronic
ADediting_1535760	chr13_52418351_-	intronic
ADediting_1535761	chr13_52418466_-	intronic
ADediting_1535762	chr13_52421097_-	intronic
ADediting_1535763	chr13_52421982_-	intronic
ADediting_1535764	chr13_52422007_-	intronic
ADediting_1535765	chr13_52422158_-	intronic
ADediting_1535766	chr13_52422166_-	intronic
ADediting_1535767	chr13_52422227_-	intronic
ADediting_1535768	chr13_52424063_-	intronic
ADediting_1535769	chr13_52431680_-	intronic
ADediting_1535770	chr13_52432187_-	intronic
ADediting_1617181	chr13_52417529_-	UTR3
ADediting_1617182	chr13_52418548_-	intronic
ADediting_1617183	chr13_52420500_-	intronic
ADediting_1617184	chr13_52420597_-	intronic
ADediting_1617185	chr13_52424026_-	intronic
ADediting_1617186	chr13_52424110_-	intronic
ADediting_1617187	chr13_52440099_-	intronic
ADediting_1617188	chr13_52449232_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_402853	chr13_52417387_-	SINE	Alu	Name=AluSp
ADediting_402854	chr13_52417407_-	SINE	Alu	Name=AluSp
ADediting_402855	chr13_52417423_-	SINE	Alu	Name=AluSp
ADediting_402856	chr13_52417426_-	SINE	Alu	Name=AluSp
ADediting_402857	chr13_52417428_-	SINE	Alu	Name=AluSp
ADediting_402858	chr13_52417429_-	SINE	Alu	Name=AluSp
ADediting_402859	chr13_52417433_-	SINE	Alu	Name=AluSp
ADediting_402860	chr13_52417457_-	SINE	Alu	Name=AluSp
ADediting_402861	chr13_52417466_-	SINE	Alu	Name=AluSp
ADediting_402862	chr13_52417472_-	SINE	Alu	Name=AluSp
ADediting_402863	chr13_52417498_-	SINE	Alu	Name=AluSp
ADediting_402864	chr13_52417499_-	SINE	Alu	Name=AluSp
ADediting_402865	chr13_52417521_-	SINE	Alu	Name=AluSp
ADediting_402866	chr13_52417525_-	SINE	Alu	Name=AluSp
ADediting_402867	chr13_52417528_-	SINE	Alu	Name=AluSp
ADediting_402868	chr13_52417530_-	SINE	Alu	Name=AluSp
ADediting_402869	chr13_52417538_-	SINE	Alu	Name=AluSp
ADediting_402870	chr13_52417539_-	SINE	Alu	Name=AluSp
ADediting_402871	chr13_52417553_-	SINE	Alu	Name=AluSp
ADediting_402872	chr13_52417554_-	SINE	Alu	Name=AluSp
ADediting_402873	chr13_52417563_-	SINE	Alu	Name=AluSp
ADediting_402874	chr13_52417567_-	SINE	Alu	Name=AluSp
ADediting_402875	chr13_52417572_-	SINE	Alu	Name=AluSp
ADediting_402876	chr13_52417573_-	SINE	Alu	Name=AluSp
ADediting_402877	chr13_52417584_-	SINE	Alu	Name=AluSp
ADediting_402878	chr13_52417602_-	SINE	Alu	Name=AluSp
ADediting_402879	chr13_52417627_-	SINE	Alu	Name=AluSp
ADediting_402880	chr13_52417632_-	SINE	Alu	Name=AluSp
ADediting_402881	chr13_52417633_-	SINE	Alu	Name=AluSp
ADediting_402882	chr13_52417639_-	SINE	Alu	Name=AluSp
ADediting_402883	chr13_52417641_-	SINE	Alu	Name=AluSp
ADediting_402884	chr13_52418320_-	SINE	Alu	Name=AluSg4
ADediting_402885	chr13_52418326_-	SINE	Alu	Name=AluSg4
ADediting_402886	chr13_52418332_-	SINE	Alu	Name=AluSg4
ADediting_402887	chr13_52418383_-	SINE	Alu	Name=AluSg4
ADediting_402888	chr13_52418395_-	SINE	Alu	Name=AluSg4
ADediting_402889	chr13_52418409_-	SINE	Alu	Name=AluSg4
ADediting_402890	chr13_52418412_-	SINE	Alu	Name=AluSg4
ADediting_402891	chr13_52418420_-	SINE	Alu	Name=AluSg4
ADediting_402892	chr13_52418453_-	SINE	Alu	Name=AluSg4
ADediting_402893	chr13_52418463_-	SINE	Alu	Name=AluSg4
ADediting_402894	chr13_52418488_-	SINE	Alu	Name=AluSg4
ADediting_402895	chr13_52418489_-	SINE	Alu	Name=AluSg4
ADediting_402896	chr13_52418492_-	SINE	Alu	Name=AluSg4
ADediting_402897	chr13_52418493_-	SINE	Alu	Name=AluSg4
ADediting_402898	chr13_52418512_-	SINE	Alu	Name=AluSg4
ADediting_402899	chr13_52418518_-	SINE	Alu	Name=AluSg4
ADediting_402900	chr13_52418519_-	SINE	Alu	Name=AluSg4
ADediting_402901	chr13_52418528_-	SINE	Alu	Name=AluSg4
ADediting_402902	chr13_52418540_-	SINE	Alu	Name=AluSg4
ADediting_402903	chr13_52418543_-	SINE	Alu	Name=AluSg4
ADediting_402904	chr13_52418555_-	SINE	Alu	Name=AluSg4
ADediting_402905	chr13_52419799_-	LINE	L1	Name=L1MA1
ADediting_402906	chr13_52419808_-	LINE	L1	Name=L1MA1
ADediting_402907	chr13_52419811_-	LINE	L1	Name=L1MA1
ADediting_402908	chr13_52419829_-	LINE	L1	Name=L1MA1
ADediting_402909	chr13_52419830_-	LINE	L1	Name=L1MA1
ADediting_402910	chr13_52419839_-	LINE	L1	Name=L1MA1
ADediting_402911	chr13_52419868_-	LINE	L1	Name=L1MA1
ADediting_402912	chr13_52419875_-	LINE	L1	Name=L1MA1
ADediting_402913	chr13_52419922_-	LINE	L1	Name=L1MA1
ADediting_402914	chr13_52419931_-	LINE	L1	Name=L1MA1
ADediting_402915	chr13_52419978_-	SINE	Alu	Name=AluSx
ADediting_402916	chr13_52419984_-	SINE	Alu	Name=AluSx
ADediting_402917	chr13_52419996_-	SINE	Alu	Name=AluSx
ADediting_402918	chr13_52419997_-	SINE	Alu	Name=AluSx
ADediting_402919	chr13_52420015_-	SINE	Alu	Name=AluSx
ADediting_402920	chr13_52420049_-	SINE	Alu	Name=AluSx
ADediting_402921	chr13_52420075_-	SINE	Alu	Name=AluSx
ADediting_402922	chr13_52420078_-	SINE	Alu	Name=AluSx
ADediting_402923	chr13_52420084_-	SINE	Alu	Name=AluSx
ADediting_402924	chr13_52420092_-	SINE	Alu	Name=AluSx
ADediting_402925	chr13_52420093_-	SINE	Alu	Name=AluSx
ADediting_402926	chr13_52420112_-	SINE	Alu	Name=AluSx
ADediting_402927	chr13_52420117_-	SINE	Alu	Name=AluSx
ADediting_402928	chr13_52420119_-	SINE	Alu	Name=AluSx
ADediting_402929	chr13_52420129_-	SINE	Alu	Name=AluSx
ADediting_402930	chr13_52420130_-	SINE	Alu	Name=AluSx
ADediting_402931	chr13_52420133_-	SINE	Alu	Name=AluSx
ADediting_402932	chr13_52420156_-	SINE	Alu	Name=AluSx
ADediting_402933	chr13_52420159_-	SINE	Alu	Name=AluSx
ADediting_402934	chr13_52420160_-	SINE	Alu	Name=AluSx
ADediting_402935	chr13_52420198_-	SINE	Alu	Name=AluSx
ADediting_402936	chr13_52420229_-	SINE	Alu	Name=AluSx
ADediting_402937	chr13_52420230_-	SINE	Alu	Name=AluSx
ADediting_402938	chr13_52420395_-	SINE	Alu	Name=AluSx1
ADediting_402939	chr13_52420398_-	SINE	Alu	Name=AluSx1
ADediting_402940	chr13_52420430_-	SINE	Alu	Name=AluSx1
ADediting_402941	chr13_52420431_-	SINE	Alu	Name=AluSx1
ADediting_402942	chr13_52420461_-	SINE	Alu	Name=AluSx1
ADediting_402943	chr13_52420465_-	SINE	Alu	Name=AluSx1
ADediting_402944	chr13_52420471_-	SINE	Alu	Name=AluSx1
ADediting_402945	chr13_52420497_-	SINE	Alu	Name=AluSx1
ADediting_402946	chr13_52420506_-	SINE	Alu	Name=AluSx1
ADediting_402947	chr13_52420508_-	SINE	Alu	Name=AluSx1
ADediting_402948	chr13_52420509_-	SINE	Alu	Name=AluSx1
ADediting_402949	chr13_52420510_-	SINE	Alu	Name=AluSx1
ADediting_402950	chr13_52420511_-	SINE	Alu	Name=AluSx1
ADediting_402951	chr13_52420512_-	SINE	Alu	Name=AluSx1
ADediting_402952	chr13_52420515_-	SINE	Alu	Name=AluSx1
ADediting_402953	chr13_52420521_-	SINE	Alu	Name=AluSx1
ADediting_402954	chr13_52420526_-	SINE	Alu	Name=AluSx1
ADediting_402955	chr13_52420536_-	SINE	Alu	Name=AluSx1
ADediting_402956	chr13_52420537_-	SINE	Alu	Name=AluSx1
ADediting_402957	chr13_52420549_-	SINE	Alu	Name=AluSx1
ADediting_402958	chr13_52420557_-	SINE	Alu	Name=AluSx1
ADediting_402959	chr13_52420564_-	SINE	Alu	Name=AluSx1
ADediting_402960	chr13_52420565_-	SINE	Alu	Name=AluSx1
ADediting_402961	chr13_52420575_-	SINE	Alu	Name=AluSx1
ADediting_402962	chr13_52420579_-	SINE	Alu	Name=AluSx1
ADediting_402963	chr13_52420605_-	SINE	Alu	Name=AluSx1
ADediting_402964	chr13_52420606_-	SINE	Alu	Name=AluSx1
ADediting_402965	chr13_52420668_-	LINE	L1	Name=L1MA1
ADediting_402966	chr13_52420669_-	LINE	L1	Name=L1MA1
ADediting_402967	chr13_52420674_-	LINE	L1	Name=L1MA1
ADediting_402968	chr13_52420676_-	LINE	L1	Name=L1MA1
ADediting_402969	chr13_52420680_-	LINE	L1	Name=L1MA1
ADediting_402970	chr13_52420696_-	LINE	L1	Name=L1MA1
ADediting_402971	chr13_52420709_-	LINE	L1	Name=L1MA1
ADediting_402972	chr13_52420729_-	LINE	L1	Name=L1MA1
ADediting_402973	chr13_52420732_-	LINE	L1	Name=L1MA1
ADediting_402974	chr13_52420740_-	LINE	L1	Name=L1MA1
ADediting_402975	chr13_52420747_-	LINE	L1	Name=L1MA1
ADediting_402976	chr13_52420750_-	LINE	L1	Name=L1MA1
ADediting_402977	chr13_52420755_-	LINE	L1	Name=L1MA1
ADediting_402978	chr13_52420758_-	LINE	L1	Name=L1MA1
ADediting_402979	chr13_52420803_-	LINE	L1	Name=L1MA1
ADediting_402980	chr13_52420844_-	SINE	Alu	Name=AluSx
ADediting_402981	chr13_52420854_-	SINE	Alu	Name=AluSx
ADediting_402982	chr13_52420860_-	SINE	Alu	Name=AluSx
ADediting_402983	chr13_52420891_-	SINE	Alu	Name=AluSx
ADediting_402984	chr13_52420895_-	SINE	Alu	Name=AluSx
ADediting_402985	chr13_52420904_-	SINE	Alu	Name=AluSx
ADediting_402986	chr13_52420905_-	SINE	Alu	Name=AluSx
ADediting_402987	chr13_52420916_-	SINE	Alu	Name=AluSx
ADediting_402988	chr13_52420927_-	SINE	Alu	Name=AluSx
ADediting_402989	chr13_52420928_-	SINE	Alu	Name=AluSx
ADediting_402990	chr13_52420929_-	SINE	Alu	Name=AluSx
ADediting_402991	chr13_52420955_-	SINE	Alu	Name=AluSx
ADediting_402992	chr13_52420958_-	SINE	Alu	Name=AluSx
ADediting_402993	chr13_52420981_-	SINE	Alu	Name=AluSx
ADediting_402994	chr13_52420999_-	SINE	Alu	Name=AluSx
ADediting_402995	chr13_52421009_-	SINE	Alu	Name=AluSx
ADediting_402996	chr13_52421012_-	SINE	Alu	Name=AluSx
ADediting_402997	chr13_52421013_-	SINE	Alu	Name=AluSx
ADediting_402998	chr13_52421021_-	SINE	Alu	Name=AluSx
ADediting_402999	chr13_52421034_-	SINE	Alu	Name=AluSx
ADediting_403000	chr13_52421035_-	SINE	Alu	Name=AluSx
ADediting_403001	chr13_52421038_-	SINE	Alu	Name=AluSx
ADediting_403002	chr13_52421039_-	SINE	Alu	Name=AluSx
ADediting_403003	chr13_52421058_-	SINE	Alu	Name=AluSx
ADediting_403004	chr13_52421059_-	SINE	Alu	Name=AluSx
ADediting_403005	chr13_52421064_-	SINE	Alu	Name=AluSx
ADediting_403006	chr13_52421074_-	SINE	Alu	Name=AluSx
ADediting_403007	chr13_52421077_-	SINE	Alu	Name=AluSx
ADediting_403008	chr13_52421083_-	SINE	Alu	Name=AluSx
ADediting_403009	chr13_52421105_-	SINE	Alu	Name=AluSx
ADediting_403010	chr13_52421247_-	LINE	L1	Name=L1MA6
ADediting_403011	chr13_52421248_-	LINE	L1	Name=L1MA6
ADediting_403012	chr13_52421268_-	LINE	L1	Name=L1MA6
ADediting_403013	chr13_52421292_-	LINE	L1	Name=L1MA6
ADediting_403014	chr13_52421319_-	LINE	L1	Name=L1MA6
ADediting_403015	chr13_52421320_-	LINE	L1	Name=L1MA6
ADediting_403016	chr13_52421564_-	SINE	Alu	Name=AluSx
ADediting_403017	chr13_52421594_-	SINE	Alu	Name=AluSx
ADediting_403018	chr13_52421598_-	SINE	Alu	Name=AluSx
ADediting_403019	chr13_52421611_-	SINE	Alu	Name=AluSx
ADediting_403020	chr13_52421615_-	SINE	Alu	Name=AluSx
ADediting_403021	chr13_52421619_-	SINE	Alu	Name=AluSx
ADediting_403022	chr13_52421620_-	SINE	Alu	Name=AluSx
ADediting_403023	chr13_52421627_-	SINE	Alu	Name=AluSx
ADediting_403024	chr13_52421633_-	SINE	Alu	Name=AluSx
ADediting_403025	chr13_52421637_-	SINE	Alu	Name=AluSx
ADediting_403026	chr13_52421646_-	SINE	Alu	Name=AluSx
ADediting_403027	chr13_52421650_-	SINE	Alu	Name=AluSx
ADediting_403028	chr13_52421659_-	SINE	Alu	Name=AluSx
ADediting_403029	chr13_52421660_-	SINE	Alu	Name=AluSx
ADediting_403030	chr13_52421702_-	SINE	Alu	Name=AluSx
ADediting_403031	chr13_52421703_-	SINE	Alu	Name=AluSx
ADediting_403032	chr13_52421717_-	SINE	Alu	Name=AluSx
ADediting_403033	chr13_52421719_-	SINE	Alu	Name=AluSx
ADediting_403034	chr13_52421727_-	SINE	Alu	Name=AluSx
ADediting_403035	chr13_52421728_-	SINE	Alu	Name=AluSx
ADediting_403036	chr13_52421737_-	SINE	Alu	Name=AluSx
ADediting_403037	chr13_52421740_-	SINE	Alu	Name=AluSx
ADediting_403038	chr13_52421748_-	SINE	Alu	Name=AluSx
ADediting_403039	chr13_52421751_-	SINE	Alu	Name=AluSx
ADediting_403040	chr13_52421756_-	SINE	Alu	Name=AluSx
ADediting_403041	chr13_52421763_-	SINE	Alu	Name=AluSx
ADediting_403042	chr13_52421766_-	SINE	Alu	Name=AluSx
ADediting_403043	chr13_52421791_-	SINE	Alu	Name=AluSx
ADediting_403044	chr13_52421796_-	SINE	Alu	Name=AluSx
ADediting_403045	chr13_52421797_-	SINE	Alu	Name=AluSx
ADediting_403046	chr13_52421803_-	SINE	Alu	Name=AluSx
ADediting_403047	chr13_52421810_-	SINE	Alu	Name=AluSx
ADediting_403048	chr13_52421842_-	LINE	L1	Name=L1MA4A
ADediting_403049	chr13_52421853_-	LINE	L1	Name=L1MA4A
ADediting_403050	chr13_52421860_-	LINE	L1	Name=L1MA4A
ADediting_403051	chr13_52421861_-	LINE	L1	Name=L1MA4A
ADediting_403052	chr13_52421862_-	LINE	L1	Name=L1MA4A
ADediting_403053	chr13_52421927_-	LINE	L1	Name=L1MA4A
ADediting_403054	chr13_52421944_-	LINE	L1	Name=L1MA4A
ADediting_403055	chr13_52421957_-	LINE	L1	Name=L1MA4A
ADediting_403056	chr13_52421966_-	LINE	L1	Name=L1MA4A
ADediting_403057	chr13_52421970_-	LINE	L1	Name=L1MA4A
ADediting_403058	chr13_52421972_-	LINE	L1	Name=L1MA4A
ADediting_403059	chr13_52421983_-	LINE	L1	Name=L1MA4A
ADediting_403060	chr13_52421995_-	LINE	L1	Name=L1MA4A
ADediting_403061	chr13_52421998_-	LINE	L1	Name=L1MA4A
ADediting_403062	chr13_52422002_-	LINE	L1	Name=L1MA4A
ADediting_403063	chr13_52422005_-	LINE	L1	Name=L1MA4A
ADediting_403064	chr13_52422006_-	LINE	L1	Name=L1MA4A
ADediting_403065	chr13_52422014_-	LINE	L1	Name=L1MA4A
ADediting_403066	chr13_52422087_-	LINE	L1	Name=L1MA4A
ADediting_403067	chr13_52422090_-	LINE	L1	Name=L1MA4A
ADediting_403068	chr13_52422100_-	LINE	L1	Name=L1MA4A
ADediting_403069	chr13_52422106_-	LINE	L1	Name=L1MA4A
ADediting_403070	chr13_52422120_-	LINE	L1	Name=L1MA4A
ADediting_403071	chr13_52422129_-	LINE	L1	Name=L1MA4A
ADediting_403072	chr13_52422139_-	LINE	L1	Name=L1MA4A
ADediting_403073	chr13_52422141_-	LINE	L1	Name=L1MA4A
ADediting_403074	chr13_52422148_-	LINE	L1	Name=L1MA4A
ADediting_403075	chr13_52422155_-	LINE	L1	Name=L1MA4A
ADediting_403076	chr13_52422157_-	LINE	L1	Name=L1MA4A
ADediting_403077	chr13_52422160_-	LINE	L1	Name=L1MA4A
ADediting_403078	chr13_52422162_-	LINE	L1	Name=L1MA4A
ADediting_403079	chr13_52422175_-	LINE	L1	Name=L1MA4A
ADediting_403080	chr13_52422176_-	LINE	L1	Name=L1MA4A
ADediting_403081	chr13_52422180_-	LINE	L1	Name=L1MA4A
ADediting_403082	chr13_52422181_-	LINE	L1	Name=L1MA4A
ADediting_403083	chr13_52422182_-	LINE	L1	Name=L1MA4A
ADediting_403084	chr13_52422183_-	LINE	L1	Name=L1MA4A
ADediting_403085	chr13_52422184_-	LINE	L1	Name=L1MA4A
ADediting_403086	chr13_52422185_-	LINE	L1	Name=L1MA4A
ADediting_403087	chr13_52422213_-	LINE	L1	Name=L1MA4A
ADediting_403088	chr13_52422215_-	LINE	L1	Name=L1MA4A
ADediting_403089	chr13_52422216_-	LINE	L1	Name=L1MA4A
ADediting_403090	chr13_52422217_-	LINE	L1	Name=L1MA4A
ADediting_403091	chr13_52422221_-	LINE	L1	Name=L1MA4A
ADediting_403092	chr13_52422222_-	LINE	L1	Name=L1MA4A
ADediting_403093	chr13_52422223_-	LINE	L1	Name=L1MA4A
ADediting_403094	chr13_52422225_-	LINE	L1	Name=L1MA4A
ADediting_403095	chr13_52422229_-	LINE	L1	Name=L1MA4A
ADediting_403096	chr13_52422231_-	LINE	L1	Name=L1MA4A
ADediting_403097	chr13_52422235_-	LINE	L1	Name=L1MA4A
ADediting_403098	chr13_52422236_-	LINE	L1	Name=L1MA4A
ADediting_403099	chr13_52422239_-	LINE	L1	Name=L1MA4A
ADediting_403100	chr13_52422240_-	LINE	L1	Name=L1MA4A
ADediting_403101	chr13_52422244_-	LINE	L1	Name=L1MA4A
ADediting_403102	chr13_52422245_-	LINE	L1	Name=L1MA4A
ADediting_403103	chr13_52422250_-	LINE	L1	Name=L1MA4A
ADediting_403104	chr13_52422257_-	LINE	L1	Name=L1MA4A
ADediting_403105	chr13_52422273_-	LINE	L1	Name=L1MA4A
ADediting_403106	chr13_52422291_-	LINE	L1	Name=L1MA4A
ADediting_403107	chr13_52422298_-	LINE	L1	Name=L1MA4A
ADediting_403108	chr13_52422302_-	LINE	L1	Name=L1MA4A
ADediting_403109	chr13_52422346_-	LINE	L1	Name=L1MA4A
ADediting_403110	chr13_52423267_-	LINE	L1	Name=L1MA6
ADediting_403111	chr13_52423272_-	LINE	L1	Name=L1MA6
ADediting_403112	chr13_52423910_-	SINE	Alu	Name=AluSz
ADediting_403113	chr13_52423925_-	SINE	Alu	Name=AluSz
ADediting_403114	chr13_52423930_-	SINE	Alu	Name=AluSz
ADediting_403115	chr13_52423934_-	SINE	Alu	Name=AluSz
ADediting_403116	chr13_52423954_-	SINE	Alu	Name=AluSz
ADediting_403117	chr13_52423963_-	SINE	Alu	Name=AluSz
ADediting_403118	chr13_52423969_-	SINE	Alu	Name=AluSz
ADediting_403119	chr13_52423973_-	SINE	Alu	Name=AluSz
ADediting_403120	chr13_52423986_-	SINE	Alu	Name=AluSz
ADediting_403121	chr13_52423990_-	SINE	Alu	Name=AluSz
ADediting_403122	chr13_52423996_-	SINE	Alu	Name=AluSz
ADediting_403123	chr13_52424022_-	SINE	Alu	Name=AluSz
ADediting_403124	chr13_52424025_-	SINE	Alu	Name=AluSz
ADediting_403125	chr13_52424028_-	SINE	Alu	Name=AluSz
ADediting_403126	chr13_52424030_-	SINE	Alu	Name=AluSz
ADediting_403127	chr13_52424033_-	SINE	Alu	Name=AluSz
ADediting_403128	chr13_52424035_-	SINE	Alu	Name=AluSz
ADediting_403129	chr13_52424036_-	SINE	Alu	Name=AluSz
ADediting_403130	chr13_52424037_-	SINE	Alu	Name=AluSz
ADediting_403131	chr13_52424038_-	SINE	Alu	Name=AluSz
ADediting_403132	chr13_52424039_-	SINE	Alu	Name=AluSz
ADediting_403133	chr13_52424042_-	SINE	Alu	Name=AluSz
ADediting_403134	chr13_52424053_-	SINE	Alu	Name=AluSz
ADediting_403135	chr13_52424067_-	SINE	Alu	Name=AluSz
ADediting_403136	chr13_52424068_-	SINE	Alu	Name=AluSz
ADediting_403137	chr13_52424073_-	SINE	Alu	Name=AluSz
ADediting_403138	chr13_52424084_-	SINE	Alu	Name=AluSz
ADediting_403139	chr13_52424087_-	SINE	Alu	Name=AluSz
ADediting_403140	chr13_52424092_-	SINE	Alu	Name=AluSz
ADediting_403141	chr13_52424102_-	SINE	Alu	Name=AluSz
ADediting_403142	chr13_52424105_-	SINE	Alu	Name=AluSz
ADediting_403143	chr13_52424132_-	SINE	Alu	Name=AluSz
ADediting_403144	chr13_52424133_-	SINE	Alu	Name=AluSz
ADediting_403145	chr13_52424141_-	SINE	Alu	Name=AluSz
ADediting_403146	chr13_52424149_-	SINE	Alu	Name=AluSz
ADediting_403147	chr13_52424729_-	SINE	Alu	Name=AluSx1
ADediting_403148	chr13_52424741_-	SINE	Alu	Name=AluSx1
ADediting_403149	chr13_52424769_-	SINE	Alu	Name=AluSx1
ADediting_403150	chr13_52424789_-	SINE	Alu	Name=AluSx1
ADediting_403151	chr13_52424794_-	SINE	Alu	Name=AluSx1
ADediting_403152	chr13_52424814_-	SINE	Alu	Name=AluSx1
ADediting_403153	chr13_52424818_-	SINE	Alu	Name=AluSx1
ADediting_403154	chr13_52424819_-	SINE	Alu	Name=AluSx1
ADediting_403155	chr13_52424820_-	SINE	Alu	Name=AluSx1
ADediting_403156	chr13_52424823_-	SINE	Alu	Name=AluSx1
ADediting_403157	chr13_52424829_-	SINE	Alu	Name=AluSx1
ADediting_403158	chr13_52424864_-	SINE	Alu	Name=AluSx1
ADediting_403159	chr13_52424866_-	SINE	Alu	Name=AluSx1
ADediting_403160	chr13_52424876_-	SINE	Alu	Name=AluSx1
ADediting_403161	chr13_52424888_-	SINE	Alu	Name=AluSx1
ADediting_403162	chr13_52424905_-	SINE	Alu	Name=AluSx1
ADediting_403163	chr13_52424925_-	SINE	Alu	Name=AluSx1
ADediting_403164	chr13_52424931_-	SINE	Alu	Name=AluSx1
ADediting_403165	chr13_52424936_-	SINE	Alu	Name=AluSx1
ADediting_403166	chr13_52424941_-	SINE	Alu	Name=AluSx1
ADediting_403167	chr13_52425056_-	SINE	Alu	Name=AluYc
ADediting_403168	chr13_52425084_-	SINE	Alu	Name=AluYc
ADediting_403169	chr13_52425090_-	SINE	Alu	Name=AluYc
ADediting_403170	chr13_52425099_-	SINE	Alu	Name=AluYc
ADediting_403171	chr13_52425100_-	SINE	Alu	Name=AluYc
ADediting_403172	chr13_52425131_-	SINE	Alu	Name=AluYc
ADediting_403173	chr13_52425141_-	SINE	Alu	Name=AluYc
ADediting_403174	chr13_52425177_-	SINE	Alu	Name=AluYc
ADediting_403175	chr13_52425190_-	SINE	Alu	Name=AluYc
ADediting_403176	chr13_52425201_-	SINE	Alu	Name=AluYc
ADediting_403177	chr13_52425206_-	SINE	Alu	Name=AluYc
ADediting_403178	chr13_52425227_-	SINE	Alu	Name=AluYc
ADediting_403179	chr13_52432090_-	SINE	Alu	Name=AluY
ADediting_403180	chr13_52432147_-	SINE	Alu	Name=AluY
ADediting_403181	chr13_52434483_-	SINE	Alu	Name=AluSg
ADediting_403182	chr13_52434552_-	SINE	Alu	Name=AluSg
ADediting_403183	chr13_52435034_-	SINE	Alu	Name=AluSp
ADediting_403184	chr13_52435246_-	SINE	Alu	Name=AluSp
ADediting_403185	chr13_52435250_-	SINE	Alu	Name=AluSp
ADediting_403186	chr13_52446941_-	SINE	Alu	Name=AluSq2
ADediting_403187	chr13_52446943_-	SINE	Alu	Name=AluSq2
ADediting_403188	chr13_52446948_-	SINE	Alu	Name=AluSq2
ADediting_403189	chr13_52446961_-	SINE	Alu	Name=AluSq2
ADediting_403190	chr13_52446987_-	SINE	Alu	Name=AluSq2
ADediting_403191	chr13_52447172_-	SINE	Alu	Name=AluSq2
ADediting_403192	chr13_52449159_-	SINE	Alu	Name=AluSx1
ADediting_403193	chr13_52449178_-	SINE	Alu	Name=AluSx1
ADediting_403194	chr13_52449256_-	SINE	Alu	Name=AluSx1
ADediting_403195	chr13_52449263_-	SINE	Alu	Name=AluSx1
ADediting_403196	chr13_52449301_-	SINE	Alu	Name=AluSx1
ADediting_1535758	chr13_52417493_-	SINE	Alu	Name=AluSp
ADediting_1535759	chr13_52418342_-	SINE	Alu	Name=AluSg4
ADediting_1535760	chr13_52418351_-	SINE	Alu	Name=AluSg4
ADediting_1535761	chr13_52418466_-	SINE	Alu	Name=AluSg4
ADediting_1535762	chr13_52421097_-	SINE	Alu	Name=AluSx
ADediting_1535763	chr13_52421982_-	LINE	L1	Name=L1MA4A
ADediting_1535764	chr13_52422007_-	LINE	L1	Name=L1MA4A
ADediting_1535765	chr13_52422158_-	LINE	L1	Name=L1MA4A
ADediting_1535766	chr13_52422166_-	LINE	L1	Name=L1MA4A
ADediting_1535767	chr13_52422227_-	LINE	L1	Name=L1MA4A
ADediting_1535768	chr13_52424063_-	SINE	Alu	Name=AluSz
ADediting_1535769	chr13_52431680_-	SINE	Alu	Name=AluSg
ADediting_1535770	chr13_52432187_-	SINE	Alu	Name=AluY
ADediting_1617181	chr13_52417529_-	SINE	Alu	Name=AluSp
ADediting_1617182	chr13_52418548_-	SINE	Alu	Name=AluSg4
ADediting_1617183	chr13_52420500_-	SINE	Alu	Name=AluSx1
ADediting_1617184	chr13_52420597_-	SINE	Alu	Name=AluSx1
ADediting_1617185	chr13_52424026_-	SINE	Alu	Name=AluSz
ADediting_1617186	chr13_52424110_-	SINE	Alu	Name=AluSz
ADediting_1617187	chr13_52440099_-	SINE	Alu	Name=AluSz
ADediting_1617188	chr13_52449232_-	SINE	Alu	Name=AluSx1

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RNA A-to-I editing events in the alternative splicing sites for VPS36

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	ADeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	ADediting_402859	chr13_52417433_-	52417431:52417439	5ss	4i	GCGGTGAGC	8.02	GCGGTGGGC	4.70

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VPS36

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

Top

Protein coding region RNA A-to-I editings for VPS36

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for VPS36

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1337757	chr7_5495852_-	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-589-3p	chr13	52414210	52414216	7mer-m8	52414209	52414232	140	-16.31
ADediting_1337757	chr7_5495852_-	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-589-3p	chr13	52414210	52414216	7mer-m8	52414209	52414232	140	-16.31
ADediting_1337758	chr7_5495892_-	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-589-5p	chr13	52414353	52414359	7mer-m8	52414352	52414371	149	-19.57
ADediting_1337758	chr7_5495892_-	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-589-5p	chr13	52414353	52414359	7mer-m8	52414352	52414371	149	-19.57
ADediting_1471003	chr9_63819626_+	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-4477b	chr13	52415545	52415552	8mer-1a	52415545	52415568	149	-11.05
ADediting_1471003	chr9_63819626_+	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-4477b	chr13	52415545	52415552	8mer-1a	52415545	52415568	149	-11.05
ADediting_1556067	chr19_40282625_-	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-641	chr13	52414249	52414256	8mer-1a	52414249	52414273	156	-15.73
ADediting_1556067	chr19_40282625_-	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-641	chr13	52414249	52414256	8mer-1a	52414249	52414273	156	-15.73
ADediting_843620	chr2_207754818_+	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-4775	chr13	52415609	52415615	7mer-m8	52415608	52415629	146	-7.99
ADediting_843620	chr2_207754818_+	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-4775	chr13	52415609	52415615	7mer-m8	52415608	52415629	146	-7.99
ADediting_98288	chr1_32086990_+	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-5585-3p	chr13	52414083	52414090	8mer-1a	52414083	52414104	150	-15.35
ADediting_98288	chr1_32086990_+	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-5585-3p	chr13	52414083	52414090	8mer-1a	52414083	52414104	150	-15.35
ADediting_98289	chr1_32086992_+	ENSG00000136100.14	ENST00000378060.9	VPS36-201	hsa-miR-5585-3p	chr13	52412638	52412645	8mer-1a	52412638	52412656	151	-14.13
ADediting_98289	chr1_32086992_+	ENSG00000136100.14	ENST00000611132.4	VPS36-207	hsa-miR-5585-3p	chr13	52412638	52412645	8mer-1a	52412638	52412656	151	-14.13

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1556067

chr19_40282625_-

ENSG00000136100.14

ENST00000378060.9

VPS36-201

hsa-miR-641

chr13

52415347

52415353

7mer-m8

52415346

52415369

143

-9.56

ADediting_1556067

chr19_40282625_-

ENSG00000136100.14

ENST00000611132.4

VPS36-207

hsa-miR-641

chr13

52415347

52415353

7mer-m8

52415346

52415369

143

-9.56

ADediting_1631458

chr19_40282624_-

ENSG00000136100.14

ENST00000378060.9

VPS36-201

hsa-miR-641

chr13

52415347

52415353

7mer-m8

52415346

52415369

143

-9.56

ADediting_1631458

chr19_40282624_-

ENSG00000136100.14

ENST00000611132.4

VPS36-207

hsa-miR-641

chr13

52415347

52415353

7mer-m8

52415346

52415369

143

-9.56

ADediting_496066

chr15_66496985_-

ENSG00000136100.14

ENST00000378060.9

VPS36-201

hsa-miR-4512

chr13

52413744

52413751

8mer-1a

52413744

52413765

149

-14.5

ADediting_496066

chr15_66496985_-

ENSG00000136100.14

ENST00000611132.4

VPS36-207

hsa-miR-4512

chr13

52413744

52413751

8mer-1a

52413744

52413765

149

-14.5

ADediting_843620

chr2_207754818_+

ENSG00000136100.14

ENST00000378060.9

VPS36-201

hsa-miR-4775

chr13

52413529

52413535

7mer-m8

52413528

52413549

141

-3.88

ADediting_843620

chr2_207754818_+

ENSG00000136100.14

ENST00000378060.9

VPS36-201

hsa-miR-4775

chr13

52414148

52414154

7mer-m8

52414147

52414170

147

-10.34

ADediting_843620

chr2_207754818_+

ENSG00000136100.14

ENST00000611132.4

VPS36-207

hsa-miR-4775

chr13

52413529

52413535

7mer-m8

52413528

52413549

141

-3.88

ADediting_843620

chr2_207754818_+

ENSG00000136100.14

ENST00000611132.4

VPS36-207

hsa-miR-4775

chr13

52414148

52414154

7mer-m8

52414147

52414170

147

-10.34

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for VPS36

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for VPS36

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
CER	ADediting_402855	chr13_52417423_-	3.60694754009204e-08	0.431234806155517	2.45100146834668e-07	0.406486714242577	0.153552853646668	0.117100038211551
CER	ADediting_402856	chr13_52417426_-	0.00301825531881183	0.240607372243657	7.86910250012299e-06	0.355831326199225	0.119396871741169	0.12770094893405
CER	ADediting_402857	chr13_52417428_-	1.16100675640746e-08	0.444993168854239	3.47629937369582e-12	0.528875893542364	0.221589581085212	0.100388844286068
CER	ADediting_402858	chr13_52417429_-	1.20587010046629e-09	0.470778267757685	4.1412082462363e-11	0.505586447849967	0.0532562302949429	0.15814388828384
CER	ADediting_402859	chr13_52417433_-	4.02871381226973e-05	0.328629146704267	1.04727234037101e-07	0.417714507907445	0.0270000028637133	0.18059305909561
CER	ADediting_402860	chr13_52417457_-	2.85170168729801e-11	0.509208179677798	7.87880296983432e-15	0.579502593076724	0.201867130522155	0.1047948652392
CER	ADediting_402861	chr13_52417466_-	5.61338998385164e-11	0.502601834050911	6.67066837365291e-14	0.562701201964318	0.489583979127721	0.0568474263345874
CER	ADediting_402862	chr13_52417472_-	3.13104799918658e-09	0.460173990873879	3.62872625362274e-09	0.458501786872298	0.260427533664126	0.0924634935056742
CER	ADediting_402864	chr13_52417499_-	0.000674476778504651	0.274531787871474	2.42658931817512e-06	0.373980698185149	0.410544714521155	0.0676814907456318
CER	ADediting_402865	chr13_52417521_-	1.04186677829019e-05	0.35133270787583	4.38180608417471e-05	0.327158345133326	0.801926890311859	-0.0206527387400582
CER	ADediting_402871	chr13_52417553_-	0.000280571116303155	0.292533183457863	6.69108090993047e-05	0.319630334062851	0.588144482048597	-0.0445663234957178
CER	ADediting_402873	chr13_52417563_-	0.00208876699403152	0.249365908756608	6.75043302699336e-05	0.319471148598444	0.761981784011032	0.0249347428327729
CER	ADediting_402875	chr13_52417572_-	6.303435057223e-07	0.393511682119584	3.07432340651509e-08	0.433211431214027	0.16954197436349	0.112745466091787
CER	ADediting_402876	chr13_52417573_-	8.00766046293475e-09	0.44937219538272	1.29091310284076e-07	0.414990457295031	0.294667289192305	0.0861251360127483
CER	ADediting_402878	chr13_52417602_-	0.000186723922720533	0.300502309891543	7.86075811548962e-06	0.355848203019425	0.0955527172382292	0.136598264468239
DLPFC	ADediting_402879	chr13_52417627_-	3.97808946728805e-08	0.305653097559871	2.65748600152115e-05	0.236170562159588	0.000602372319991508	0.193774654247119
CER	ADediting_402879	chr13_52417627_-	3.00845564770628e-18	0.634140765795121	1.44746498657732e-16	0.608559276618292	0.0337278835029389	0.173501862170914
CER	ADediting_402880	chr13_52417632_-	3.14659485690902e-14	0.568720490090038	2.94182117225502e-12	0.530383243377129	0.0231935867669277	0.185305335171485
CER	ADediting_402881	chr13_52417633_-	1.49133110743129e-15	0.591959631909494	1.74701727191692e-12	0.535041204717591	0.00411598145393805	0.232980146538176
DLPFC	ADediting_402882	chr13_52417639_-	7.23204890251671e-08	0.300002984025408	3.10759778968458e-05	0.234227761307608	0.000262810006848032	0.205881288966054
CER	ADediting_402882	chr13_52417639_-	1.73191726567197e-15	0.590861875641353	3.56126004366188e-11	0.507056233063351	0.0174724822190863	0.193826992543512
CER	ADediting_402883	chr13_52417641_-	0.000185711929147998	0.300607125680313	0.00038868416921931	0.285982928212086	0.60707733523145	-0.0423235565247004
CER	ADediting_402884	chr13_52418320_-	1.21037444497579e-12	0.538279142163142	5.6574638545447e-14	0.564031393794561	0.477880382210508	0.0583870263625432
DLPFC	ADediting_402885	chr13_52418326_-	7.29483893439602e-05	0.223330124278356	0.138313428490236	0.0843683596939453	3.32788964361352e-11	0.365030448868711
CER	ADediting_402885	chr13_52418326_-	6.27039807925044e-13	0.543996866233682	1.2912336469999e-13	0.557308109435651	0.242563944824724	0.0959984949352767
CER	ADediting_402886	chr13_52418332_-	1.2804871164286e-05	0.347982775410394	1.16238762043525e-10	0.495340012499847	0.123493838389528	0.12631515601275
CER	ADediting_402887	chr13_52418383_-	5.69996046975072e-06	0.360917367652129	4.17847181863539e-07	0.399227094394902	0.990568704211582	0.000973294024862459
CER	ADediting_402888	chr13_52418395_-	4.44496184097624e-05	0.326907066881222	5.63282464244961e-08	0.425652647381189	0.69307980168743	-0.0324886785285741
CER	ADediting_402890	chr13_52418412_-	3.01169027591392e-06	0.370729808602396	1.21858675504714e-08	0.444417990434132	0.548413635438774	-0.0493843505902976
CER	ADediting_402891	chr13_52418420_-	3.17896255455363e-06	0.369910794241112	2.21550143836025e-07	0.407842279978695	0.730970360999188	0.0283051712241782
CER	ADediting_402892	chr13_52418453_-	0.0119064047096523	0.204872196831582	5.49597729484696e-05	0.323154088941256	0.516496456442748	-0.0533794203810661
CER	ADediting_402893	chr13_52418463_-	0.000488986776695666	0.281272580797716	1.46808474416562e-06	0.381410167937403	0.609508337129785	-0.0420378595602866
DLPFC	ADediting_402894	chr13_52418488_-	0.000343792812101196	0.202037266831424	0.11704670044599	0.0891989627426756	1.2155903359014e-09	0.336459733524124
CER	ADediting_402894	chr13_52418488_-	0.00112380038585901	0.263466131775283	1.73151437098976e-06	0.378990362246745	0.701290126221125	0.0315754676531502
DLPFC	ADediting_402895	chr13_52418489_-	0.000359336123212621	0.201397642266869	0.378208990935556	0.0502201476429626	6.68878841996597e-19	0.475591332360808
CER	ADediting_402895	chr13_52418489_-	0.000384725327806405	0.286191083671706	1.1133640459589e-06	0.385422360790353	0.800913124928005	-0.0207606822468524
CER	ADediting_402896	chr13_52418492_-	0.0179315580515271	0.193060222814784	8.67825388818259e-05	0.314905133257493	0.65939973372349	-0.036278072129924
CER	ADediting_402897	chr13_52418493_-	0.0118614032295203	0.204978616663041	5.74119527902907e-05	0.322376094604062	0.571419030796573	-0.0465752079092424
CER	ADediting_402898	chr13_52418512_-	0.00119768032026538	0.262052761969748	1.23572113456982e-05	0.348563562110464	0.346968918511423	-0.0773220616357966
DLPFC	ADediting_402899	chr13_52418518_-	0.00278392565982847	0.169312991614383	0.289774783545399	0.0603142388639949	5.11496669188864e-09	0.324185965162943
CER	ADediting_402899	chr13_52418518_-	0.000113109898193243	0.3100080565091	1.67037939510353e-07	0.411600726733395	0.680506719111071	0.0338949063602654
CER	ADediting_402900	chr13_52418519_-	0.0019749066852967	0.250673350505305	2.17525867932922e-05	0.339195161549581	0.67364259997238	-0.0346667474085541
CER	ADediting_402902	chr13_52418540_-	3.66360881742101e-05	0.33028323898568	2.67928601199527e-08	0.434902840797788	0.932851016805523	0.00693762029217101
DLPFC	ADediting_402903	chr13_52418543_-	0.000364530066468997	0.201189637018487	0.794684390802213	0.0148393496474207	2.7899928421349e-17	0.455443166459736
CER	ADediting_402903	chr13_52418543_-	0.000724511211125201	0.273008425371725	3.40634187114245e-06	0.368860764986755	0.148876241263215	0.118437801178252
CER	ADediting_402905	chr13_52419799_-	1.60580099780196e-16	0.607840605564496	1.24207579433126e-17	0.625046603529411	0.000804087558386366	0.270774216409664
CER	ADediting_402906	chr13_52419808_-	1.20866956414912e-07	0.415850405197941	4.09785629152462e-08	0.429647101792348	0.764688283258204	0.0246426251052815
CER	ADediting_402907	chr13_52419811_-	1.48069157541669e-09	0.468526904690298	1.31213803230641e-09	0.469854109636747	0.0371274405723659	0.170366244151524
CER	ADediting_402908	chr13_52419829_-	3.12563586203062e-10	0.485190541585098	2.15631562357582e-09	0.464362199924161	0.0824825378274549	0.142249430015685
CER	ADediting_402909	chr13_52419830_-	3.43097766439525e-12	0.52899465598827	3.35939532093633e-13	0.549324349656575	0.000856820705620423	0.269403057807264
CER	ADediting_402911	chr13_52419868_-	2.40667693776051e-16	0.605021933066358	2.44847454719074e-13	0.551988900730091	0.00535583223357466	0.226314514553551
CER	ADediting_402912	chr13_52419875_-	1.25557587218111e-18	0.639598804603014	4.44702001708485e-15	0.583843175709884	0.000704129643133038	0.273616918558637
TCX	ADediting_402912	chr13_52419875_-	2.78445976617729e-05	0.335008339789506	0.00177341073594515	0.253164862862656	0.129493973603004	0.12434834318908
CER	ADediting_402914	chr13_52419931_-	6.2818066903665e-10	0.477823038247484	1.73766583306801e-09	0.466760627433984	0.793264088699708	0.0215762888177263
CER	ADediting_402915	chr13_52419978_-	8.07503418826938e-08	0.421067394896339	6.75523333750777e-09	0.451356723666142	0.150432531546574	0.117989142972578
CER	ADediting_402916	chr13_52419984_-	4.21181787584133e-08	0.429304729251762	8.4797740645127e-10	0.474601770362162	0.120032073403459	0.127483704746973
CER	ADediting_402917	chr13_52419996_-	2.64982690513711e-08	0.435038408286319	4.09979467016812e-09	0.457111344408545	0.289094704912928	0.0871217041562829
CER	ADediting_402918	chr13_52419997_-	1.73745854780811e-05	0.342954151365919	1.64209208486453e-06	0.379769944107731	0.457764612804913	0.0610818822208222
CER	ADediting_402919	chr13_52420015_-	0.000118665054842199	0.309112720956212	3.32693647661272e-05	0.331952024106895	0.445104798626686	-0.0628116452897532
CER	ADediting_402963	chr13_52420605_-	0.00605857528590965	0.22312931586987	2.23388470725937e-05	0.338747084584951	0.321345284858969	0.0815188198255801
CER	ADediting_402964	chr13_52420606_-	0.00028379326402299	0.292306344052273	6.50952393690137e-08	0.423819225986019	0.260534436097883	0.0924428490458333
CER	ADediting_402969	chr13_52420680_-	1.26173005645886e-05	0.348223755196639	2.75445589701576e-10	0.486506351468794	0.582552742924041	0.0452349619280259
CER	ADediting_402970	chr13_52420696_-	0.000109012185192572	0.310695200838545	2.1198958113174e-09	0.464552142009694	0.430292280031628	0.0648712082585069
CER	ADediting_402971	chr13_52420709_-	0.000198178306819936	0.299351421103307	1.0358103556452e-06	0.38646108756315	0.959688414630811	-0.00416174594901701
CER	ADediting_402973	chr13_52420732_-	1.2222949198856e-07	0.415704136485287	2.37289578703108e-10	0.488051196178295	0.589077255350216	0.044455070388166
CER	ADediting_402978	chr13_52420758_-	7.21748321217206e-05	0.318262356788357	0.000221392029496618	0.297197336022653	0.637189117923854	0.0388188504414877
CER	ADediting_402979	chr13_52420803_-	5.30676018536922e-07	0.395917290515033	3.37887759967424e-07	0.402138311063563	0.327055676977611	0.0805654997102573
CER	ADediting_402981	chr13_52420854_-	7.48506682092957e-06	0.356626177580647	5.97303204075569e-08	0.424910684833259	0.862157232475651	0.0142955934568652
CER	ADediting_402982	chr13_52420860_-	1.07414017391635e-05	0.350839560654555	1.90068833061766e-08	0.439085318794142	0.190404642601752	0.107499871988986
CER	ADediting_402983	chr13_52420891_-	6.47906857150236e-07	0.393125803172429	2.96230661641413e-07	0.403927901352285	0.198639602830887	0.105545016506055
CER	ADediting_402984	chr13_52420895_-	1.83450663753226e-07	0.410358565461118	7.24539866161471e-07	0.391551083017141	0.137849413733771	0.121722920335083
CER	ADediting_402985	chr13_52420904_-	4.13522841792584e-07	0.399370327687566	2.20216506729167e-07	0.407923111621262	0.165655874997775	0.113774648859389
CER	ADediting_402986	chr13_52420905_-	3.51716944522152e-05	0.330990596740111	4.03169332144788e-05	0.32861623689744	0.0788836071103845	0.143930867620745
CER	ADediting_402992	chr13_52420958_-	6.63361440263503e-05	0.319785727444981	0.000209263679750994	0.298295069619851	0.783711725595528	-0.0225978067664462
CER	ADediting_402994	chr13_52420999_-	1.41925349902597e-06	0.381903767105457	2.75824844098821e-06	0.372056987852006	0.989362566165281	0.00109777234974164
CER	ADediting_402995	chr13_52421009_-	3.88841408662543e-07	0.400216282360274	3.05629014855113e-07	0.403504031602453	0.665877596974074	-0.035543547441983
CER	ADediting_402996	chr13_52421012_-	1.93627189653403e-07	0.409640748923617	3.74455068573032e-07	0.400733354518275	0.834590993903663	-0.0171924101103761
CER	ADediting_402997	chr13_52421013_-	7.40934144880958e-07	0.391234917927077	6.73729567433769e-08	0.423381717274134	0.833998132228343	-0.0172549306126181
CER	ADediting_402998	chr13_52421021_-	0.000515077224052267	0.280194480766098	6.47184119531117e-05	0.320230042416654	0.50207498164127	-0.0552257189810012
CER	ADediting_403001	chr13_52421038_-	1.06021015774235e-05	0.351050673870434	3.6853323249463e-05	0.330180577005574	0.879233726230396	-0.0125100715247612
CER	ADediting_403002	chr13_52421039_-	6.12674966818509e-08	0.424588645660273	7.0145601620384e-06	0.357654369908598	0.865926684722094	-0.0139009150519519
CER	ADediting_403003	chr13_52421058_-	2.62204287395991e-05	0.336033042406386	1.7234317446002e-06	0.379059232630322	0.604991521864492	0.0425690893988655
CER	ADediting_403004	chr13_52421059_-	6.5117635886991e-07	0.393055073181972	1.66199392834801e-06	0.37959300570541	0.466723860163185	0.0598737727274614
CER	ADediting_403005	chr13_52421064_-	3.00249252752266e-05	0.333717816247242	0.000875429229249292	0.268937648809408	0.655930791281066	0.0366725912935797
CER	ADediting_403006	chr13_52421074_-	1.46648120780616e-05	0.345758674588633	4.38351352672887e-05	0.327151507124786	0.407080558245842	0.0681825661034666
CER	ADediting_403007	chr13_52421077_-	1.26111607762242e-06	0.383621233914609	2.95452083047681e-06	0.371019658634212	0.643273137031176	0.0381193208508279
CER	ADediting_403010	chr13_52421247_-	2.12718317370132e-08	0.437720055957098	4.66243402727611e-07	0.397714086786505	0.282778792579213	0.0882668203824979
CER	ADediting_403011	chr13_52421248_-	3.83765608988032e-09	0.457864838756749	1.17343063812923e-08	0.444866778451301	0.392670811520085	0.0702944683779849
CER	ADediting_403012	chr13_52421268_-	9.17311825114504e-14	0.560112133059925	1.42588878996318e-10	0.493270636392951	0.0186390259209108	0.191911262111998
CER	ADediting_403013	chr13_52421292_-	2.43772123596002e-05	0.337270972176709	0.000475607905743296	0.281846181512053	0.730027446946631	0.0284083613275136
CER	ADediting_403014	chr13_52421319_-	3.49692647739273e-08	0.431619020335497	1.6635102369124e-08	0.440693914044037	0.0916785282853044	0.138205548444875
CER	ADediting_403015	chr13_52421320_-	1.10632959186106e-08	0.445565332530308	1.9040302876306e-07	0.409864183673332	0.182391929259556	0.109462048681532
CER	ADediting_403028	chr13_52421659_-	0.00239514888563787	0.246144725629315	9.28104323943845e-06	0.353194375306837	0.295581096909965	0.0859629139628114
CER	ADediting_403029	chr13_52421660_-	7.70758520031968e-05	0.317070234666921	6.57755844131352e-06	0.358669592301477	0.555865768087526	0.0484682840261249
CER	ADediting_403032	chr13_52421717_-	0.00111877994464188	0.263565233694634	7.77371801982387e-05	0.316914838986383	0.90336915669219	-0.00999616528240528
CER	ADediting_403044	chr13_52421796_-	0.000183687625758912	0.300818394418486	0.0026477850376172	0.243758364088471	0.365901133581523	-0.0743455087815497
CER	ADediting_403046	chr13_52421803_-	8.17009693824598e-06	0.355233604451081	1.31786059567406e-05	0.347512401793046	0.56294861687111	-0.0476030969486784
CER	ADediting_403047	chr13_52421810_-	1.24279487075769e-08	0.444183938983802	9.7206673715083e-08	0.418679240618319	0.490886585349548	0.0566772934143823
CER	ADediting_403049	chr13_52421853_-	1.15436034873376e-05	0.34967194803626	5.31173375907477e-07	0.395904248569304	0.390255687434558	0.0706529371335735
CER	ADediting_403051	chr13_52421861_-	0.000115310597644231	0.309648557713769	0.000114022216953628	0.309858237627537	0.182105301907726	0.109533398765582
CER	ADediting_403052	chr13_52421862_-	3.69273390468207e-06	0.367629066166988	8.64977250121914e-06	0.354322804563091	0.82596537834992	-0.0181030154707944
CER	ADediting_403053	chr13_52421927_-	6.40733558178465e-07	0.393282185512739	6.47629608510654e-10	0.47749718774722	0.295442820511623	0.0859874398574772
CER	ADediting_403054	chr13_52421944_-	2.06637680730772e-07	0.408773867676851	8.59317686505306e-09	0.448545039578801	0.939219362865768	0.00627833277671918
CER	ADediting_403055	chr13_52421957_-	1.80022666129498e-07	0.410608966261487	5.15861929445113e-07	0.396311199427997	0.668418227440456	0.0352562322548245
CER	ADediting_403056	chr13_52421966_-	3.51705922181293e-05	0.330991139511111	1.16769144529379e-05	0.349485379328358	0.435123505015381	0.064195084522992
CER	ADediting_403057	chr13_52421970_-	0.000258033927391484	0.294190923911565	3.8814406918057e-05	0.329278708267019	0.816387850527043	-0.0191166942443842
CER	ADediting_403059	chr13_52421983_-	0.0013231104778908	0.259826317020035	5.99885254623138e-05	0.321591502817919	0.659939769022305	0.0362167289017154
CER	ADediting_403060	chr13_52421995_-	3.80545485961812e-07	0.400512176654342	5.06648309622915e-10	0.480111142486222	0.0709451921831288	0.147870601548752
CER	ADediting_403061	chr13_52421998_-	3.97081125199412e-11	0.505996477498901	6.86657137307195e-13	0.543213642192557	0.310404922576486	0.0833763598282048
CER	ADediting_403062	chr13_52422002_-	1.43820409781317e-14	0.574865016511036	3.50347848029372e-14	0.567867282527778	0.438765647887822	0.0636882029986992
CER	ADediting_403063	chr13_52422005_-	2.00257145233746e-07	0.409192264462867	2.88277134902445e-09	0.461106598050661	0.143851383818057	0.119911058490807
CER	ADediting_403064	chr13_52422006_-	0.000142516349222289	0.305665906269746	1.76058555795992e-05	0.342734304539631	0.366309092503314	0.0742824349763148
CER	ADediting_403066	chr13_52422087_-	1.46388754872139e-18	0.638647897162723	5.8722651849598e-15	0.581741361954434	0.00693455267276428	0.219591240616999
TCX	ADediting_403066	chr13_52422087_-	4.64679190662133e-06	0.364094703809036	0.0639115654251464	0.151672559684694	0.00517054005649722	0.227216483549268
CER	ADediting_403067	chr13_52422090_-	4.09844824767629e-14	0.566617208425372	4.01703763871555e-14	0.566777405121236	0.00775383514329844	0.216625238336079
CER	ADediting_403068	chr13_52422100_-	3.0572005233917e-09	0.460443714030067	4.6967389920696e-10	0.48091356014533	0.0161508962758281	0.196136384715405
CER	ADediting_403069	chr13_52422106_-	3.49412449493845e-10	0.484025925968495	1.37437607851959e-09	0.469345846154518	0.150940407678403	0.117843487331314
CER	ADediting_403073	chr13_52422141_-	7.58456568864141e-06	0.356416601083594	1.22441430020447e-08	0.44436124197929	0.188507072218149	0.10795901829767
CER	ADediting_403074	chr13_52422148_-	1.56040412128948e-15	0.591627750523498	4.34273312319686e-11	0.505122096568802	0.0357870019822669	0.171572445932338
CER	ADediting_403075	chr13_52422155_-	7.06148128776679e-13	0.542971863553377	1.43191566251779e-09	0.4688953311964	0.0224217403699098	0.186341094746436
CER	ADediting_403076	chr13_52422157_-	3.15754038912949e-15	0.586411528425526	1.41845062418042e-10	0.493323781212919	0.0862731643482547	0.140540928355807
CER	ADediting_403078	chr13_52422162_-	2.67876617873491e-11	0.509811354717308	1.68381191193354e-08	0.440547861994784	0.0816121184676386	0.142650605918902
CER	ADediting_403079	chr13_52422175_-	0.000257224910549072	0.294252897260502	5.22523663637604e-05	0.32405180698855	0.809010558431133	-0.019899454429467
CER	ADediting_403080	chr13_52422176_-	1.46096829695864e-10	0.493023557504447	2.52524923205083e-07	0.406085098888817	0.0564257864576376	0.156115241360858
CER	ADediting_403081	chr13_52422180_-	5.91645650000742e-10	0.47846239178183	2.84976142070102e-08	0.434145377363999	0.567990457301017	0.0469903910734795
CER	ADediting_403082	chr13_52422181_-	5.11847694995791e-09	0.454567196692034	3.9936663858885e-07	0.399849433342194	0.806797680768892	0.0201345940246064
CER	ADediting_403084	chr13_52422183_-	1.0218349895014e-06	0.38665611572834	4.13142526584642e-06	0.365907863357698	0.19176112041521	0.107173691891591
CER	ADediting_403094	chr13_52422225_-	0.000183247813872865	0.300864582237648	8.53354731951368e-05	0.315213073027032	0.392530543211074	0.0703152516536637
CER	ADediting_403095	chr13_52422229_-	0.00310084331180673	0.239952854956414	5.50951627198855e-05	0.323110293343439	0.911131351556039	-0.00918973550363448
CER	ADediting_403096	chr13_52422231_-	0.00119781887644524	0.262050187074791	8.38383683980346e-05	0.315536844632526	0.255139860834037	0.093491960330407
CER	ADediting_403097	chr13_52422235_-	3.84796222788049e-06	0.36699885919983	2.98681947117103e-06	0.370855256328878	0.0336933149053598	0.173535094405856
CER	ADediting_403098	chr13_52422236_-	2.88442124164768e-06	0.371382422511602	4.29291120699521e-08	0.42906647384752	0.0499853676892933	0.160344889090898
CER	ADediting_403101	chr13_52422244_-	0.0001100495471733	0.310518994673922	3.35837045865658e-07	0.402221342917408	0.0391757775535696	0.168592072687973
CER	ADediting_403102	chr13_52422245_-	7.91839685078711e-12	0.521332054785468	4.07121184244815e-11	0.505752867669477	0.0285153435250759	0.178874336341916
CER	ADediting_403103	chr13_52422250_-	3.3372742884606e-05	0.331898465088952	0.000788338711277391	0.271199746116815	0.521190433880823	0.052784223524964
CER	ADediting_403104	chr13_52422257_-	4.45002798859155e-13	0.546935933562845	1.56774321881929e-11	0.514928715158103	0.0396149405196786	0.168221883466867
CER	ADediting_403107	chr13_52422298_-	5.90653396511858e-09	0.452914359475559	3.20958747100979e-05	0.332571216199102	0.253998138055697	0.0937159478914497
DLPFC	ADediting_403112	chr13_52423910_-	0.47847329559364	-0.0404016485559756	0.0339512228675196	-0.12049246480533	6.98079789088168e-08	0.300340598191827
DLPFC	ADediting_403120	chr13_52423986_-	0.754069220555284	-0.0178637581935932	0.0329226643997447	-0.121190398098242	1.74905710697874e-12	0.386480921895306
DLPFC	ADediting_403122	chr13_52423996_-	0.68641301792525	0.0230201454263574	0.0729789444400579	-0.101979749342054	4.32935877720621e-17	0.45298025121003
DLPFC	ADediting_403131	chr13_52424038_-	0.510899726470821	0.0374782157982473	0.0982434932769458	-0.094080150593889	2.8618259444396e-24	0.534180847099163
DLPFC	ADediting_403132	chr13_52424039_-	0.282512062499831	0.0612285412774886	0.16768869100174	-0.0785561193807092	8.77389970552118e-22	0.508440588587252
DLPFC	ADediting_403135	chr13_52424067_-	0.564054226448096	0.0328857364259683	0.242079807802303	-0.0666357315923709	1.2266431780858e-10	0.354999744585895
DLPFC	ADediting_403136	chr13_52424068_-	0.729879426574308	0.0196885586360516	0.117215219926632	-0.0891580987756637	1.54089115787039e-11	0.370791264419243
DLPFC	ADediting_403137	chr13_52424073_-	0.82557908839683	0.0125667330837653	0.18537903900305	-0.0754168617228981	4.32286436058755e-12	0.380058118276226
CER	ADediting_403141	chr13_52424102_-	0.000677621208594042	0.274433038676904	0.000151557788744859	0.304498712820868	0.613969894027094	-0.0415148267494195
CER	ADediting_403143	chr13_52424132_-	0.00255389046510541	0.244620195893977	7.29456524130769e-05	0.318069933340042	0.668583980852257	-0.0352375023220229
DLPFC	ADediting_403145	chr13_52424141_-	0.238855697898209	-0.0670931224763723	0.0011135193388049	-0.184319896071271	2.50338350877511e-08	0.309950320665718
CER	ADediting_403145	chr13_52424141_-	0.000533890741933245	0.279447909177466	2.69553805101592e-05	0.335562162772872	0.808389990483564	0.0199653794651911
DLPFC	ADediting_403146	chr13_52424149_-	0.968571216593064	0.0022468623500022	0.0724211653494426	-0.102177726150804	2.77527410803826e-08	0.308999638929616
CER	ADediting_403146	chr13_52424149_-	7.25689818392448e-05	0.31816372429441	4.01224842204732e-06	0.366357625056898	0.151697255176928	0.117627112662238
DLPFC	ADediting_403168	chr13_52425084_-	0.60479509087519	0.0295058036123407	0.191873966545855	-0.0743198578428735	3.020649919029e-08	0.308215933755859
CER	ADediting_403168	chr13_52425084_-	0.000561877234187262	0.27838104203896	7.80690908363239e-06	0.355957524066433	0.113793115375365	0.129657446093607
CER	ADediting_403169	chr13_52425090_-	0.000307239818504456	0.290724152902439	2.62430604522558e-05	0.336018358009986	0.898394369600784	-0.0105135004972506
DLPFC	ADediting_403173	chr13_52425141_-	0.312147107707542	0.0575904304951685	0.275142324999019	-0.0621726731383849	1.07094735235698e-09	0.337516280574853
DLPFC	ADediting_403176	chr13_52425201_-	0.184359296162351	0.0755916527230714	0.594913415338097	-0.0303157272088472	1.32519821999932e-08	0.315742185954079

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	3.80032606881855e-98	0.873188351309298	5.41687871089812e-96	0.868729744155899	0.00633751059435594	0.154731791806534
AC	3.48911130781859e-107	0.926394160142896	4.65053082208243e-78	0.869828956801103	5.09672550970055e-12	0.418472361917815
PCC	3.05786367498154e-75	0.912384140611294	1.67945502365501e-85	0.932458225779387	0.0253178487324514	0.161822913651071
CER	1.36180781918993e-40	0.837022008127331	8.62087022158291e-24	0.704380471281649	0.391201522770899	0.0705123916082549
TCX	2.93768849384795e-48	0.874075636788911	2.22731457489591e-33	0.790914184034383	0.963666999499034	-0.00375070227336722
FP	2.59327547268197e-27	0.697937483730588	1.11350789489162e-39	0.792704538216814	0.115241156053593	0.118474721334906
IFG	6.61317205748831e-08	0.851842534689222	3.89063654483891e-06	0.782017549202372	0.411225841696903	0.171920386080218
PG	1.53752521765457e-61	0.88046080082605	1.54933062147103e-45	0.815323184019143	0.236050687619439	-0.0873047993991417
STG	1.4283703018901e-16	0.753061485715878	7.64356286314383e-21	0.811685694024222	0.939326059269361	0.00843122601222504

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Relation with AD stages for VPS36

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
CER	ADediting_402860	chr13_52417457_-	0.00125542192086953	0.306480570436446
CER	ADediting_402879	chr13_52417627_-	0.00136514703401838	0.304304589821403
CER	ADediting_402881	chr13_52417633_-	0.000940521957106026	0.313856944336652
CER	ADediting_402886	chr13_52418332_-	0.000624723949885659	0.323996472283309
CER	ADediting_402905	chr13_52419799_-	3.92261866910833e-06	0.427577638465053
CER	ADediting_402909	chr13_52419830_-	2.19280883013765e-05	0.396176420008509
CER	ADediting_402912	chr13_52419875_-	0.00108581125721112	0.310211394254567
CER	ADediting_402973	chr13_52420732_-	0.000945182266021073	0.313732262755083
CER	ADediting_403004	chr13_52421059_-	0.00111266712309185	0.309586740746073
CER	ADediting_403060	chr13_52421995_-	0.000107855303861291	0.363974028378906
CER	ADediting_403061	chr13_52421998_-	0.000357551378774398	0.337285690559453
CER	ADediting_403062	chr13_52422002_-	0.0015661125661572	0.300702021717549
CER	ADediting_403066	chr13_52422087_-	2.73218234600179e-05	0.391925883541325
CER	ADediting_403067	chr13_52422090_-	0.000174000987945739	0.353605214438018
CER	ADediting_403068	chr13_52422100_-	0.000868755807035972	0.3158518289839
CER	ADediting_403073	chr13_52422141_-	0.00159509917318577	0.300217488113627
CER	ADediting_403074	chr13_52422148_-	0.000356316185074592	0.337366271146322
CER	ADediting_403075	chr13_52422155_-	6.77680620844893e-06	0.417939345342633
CER	ADediting_403076	chr13_52422157_-	1.15633035690259e-05	0.408224254112044
CER	ADediting_403078	chr13_52422162_-	1.07481695948387e-05	0.409571332214011
CER	ADediting_403095	chr13_52422229_-	0.00101085478167499	0.312032473886387
TCX	ADediting_403066	chr13_52422087_-	0.000924171291196209	0.317164150869623
IFG	ADediting_402919	chr13_52420015_-	0.0354713369979928	0.422303326441651
IFG	ADediting_402920	chr13_52420049_-	0.0354713369979928	0.422303326441651
IFG	ADediting_402961	chr13_52420575_-	0.0354713369979928	0.422303326441651
IFG	ADediting_402962	chr13_52420579_-	0.0354713369979928	0.422303326441651

Correlation between AD stages and this gene's expression

Tissue

P-val

Coeff.

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RelatedDrugs for VPS36

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for VPS36

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Gene summary for VPS36

RNA A-to-I events for VPS36

RNA editing positional annotations for VPS36 using Annovar

RNA A-to-I editing events in the alternative splicing sites for VPS36

Differntial gene expression between RNA A-to-I edited versus non-edited samples for VPS36

Protein coding region RNA A-to-I editings for VPS36

The effects of the RNA editing to the miRNA binding sites for VPS36

The effects of the RNA editing to the stability of the RNA structures for VPS36

Relation with ADAR for VPS36

Relation with AD stages for VPS36

RelatedDrugs for VPS36

RelatedDiseases for VPS36

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene