ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for SMAD9

Gene summary

Gene information	Gene symbol	SMAD9
	Gene ID	4093
	Gene name	SMAD family member 9
	Synonyms	MADH6\|MADH9\|PPH2\|SMAD8\|SMAD8/9\|SMAD8A\|SMAD8B
	Cytomap	13q13.3
	Type of gene	protein-coding
	Description	mothers against decapentaplegic homolog 9MAD homolog 9Mothers against decapentaplegic, drosophila, homolog of, 9SMAD, mothers against DPP homolog 9
	Modification date	20200313
	UniProtAcc	O15198,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SMAD9

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_395061(36846007, -), ADediting_395062(36846017, -), ADediting_395063(36846020, -), ADediting_395064(36846031, -), ADediting_395065(36846032, -), ADediting_395066(36846052, -), ADediting_395067(36846057, -), ADediting_395068(36846075, -), ADediting_395069(36846076, -), ADediting_395070(36846081, -), ADediting_395071(36846089, -), ADediting_395072(36846092, -), ADediting_395073(36846098, -), ADediting_395074(36846100, -), ADediting_395075(36846114, -), ADediting_395076(36846224, -), ADediting_395077(36846226, -), ADediting_395078(36846238, -), ADediting_395079(36846239, -), ADediting_395080(36846240, -), ADediting_395081(36846248, -), ADediting_395082(36846326, -), ADediting_395083(36846366, -), ADediting_395084(36846375, -), ADediting_395085(36846412, -), ADediting_395086(36846428, -), ADediting_395087(36846442, -), ADediting_395088(36846444, -), ADediting_395089(36850476, -), ADediting_395090(36850477, -), ADediting_395091(36850491, -), ADediting_395092(36853042, -), ADediting_395093(36853100, -), ADediting_395094(36853163, -), ADediting_395095(36853202, -), ADediting_395096(36853940, -), ADediting_395097(36853962, -), ADediting_395098(36854073, -), ADediting_395099(36854076, -), ADediting_395100(36854083, -), ADediting_395101(36854492, -), ADediting_395102(36855156, -), ADediting_395103(36856888, -), ADediting_395104(36901816, -), ADediting_395105(36903264, -), ADediting_395106(36903265, -), ADediting_395107(36903330, -), ADediting_395108(36903397, -), ADediting_395109(36903398, -), ADediting_395110(36914411, -), ADediting_1616650(36846363, -), ADediting_1616651(36868616, -), ADediting_1616652(36907623, -),

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RNA editing positional annotations for SMAD9 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_395061	chr13_36846007_-	UTR3
ADediting_395062	chr13_36846017_-	UTR3
ADediting_395063	chr13_36846020_-	UTR3
ADediting_395064	chr13_36846031_-	UTR3
ADediting_395065	chr13_36846032_-	UTR3
ADediting_395066	chr13_36846052_-	UTR3
ADediting_395067	chr13_36846057_-	UTR3
ADediting_395068	chr13_36846075_-	UTR3
ADediting_395069	chr13_36846076_-	UTR3
ADediting_395070	chr13_36846081_-	UTR3
ADediting_395071	chr13_36846089_-	UTR3
ADediting_395072	chr13_36846092_-	UTR3
ADediting_395073	chr13_36846098_-	UTR3
ADediting_395074	chr13_36846100_-	UTR3
ADediting_395075	chr13_36846114_-	UTR3
ADediting_395076	chr13_36846224_-	UTR3
ADediting_395077	chr13_36846226_-	UTR3
ADediting_395078	chr13_36846238_-	UTR3
ADediting_395079	chr13_36846239_-	UTR3
ADediting_395080	chr13_36846240_-	UTR3
ADediting_395081	chr13_36846248_-	UTR3
ADediting_395082	chr13_36846326_-	UTR3
ADediting_395083	chr13_36846366_-	UTR3
ADediting_395084	chr13_36846375_-	UTR3
ADediting_395085	chr13_36846412_-	UTR3
ADediting_395086	chr13_36846428_-	UTR3
ADediting_395087	chr13_36846442_-	UTR3
ADediting_395088	chr13_36846444_-	UTR3
ADediting_395089	chr13_36850476_-	intronic
ADediting_395090	chr13_36850477_-	intronic
ADediting_395091	chr13_36850491_-	intronic
ADediting_395092	chr13_36853042_-	intronic
ADediting_395093	chr13_36853100_-	intronic
ADediting_395094	chr13_36853163_-	intronic
ADediting_395095	chr13_36853202_-	intronic
ADediting_395096	chr13_36853940_-	intronic
ADediting_395097	chr13_36853962_-	intronic
ADediting_395098	chr13_36854073_-	intronic
ADediting_395099	chr13_36854076_-	intronic
ADediting_395100	chr13_36854083_-	intronic
ADediting_395101	chr13_36854492_-	intronic
ADediting_395102	chr13_36855156_-	intronic
ADediting_395103	chr13_36856888_-	intronic
ADediting_395104	chr13_36901816_-	intronic
ADediting_395105	chr13_36903264_-	intronic
ADediting_395106	chr13_36903265_-	intronic
ADediting_395107	chr13_36903330_-	intronic
ADediting_395108	chr13_36903397_-	intronic
ADediting_395109	chr13_36903398_-	intronic
ADediting_395110	chr13_36914411_-	intronic
ADediting_1616650	chr13_36846363_-	UTR3
ADediting_1616651	chr13_36868616_-	intronic
ADediting_1616652	chr13_36907623_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_395061	chr13_36846007_-	SINE	Alu	Name=FRAM
ADediting_395062	chr13_36846017_-	SINE	Alu	Name=FRAM
ADediting_395063	chr13_36846020_-	SINE	Alu	Name=FRAM
ADediting_395064	chr13_36846031_-	SINE	Alu	Name=FRAM
ADediting_395065	chr13_36846032_-	SINE	Alu	Name=FRAM
ADediting_395066	chr13_36846052_-	SINE	Alu	Name=FRAM
ADediting_395067	chr13_36846057_-	SINE	Alu	Name=FRAM
ADediting_395068	chr13_36846075_-	SINE	Alu	Name=FRAM
ADediting_395069	chr13_36846076_-	SINE	Alu	Name=FRAM
ADediting_395070	chr13_36846081_-	SINE	Alu	Name=FRAM
ADediting_395071	chr13_36846089_-	SINE	Alu	Name=FRAM
ADediting_395072	chr13_36846092_-	SINE	Alu	Name=FRAM
ADediting_395073	chr13_36846098_-	SINE	Alu	Name=FRAM
ADediting_395074	chr13_36846100_-	SINE	Alu	Name=FRAM
ADediting_395075	chr13_36846114_-	SINE	Alu	Name=FRAM
ADediting_395076	chr13_36846224_-	SINE	Alu	Name=AluSc
ADediting_395077	chr13_36846226_-	SINE	Alu	Name=AluSc
ADediting_395078	chr13_36846238_-	SINE	Alu	Name=AluSc
ADediting_395079	chr13_36846239_-	SINE	Alu	Name=AluSc
ADediting_395080	chr13_36846240_-	SINE	Alu	Name=AluSc
ADediting_395081	chr13_36846248_-	SINE	Alu	Name=AluSc
ADediting_395082	chr13_36846326_-	SINE	Alu	Name=AluSc
ADediting_395083	chr13_36846366_-	SINE	Alu	Name=AluSc
ADediting_395084	chr13_36846375_-	SINE	Alu	Name=AluSc
ADediting_395085	chr13_36846412_-	SINE	Alu	Name=AluSc
ADediting_395086	chr13_36846428_-	SINE	Alu	Name=AluSc
ADediting_395087	chr13_36846442_-	SINE	Alu	Name=AluSc
ADediting_395088	chr13_36846444_-	SINE	Alu	Name=AluSc
ADediting_395089	chr13_36850476_-	SINE	Alu	Name=AluSz
ADediting_395090	chr13_36850477_-	SINE	Alu	Name=AluSz
ADediting_395091	chr13_36850491_-	SINE	Alu	Name=AluSz
ADediting_395092	chr13_36853042_-	SINE	Alu	Name=AluSx4
ADediting_395093	chr13_36853100_-	SINE	Alu	Name=AluSx4
ADediting_395094	chr13_36853163_-	SINE	Alu	Name=AluSx4
ADediting_395095	chr13_36853202_-	SINE	Alu	Name=AluSx4
ADediting_395096	chr13_36853940_-	SINE	Alu	Name=AluSx1
ADediting_395097	chr13_36853962_-	SINE	Alu	Name=AluSx1
ADediting_395098	chr13_36854073_-	SINE	Alu	Name=AluSx1
ADediting_395099	chr13_36854076_-	SINE	Alu	Name=AluSx1
ADediting_395100	chr13_36854083_-	SINE	Alu	Name=AluSx1
ADediting_395101	chr13_36854492_-	SINE	Alu	Name=AluSx1
ADediting_395102	chr13_36855156_-	SINE	Alu	Name=AluSz
ADediting_395103	chr13_36856888_-	SINE	Alu	Name=AluSq2
ADediting_395104	chr13_36901816_-	LINE	L1	Name=L1MB5
ADediting_395105	chr13_36903264_-	SINE	Alu	Name=AluSg
ADediting_395106	chr13_36903265_-	SINE	Alu	Name=AluSg
ADediting_395107	chr13_36903330_-	SINE	Alu	Name=AluSg
ADediting_395108	chr13_36903397_-	SINE	Alu	Name=AluSg
ADediting_395109	chr13_36903398_-	SINE	Alu	Name=AluSg
ADediting_395110	chr13_36914411_-	SINE	Alu	Name=AluY
ADediting_1616650	chr13_36846363_-	SINE	Alu	Name=AluSc
ADediting_1616651	chr13_36868616_-	SINE	Alu	Name=AluJr4
ADediting_1616652	chr13_36907623_-	SINE	Alu	Name=AluJr

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RNA A-to-I editing events in the alternative splicing sites for SMAD9

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SMAD9

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for SMAD9

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SMAD9

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-1255b-2-3p	chr13	36846361	36846367	7mer-m8	36846360	36846381	142	-11.99
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3614-5p	chr13	36846363	36846369	7mer-m8	36846362	36846385	152	-25.27
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-1255b-2-3p	chr13	36846361	36846367	7mer-m8	36846360	36846381	142	-11.99
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3614-5p	chr13	36846363	36846369	7mer-m8	36846362	36846385	152	-25.27
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-1255b-2-3p	chr13	36846361	36846367	7mer-m8	36846360	36846381	142	-11.99
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3614-5p	chr13	36846363	36846369	7mer-m8	36846362	36846385	152	-25.27
ADediting_395061	chr13_36846007_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-1972	chr13	36846002	36846008	7mer-m8	36846001	36846022	146	-21.16
ADediting_395061	chr13_36846007_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-1972	chr13	36846002	36846008	7mer-m8	36846001	36846022	146	-21.16
ADediting_395061	chr13_36846007_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-1972	chr13	36846002	36846008	7mer-m8	36846001	36846022	146	-21.16
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-127-5p	chr13	36846012	36846018	7mer-m8	36846011	36846032	140	-10.88
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4999-5p	chr13	36846016	36846022	7mer-m8	36846015	36846033	160	-15.13
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-127-5p	chr13	36846012	36846018	7mer-m8	36846011	36846032	140	-10.88
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4999-5p	chr13	36846016	36846022	7mer-m8	36846015	36846033	160	-15.13
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-127-5p	chr13	36846012	36846018	7mer-m8	36846011	36846032	140	-10.88
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4999-5p	chr13	36846016	36846022	7mer-m8	36846015	36846033	160	-15.13
ADediting_395064	chr13_36846031_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-7705	chr13	36846027	36846033	7mer-m8	36846026	36846045	149	-17.81
ADediting_395064	chr13_36846031_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-7705	chr13	36846027	36846033	7mer-m8	36846026	36846045	149	-17.81
ADediting_395064	chr13_36846031_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-7705	chr13	36846027	36846033	7mer-m8	36846026	36846045	149	-17.81
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6724-5p	chr13	36846052	36846058	7mer-m8	36846051	36846072	145	-25.05
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6773-5p	chr13	36846052	36846058	7mer-m8	36846051	36846073	153	-23.29
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6724-5p	chr13	36846052	36846058	7mer-m8	36846051	36846072	145	-25.05
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6773-5p	chr13	36846052	36846058	7mer-m8	36846051	36846073	153	-23.29
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6724-5p	chr13	36846052	36846058	7mer-m8	36846051	36846072	145	-25.05
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6773-5p	chr13	36846052	36846058	7mer-m8	36846051	36846073	153	-23.29
ADediting_395068	chr13_36846075_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3176	chr13	36846075	36846081	7mer-m8	36846074	36846092	140	-15.24
ADediting_395068	chr13_36846075_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3922-3p	chr13	36846075	36846081	7mer-m8	36846074	36846095	141	-19.73
ADediting_395068	chr13_36846075_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3176	chr13	36846075	36846081	7mer-m8	36846074	36846092	140	-15.24
ADediting_395068	chr13_36846075_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3922-3p	chr13	36846075	36846081	7mer-m8	36846074	36846095	141	-19.73
ADediting_395068	chr13_36846075_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3176	chr13	36846075	36846081	7mer-m8	36846074	36846092	140	-15.24
ADediting_395068	chr13_36846075_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3922-3p	chr13	36846075	36846081	7mer-m8	36846074	36846095	141	-19.73
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-518a-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-14.63
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-518b	chr13	36846085	36846091	7mer-m8	36846084	36846106	149	-19.8
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-518c-3p	chr13	36846085	36846091	7mer-m8	36846084	36846108	151	-22.18
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-518d-3p	chr13	36846085	36846091	7mer-m8	36846084	36846104	145	-18.35
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-518e-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-12.75
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-518f-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	149	-15.54
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-526a-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-16.07
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-518a-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-14.63
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-518b	chr13	36846085	36846091	7mer-m8	36846084	36846106	149	-19.8
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-518c-3p	chr13	36846085	36846091	7mer-m8	36846084	36846108	151	-22.18
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-518d-3p	chr13	36846085	36846091	7mer-m8	36846084	36846104	145	-18.35
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-518e-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-12.75
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-518f-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	149	-15.54
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-526a-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-16.07
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-518a-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-14.63
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-518b	chr13	36846085	36846091	7mer-m8	36846084	36846106	149	-19.8
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-518c-3p	chr13	36846085	36846091	7mer-m8	36846084	36846108	151	-22.18
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-518d-3p	chr13	36846085	36846091	7mer-m8	36846084	36846104	145	-18.35
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-518e-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-12.75
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-518f-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	149	-15.54
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-526a-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-16.07
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-371a-3p	chr13	36846087	36846093	7mer-m8	36846086	36846108	149	-20.03
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-371a-3p	chr13	36846087	36846093	7mer-m8	36846086	36846108	149	-20.03
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-371a-3p	chr13	36846087	36846093	7mer-m8	36846086	36846108	149	-20.03
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3619-3p	chr13	36846094	36846100	7mer-m8	36846093	36846114	140	-18.89
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3619-3p	chr13	36846094	36846100	7mer-m8	36846093	36846114	140	-18.89
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3619-3p	chr13	36846094	36846100	7mer-m8	36846093	36846114	140	-18.89
ADediting_395078	chr13_36846238_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3189-3p	chr13	36846237	36846243	7mer-m8	36846236	36846258	153	-24.98
ADediting_395078	chr13_36846238_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6813-3p	chr13	36846236	36846242	7mer-m8	36846235	36846255	140	-10.68
ADediting_395078	chr13_36846238_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3189-3p	chr13	36846237	36846243	7mer-m8	36846236	36846258	153	-24.98
ADediting_395078	chr13_36846238_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6813-3p	chr13	36846236	36846242	7mer-m8	36846235	36846255	140	-10.68
ADediting_395078	chr13_36846238_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3189-3p	chr13	36846237	36846243	7mer-m8	36846236	36846258	153	-24.98
ADediting_395078	chr13_36846238_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6813-3p	chr13	36846236	36846242	7mer-m8	36846235	36846255	140	-10.68
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-326	chr13	36846237	36846243	7mer-m8	36846236	36846255	140	-13.25
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-330-5p	chr13	36846237	36846243	7mer-m8	36846236	36846259	143	-20.01
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4314	chr13	36846238	36846244	7mer-m8	36846237	36846255	143	-20.84
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-514a-5p	chr13	36846236	36846242	7mer-m8	36846235	36846258	150	-18.62
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-326	chr13	36846237	36846243	7mer-m8	36846236	36846255	140	-13.25
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-330-5p	chr13	36846237	36846243	7mer-m8	36846236	36846259	143	-20.01
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4314	chr13	36846238	36846244	7mer-m8	36846237	36846255	143	-20.84
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-514a-5p	chr13	36846236	36846242	7mer-m8	36846235	36846258	150	-18.62
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-326	chr13	36846237	36846243	7mer-m8	36846236	36846255	140	-13.25
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-330-5p	chr13	36846237	36846243	7mer-m8	36846236	36846259	143	-20.01
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4314	chr13	36846238	36846244	7mer-m8	36846237	36846255	143	-20.84
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-514a-5p	chr13	36846236	36846242	7mer-m8	36846235	36846258	150	-18.62
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6771-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	152	-26.14
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6771-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	152	-26.14
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6771-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	152	-26.14
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6089	chr13	36846370	36846376	7mer-m8	36846369	36846392	164	-37.82
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6089	chr13	36846370	36846376	7mer-m8	36846369	36846392	164	-37.82
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6089	chr13	36846370	36846376	7mer-m8	36846369	36846392	164	-37.82
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-17-3p	chr13	36846412	36846418	7mer-m8	36846411	36846431	153	-18.02
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-485-5p	chr13	36846408	36846414	7mer-m8	36846407	36846427	153	-19.66
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6884-5p	chr13	36846408	36846414	7mer-m8	36846407	36846429	146	-21.96
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-17-3p	chr13	36846412	36846418	7mer-m8	36846411	36846431	153	-18.02
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-485-5p	chr13	36846408	36846414	7mer-m8	36846407	36846427	153	-19.66
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6884-5p	chr13	36846408	36846414	7mer-m8	36846407	36846429	146	-21.96
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-17-3p	chr13	36846412	36846418	7mer-m8	36846411	36846431	153	-18.02
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-485-5p	chr13	36846408	36846414	7mer-m8	36846407	36846427	153	-19.66
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6884-5p	chr13	36846408	36846414	7mer-m8	36846407	36846429	146	-21.96
ADediting_395087	chr13_36846442_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3620-3p	chr13	36846439	36846445	7mer-m8	36846438	36846459	140	-16.46
ADediting_395087	chr13_36846442_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3620-3p	chr13	36846439	36846445	7mer-m8	36846438	36846459	140	-16.46
ADediting_395087	chr13_36846442_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3620-3p	chr13	36846439	36846445	7mer-m8	36846438	36846459	140	-16.46
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-1234-3p	chr13	36846444	36846450	7mer-m8	36846443	36846464	150	-18.25
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-7107-5p	chr13	36846444	36846450	7mer-m8	36846443	36846465	155	-27.12
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-1234-3p	chr13	36846444	36846450	7mer-m8	36846443	36846464	150	-18.25
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-7107-5p	chr13	36846444	36846450	7mer-m8	36846443	36846465	155	-27.12
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-1234-3p	chr13	36846444	36846450	7mer-m8	36846443	36846464	150	-18.25
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-7107-5p	chr13	36846444	36846450	7mer-m8	36846443	36846465	155	-27.12

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-606	chr13	36846360	36846366	7mer-m8	36846359	36846379	140	-6.87
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-606	chr13	36846360	36846366	7mer-m8	36846359	36846379	140	-6.87
ADediting_1616650	chr13_36846363_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-606	chr13	36846360	36846366	7mer-m8	36846359	36846379	140	-6.87
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3149	chr13	36846017	36846023	7mer-m8	36846016	36846037	151	-11.65
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-382-5p	chr13	36846014	36846020	7mer-m8	36846013	36846035	151	-17.67
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3149	chr13	36846017	36846023	7mer-m8	36846016	36846037	151	-11.65
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-382-5p	chr13	36846014	36846020	7mer-m8	36846013	36846035	151	-17.67
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3149	chr13	36846017	36846023	7mer-m8	36846016	36846037	151	-11.65
ADediting_395062	chr13_36846017_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-382-5p	chr13	36846014	36846020	7mer-m8	36846013	36846035	151	-17.67
ADediting_395063	chr13_36846020_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3149	chr13	36846017	36846023	7mer-m8	36846016	36846037	151	-11.65
ADediting_395063	chr13_36846020_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3149	chr13	36846017	36846023	7mer-m8	36846016	36846037	151	-11.65
ADediting_395063	chr13_36846020_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3149	chr13	36846017	36846023	7mer-m8	36846016	36846037	151	-11.65
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-10400-3p	chr13	36846052	36846058	7mer-m8	36846051	36846070	145	-20.89
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-1343-3p	chr13	36846049	36846055	7mer-m8	36846048	36846071	143	-24.03
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4674	chr13	36846052	36846058	7mer-m8	36846051	36846071	147	-22.84
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6783-3p	chr13	36846049	36846055	7mer-m8	36846048	36846069	151	-25.03
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-939-3p	chr13	36846049	36846056	8mer-1a	36846049	36846071	148	-23.16
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-10400-3p	chr13	36846052	36846058	7mer-m8	36846051	36846070	145	-20.89
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-1343-3p	chr13	36846049	36846055	7mer-m8	36846048	36846071	143	-24.03
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4674	chr13	36846052	36846058	7mer-m8	36846051	36846071	147	-22.84
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6783-3p	chr13	36846049	36846055	7mer-m8	36846048	36846069	151	-25.03
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-939-3p	chr13	36846049	36846056	8mer-1a	36846049	36846071	148	-23.16
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-10400-3p	chr13	36846052	36846058	7mer-m8	36846051	36846070	145	-20.89
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-1343-3p	chr13	36846049	36846055	7mer-m8	36846048	36846071	143	-24.03
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4674	chr13	36846052	36846058	7mer-m8	36846051	36846071	147	-22.84
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6783-3p	chr13	36846049	36846055	7mer-m8	36846048	36846069	151	-25.03
ADediting_395066	chr13_36846052_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-939-3p	chr13	36846049	36846056	8mer-1a	36846049	36846071	148	-23.16
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-10400-3p	chr13	36846052	36846058	7mer-m8	36846051	36846070	145	-20.89
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-24-3p	chr13	36846054	36846060	7mer-m8	36846053	36846074	146	-16.13
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4330	chr13	36846056	36846062	7mer-m8	36846055	36846071	150	-14.11
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4437	chr13	36846052	36846059	8mer-1a	36846052	36846072	146	-20.1
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4674	chr13	36846052	36846058	7mer-m8	36846051	36846071	147	-22.84
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-10400-3p	chr13	36846052	36846058	7mer-m8	36846051	36846070	145	-20.89
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-24-3p	chr13	36846054	36846060	7mer-m8	36846053	36846074	146	-16.13
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4330	chr13	36846056	36846062	7mer-m8	36846055	36846071	150	-14.11
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4437	chr13	36846052	36846059	8mer-1a	36846052	36846072	146	-20.1
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4674	chr13	36846052	36846058	7mer-m8	36846051	36846071	147	-22.84
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-10400-3p	chr13	36846052	36846058	7mer-m8	36846051	36846070	145	-20.89
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-24-3p	chr13	36846054	36846060	7mer-m8	36846053	36846074	146	-16.13
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4330	chr13	36846056	36846062	7mer-m8	36846055	36846071	150	-14.11
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4437	chr13	36846052	36846059	8mer-1a	36846052	36846072	146	-20.1
ADediting_395067	chr13_36846057_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4674	chr13	36846052	36846058	7mer-m8	36846051	36846071	147	-22.84
ADediting_395069	chr13_36846076_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6878-3p	chr13	36846075	36846082	8mer-1a	36846075	36846095	142	-14.14
ADediting_395069	chr13_36846076_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6878-3p	chr13	36846075	36846082	8mer-1a	36846075	36846095	142	-14.14
ADediting_395069	chr13_36846076_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6878-3p	chr13	36846075	36846082	8mer-1a	36846075	36846095	142	-14.14
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-150-5p	chr13	36846080	36846086	7mer-m8	36846079	36846102	142	-15.8
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6778-3p	chr13	36846078	36846084	7mer-m8	36846077	36846097	143	-13.97
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6878-3p	chr13	36846075	36846082	8mer-1a	36846075	36846095	142	-14.14
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-150-5p	chr13	36846080	36846086	7mer-m8	36846079	36846102	142	-15.8
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6778-3p	chr13	36846078	36846084	7mer-m8	36846077	36846097	143	-13.97
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6878-3p	chr13	36846075	36846082	8mer-1a	36846075	36846095	142	-14.14
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-150-5p	chr13	36846080	36846086	7mer-m8	36846079	36846102	142	-15.8
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6778-3p	chr13	36846078	36846084	7mer-m8	36846077	36846097	143	-13.97
ADediting_395070	chr13_36846081_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6878-3p	chr13	36846075	36846082	8mer-1a	36846075	36846095	142	-14.14
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-302a-3p	chr13	36846086	36846092	7mer-m8	36846085	36846106	142	-11.37
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-302b-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	141	-8.77
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-302c-3p	chr13	36846086	36846092	7mer-m8	36846085	36846107	140	-11.96
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-302d-3p	chr13	36846086	36846092	7mer-m8	36846085	36846108	148	-17.33
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-302e	chr13	36846086	36846092	7mer-m8	36846085	36846101	140	-8.62
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-512-3p	chr13	36846087	36846093	7mer-m8	36846086	36846112	145	-19.04
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-519d-3p	chr13	36846085	36846091	7mer-m8	36846084	36846104	142	-14.08
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-520a-3p	chr13	36846086	36846092	7mer-m8	36846085	36846108	142	-17.03
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-520b-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-15.11
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-520c-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	142	-15.23
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-520d-3p	chr13	36846086	36846092	7mer-m8	36846085	36846106	140	-14.68
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-520e-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-14.37
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-520h	chr13	36846084	36846090	7mer-m8	36846083	36846105	154	-15.41
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-526b-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-14.21
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-302a-3p	chr13	36846086	36846092	7mer-m8	36846085	36846106	142	-11.37
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-302b-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	141	-8.77
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-302c-3p	chr13	36846086	36846092	7mer-m8	36846085	36846107	140	-11.96
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-302d-3p	chr13	36846086	36846092	7mer-m8	36846085	36846108	148	-17.33
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-302e	chr13	36846086	36846092	7mer-m8	36846085	36846101	140	-8.62
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-512-3p	chr13	36846087	36846093	7mer-m8	36846086	36846112	145	-19.04
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-519d-3p	chr13	36846085	36846091	7mer-m8	36846084	36846104	142	-14.08
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-520a-3p	chr13	36846086	36846092	7mer-m8	36846085	36846108	142	-17.03
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-520b-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-15.11
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-520c-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	142	-15.23
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-520d-3p	chr13	36846086	36846092	7mer-m8	36846085	36846106	140	-14.68
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-520e-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-14.37
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-520h	chr13	36846084	36846090	7mer-m8	36846083	36846105	154	-15.41
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-526b-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-14.21
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-302a-3p	chr13	36846086	36846092	7mer-m8	36846085	36846106	142	-11.37
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-302b-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	141	-8.77
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-302c-3p	chr13	36846086	36846092	7mer-m8	36846085	36846107	140	-11.96
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-302d-3p	chr13	36846086	36846092	7mer-m8	36846085	36846108	148	-17.33
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-302e	chr13	36846086	36846092	7mer-m8	36846085	36846101	140	-8.62
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-512-3p	chr13	36846087	36846093	7mer-m8	36846086	36846112	145	-19.04
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-519d-3p	chr13	36846085	36846091	7mer-m8	36846084	36846104	142	-14.08
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-520a-3p	chr13	36846086	36846092	7mer-m8	36846085	36846108	142	-17.03
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-520b-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-15.11
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-520c-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	142	-15.23
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-520d-3p	chr13	36846086	36846092	7mer-m8	36846085	36846106	140	-14.68
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-520e-3p	chr13	36846086	36846092	7mer-m8	36846085	36846105	140	-14.37
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-520h	chr13	36846084	36846090	7mer-m8	36846083	36846105	154	-15.41
ADediting_395071	chr13_36846089_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-526b-3p	chr13	36846085	36846091	7mer-m8	36846084	36846105	145	-14.21
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4731-5p	chr13	36846089	36846095	7mer-1a	36846089	36846109	142	-19.63
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-512-3p	chr13	36846087	36846093	7mer-m8	36846086	36846112	145	-19.04
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4731-5p	chr13	36846089	36846095	7mer-1a	36846089	36846109	142	-19.63
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-512-3p	chr13	36846087	36846093	7mer-m8	36846086	36846112	145	-19.04
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4731-5p	chr13	36846089	36846095	7mer-1a	36846089	36846109	142	-19.63
ADediting_395072	chr13_36846092_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-512-3p	chr13	36846087	36846093	7mer-m8	36846086	36846112	145	-19.04
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-625-3p	chr13	36846096	36846102	7mer-m8	36846095	36846116	152	-12.62
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-8052	chr13	36846092	36846098	7mer-1a	36846092	36846110	144	-25.51
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-625-3p	chr13	36846096	36846102	7mer-m8	36846095	36846116	152	-12.62
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-8052	chr13	36846092	36846098	7mer-1a	36846092	36846110	144	-25.51
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-625-3p	chr13	36846096	36846102	7mer-m8	36846095	36846116	152	-12.62
ADediting_395073	chr13_36846098_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-8052	chr13	36846092	36846098	7mer-1a	36846092	36846110	144	-25.51
ADediting_395074	chr13_36846100_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-625-3p	chr13	36846096	36846102	7mer-m8	36846095	36846116	152	-12.62
ADediting_395074	chr13_36846100_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-625-3p	chr13	36846096	36846102	7mer-m8	36846095	36846116	152	-12.62
ADediting_395074	chr13_36846100_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-625-3p	chr13	36846096	36846102	7mer-m8	36846095	36846116	152	-12.62
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-324-3p	chr13	36846110	36846116	7mer-m8	36846109	36846132	154	-20.9
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4252	chr13	36846109	36846115	7mer-m8	36846108	36846127	149	-20.66
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6807-3p	chr13	36846112	36846118	7mer-m8	36846111	36846132	150	-18.87
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-324-3p	chr13	36846110	36846116	7mer-m8	36846109	36846132	154	-20.9
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4252	chr13	36846109	36846115	7mer-m8	36846108	36846127	149	-20.66
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6807-3p	chr13	36846112	36846118	7mer-m8	36846111	36846132	150	-18.87
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-324-3p	chr13	36846110	36846116	7mer-m8	36846109	36846132	154	-20.9
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4252	chr13	36846109	36846115	7mer-m8	36846108	36846127	149	-20.66
ADediting_395075	chr13_36846114_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6807-3p	chr13	36846112	36846118	7mer-m8	36846111	36846132	150	-18.87
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-887-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	143	-13.53
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-887-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	143	-13.53
ADediting_395079	chr13_36846239_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-887-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	143	-13.53
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-30b-3p	chr13	36846239	36846246	8mer-1a	36846239	36846260	151	-16.71
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3689a-3p	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-22.03
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3689b-3p	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-20.79
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3689c	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-20.79
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6779-5p	chr13	36846239	36846246	8mer-1a	36846239	36846257	148	-23.32
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6780a-5p	chr13	36846239	36846246	8mer-1a	36846239	36846262	152	-21.42
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-887-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	143	-13.53
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-30b-3p	chr13	36846239	36846246	8mer-1a	36846239	36846260	151	-16.71
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3689a-3p	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-22.03
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3689b-3p	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-20.79
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3689c	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-20.79
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6779-5p	chr13	36846239	36846246	8mer-1a	36846239	36846257	148	-23.32
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6780a-5p	chr13	36846239	36846246	8mer-1a	36846239	36846262	152	-21.42
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-887-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	143	-13.53
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-30b-3p	chr13	36846239	36846246	8mer-1a	36846239	36846260	151	-16.71
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3689a-3p	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-22.03
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3689b-3p	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-20.79
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3689c	chr13	36846239	36846246	8mer-1a	36846239	36846259	147	-20.79
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6779-5p	chr13	36846239	36846246	8mer-1a	36846239	36846257	148	-23.32
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6780a-5p	chr13	36846239	36846246	8mer-1a	36846239	36846262	152	-21.42
ADediting_395080	chr13_36846240_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-887-5p	chr13	36846238	36846245	8mer-1a	36846238	36846257	143	-13.53
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4478	chr13	36846244	36846250	7mer-m8	36846243	36846259	150	-23.72
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4649-3p	chr13	36846247	36846253	7mer-m8	36846246	36846266	147	-14.72
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-485-5p	chr13	36846243	36846249	7mer-m8	36846242	36846264	149	-17.54
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6765-5p	chr13	36846248	36846254	7mer-m8	36846247	36846274	154	-27.66
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6884-5p	chr13	36846243	36846249	7mer-m8	36846242	36846263	154	-23.23
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-7160-5p	chr13	36846246	36846252	7mer-m8	36846245	36846263	154	-22.76
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4478	chr13	36846244	36846250	7mer-m8	36846243	36846259	150	-23.72
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4649-3p	chr13	36846247	36846253	7mer-m8	36846246	36846266	147	-14.72
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-485-5p	chr13	36846243	36846249	7mer-m8	36846242	36846264	149	-17.54
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6765-5p	chr13	36846248	36846254	7mer-m8	36846247	36846274	154	-27.66
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6884-5p	chr13	36846243	36846249	7mer-m8	36846242	36846263	154	-23.23
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-7160-5p	chr13	36846246	36846252	7mer-m8	36846245	36846263	154	-22.76
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4478	chr13	36846244	36846250	7mer-m8	36846243	36846259	150	-23.72
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4649-3p	chr13	36846247	36846253	7mer-m8	36846246	36846266	147	-14.72
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-485-5p	chr13	36846243	36846249	7mer-m8	36846242	36846264	149	-17.54
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6765-5p	chr13	36846248	36846254	7mer-m8	36846247	36846274	154	-27.66
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6884-5p	chr13	36846243	36846249	7mer-m8	36846242	36846263	154	-23.23
ADediting_395081	chr13_36846248_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-7160-5p	chr13	36846246	36846252	7mer-m8	36846245	36846263	154	-22.76
ADediting_395083	chr13_36846366_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-12126	chr13	36846363	36846370	8mer-1a	36846363	36846386	147	-13.23
ADediting_395083	chr13_36846366_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-887-5p	chr13	36846366	36846372	7mer-m8	36846365	36846384	143	-19.73
ADediting_395083	chr13_36846366_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-12126	chr13	36846363	36846370	8mer-1a	36846363	36846386	147	-13.23
ADediting_395083	chr13_36846366_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-887-5p	chr13	36846366	36846372	7mer-m8	36846365	36846384	143	-19.73
ADediting_395083	chr13_36846366_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-12126	chr13	36846363	36846370	8mer-1a	36846363	36846386	147	-13.23
ADediting_395083	chr13_36846366_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-887-5p	chr13	36846366	36846372	7mer-m8	36846365	36846384	143	-19.73
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4478	chr13	36846371	36846377	7mer-m8	36846370	36846385	149	-25.05
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-4649-3p	chr13	36846374	36846380	7mer-m8	36846373	36846393	140	-14.3
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-7160-5p	chr13	36846373	36846379	7mer-m8	36846372	36846392	146	-17.63
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4478	chr13	36846371	36846377	7mer-m8	36846370	36846385	149	-25.05
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-4649-3p	chr13	36846374	36846380	7mer-m8	36846373	36846393	140	-14.3
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-7160-5p	chr13	36846373	36846379	7mer-m8	36846372	36846392	146	-17.63
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4478	chr13	36846371	36846377	7mer-m8	36846370	36846385	149	-25.05
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-4649-3p	chr13	36846374	36846380	7mer-m8	36846373	36846393	140	-14.3
ADediting_395084	chr13_36846375_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-7160-5p	chr13	36846373	36846379	7mer-m8	36846372	36846392	146	-17.63
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-377-5p	chr13	36846408	36846414	7mer-m8	36846407	36846428	155	-19.35
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6086	chr13	36846408	36846414	7mer-m8	36846407	36846426	148	-19
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-6516-5p	chr13	36846412	36846418	7mer-m8	36846411	36846434	145	-14.71
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-377-5p	chr13	36846408	36846414	7mer-m8	36846407	36846428	155	-19.35
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6086	chr13	36846408	36846414	7mer-m8	36846407	36846426	148	-19
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-6516-5p	chr13	36846412	36846418	7mer-m8	36846411	36846434	145	-14.71
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-377-5p	chr13	36846408	36846414	7mer-m8	36846407	36846428	155	-19.35
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6086	chr13	36846408	36846414	7mer-m8	36846407	36846426	148	-19
ADediting_395085	chr13_36846412_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-6516-5p	chr13	36846412	36846418	7mer-m8	36846411	36846434	145	-14.71
ADediting_395087	chr13_36846442_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-514a-5p	chr13	36846440	36846446	7mer-m8	36846439	36846462	152	-23.9
ADediting_395087	chr13_36846442_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-514a-5p	chr13	36846440	36846446	7mer-m8	36846439	36846462	152	-23.9
ADediting_395087	chr13_36846442_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-514a-5p	chr13	36846440	36846446	7mer-m8	36846439	36846462	152	-23.9
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-3922-3p	chr13	36846442	36846449	8mer-1a	36846442	36846465	148	-19.78
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-514a-5p	chr13	36846440	36846446	7mer-m8	36846439	36846462	152	-23.9
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-3922-3p	chr13	36846442	36846449	8mer-1a	36846442	36846465	148	-19.78
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-514a-5p	chr13	36846440	36846446	7mer-m8	36846439	36846462	152	-23.9
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-3922-3p	chr13	36846442	36846449	8mer-1a	36846442	36846465	148	-19.78
ADediting_395088	chr13_36846444_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-514a-5p	chr13	36846440	36846446	7mer-m8	36846439	36846462	152	-23.9

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1556067

chr19_40282625_-

ENSG00000120693.13

ENST00000350148.9

SMAD9-201

hsa-miR-641

chr13

36845838

36845845

8mer-1a

36845838

36845860

143

-11.75

ADediting_1556067

chr19_40282625_-

ENSG00000120693.13

ENST00000350148.9

SMAD9-201

hsa-miR-641

chr13

36846695

36846702

8mer-1a

36846695

36846718

158

-17.44

ADediting_1556067

chr19_40282625_-

ENSG00000120693.13

ENST00000379826.4

SMAD9-202

hsa-miR-641

chr13

36845838

36845845

8mer-1a

36845838

36845860

143

-11.75

ADediting_1556067

chr19_40282625_-

ENSG00000120693.13

ENST00000379826.4

SMAD9-202

hsa-miR-641

chr13

36846695

36846702

8mer-1a

36846695

36846718

158

-17.44

ADediting_1556067

chr19_40282625_-

ENSG00000120693.13

ENST00000399275.6

SMAD9-203

hsa-miR-641

chr13

36845838

36845845

8mer-1a

36845838

36845860

143

-11.75

ADediting_1556067

chr19_40282625_-

ENSG00000120693.13

ENST00000399275.6

SMAD9-203

hsa-miR-641

chr13

36846695

36846702

8mer-1a

36846695

36846718

158

-17.44

ADediting_843620

chr2_207754818_+

ENSG00000120693.13

ENST00000350148.9

SMAD9-201

hsa-miR-4775

chr13

36845964

36845971

8mer-1a

36845964

36845985

161

-11.35

ADediting_843620

chr2_207754818_+

ENSG00000120693.13

ENST00000379826.4

SMAD9-202

hsa-miR-4775

chr13

36845964

36845971

8mer-1a

36845964

36845985

161

-11.35

ADediting_843620

chr2_207754818_+

ENSG00000120693.13

ENST00000399275.6

SMAD9-203

hsa-miR-4775

chr13

36845964

36845971

8mer-1a

36845964

36845985

161

-11.35

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1097295	chr3_85385762_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-5688	chr13	36845414	36845420	7mer-m8	36845413	36845434	140	-9.4
ADediting_1097295	chr3_85385762_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-5688	chr13	36848528	36848534	7mer-m8	36848527	36848549	149	-8.61
ADediting_1097295	chr3_85385762_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-5688	chr13	36845414	36845420	7mer-m8	36845413	36845434	140	-9.4
ADediting_1097295	chr3_85385762_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-5688	chr13	36848528	36848534	7mer-m8	36848527	36848549	149	-8.61
ADediting_1097295	chr3_85385762_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-5688	chr13	36845414	36845420	7mer-m8	36845413	36845434	140	-9.4
ADediting_1097295	chr3_85385762_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-5688	chr13	36848528	36848534	7mer-m8	36848527	36848549	149	-8.61
ADediting_1391023	chr8_140732605_-	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-151a-3p	chr13	36848023	36848029	7mer-m8	36848022	36848042	155	-11.74
ADediting_1391023	chr8_140732605_-	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-151a-3p	chr13	36848023	36848029	7mer-m8	36848022	36848042	155	-11.74
ADediting_1391023	chr8_140732605_-	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-151a-3p	chr13	36848023	36848029	7mer-m8	36848022	36848042	155	-11.74
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36845946	36845952	7mer-m8	36845945	36845966	140	-9.1
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36846600	36846606	7mer-m8	36846599	36846620	141	-11.43
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36846720	36846727	8mer-1a	36846720	36846739	147	-13.23
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36848616	36848622	7mer-m8	36848615	36848633	151	-19.53
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36845946	36845952	7mer-m8	36845945	36845966	140	-9.1
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36846600	36846606	7mer-m8	36846599	36846620	141	-11.43
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36846720	36846727	8mer-1a	36846720	36846739	147	-13.23
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36848616	36848622	7mer-m8	36848615	36848633	151	-19.53
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36845946	36845952	7mer-m8	36845945	36845966	140	-9.1
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36846600	36846606	7mer-m8	36846599	36846620	141	-11.43
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36846720	36846727	8mer-1a	36846720	36846739	147	-13.23
ADediting_1535953	chr14_101045971_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36848616	36848622	7mer-m8	36848615	36848633	151	-19.53
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36845946	36845952	7mer-m8	36845945	36845966	140	-9.1
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36846600	36846606	7mer-m8	36846599	36846620	141	-11.43
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36846720	36846727	8mer-1a	36846720	36846739	147	-13.23
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000350148.9	SMAD9-201	hsa-miR-381-3p	chr13	36848616	36848622	7mer-m8	36848615	36848633	151	-19.53
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36845946	36845952	7mer-m8	36845945	36845966	140	-9.1
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36846600	36846606	7mer-m8	36846599	36846620	141	-11.43
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36846720	36846727	8mer-1a	36846720	36846739	147	-13.23
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000379826.4	SMAD9-202	hsa-miR-381-3p	chr13	36848616	36848622	7mer-m8	36848615	36848633	151	-19.53
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36845946	36845952	7mer-m8	36845945	36845966	140	-9.1
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36846600	36846606	7mer-m8	36846599	36846620	141	-11.43
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36846720	36846727	8mer-1a	36846720	36846739	147	-13.23
ADediting_1535954	chr14_101045974_+	ENSG00000120693.13	ENST00000399275.6	SMAD9-203	hsa-miR-381-3p	chr13	36848616	36848622	7mer-m8	36848615	36848633	151	-19.53

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SMAD9

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000399275.6	protein_coding
ENST00000350148.9	protein_coding
ENST00000379826.4	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_395061	ENST00000399275.6	chr13_36846007_-	4213	-1577.90	-1571.30	-1613.30
ADediting_395062	ENST00000399275.6	chr13_36846017_-	4203	-1571.60	-1571.30	-1613.30
ADediting_395063	ENST00000399275.6	chr13_36846020_-	4200	-1577.30	-1571.30	-1613.30
ADediting_395064	ENST00000399275.6	chr13_36846031_-	4189	-1578.00	-1571.30	-1613.30
ADediting_395065	ENST00000399275.6	chr13_36846032_-	4188	-1570.40	-1571.30	-1613.30
ADediting_395066	ENST00000399275.6	chr13_36846052_-	4168	-1577.50	-1571.30	-1613.30
ADediting_395067	ENST00000399275.6	chr13_36846057_-	4163	-1570.30	-1571.30	-1613.30
ADediting_395068	ENST00000399275.6	chr13_36846075_-	4145	-1571.30	-1571.30	-1613.30
ADediting_395069	ENST00000399275.6	chr13_36846076_-	4144	-1575.00	-1571.30	-1613.30
ADediting_395070	ENST00000399275.6	chr13_36846081_-	4139	-1570.40	-1571.30	-1613.30
ADediting_395071	ENST00000399275.6	chr13_36846089_-	4131	-1570.90	-1571.30	-1613.30
ADediting_395072	ENST00000399275.6	chr13_36846092_-	4128	-1570.60	-1571.30	-1613.30
ADediting_395073	ENST00000399275.6	chr13_36846098_-	4122	-1570.90	-1571.30	-1613.30
ADediting_395074	ENST00000399275.6	chr13_36846100_-	4120	-1577.50	-1571.30	-1613.30
ADediting_395075	ENST00000399275.6	chr13_36846114_-	4106	-1570.60	-1571.30	-1613.30
ADediting_395076	ENST00000399275.6	chr13_36846224_-	3996	-1571.30	-1571.30	-1613.30
ADediting_395077	ENST00000399275.6	chr13_36846226_-	3994	-1571.00	-1571.30	-1613.30
ADediting_395078	ENST00000399275.6	chr13_36846238_-	3982	-1571.00	-1571.30	-1613.30
ADediting_395079	ENST00000399275.6	chr13_36846239_-	3981	-1571.40	-1571.30	-1613.30
ADediting_395080	ENST00000399275.6	chr13_36846240_-	3980	-1571.00	-1571.30	-1613.30
ADediting_395081	ENST00000399275.6	chr13_36846248_-	3972	-1575.00	-1571.30	-1613.30
ADediting_395082	ENST00000399275.6	chr13_36846326_-	3894	-1571.30	-1571.30	-1613.30
ADediting_1616650	ENST00000399275.6	chr13_36846363_-	3857	-1572.70	-1571.30	-1613.30
ADediting_395083	ENST00000399275.6	chr13_36846366_-	3854	-1571.00	-1571.30	-1613.30
ADediting_395084	ENST00000399275.6	chr13_36846375_-	3845	-1572.80	-1571.30	-1613.30
ADediting_395085	ENST00000399275.6	chr13_36846412_-	3808	-1578.00	-1571.30	-1613.30
ADediting_395086	ENST00000399275.6	chr13_36846428_-	3792	-1570.70	-1571.30	-1613.30
ADediting_395087	ENST00000399275.6	chr13_36846442_-	3778	-1570.30	-1571.30	-1613.30
ADediting_395088	ENST00000399275.6	chr13_36846444_-	3776	-1571.30	-1571.30	-1613.30
ADediting_395061	ENST00000350148.9	chr13_36846007_-	4271	-1623.40	-1616.80	-1658.80
ADediting_395062	ENST00000350148.9	chr13_36846017_-	4261	-1617.10	-1616.80	-1658.80
ADediting_395063	ENST00000350148.9	chr13_36846020_-	4258	-1622.80	-1616.80	-1658.80
ADediting_395064	ENST00000350148.9	chr13_36846031_-	4247	-1623.50	-1616.80	-1658.80
ADediting_395065	ENST00000350148.9	chr13_36846032_-	4246	-1615.90	-1616.80	-1658.80
ADediting_395066	ENST00000350148.9	chr13_36846052_-	4226	-1623.00	-1616.80	-1658.80
ADediting_395067	ENST00000350148.9	chr13_36846057_-	4221	-1615.80	-1616.80	-1658.80
ADediting_395068	ENST00000350148.9	chr13_36846075_-	4203	-1616.80	-1616.80	-1658.80
ADediting_395069	ENST00000350148.9	chr13_36846076_-	4202	-1620.50	-1616.80	-1658.80
ADediting_395070	ENST00000350148.9	chr13_36846081_-	4197	-1615.90	-1616.80	-1658.80
ADediting_395071	ENST00000350148.9	chr13_36846089_-	4189	-1616.40	-1616.80	-1658.80
ADediting_395072	ENST00000350148.9	chr13_36846092_-	4186	-1616.10	-1616.80	-1658.80
ADediting_395073	ENST00000350148.9	chr13_36846098_-	4180	-1616.40	-1616.80	-1658.80
ADediting_395074	ENST00000350148.9	chr13_36846100_-	4178	-1623.00	-1616.80	-1658.80
ADediting_395075	ENST00000350148.9	chr13_36846114_-	4164	-1616.10	-1616.80	-1658.80
ADediting_395076	ENST00000350148.9	chr13_36846224_-	4054	-1616.80	-1616.80	-1658.80
ADediting_395077	ENST00000350148.9	chr13_36846226_-	4052	-1616.50	-1616.80	-1658.80
ADediting_395078	ENST00000350148.9	chr13_36846238_-	4040	-1616.50	-1616.80	-1658.80
ADediting_395079	ENST00000350148.9	chr13_36846239_-	4039	-1616.90	-1616.80	-1658.80
ADediting_395080	ENST00000350148.9	chr13_36846240_-	4038	-1616.50	-1616.80	-1658.80
ADediting_395081	ENST00000350148.9	chr13_36846248_-	4030	-1620.50	-1616.80	-1658.80
ADediting_395082	ENST00000350148.9	chr13_36846326_-	3952	-1616.80	-1616.80	-1658.80
ADediting_1616650	ENST00000350148.9	chr13_36846363_-	3915	-1618.20	-1616.80	-1658.80
ADediting_395083	ENST00000350148.9	chr13_36846366_-	3912	-1616.50	-1616.80	-1658.80
ADediting_395084	ENST00000350148.9	chr13_36846375_-	3903	-1618.30	-1616.80	-1658.80
ADediting_395085	ENST00000350148.9	chr13_36846412_-	3866	-1623.50	-1616.80	-1658.80
ADediting_395086	ENST00000350148.9	chr13_36846428_-	3850	-1616.20	-1616.80	-1658.80
ADediting_395087	ENST00000350148.9	chr13_36846442_-	3836	-1615.80	-1616.80	-1658.80
ADediting_395088	ENST00000350148.9	chr13_36846444_-	3834	-1616.80	-1616.80	-1658.80
ADediting_395061	ENST00000379826.4	chr13_36846007_-	4416	-1671.90	-1665.30	-1707.30
ADediting_395062	ENST00000379826.4	chr13_36846017_-	4406	-1665.60	-1665.30	-1707.30
ADediting_395063	ENST00000379826.4	chr13_36846020_-	4403	-1671.30	-1665.30	-1707.30
ADediting_395064	ENST00000379826.4	chr13_36846031_-	4392	-1672.00	-1665.30	-1707.30
ADediting_395065	ENST00000379826.4	chr13_36846032_-	4391	-1664.40	-1665.30	-1707.30
ADediting_395066	ENST00000379826.4	chr13_36846052_-	4371	-1671.50	-1665.30	-1707.30
ADediting_395067	ENST00000379826.4	chr13_36846057_-	4366	-1664.30	-1665.30	-1707.30
ADediting_395068	ENST00000379826.4	chr13_36846075_-	4348	-1665.30	-1665.30	-1707.30
ADediting_395069	ENST00000379826.4	chr13_36846076_-	4347	-1669.00	-1665.30	-1707.30
ADediting_395070	ENST00000379826.4	chr13_36846081_-	4342	-1664.40	-1665.30	-1707.30
ADediting_395071	ENST00000379826.4	chr13_36846089_-	4334	-1664.90	-1665.30	-1707.30
ADediting_395072	ENST00000379826.4	chr13_36846092_-	4331	-1664.60	-1665.30	-1707.30
ADediting_395073	ENST00000379826.4	chr13_36846098_-	4325	-1664.90	-1665.30	-1707.30
ADediting_395074	ENST00000379826.4	chr13_36846100_-	4323	-1671.50	-1665.30	-1707.30
ADediting_395075	ENST00000379826.4	chr13_36846114_-	4309	-1664.60	-1665.30	-1707.30
ADediting_395076	ENST00000379826.4	chr13_36846224_-	4199	-1665.30	-1665.30	-1707.30
ADediting_395077	ENST00000379826.4	chr13_36846226_-	4197	-1665.00	-1665.30	-1707.30
ADediting_395078	ENST00000379826.4	chr13_36846238_-	4185	-1665.00	-1665.30	-1707.30
ADediting_395079	ENST00000379826.4	chr13_36846239_-	4184	-1665.40	-1665.30	-1707.30
ADediting_395080	ENST00000379826.4	chr13_36846240_-	4183	-1665.00	-1665.30	-1707.30
ADediting_395081	ENST00000379826.4	chr13_36846248_-	4175	-1669.00	-1665.30	-1707.30
ADediting_395082	ENST00000379826.4	chr13_36846326_-	4097	-1665.30	-1665.30	-1707.30
ADediting_1616650	ENST00000379826.4	chr13_36846363_-	4060	-1666.70	-1665.30	-1707.30
ADediting_395083	ENST00000379826.4	chr13_36846366_-	4057	-1665.00	-1665.30	-1707.30
ADediting_395084	ENST00000379826.4	chr13_36846375_-	4048	-1666.80	-1665.30	-1707.30
ADediting_395085	ENST00000379826.4	chr13_36846412_-	4011	-1672.00	-1665.30	-1707.30
ADediting_395086	ENST00000379826.4	chr13_36846428_-	3995	-1664.70	-1665.30	-1707.30
ADediting_395087	ENST00000379826.4	chr13_36846442_-	3981	-1664.30	-1665.30	-1707.30
ADediting_395088	ENST00000379826.4	chr13_36846444_-	3979	-1665.30	-1665.30	-1707.30

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SMAD9

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
FP	ADediting_395066	chr13_36846052_-	0.366003181498519	-0.0681579221113147	0.102779665042686	-0.122689877180809	2.44939563830727e-06	0.344742132014983
TCX	ADediting_395074	chr13_36846100_-	0.24482681899053	0.0955409392427432	0.00117968198399365	-0.262389577059936	1.89820563102458e-05	0.341479820549415
CER	ADediting_395078	chr13_36846238_-	0.0506706108876969	0.159874101420922	0.872345433506247	-0.0132295655078743	2.8956049351433e-05	0.334339048305468

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	7.61599947112359e-22	0.509103961937218	6.04789751261348e-13	0.393844646136302	2.32113292138122e-17	0.456468591257708
AC	4.77890489135263e-41	0.718878182033538	6.98433145016547e-23	0.569370889252366	2.16550734647533e-19	0.528524365838311
PCC	2.62401806115527e-16	0.547140662426047	5.87460729945605e-12	0.471384437309811	2.93405297476801e-19	0.589476315057521
CER	0.0405322427067451	0.167459637588558	0.00082052006690797	0.270338298567703	1.44646047214587e-14	0.574820551533678
TCX	1.55943650038202e-06	0.380527323907522	0.511614740949257	-0.0540013741232512	4.44770930298609e-28	0.747484326082038
FP	2.29326844508414e-10	0.452443780845033	7.59440262434369e-09	0.41614970862333	8.2876799475259e-15	0.539092705763458
IFG	0.130809999341272	0.310553555851223	0.232644718480476	0.24765284121134	4.69137820683154e-05	0.721526480436205
PG	6.57638917008911e-23	0.640994154854395	3.02044389369851e-11	0.462483316838828	0.00227437122949763	0.222461149645939
STG	0.0159137589479728	0.262355012608667	0.276624885117599	0.120072247399126	0.000263225379887257	0.388223387132867

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Relation with AD stages for SMAD9

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
TCX	ADediting_395079	chr13_36846239_-	0.00167999167355036	0.301582158428357
IFG	ADediting_395062	chr13_36846017_-	0.0142153594059248	-0.484047076971604

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
CER	9.54284826099126e-09	0.517784038836908
TCX	9.5111243616034e-12	0.601167649509284

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RelatedDrugs for SMAD9

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SMAD9

Diseases associated with this gene.
(DisGeNet 4.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SMAD9	C2973725	Pulmonary arterial hypertension	7	GENOMICS_ENGLAND
SMAD9	C3203102	Idiopathic pulmonary arterial hypertension	7	CTD_human;GENOMICS_ENGLAND
SMAD9	C0017185	Gastrointestinal Neoplasms	1	GENOMICS_ENGLAND
SMAD9	C3888002	PULMONARY HYPERTENSION, PRIMARY, 2	1	UNIPROT

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Gene summary for SMAD9

RNA A-to-I events for SMAD9

RNA editing positional annotations for SMAD9 using Annovar

RNA A-to-I editing events in the alternative splicing sites for SMAD9

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SMAD9

Protein coding region RNA A-to-I editings for SMAD9

The effects of the RNA editing to the miRNA binding sites for SMAD9

The effects of the RNA editing to the stability of the RNA structures for SMAD9

Relation with ADAR for SMAD9

Relation with AD stages for SMAD9

RelatedDrugs for SMAD9

RelatedDiseases for SMAD9

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene