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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TMEM198B |
 Gene summary |
| Gene information | Gene symbol | TMEM198B | Gene ID | 440104 |
| Gene name | transmembrane protein 198B (pseudogene) | |
| Synonyms | - | |
| Cytomap | 12q13.2 | |
| Type of gene | pseudo | |
| Description | 1110012D08Rik pseudogenetransmembrane protein 198, pseudogene | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for TMEM198B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_356921(55833818, +), ADediting_356922(55833828, +), ADediting_356923(55833834, +), ADediting_356924(55833836, +), ADediting_356925(55833837, +), ADediting_356926(55833842, +), ADediting_356927(55833845, +), ADediting_356928(55833858, +), ADediting_356929(55833859, +), ADediting_356930(55833880, +), ADediting_356931(55833903, +), ADediting_356932(55833904, +), ADediting_356933(55833912, +), ADediting_356934(55833914, +), ADediting_356935(55833928, +), ADediting_356936(55833979, +), ADediting_356937(55833989, +), ADediting_356938(55834002, +), ADediting_356939(55834006, +), ADediting_356940(55834020, +), ADediting_356941(55834021, +), ADediting_356942(55834050, +), ADediting_356943(55834065, +), ADediting_356944(55834082, +), ADediting_356945(55834295, +), ADediting_356946(55834303, +), ADediting_356947(55834317, +), ADediting_356948(55834325, +), ADediting_356949(55834338, +), ADediting_356950(55834363, +), ADediting_356951(55834364, +), ADediting_356952(55834368, +), ADediting_356953(55834374, +), ADediting_356954(55834381, +), ADediting_356955(55834393, +), ADediting_356956(55834403, +), ADediting_356957(55834429, +), ADediting_356958(55834438, +), ADediting_356959(55834444, +), ADediting_356960(55834447, +), ADediting_356961(55834461, +), ADediting_356962(55834464, +), ADediting_356963(55834469, +), ADediting_356964(55834473, +), ADediting_356965(55834492, +), ADediting_356966(55834507, +), ADediting_356967(55834511, +), ADediting_356968(55834516, +), ADediting_356969(55834525, +), ADediting_356970(55834526, +), ADediting_356971(55834538, +), ADediting_356972(55834540, +), ADediting_356973(55834541, +), ADediting_356974(55834823, +), ADediting_1533251(55833900, +), ADediting_1533252(55833925, +), ADediting_1533253(55833931, +), ADediting_1533254(55835061, +), |
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RNA editing positional annotations for TMEM198B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_356921 | chr12_55833818_+ | ncRNA_intronic |
| ADediting_356922 | chr12_55833828_+ | ncRNA_intronic |
| ADediting_356923 | chr12_55833834_+ | ncRNA_intronic |
| ADediting_356924 | chr12_55833836_+ | ncRNA_intronic |
| ADediting_356925 | chr12_55833837_+ | ncRNA_intronic |
| ADediting_356926 | chr12_55833842_+ | ncRNA_intronic |
| ADediting_356927 | chr12_55833845_+ | ncRNA_intronic |
| ADediting_356928 | chr12_55833858_+ | ncRNA_intronic |
| ADediting_356929 | chr12_55833859_+ | ncRNA_intronic |
| ADediting_356930 | chr12_55833880_+ | ncRNA_intronic |
| ADediting_356931 | chr12_55833903_+ | ncRNA_intronic |
| ADediting_356932 | chr12_55833904_+ | ncRNA_intronic |
| ADediting_356933 | chr12_55833912_+ | ncRNA_intronic |
| ADediting_356934 | chr12_55833914_+ | ncRNA_intronic |
| ADediting_356935 | chr12_55833928_+ | ncRNA_intronic |
| ADediting_356936 | chr12_55833979_+ | ncRNA_intronic |
| ADediting_356937 | chr12_55833989_+ | ncRNA_intronic |
| ADediting_356938 | chr12_55834002_+ | ncRNA_intronic |
| ADediting_356939 | chr12_55834006_+ | ncRNA_intronic |
| ADediting_356940 | chr12_55834020_+ | ncRNA_intronic |
| ADediting_356941 | chr12_55834021_+ | ncRNA_intronic |
| ADediting_356942 | chr12_55834050_+ | ncRNA_intronic |
| ADediting_356943 | chr12_55834065_+ | ncRNA_intronic |
| ADediting_356944 | chr12_55834082_+ | ncRNA_intronic |
| ADediting_356945 | chr12_55834295_+ | ncRNA_exonic |
| ADediting_356946 | chr12_55834303_+ | ncRNA_exonic |
| ADediting_356947 | chr12_55834317_+ | ncRNA_exonic |
| ADediting_356948 | chr12_55834325_+ | ncRNA_exonic |
| ADediting_356949 | chr12_55834338_+ | ncRNA_exonic |
| ADediting_356950 | chr12_55834363_+ | ncRNA_intronic |
| ADediting_356951 | chr12_55834364_+ | ncRNA_intronic |
| ADediting_356952 | chr12_55834368_+ | ncRNA_intronic |
| ADediting_356953 | chr12_55834374_+ | ncRNA_intronic |
| ADediting_356954 | chr12_55834381_+ | ncRNA_intronic |
| ADediting_356955 | chr12_55834393_+ | ncRNA_intronic |
| ADediting_356956 | chr12_55834403_+ | ncRNA_intronic |
| ADediting_356957 | chr12_55834429_+ | ncRNA_intronic |
| ADediting_356958 | chr12_55834438_+ | ncRNA_intronic |
| ADediting_356959 | chr12_55834444_+ | ncRNA_intronic |
| ADediting_356960 | chr12_55834447_+ | ncRNA_intronic |
| ADediting_356961 | chr12_55834461_+ | ncRNA_intronic |
| ADediting_356962 | chr12_55834464_+ | ncRNA_intronic |
| ADediting_356963 | chr12_55834469_+ | ncRNA_intronic |
| ADediting_356964 | chr12_55834473_+ | ncRNA_intronic |
| ADediting_356965 | chr12_55834492_+ | ncRNA_intronic |
| ADediting_356966 | chr12_55834507_+ | ncRNA_intronic |
| ADediting_356967 | chr12_55834511_+ | ncRNA_intronic |
| ADediting_356968 | chr12_55834516_+ | ncRNA_intronic |
| ADediting_356969 | chr12_55834525_+ | ncRNA_intronic |
| ADediting_356970 | chr12_55834526_+ | ncRNA_intronic |
| ADediting_356971 | chr12_55834538_+ | ncRNA_intronic |
| ADediting_356972 | chr12_55834540_+ | ncRNA_intronic |
| ADediting_356973 | chr12_55834541_+ | ncRNA_intronic |
| ADediting_356974 | chr12_55834823_+ | ncRNA_intronic |
| ADediting_1533251 | chr12_55833900_+ | ncRNA_intronic |
| ADediting_1533252 | chr12_55833925_+ | ncRNA_intronic |
| ADediting_1533253 | chr12_55833931_+ | ncRNA_intronic |
| ADediting_1533254 | chr12_55835061_+ | ncRNA_exonic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_356921 | chr12_55833818_+ | SINE | Alu | Name=AluY |
| ADediting_356922 | chr12_55833828_+ | SINE | Alu | Name=AluY |
| ADediting_356923 | chr12_55833834_+ | SINE | Alu | Name=AluY |
| ADediting_356924 | chr12_55833836_+ | SINE | Alu | Name=AluY |
| ADediting_356925 | chr12_55833837_+ | SINE | Alu | Name=AluY |
| ADediting_356926 | chr12_55833842_+ | SINE | Alu | Name=AluY |
| ADediting_356927 | chr12_55833845_+ | SINE | Alu | Name=AluY |
| ADediting_356928 | chr12_55833858_+ | SINE | Alu | Name=AluY |
| ADediting_356929 | chr12_55833859_+ | SINE | Alu | Name=AluY |
| ADediting_356930 | chr12_55833880_+ | SINE | Alu | Name=AluY |
| ADediting_356931 | chr12_55833903_+ | SINE | Alu | Name=AluY |
| ADediting_356932 | chr12_55833904_+ | SINE | Alu | Name=AluY |
| ADediting_356933 | chr12_55833912_+ | SINE | Alu | Name=AluY |
| ADediting_356934 | chr12_55833914_+ | SINE | Alu | Name=AluY |
| ADediting_356935 | chr12_55833928_+ | SINE | Alu | Name=AluY |
| ADediting_356936 | chr12_55833979_+ | SINE | Alu | Name=AluY |
| ADediting_356937 | chr12_55833989_+ | SINE | Alu | Name=AluY |
| ADediting_356938 | chr12_55834002_+ | SINE | Alu | Name=AluY |
| ADediting_356939 | chr12_55834006_+ | SINE | Alu | Name=AluY |
| ADediting_356940 | chr12_55834020_+ | SINE | Alu | Name=AluY |
| ADediting_356941 | chr12_55834021_+ | SINE | Alu | Name=AluY |
| ADediting_356942 | chr12_55834050_+ | SINE | Alu | Name=AluY |
| ADediting_356943 | chr12_55834065_+ | SINE | Alu | Name=AluY |
| ADediting_356944 | chr12_55834082_+ | SINE | Alu | Name=AluY |
| ADediting_356945 | chr12_55834295_+ | SINE | Alu | Name=AluSz |
| ADediting_356946 | chr12_55834303_+ | SINE | Alu | Name=AluSz |
| ADediting_356947 | chr12_55834317_+ | SINE | Alu | Name=AluSz |
| ADediting_356948 | chr12_55834325_+ | SINE | Alu | Name=AluSz |
| ADediting_356949 | chr12_55834338_+ | SINE | Alu | Name=AluSz |
| ADediting_356950 | chr12_55834363_+ | SINE | Alu | Name=AluSz |
| ADediting_356951 | chr12_55834364_+ | SINE | Alu | Name=AluSz |
| ADediting_356952 | chr12_55834368_+ | SINE | Alu | Name=AluSz |
| ADediting_356953 | chr12_55834374_+ | SINE | Alu | Name=AluSz |
| ADediting_356954 | chr12_55834381_+ | SINE | Alu | Name=AluSz |
| ADediting_356955 | chr12_55834393_+ | SINE | Alu | Name=AluSz |
| ADediting_356956 | chr12_55834403_+ | SINE | Alu | Name=AluSz |
| ADediting_356957 | chr12_55834429_+ | SINE | Alu | Name=AluSz |
| ADediting_356958 | chr12_55834438_+ | SINE | Alu | Name=AluSz |
| ADediting_356959 | chr12_55834444_+ | SINE | Alu | Name=AluSz |
| ADediting_356960 | chr12_55834447_+ | SINE | Alu | Name=AluSz |
| ADediting_356961 | chr12_55834461_+ | SINE | Alu | Name=AluSz |
| ADediting_356962 | chr12_55834464_+ | SINE | Alu | Name=AluSz |
| ADediting_356963 | chr12_55834469_+ | SINE | Alu | Name=AluSz |
| ADediting_356964 | chr12_55834473_+ | SINE | Alu | Name=AluSz |
| ADediting_356965 | chr12_55834492_+ | SINE | Alu | Name=AluSz |
| ADediting_356966 | chr12_55834507_+ | SINE | Alu | Name=AluSz |
| ADediting_356967 | chr12_55834511_+ | SINE | Alu | Name=AluSz |
| ADediting_356968 | chr12_55834516_+ | SINE | Alu | Name=AluSz |
| ADediting_356969 | chr12_55834525_+ | SINE | Alu | Name=AluSz |
| ADediting_356970 | chr12_55834526_+ | SINE | Alu | Name=AluSz |
| ADediting_356971 | chr12_55834538_+ | SINE | Alu | Name=AluSz |
| ADediting_356972 | chr12_55834540_+ | SINE | Alu | Name=AluSz |
| ADediting_356973 | chr12_55834541_+ | SINE | Alu | Name=AluSz |
| ADediting_1533251 | chr12_55833900_+ | SINE | Alu | Name=AluY |
| ADediting_1533252 | chr12_55833925_+ | SINE | Alu | Name=AluY |
| ADediting_1533253 | chr12_55833931_+ | SINE | Alu | Name=AluY |
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RNA A-to-I editing events in the alternative splicing sites for TMEM198B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM198B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for TMEM198B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for TMEM198B |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1533254 | chr12_55835061_+ | ENSG00000182796.14 | ENST00000471276.5 | TMEM198B-201 | hsa-miR-4281 | chr12 | 55835060 | 55835066 | 7mer-m8 | 55835050 | 55835067 | 147 | -24.03 |
| ADediting_1533254 | chr12_55835061_+ | ENSG00000182796.14 | ENST00000478241.6 | TMEM198B-202 | hsa-miR-4281 | chr12 | 55835060 | 55835066 | 7mer-m8 | 55835050 | 55835067 | 147 | -24.03 |
| ADediting_1533254 | chr12_55835061_+ | ENSG00000182796.14 | ENST00000482378.6 | TMEM198B-203 | hsa-miR-4281 | chr12 | 55835060 | 55835066 | 7mer-m8 | 55835050 | 55835067 | 147 | -24.03 |
| ADediting_1533254 | chr12_55835061_+ | ENSG00000182796.14 | ENST00000487582.1 | TMEM198B-205 | hsa-miR-4281 | chr12 | 55835060 | 55835066 | 7mer-m8 | 55835050 | 55835067 | 147 | -24.03 |
| ADediting_1533254 | chr12_55835061_+ | ENSG00000182796.14 | ENST00000508246.6 | TMEM198B-206 | hsa-miR-4281 | chr12 | 55835060 | 55835066 | 7mer-m8 | 55835050 | 55835067 | 147 | -24.03 |
| ADediting_1533254 | chr12_55835061_+ | ENSG00000182796.14 | ENST00000636428.1 | TMEM198B-209 | hsa-miR-4281 | chr12 | 55835060 | 55835066 | 7mer-m8 | 55835050 | 55835067 | 147 | -24.03 |
| ADediting_356947 | chr12_55834317_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-4793-3p | chr12 | 55834314 | 55834320 | 7mer-m8 | 55834299 | 55834321 | 154 | -22.82 |
| ADediting_356947 | chr12_55834317_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-7703 | chr12 | 55834313 | 55834319 | 7mer-m8 | 55834298 | 55834320 | 154 | -20.16 |
| ADediting_356947 | chr12_55834317_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-4793-3p | chr12 | 55834314 | 55834320 | 7mer-m8 | 55834299 | 55834321 | 154 | -22.82 |
| ADediting_356947 | chr12_55834317_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-7703 | chr12 | 55834313 | 55834319 | 7mer-m8 | 55834298 | 55834320 | 154 | -20.16 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-3672 | chr12 | 55834289 | 55834295 | 7mer-m8 | 55833530 | 55834296 | 146 | -13.25 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-5586-3p | chr12 | 55834293 | 55834299 | 7mer-m8 | 55833534 | 55834300 | 146 | -14.33 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-6864-3p | chr12 | 55834289 | 55834295 | 7mer-m8 | 55833532 | 55834296 | 147 | -17.44 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-759 | chr12 | 55834294 | 55834300 | 7mer-m8 | 55833538 | 55834301 | 143 | -12.38 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-3672 | chr12 | 55834289 | 55834295 | 7mer-m8 | 55833530 | 55834296 | 146 | -13.25 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-5586-3p | chr12 | 55834293 | 55834299 | 7mer-m8 | 55833534 | 55834300 | 146 | -14.33 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-6864-3p | chr12 | 55834289 | 55834295 | 7mer-m8 | 55833532 | 55834296 | 147 | -17.44 |
| ADediting_356945 | chr12_55834295_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-759 | chr12 | 55834294 | 55834300 | 7mer-m8 | 55833538 | 55834301 | 143 | -12.38 |
| ADediting_356946 | chr12_55834303_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-1262 | chr12 | 55834301 | 55834307 | 7mer-m8 | 55834286 | 55834308 | 144 | -16.78 |
| ADediting_356946 | chr12_55834303_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-6736-5p | chr12 | 55834301 | 55834307 | 7mer-m8 | 55834288 | 55834308 | 143 | -16.1 |
| ADediting_356946 | chr12_55834303_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-1262 | chr12 | 55834301 | 55834307 | 7mer-m8 | 55834286 | 55834308 | 144 | -16.78 |
| ADediting_356946 | chr12_55834303_+ | ENSG00000182796.14 | ENST00000637092.1 | TMEM198B-213 | hsa-miR-6736-5p | chr12 | 55834301 | 55834307 | 7mer-m8 | 55834288 | 55834308 | 143 | -16.1 |
| ADediting_356949 | chr12_55834338_+ | ENSG00000182796.14 | ENST00000636659.1 | TMEM198B-210 | hsa-miR-6807-5p | chr12 | 55834332 | 55834338 | 7mer-m8 | 55834318 | 55834339 | 148 | -19.37 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for TMEM198B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000478241.6 | lncRNA |  |  |
| ENST00000636659.1 | lncRNA |  |  |
| ENST00000636428.1 | lncRNA |  |  |
| ENST00000482378.6 | lncRNA |  |  |
| ENST00000637092.1 | lncRNA |  |  |
| ENST00000508246.6 | lncRNA |  |  |
| ENST00000471276.5 | lncRNA |  |  |
| ENST00000487582.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1533254 | ENST00000478241.6 | chr12_55835061_+ | 1741 | -1083.70 | -1082.90 | -1083.70 |
| ADediting_356945 | ENST00000636659.1 | chr12_55834295_+ | 570 | -244.30 | -244.00 | -247.40 |
| ADediting_356946 | ENST00000636659.1 | chr12_55834303_+ | 578 | -243.30 | -244.00 | -247.40 |
| ADediting_356947 | ENST00000636659.1 | chr12_55834317_+ | 592 | -244.00 | -244.00 | -247.40 |
| ADediting_356948 | ENST00000636659.1 | chr12_55834325_+ | 600 | -245.50 | -244.00 | -247.40 |
| ADediting_356949 | ENST00000636659.1 | chr12_55834338_+ | 613 | -243.60 | -244.00 | -247.40 |
| ADediting_1533254 | ENST00000636428.1 | chr12_55835061_+ | 711 | -338.70 | -339.40 | -338.70 |
| ADediting_1533254 | ENST00000482378.6 | chr12_55835061_+ | 1045 | -836.50 | -835.70 | -836.50 |
| ADediting_356945 | ENST00000637092.1 | chr12_55834295_+ | 524 | -211.40 | -211.10 | -212.50 |
| ADediting_356946 | ENST00000637092.1 | chr12_55834303_+ | 532 | -211.90 | -211.10 | -212.50 |
| ADediting_356947 | ENST00000637092.1 | chr12_55834317_+ | 546 | -212.00 | -211.10 | -212.50 |
| ADediting_1533254 | ENST00000508246.6 | chr12_55835061_+ | 1130 | -871.10 | -871.70 | -871.10 |
| ADediting_1533254 | ENST00000471276.5 | chr12_55835061_+ | 773 | -692.90 | -692.10 | -692.90 |
| ADediting_1533254 | ENST00000487582.1 | chr12_55835061_+ | 906 | -587.80 | -588.50 | -587.80 |
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Relation with ADAR for TMEM198B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_356932 | chr12_55833904_+ | 0.351781048997716 | 0.0530623016665627 | 0.316368733387876 | -0.057091026545011 | 2.42405722445985e-10 | 0.349619114918438 |
| DLPFC | ADediting_356934 | chr12_55833914_+ | 0.942778003371946 | 0.00409327646785023 | 0.186630330342358 | -0.0752033459266978 | 5.6719643743337e-08 | 0.302314411334826 |
| DLPFC | ADediting_356949 | chr12_55834338_+ | 2.2882713892762e-05 | 0.238012669949949 | 7.2238760728253e-08 | 0.300013787013089 | 0.486866323578055 | 0.0396350718079542 |
| DLPFC | ADediting_356966 | chr12_55834507_+ | 0.000622309391266339 | 0.193284565260127 | 0.000595023576664112 | 0.193959096148446 | 2.05178187277163e-08 | 0.311775129087185 |
| TCX | ADediting_356966 | chr12_55834507_+ | 0.496280797090642 | -0.055975296144507 | 0.00824972326198441 | -0.214962526270754 | 2.3171253697423e-06 | 0.374670826396279 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.51596180905984e-09 | 0.334608509664052 | 1.67480346605458e-11 | 0.370173263897763 | 7.34422779463835e-15 | 0.422619918493441 |
| AC | 1.08469458612435e-33 | 0.668118651236094 | 8.26768274348465e-16 | 0.479954392990448 | 1.13692556756002e-40 | 0.716525810355155 |
| PCC | 9.97818427562332e-05 | 0.27781273650566 | 0.00107495916254235 | 0.234842306176352 | 9.75922088963613e-08 | 0.37410482471318 |
| TCX | 0.0645008501377007 | 0.151341274082463 | 0.000147104680939016 | -0.305065223279034 | 1.21235319172047e-30 | 0.769687540453153 |
| FP | 2.01923870831406e-05 | 0.313618076885233 | 0.483515571756646 | 0.0528522833725373 | 6.96523127421611e-23 | 0.651564556301758 |
| IFG | 0.0526296669519862 | 0.39198473615369 | 0.122668962954922 | 0.31693787153998 | 2.04359342856513e-06 | 0.795130579288336 |
| PG | 0.0463862788646334 | 0.14625001902044 | 0.556949468650095 | -0.043340615540024 | 3.25283224276834e-20 | 0.608379248414986 |
| STG | 0.222763908945773 | 0.134436422503055 | 0.067375834327615 | -0.20054973560615 | 1.65119978902555e-12 | 0.676391244128957 |
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Relation with AD stages for TMEM198B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.000167823350209613 | 0.357582111938577 |
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RelatedDrugs for TMEM198B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TMEM198B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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