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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for HCG11 |
 Gene summary |
| Gene information | Gene symbol | HCG11 | Gene ID | 493812 |
| Gene name | HLA complex group 11 | |
| Synonyms | CTA-14H9.3|bK14H9.3 | |
| Cytomap | 6p22.2 | |
| Type of gene | ncRNA | |
| Description | HLA complex group 11 (non-protein coding) | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for HCG11 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1253581(26525384, +), ADediting_1253582(26525385, +), ADediting_1253583(26525415, +), ADediting_1253584(26525424, +), ADediting_1253585(26525429, +), ADediting_1253586(26525451, +), ADediting_1253587(26525452, +), ADediting_1253588(26525491, +), ADediting_1253589(26525527, +), ADediting_1253590(26525544, +), ADediting_1253591(26525582, +), ADediting_1253592(26525583, +), ADediting_1253593(26526353, +), |
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RNA editing positional annotations for HCG11 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1253581 | chr6_26525384_+ | ncRNA_exonic |
| ADediting_1253582 | chr6_26525385_+ | ncRNA_exonic |
| ADediting_1253583 | chr6_26525415_+ | ncRNA_exonic |
| ADediting_1253584 | chr6_26525424_+ | ncRNA_exonic |
| ADediting_1253585 | chr6_26525429_+ | ncRNA_exonic |
| ADediting_1253586 | chr6_26525451_+ | ncRNA_exonic |
| ADediting_1253587 | chr6_26525452_+ | ncRNA_exonic |
| ADediting_1253588 | chr6_26525491_+ | ncRNA_exonic |
| ADediting_1253589 | chr6_26525527_+ | ncRNA_exonic |
| ADediting_1253590 | chr6_26525544_+ | ncRNA_exonic |
| ADediting_1253591 | chr6_26525582_+ | ncRNA_exonic |
| ADediting_1253592 | chr6_26525583_+ | ncRNA_exonic |
| ADediting_1253593 | chr6_26526353_+ | ncRNA_exonic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1253581 | chr6_26525384_+ | SINE | Alu | Name=AluSc |
| ADediting_1253582 | chr6_26525385_+ | SINE | Alu | Name=AluSc |
| ADediting_1253583 | chr6_26525415_+ | SINE | Alu | Name=AluSc |
| ADediting_1253584 | chr6_26525424_+ | SINE | Alu | Name=AluSc |
| ADediting_1253585 | chr6_26525429_+ | SINE | Alu | Name=AluSc |
| ADediting_1253586 | chr6_26525451_+ | SINE | Alu | Name=AluSc |
| ADediting_1253587 | chr6_26525452_+ | SINE | Alu | Name=AluSc |
| ADediting_1253588 | chr6_26525491_+ | SINE | Alu | Name=AluSc |
| ADediting_1253589 | chr6_26525527_+ | SINE | Alu | Name=AluSc |
| ADediting_1253590 | chr6_26525544_+ | SINE | Alu | Name=AluSc |
| ADediting_1253591 | chr6_26525582_+ | SINE | Alu | Name=AluSc |
| ADediting_1253592 | chr6_26525583_+ | SINE | Alu | Name=AluSc |
| ADediting_1253593 | chr6_26526353_+ | SINE | Alu | Name=AluSc |
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RNA A-to-I editing events in the alternative splicing sites for HCG11 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HCG11 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for HCG11 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for HCG11 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1253581 | chr6_26525384_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-513a-5p | chr6 | 26525379 | 26525385 | 7mer-m8 | 26525369 | 26525386 | 148 | -20.07 |
| ADediting_1253582 | chr6_26525385_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4759 | chr6 | 26525383 | 26525389 | 7mer-m8 | 26525370 | 26525390 | 145 | -14.41 |
| ADediting_1253584 | chr6_26525424_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-6790-3p | chr6 | 26525421 | 26525428 | 8mer-1a | 26525408 | 26525428 | 147 | -20.4 |
| ADediting_1253585 | chr6_26525429_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4732-3p | chr6 | 26525425 | 26525431 | 7mer-m8 | 26525414 | 26525432 | 151 | -20.02 |
| ADediting_1253587 | chr6_26525452_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-3190-5p | chr6 | 26525446 | 26525452 | 7mer-m8 | 26525434 | 26525453 | 151 | -17.15 |
| ADediting_1253589 | chr6_26525527_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-1207-3p | chr6 | 26525521 | 26525527 | 7mer-m8 | 26525510 | 26525528 | 145 | -13.53 |
| ADediting_1253589 | chr6_26525527_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-646 | chr6 | 26525523 | 26525529 | 7mer-m8 | 26525511 | 26525530 | 148 | -21.05 |
| ADediting_1253591 | chr6_26525582_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-1304-3p | chr6 | 26525578 | 26525584 | 7mer-m8 | 26525564 | 26525585 | 167 | -27.41 |
| ADediting_1253591 | chr6_26525582_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4284 | chr6 | 26525580 | 26525586 | 7mer-m8 | 26525570 | 26525587 | 151 | -15.7 |
| ADediting_1253592 | chr6_26525583_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-24-1-5p | chr6 | 26525579 | 26525585 | 7mer-m8 | 26525564 | 26525586 | 154 | -20.83 |
| ADediting_1253592 | chr6_26525583_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-24-2-5p | chr6 | 26525579 | 26525585 | 7mer-m8 | 26525564 | 26525586 | 148 | -17.66 |
| ADediting_1253593 | chr6_26526353_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4707-3p | chr6 | 26526350 | 26526357 | 8mer-1a | 26526336 | 26526357 | 162 | -27.57 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1253581 | chr6_26525384_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-10399-5p | chr6 | 26525380 | 26525386 | 7mer-m8 | 26525366 | 26525387 | 148 | -11.2 |
| ADediting_1253581 | chr6_26525384_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-6504-3p | chr6 | 26525380 | 26525386 | 7mer-m8 | 26525366 | 26525387 | 153 | -14.35 |
| ADediting_1253582 | chr6_26525385_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-10399-5p | chr6 | 26525380 | 26525386 | 7mer-m8 | 26525366 | 26525387 | 148 | -11.2 |
| ADediting_1253582 | chr6_26525385_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-6504-3p | chr6 | 26525380 | 26525386 | 7mer-m8 | 26525366 | 26525387 | 153 | -14.35 |
| ADediting_1253585 | chr6_26525429_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-10397-5p | chr6 | 26525425 | 26525431 | 7mer-m8 | 26525411 | 26525432 | 150 | -19.55 |
| ADediting_1253585 | chr6_26525429_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4780 | chr6 | 26525426 | 26525433 | 8mer-1a | 26525408 | 26525433 | 154 | -21.29 |
| ADediting_1253585 | chr6_26525429_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-623 | chr6 | 26525427 | 26525433 | 7mer-m8 | 26525412 | 26525434 | 140 | -17.32 |
| ADediting_1253585 | chr6_26525429_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-6866-3p | chr6 | 26525428 | 26525434 | 7mer-m8 | 26525413 | 26525435 | 155 | -17.25 |
| ADediting_1253586 | chr6_26525451_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4781-3p | chr6 | 26525449 | 26525455 | 7mer-m8 | 26525438 | 26525456 | 144 | -12.49 |
| ADediting_1253586 | chr6_26525451_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-548s | chr6 | 26525445 | 26525452 | 8mer-1a | 26525430 | 26525452 | 142 | -11.05 |
| ADediting_1253587 | chr6_26525452_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4716-5p | chr6 | 26525451 | 26525457 | 7mer-m8 | 26525437 | 26525458 | 140 | -10.98 |
| ADediting_1253587 | chr6_26525452_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4781-3p | chr6 | 26525449 | 26525455 | 7mer-m8 | 26525438 | 26525456 | 144 | -12.49 |
| ADediting_1253588 | chr6_26525491_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4735-5p | chr6 | 26525486 | 26525492 | 7mer-m8 | 26525472 | 26525493 | 140 | -4.7 |
| ADediting_1253590 | chr6_26525544_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-1976 | chr6 | 26525542 | 26525549 | 8mer-1a | 26525529 | 26525549 | 149 | -24.39 |
| ADediting_1253590 | chr6_26525544_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-6747-3p | chr6 | 26525540 | 26525547 | 8mer-1a | 26525525 | 26525547 | 149 | -23.68 |
| ADediting_1253593 | chr6_26526353_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-6747-3p | chr6 | 26526349 | 26526355 | 7mer-m8 | 26526335 | 26526356 | 150 | -22.22 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-589-3p | chr6 | 26523745 | 26523751 | 7mer-m8 | 26523729 | 26523752 | 154 | -16.08 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-641 | chr6 | 26525991 | 26525998 | 8mer-1a | 26525976 | 26525998 | 151 | -15.04 |
| ADediting_291761 | chr11_93733708_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-1304-3p | chr6 | 26523096 | 26523102 | 7mer-m8 | 26523082 | 26523103 | 157 | -20.09 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4775 | chr6 | 26527174 | 26527180 | 7mer-m8 | 26527162 | 26527181 | 148 | -8.77 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4775 | chr6 | 26527390 | 26527396 | 7mer-m8 | 26527376 | 26527397 | 168 | -8.1 |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-5581-3p | chr6 | 26522125 | 26522131 | 7mer-m8 | 26522113 | 26522132 | 148 | -21.27 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-5688 | chr6 | 26522701 | 26522707 | 7mer-m8 | 26522687 | 26522708 | 140 | -8.45 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-337-3p | chr6 | 26526832 | 26526839 | 8mer-1a | 26526817 | 26526839 | 146 | -11.45 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-641 | chr6 | 26522636 | 26522642 | 7mer-m8 | 26522621 | 26522643 | 143 | -8.67 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-641 | chr6 | 26522636 | 26522642 | 7mer-m8 | 26522621 | 26522643 | 143 | -8.67 |
| ADediting_496066 | chr15_66496985_- | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4512 | chr6 | 26521778 | 26521784 | 7mer-m8 | 26521768 | 26521785 | 143 | -22.51 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-1273h-3p | chr6 | 26524948 | 26524954 | 7mer-m8 | 26524934 | 26524955 | 140 | -11.56 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-4775 | chr6 | 26522917 | 26522923 | 7mer-m8 | 26522900 | 26522924 | 151 | -14.33 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-5585-3p | chr6 | 26525274 | 26525280 | 7mer-1a | 26525260 | 26525280 | 141 | -10.23 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-5585-3p | chr6 | 26525788 | 26525794 | 7mer-m8 | 26525775 | 26525795 | 152 | -11.09 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-5585-3p | chr6 | 26525274 | 26525280 | 7mer-1a | 26525260 | 26525280 | 141 | -10.23 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000228223.3 | ENST00000411553.3 | HCG11-201 | hsa-miR-5585-3p | chr6 | 26525788 | 26525794 | 7mer-m8 | 26525775 | 26525795 | 152 | -11.09 |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for HCG11 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000411553.3 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1253581 | ENST00000411553.3 | chr6_26525384_+ | 3676 | -1769.00 | -1768.30 | -1786.50 |
| ADediting_1253582 | ENST00000411553.3 | chr6_26525385_+ | 3677 | -1767.00 | -1768.30 | -1786.50 |
| ADediting_1253583 | ENST00000411553.3 | chr6_26525415_+ | 3707 | -1770.50 | -1768.30 | -1786.50 |
| ADediting_1253584 | ENST00000411553.3 | chr6_26525424_+ | 3716 | -1770.60 | -1768.30 | -1786.50 |
| ADediting_1253585 | ENST00000411553.3 | chr6_26525429_+ | 3721 | -1768.40 | -1768.30 | -1786.50 |
| ADediting_1253586 | ENST00000411553.3 | chr6_26525451_+ | 3743 | -1771.40 | -1768.30 | -1786.50 |
| ADediting_1253587 | ENST00000411553.3 | chr6_26525452_+ | 3744 | -1768.00 | -1768.30 | -1786.50 |
| ADediting_1253588 | ENST00000411553.3 | chr6_26525491_+ | 3783 | -1768.00 | -1768.30 | -1786.50 |
| ADediting_1253589 | ENST00000411553.3 | chr6_26525527_+ | 3819 | -1770.00 | -1768.30 | -1786.50 |
| ADediting_1253590 | ENST00000411553.3 | chr6_26525544_+ | 3836 | -1772.40 | -1768.30 | -1786.50 |
| ADediting_1253591 | ENST00000411553.3 | chr6_26525582_+ | 3874 | -1773.20 | -1768.30 | -1786.50 |
| ADediting_1253592 | ENST00000411553.3 | chr6_26525583_+ | 3875 | -1769.50 | -1768.30 | -1786.50 |
| ADediting_1253593 | ENST00000411553.3 | chr6_26526353_+ | 4645 | -1769.50 | -1768.30 | -1786.50 |
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Relation with ADAR for HCG11 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1253591 | chr6_26525582_+ | 0.0249784900131696 | 0.127317770653346 | 0.702117265299931 | 0.0218080079044833 | 5.59019455836656e-10 | 0.342876366227632 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.02730438892741e-25 | 0.54818635039763 | 2.15464993592434e-11 | 0.368296925493999 | 5.57785782186392e-39 | 0.652468692855675 |
| AC | 5.51738914253248e-61 | 0.816067373901164 | 6.63911013188529e-32 | 0.654065723564423 | 9.68300038116971e-29 | 0.627199191199945 |
| PCC | 8.67206378826589e-31 | 0.711571862689611 | 9.50218755535686e-27 | 0.674958091595256 | 2.23440535383327e-07 | 0.364161107518905 |
| CER | 2.94199828571558e-31 | 0.774667745416113 | 6.06631329182779e-12 | 0.523794059150964 | 0.017438180280817 | 0.193884984447802 |
| TCX | 6.57996936651383e-31 | 0.771852313145979 | 4.66644221960145e-16 | 0.600348421278167 | 0.0452283201720317 | 0.163769828328727 |
| FP | 4.35623946220845e-18 | 0.590172690187803 | 3.15412815148779e-20 | 0.6192489484706 | 0.000172575057169671 | 0.277923436332377 |
| IFG | 2.72461175958537e-05 | 0.736225907395856 | 5.18642350802804e-06 | 0.775860853990359 | 0.485305930971848 | 0.146294879856046 |
| PG | 1.33762868039844e-42 | 0.799539249406401 | 1.62560770289895e-21 | 0.62461080998636 | 0.556141747995092 | 0.0434293231018289 |
| STG | 3.72675312837643e-09 | 0.589201282814841 | 8.16141035372148e-09 | 0.578646011199659 | 0.0407666331741725 | 0.223739607945003 |
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Relation with AD stages for HCG11 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 4.01370560661183e-07 | 0.468793369572712 |
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RelatedDrugs for HCG11 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for HCG11 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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