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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for RASA4CP |
 Gene summary |
| Gene information | Gene symbol | RASA4CP | Gene ID | 401331 |
| Gene name | RAS p21 protein activator 4C, pseudogene | |
| Synonyms | RASA4P | |
| Cytomap | 7p13 | |
| Type of gene | pseudo | |
| Description | RAS p21 protein activator 4 pseudogene | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for RASA4CP |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1332726(44026991, -), ADediting_1332727(44027019, -), ADediting_1332728(44027039, -), ADediting_1332729(44027043, -), ADediting_1332730(44027044, -), ADediting_1332731(44027066, -), ADediting_1332732(44027148, -), ADediting_1332733(44027160, -), ADediting_1332734(44027242, -), ADediting_1332735(44027257, -), ADediting_1332736(44027283, -), ADediting_1332737(44027293, -), ADediting_1332738(44027305, -), ADediting_1332739(44027319, -), ADediting_1332740(44027322, -), ADediting_1332741(44027329, -), ADediting_1332742(44027392, -), ADediting_1332743(44027398, -), ADediting_1332744(44027400, -), ADediting_1332745(44027404, -), ADediting_1332746(44031253, -), ADediting_1332747(44031254, -), ADediting_1332748(44031262, -), ADediting_1332749(44031271, -), ADediting_1332750(44031282, -), ADediting_1332751(44031283, -), ADediting_1332752(44031291, -), ADediting_1332753(44031299, -), ADediting_1332754(44031300, -), ADediting_1332755(44031310, -), ADediting_1332756(44031324, -), ADediting_1332757(44031350, -), ADediting_1332758(44031357, -), ADediting_1332759(44031366, -), ADediting_1332760(44031386, -), ADediting_1332761(44031390, -), ADediting_1332762(44031391, -), ADediting_1332763(44031414, -), ADediting_1332764(44031426, -), ADediting_1332765(44031456, -), ADediting_1332766(44031457, -), ADediting_1332767(44031465, -), ADediting_1332768(44031852, -), ADediting_1332769(44031895, -), ADediting_1332770(44031904, -), ADediting_1332771(44031915, -), ADediting_1332772(44031967, -), ADediting_1332773(44031969, -), ADediting_1332774(44031978, -), ADediting_1332775(44032034, -), ADediting_1332776(44032039, -), ADediting_1332777(44032077, -), ADediting_1332778(44032503, -), ADediting_1332779(44032517, -), ADediting_1332780(44032530, -), ADediting_1332781(44032538, -), ADediting_1332782(44032544, -), ADediting_1332783(44032566, -), ADediting_1332784(44032570, -), ADediting_1332785(44032584, -), ADediting_1332786(44032598, -), ADediting_1332787(44032618, -), ADediting_1332788(44032623, -), ADediting_1332789(44032637, -), ADediting_1332790(44032777, -), ADediting_1332791(44032778, -), ADediting_1332792(44032804, -), ADediting_1332793(44032811, -), ADediting_1332794(44032818, -), ADediting_1332795(44032830, -), ADediting_1332796(44032856, -), ADediting_1332797(44032941, -), ADediting_1332798(44032972, -), ADediting_1332799(44033568, -), ADediting_1332800(44033569, -), ADediting_1332801(44033575, -), ADediting_1332802(44033589, -), ADediting_1332803(44033594, -), ADediting_1332804(44033604, -), ADediting_1332805(44033632, -), ADediting_1332806(44033743, -), ADediting_1332807(44033748, -), ADediting_1332808(44033765, -), ADediting_1332809(44033775, -), ADediting_1332810(44033786, -), ADediting_1332811(44033800, -), ADediting_1332812(44033804, -), ADediting_1332813(44033805, -), ADediting_1332814(44033818, -), ADediting_1332815(44033825, -), ADediting_1332816(44033835, -), ADediting_1332817(44033843, -), ADediting_1332818(44033873, -), ADediting_1332819(44037237, -), ADediting_1332820(44037341, -), ADediting_1332821(44037390, -), ADediting_1332822(44037414, -), ADediting_1332823(44038421, -), ADediting_1332824(44038430, -), ADediting_1587503(44031318, -), ADediting_1587504(44031360, -), ADediting_1587505(44031362, -), ADediting_1587506(44031363, -), ADediting_1587507(44031830, -), ADediting_1587508(44032854, -), ADediting_1587509(44033527, -), ADediting_1587510(44033778, -), |
Top |
RNA editing positional annotations for RASA4CP using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1332726 | chr7_44026991_- | ncRNA_exonic |
| ADediting_1332727 | chr7_44027019_- | ncRNA_exonic |
| ADediting_1332728 | chr7_44027039_- | ncRNA_exonic |
| ADediting_1332729 | chr7_44027043_- | ncRNA_exonic |
| ADediting_1332730 | chr7_44027044_- | ncRNA_exonic |
| ADediting_1332731 | chr7_44027066_- | ncRNA_exonic |
| ADediting_1332732 | chr7_44027148_- | ncRNA_exonic |
| ADediting_1332733 | chr7_44027160_- | ncRNA_exonic |
| ADediting_1332734 | chr7_44027242_- | ncRNA_exonic |
| ADediting_1332735 | chr7_44027257_- | ncRNA_exonic |
| ADediting_1332736 | chr7_44027283_- | ncRNA_exonic |
| ADediting_1332737 | chr7_44027293_- | ncRNA_exonic |
| ADediting_1332738 | chr7_44027305_- | ncRNA_exonic |
| ADediting_1332739 | chr7_44027319_- | ncRNA_exonic |
| ADediting_1332740 | chr7_44027322_- | ncRNA_exonic |
| ADediting_1332741 | chr7_44027329_- | ncRNA_exonic |
| ADediting_1332742 | chr7_44027392_- | ncRNA_exonic |
| ADediting_1332743 | chr7_44027398_- | ncRNA_exonic |
| ADediting_1332744 | chr7_44027400_- | ncRNA_exonic |
| ADediting_1332745 | chr7_44027404_- | ncRNA_exonic |
| ADediting_1332746 | chr7_44031253_- | ncRNA_intronic |
| ADediting_1332747 | chr7_44031254_- | ncRNA_intronic |
| ADediting_1332748 | chr7_44031262_- | ncRNA_intronic |
| ADediting_1332749 | chr7_44031271_- | ncRNA_intronic |
| ADediting_1332750 | chr7_44031282_- | ncRNA_intronic |
| ADediting_1332751 | chr7_44031283_- | ncRNA_intronic |
| ADediting_1332752 | chr7_44031291_- | ncRNA_intronic |
| ADediting_1332753 | chr7_44031299_- | ncRNA_intronic |
| ADediting_1332754 | chr7_44031300_- | ncRNA_intronic |
| ADediting_1332755 | chr7_44031310_- | ncRNA_intronic |
| ADediting_1332756 | chr7_44031324_- | ncRNA_intronic |
| ADediting_1332757 | chr7_44031350_- | ncRNA_intronic |
| ADediting_1332758 | chr7_44031357_- | ncRNA_intronic |
| ADediting_1332759 | chr7_44031366_- | ncRNA_intronic |
| ADediting_1332760 | chr7_44031386_- | ncRNA_intronic |
| ADediting_1332761 | chr7_44031390_- | ncRNA_intronic |
| ADediting_1332762 | chr7_44031391_- | ncRNA_intronic |
| ADediting_1332763 | chr7_44031414_- | ncRNA_intronic |
| ADediting_1332764 | chr7_44031426_- | ncRNA_intronic |
| ADediting_1332765 | chr7_44031456_- | ncRNA_intronic |
| ADediting_1332766 | chr7_44031457_- | ncRNA_intronic |
| ADediting_1332767 | chr7_44031465_- | ncRNA_intronic |
| ADediting_1332768 | chr7_44031852_- | ncRNA_intronic |
| ADediting_1332769 | chr7_44031895_- | ncRNA_intronic |
| ADediting_1332770 | chr7_44031904_- | ncRNA_intronic |
| ADediting_1332771 | chr7_44031915_- | ncRNA_intronic |
| ADediting_1332772 | chr7_44031967_- | ncRNA_intronic |
| ADediting_1332773 | chr7_44031969_- | ncRNA_intronic |
| ADediting_1332774 | chr7_44031978_- | ncRNA_intronic |
| ADediting_1332775 | chr7_44032034_- | ncRNA_intronic |
| ADediting_1332776 | chr7_44032039_- | ncRNA_intronic |
| ADediting_1332777 | chr7_44032077_- | ncRNA_intronic |
| ADediting_1332778 | chr7_44032503_- | ncRNA_intronic |
| ADediting_1332779 | chr7_44032517_- | ncRNA_intronic |
| ADediting_1332780 | chr7_44032530_- | ncRNA_intronic |
| ADediting_1332781 | chr7_44032538_- | ncRNA_intronic |
| ADediting_1332782 | chr7_44032544_- | ncRNA_intronic |
| ADediting_1332783 | chr7_44032566_- | ncRNA_intronic |
| ADediting_1332784 | chr7_44032570_- | ncRNA_intronic |
| ADediting_1332785 | chr7_44032584_- | ncRNA_intronic |
| ADediting_1332786 | chr7_44032598_- | ncRNA_intronic |
| ADediting_1332787 | chr7_44032618_- | ncRNA_intronic |
| ADediting_1332788 | chr7_44032623_- | ncRNA_intronic |
| ADediting_1332789 | chr7_44032637_- | ncRNA_intronic |
| ADediting_1332790 | chr7_44032777_- | ncRNA_intronic |
| ADediting_1332791 | chr7_44032778_- | ncRNA_intronic |
| ADediting_1332792 | chr7_44032804_- | ncRNA_intronic |
| ADediting_1332793 | chr7_44032811_- | ncRNA_intronic |
| ADediting_1332794 | chr7_44032818_- | ncRNA_intronic |
| ADediting_1332795 | chr7_44032830_- | ncRNA_intronic |
| ADediting_1332796 | chr7_44032856_- | ncRNA_intronic |
| ADediting_1332797 | chr7_44032941_- | ncRNA_intronic |
| ADediting_1332798 | chr7_44032972_- | ncRNA_intronic |
| ADediting_1332799 | chr7_44033568_- | ncRNA_intronic |
| ADediting_1332800 | chr7_44033569_- | ncRNA_intronic |
| ADediting_1332801 | chr7_44033575_- | ncRNA_intronic |
| ADediting_1332802 | chr7_44033589_- | ncRNA_intronic |
| ADediting_1332803 | chr7_44033594_- | ncRNA_intronic |
| ADediting_1332804 | chr7_44033604_- | ncRNA_intronic |
| ADediting_1332805 | chr7_44033632_- | ncRNA_intronic |
| ADediting_1332806 | chr7_44033743_- | ncRNA_intronic |
| ADediting_1332807 | chr7_44033748_- | ncRNA_intronic |
| ADediting_1332808 | chr7_44033765_- | ncRNA_intronic |
| ADediting_1332809 | chr7_44033775_- | ncRNA_intronic |
| ADediting_1332810 | chr7_44033786_- | ncRNA_intronic |
| ADediting_1332811 | chr7_44033800_- | ncRNA_intronic |
| ADediting_1332812 | chr7_44033804_- | ncRNA_intronic |
| ADediting_1332813 | chr7_44033805_- | ncRNA_intronic |
| ADediting_1332814 | chr7_44033818_- | ncRNA_intronic |
| ADediting_1332815 | chr7_44033825_- | ncRNA_intronic |
| ADediting_1332816 | chr7_44033835_- | ncRNA_intronic |
| ADediting_1332817 | chr7_44033843_- | ncRNA_intronic |
| ADediting_1332818 | chr7_44033873_- | ncRNA_intronic |
| ADediting_1332819 | chr7_44037237_- | ncRNA_intronic |
| ADediting_1332820 | chr7_44037341_- | ncRNA_intronic |
| ADediting_1332821 | chr7_44037390_- | ncRNA_intronic |
| ADediting_1332822 | chr7_44037414_- | ncRNA_intronic |
| ADediting_1332823 | chr7_44038421_- | ncRNA_intronic |
| ADediting_1332824 | chr7_44038430_- | ncRNA_intronic |
| ADediting_1587503 | chr7_44031318_- | ncRNA_intronic |
| ADediting_1587504 | chr7_44031360_- | ncRNA_intronic |
| ADediting_1587505 | chr7_44031362_- | ncRNA_intronic |
| ADediting_1587506 | chr7_44031363_- | ncRNA_intronic |
| ADediting_1587507 | chr7_44031830_- | ncRNA_intronic |
| ADediting_1587508 | chr7_44032854_- | ncRNA_intronic |
| ADediting_1587509 | chr7_44033527_- | ncRNA_intronic |
| ADediting_1587510 | chr7_44033778_- | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1332726 | chr7_44026991_- | SINE | Alu | Name=FLAM_A |
| ADediting_1332727 | chr7_44027019_- | SINE | Alu | Name=FLAM_A |
| ADediting_1332728 | chr7_44027039_- | SINE | Alu | Name=FLAM_A |
| ADediting_1332729 | chr7_44027043_- | SINE | Alu | Name=FLAM_A |
| ADediting_1332730 | chr7_44027044_- | SINE | Alu | Name=FLAM_A |
| ADediting_1332731 | chr7_44027066_- | SINE | Alu | Name=FLAM_A |
| ADediting_1332732 | chr7_44027148_- | SINE | Alu | Name=AluSx |
| ADediting_1332733 | chr7_44027160_- | SINE | Alu | Name=AluSx |
| ADediting_1332734 | chr7_44027242_- | SINE | Alu | Name=AluSx |
| ADediting_1332735 | chr7_44027257_- | SINE | Alu | Name=AluSx |
| ADediting_1332736 | chr7_44027283_- | SINE | Alu | Name=AluSx |
| ADediting_1332737 | chr7_44027293_- | SINE | Alu | Name=AluSx |
| ADediting_1332738 | chr7_44027305_- | SINE | Alu | Name=AluSx |
| ADediting_1332739 | chr7_44027319_- | SINE | Alu | Name=AluSx |
| ADediting_1332740 | chr7_44027322_- | SINE | Alu | Name=AluSx |
| ADediting_1332741 | chr7_44027329_- | SINE | Alu | Name=AluSx |
| ADediting_1332742 | chr7_44027392_- | SINE | Alu | Name=AluSx |
| ADediting_1332743 | chr7_44027398_- | SINE | Alu | Name=AluSx |
| ADediting_1332744 | chr7_44027400_- | SINE | Alu | Name=AluSx |
| ADediting_1332745 | chr7_44027404_- | SINE | Alu | Name=AluSx |
| ADediting_1332746 | chr7_44031253_- | SINE | Alu | Name=AluY |
| ADediting_1332747 | chr7_44031254_- | SINE | Alu | Name=AluY |
| ADediting_1332748 | chr7_44031262_- | SINE | Alu | Name=AluY |
| ADediting_1332749 | chr7_44031271_- | SINE | Alu | Name=AluY |
| ADediting_1332750 | chr7_44031282_- | SINE | Alu | Name=AluY |
| ADediting_1332751 | chr7_44031283_- | SINE | Alu | Name=AluY |
| ADediting_1332752 | chr7_44031291_- | SINE | Alu | Name=AluY |
| ADediting_1332753 | chr7_44031299_- | SINE | Alu | Name=AluY |
| ADediting_1332754 | chr7_44031300_- | SINE | Alu | Name=AluY |
| ADediting_1332755 | chr7_44031310_- | SINE | Alu | Name=AluY |
| ADediting_1332756 | chr7_44031324_- | SINE | Alu | Name=AluY |
| ADediting_1332757 | chr7_44031350_- | SINE | Alu | Name=AluY |
| ADediting_1332758 | chr7_44031357_- | SINE | Alu | Name=AluY |
| ADediting_1332759 | chr7_44031366_- | SINE | Alu | Name=AluY |
| ADediting_1332760 | chr7_44031386_- | SINE | Alu | Name=AluY |
| ADediting_1332761 | chr7_44031390_- | SINE | Alu | Name=AluY |
| ADediting_1332762 | chr7_44031391_- | SINE | Alu | Name=AluY |
| ADediting_1332763 | chr7_44031414_- | SINE | Alu | Name=AluY |
| ADediting_1332764 | chr7_44031426_- | SINE | Alu | Name=AluY |
| ADediting_1332765 | chr7_44031456_- | SINE | Alu | Name=AluY |
| ADediting_1332766 | chr7_44031457_- | SINE | Alu | Name=AluY |
| ADediting_1332767 | chr7_44031465_- | SINE | Alu | Name=AluY |
| ADediting_1332768 | chr7_44031852_- | SINE | Alu | Name=AluJr |
| ADediting_1332769 | chr7_44031895_- | SINE | Alu | Name=AluJr |
| ADediting_1332770 | chr7_44031904_- | SINE | Alu | Name=AluJr |
| ADediting_1332771 | chr7_44031915_- | SINE | Alu | Name=AluJr |
| ADediting_1332772 | chr7_44031967_- | SINE | Alu | Name=AluJr |
| ADediting_1332773 | chr7_44031969_- | SINE | Alu | Name=AluJr |
| ADediting_1332774 | chr7_44031978_- | SINE | Alu | Name=AluJr |
| ADediting_1332775 | chr7_44032034_- | SINE | Alu | Name=AluJr |
| ADediting_1332776 | chr7_44032039_- | SINE | Alu | Name=AluJr |
| ADediting_1332777 | chr7_44032077_- | SINE | Alu | Name=AluJr |
| ADediting_1332778 | chr7_44032503_- | SINE | Alu | Name=AluSx |
| ADediting_1332779 | chr7_44032517_- | SINE | Alu | Name=AluSx |
| ADediting_1332780 | chr7_44032530_- | SINE | Alu | Name=AluSx |
| ADediting_1332781 | chr7_44032538_- | SINE | Alu | Name=AluSx |
| ADediting_1332782 | chr7_44032544_- | SINE | Alu | Name=AluSx |
| ADediting_1332783 | chr7_44032566_- | SINE | Alu | Name=AluSx |
| ADediting_1332784 | chr7_44032570_- | SINE | Alu | Name=AluSx |
| ADediting_1332785 | chr7_44032584_- | SINE | Alu | Name=AluSx |
| ADediting_1332786 | chr7_44032598_- | SINE | Alu | Name=AluSx |
| ADediting_1332787 | chr7_44032618_- | SINE | Alu | Name=AluSx |
| ADediting_1332788 | chr7_44032623_- | SINE | Alu | Name=AluSx |
| ADediting_1332789 | chr7_44032637_- | SINE | Alu | Name=AluSx |
| ADediting_1332790 | chr7_44032777_- | SINE | Alu | Name=AluJo |
| ADediting_1332791 | chr7_44032778_- | SINE | Alu | Name=AluJo |
| ADediting_1332792 | chr7_44032804_- | SINE | Alu | Name=AluJo |
| ADediting_1332793 | chr7_44032811_- | SINE | Alu | Name=AluJo |
| ADediting_1332794 | chr7_44032818_- | SINE | Alu | Name=AluJo |
| ADediting_1332795 | chr7_44032830_- | SINE | Alu | Name=AluJo |
| ADediting_1332796 | chr7_44032856_- | SINE | Alu | Name=AluJo |
| ADediting_1332797 | chr7_44032941_- | SINE | Alu | Name=AluJo |
| ADediting_1332798 | chr7_44032972_- | SINE | Alu | Name=AluJo |
| ADediting_1332799 | chr7_44033568_- | SINE | Alu | Name=AluSg |
| ADediting_1332800 | chr7_44033569_- | SINE | Alu | Name=AluSg |
| ADediting_1332801 | chr7_44033575_- | SINE | Alu | Name=AluSg |
| ADediting_1332802 | chr7_44033589_- | SINE | Alu | Name=AluSg |
| ADediting_1332803 | chr7_44033594_- | SINE | Alu | Name=AluSg |
| ADediting_1332804 | chr7_44033604_- | SINE | Alu | Name=AluSg |
| ADediting_1332805 | chr7_44033632_- | SINE | Alu | Name=AluSg |
| ADediting_1332806 | chr7_44033743_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332807 | chr7_44033748_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332808 | chr7_44033765_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332809 | chr7_44033775_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332810 | chr7_44033786_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332811 | chr7_44033800_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332812 | chr7_44033804_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332813 | chr7_44033805_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332814 | chr7_44033818_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332815 | chr7_44033825_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332816 | chr7_44033835_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332817 | chr7_44033843_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332818 | chr7_44033873_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332819 | chr7_44037237_- | SINE | Alu | Name=AluSp |
| ADediting_1332820 | chr7_44037341_- | SINE | Alu | Name=AluSp |
| ADediting_1332821 | chr7_44037390_- | SINE | Alu | Name=AluSp |
| ADediting_1332822 | chr7_44037414_- | SINE | Alu | Name=AluSp |
| ADediting_1332823 | chr7_44038421_- | SINE | Alu | Name=AluSx1 |
| ADediting_1332824 | chr7_44038430_- | SINE | Alu | Name=AluSx1 |
| ADediting_1587503 | chr7_44031318_- | SINE | Alu | Name=AluY |
| ADediting_1587504 | chr7_44031360_- | SINE | Alu | Name=AluY |
| ADediting_1587505 | chr7_44031362_- | SINE | Alu | Name=AluY |
| ADediting_1587506 | chr7_44031363_- | SINE | Alu | Name=AluY |
| ADediting_1587507 | chr7_44031830_- | SINE | Alu | Name=AluJr |
| ADediting_1587508 | chr7_44032854_- | SINE | Alu | Name=AluJo |
| ADediting_1587509 | chr7_44033527_- | SINE | Alu | Name=AluSg |
| ADediting_1587510 | chr7_44033778_- | SINE | Alu | Name=AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for RASA4CP |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RASA4CP |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for RASA4CP |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for RASA4CP |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1332726 | chr7_44026991_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4659a-5p | chr7 | 44026987 | 44026994 | 8mer-1a | 44026987 | 44027008 | 145 | -14.78 |
| ADediting_1332726 | chr7_44026991_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4659b-5p | chr7 | 44026987 | 44026994 | 8mer-1a | 44026987 | 44027005 | 145 | -14.91 |
| ADediting_1332726 | chr7_44026991_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4716-5p | chr7 | 44026990 | 44026996 | 7mer-m8 | 44026989 | 44027010 | 148 | -14.66 |
| ADediting_1332726 | chr7_44026991_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4776-3p | chr7 | 44026986 | 44026993 | 8mer-1a | 44026986 | 44027009 | 153 | -18.04 |
| ADediting_1332728 | chr7_44027039_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-718 | chr7 | 44027036 | 44027042 | 7mer-m8 | 44027035 | 44027055 | 141 | -26.19 |
| ADediting_1332729 | chr7_44027043_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-18a-3p | chr7 | 44027037 | 44027044 | 8mer-1a | 44027037 | 44027057 | 147 | -22.95 |
| ADediting_1332729 | chr7_44027043_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3176 | chr7 | 44027043 | 44027049 | 7mer-m8 | 44027042 | 44027061 | 144 | -17.65 |
| ADediting_1332729 | chr7_44027043_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3922-3p | chr7 | 44027043 | 44027049 | 7mer-m8 | 44027042 | 44027064 | 143 | -18.4 |
| ADediting_1332729 | chr7_44027043_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-874-3p | chr7 | 44027039 | 44027045 | 7mer-m8 | 44027038 | 44027062 | 158 | -34 |
| ADediting_1332735 | chr7_44027257_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-1207-3p | chr7 | 44027256 | 44027263 | 8mer-1a | 44027256 | 44027273 | 144 | -14.68 |
| ADediting_1332735 | chr7_44027257_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-34a-3p | chr7 | 44027254 | 44027260 | 7mer-m8 | 44027253 | 44027274 | 140 | -8.12 |
| ADediting_1332736 | chr7_44027283_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-17-3p | chr7 | 44027280 | 44027286 | 7mer-m8 | 44027279 | 44027301 | 154 | -20.36 |
| ADediting_1332737 | chr7_44027293_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4691-3p | chr7 | 44027289 | 44027295 | 7mer-m8 | 44027288 | 44027315 | 150 | -26.36 |
| ADediting_1332738 | chr7_44027305_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6089 | chr7 | 44027300 | 44027306 | 7mer-m8 | 44027299 | 44027322 | 160 | -34.6 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-1247-3p | chr7 | 44027327 | 44027333 | 7mer-m8 | 44027326 | 44027348 | 152 | -24.12 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-10a-5p | chr7 | 44027396 | 44027402 | 7mer-m8 | 44027395 | 44027415 | 142 | -12.31 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-10b-5p | chr7 | 44027396 | 44027402 | 7mer-m8 | 44027395 | 44027422 | 145 | -13.82 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-339-5p | chr7 | 44027397 | 44027403 | 7mer-m8 | 44027396 | 44027417 | 151 | -18.83 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4421 | chr7 | 44027398 | 44027404 | 7mer-m8 | 44027397 | 44027418 | 155 | -16.75 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4725-5p | chr7 | 44027395 | 44027401 | 7mer-m8 | 44027394 | 44027414 | 140 | -15.96 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-504-5p | chr7 | 44027395 | 44027401 | 7mer-m8 | 44027394 | 44027413 | 147 | -18.15 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-5699-3p | chr7 | 44027398 | 44027404 | 7mer-m8 | 44027397 | 44027418 | 141 | -16.39 |
| ADediting_1332744 | chr7_44027400_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-340-3p | chr7 | 44027398 | 44027405 | 8mer-1a | 44027398 | 44027419 | 146 | -20.13 |
| ADediting_1332744 | chr7_44027400_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6827-3p | chr7 | 44027398 | 44027405 | 8mer-1a | 44027398 | 44027418 | 140 | -14.67 |
| ADediting_1332745 | chr7_44027404_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4433b-5p | chr7 | 44027400 | 44027406 | 7mer-m8 | 44027399 | 44027419 | 140 | -10.81 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1332727 | chr7_44027019_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3176 | chr7 | 44027018 | 44027024 | 7mer-m8 | 44027017 | 44027035 | 140 | -16.14 |
| ADediting_1332727 | chr7_44027019_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6878-3p | chr7 | 44027019 | 44027025 | 7mer-m8 | 44027018 | 44027045 | 148 | -28.08 |
| ADediting_1332728 | chr7_44027039_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-5001-3p | chr7 | 44027036 | 44027043 | 8mer-1a | 44027036 | 44027056 | 148 | -19.49 |
| ADediting_1332728 | chr7_44027039_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6738-3p | chr7 | 44027036 | 44027042 | 7mer-m8 | 44027035 | 44027060 | 151 | -28.06 |
| ADediting_1332730 | chr7_44027044_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6878-3p | chr7 | 44027043 | 44027050 | 8mer-1a | 44027043 | 44027063 | 142 | -13.4 |
| ADediting_1332731 | chr7_44027066_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-520g-5p | chr7 | 44027065 | 44027071 | 7mer-m8 | 44027064 | 44027087 | 153 | -19.25 |
| ADediting_1332731 | chr7_44027066_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6503-3p | chr7 | 44027062 | 44027068 | 7mer-m8 | 44027061 | 44027082 | 149 | -20.95 |
| ADediting_1332736 | chr7_44027283_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-20b-3p | chr7 | 44027280 | 44027286 | 7mer-m8 | 44027279 | 44027301 | 153 | -18.18 |
| ADediting_1332737 | chr7_44027293_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-5690 | chr7 | 44027289 | 44027295 | 7mer-m8 | 44027288 | 44027308 | 145 | -16.75 |
| ADediting_1332738 | chr7_44027305_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4478 | chr7 | 44027301 | 44027307 | 7mer-m8 | 44027300 | 44027316 | 155 | -23.45 |
| ADediting_1332738 | chr7_44027305_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4649-3p | chr7 | 44027304 | 44027310 | 7mer-m8 | 44027303 | 44027323 | 140 | -13.83 |
| ADediting_1332738 | chr7_44027305_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-7160-5p | chr7 | 44027303 | 44027309 | 7mer-m8 | 44027302 | 44027322 | 147 | -20.03 |
| ADediting_1332739 | chr7_44027319_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-219b-3p | chr7 | 44027315 | 44027321 | 7mer-m8 | 44027314 | 44027334 | 153 | -15.53 |
| ADediting_1332739 | chr7_44027319_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-302f | chr7 | 44027316 | 44027322 | 7mer-m8 | 44027315 | 44027331 | 147 | -8.32 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3689a-3p | chr7 | 44027329 | 44027335 | 7mer-m8 | 44027328 | 44027348 | 146 | -20.25 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3689b-3p | chr7 | 44027329 | 44027335 | 7mer-m8 | 44027328 | 44027348 | 154 | -23.63 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3689c | chr7 | 44027329 | 44027335 | 7mer-m8 | 44027328 | 44027348 | 154 | -23.63 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-490-3p | chr7 | 44027325 | 44027331 | 7mer-m8 | 44027324 | 44027346 | 146 | -17.33 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6779-5p | chr7 | 44027329 | 44027335 | 7mer-m8 | 44027328 | 44027346 | 152 | -23.44 |
| ADediting_1332741 | chr7_44027329_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6780a-5p | chr7 | 44027329 | 44027335 | 7mer-m8 | 44027328 | 44027352 | 147 | -23.08 |
| ADediting_1332742 | chr7_44027392_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6864-3p | chr7 | 44027392 | 44027398 | 7mer-m8 | 44027391 | 44027412 | 153 | -17.84 |
| ADediting_1332742 | chr7_44027392_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-759 | chr7 | 44027387 | 44027393 | 7mer-m8 | 44027386 | 44027406 | 145 | -15.6 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3664-5p | chr7 | 44027396 | 44027402 | 7mer-m8 | 44027395 | 44027416 | 153 | -15.28 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4522 | chr7 | 44027395 | 44027401 | 7mer-m8 | 44027394 | 44027414 | 148 | -12.83 |
| ADediting_1332743 | chr7_44027398_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6888-3p | chr7 | 44027398 | 44027404 | 7mer-m8 | 44027397 | 44027417 | 151 | -14.96 |
| ADediting_1332744 | chr7_44027400_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-3664-5p | chr7 | 44027396 | 44027402 | 7mer-m8 | 44027395 | 44027416 | 153 | -15.28 |
| ADediting_1332744 | chr7_44027400_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-4522 | chr7 | 44027395 | 44027401 | 7mer-m8 | 44027394 | 44027414 | 148 | -12.83 |
| ADediting_1332744 | chr7_44027400_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-6888-3p | chr7 | 44027398 | 44027404 | 7mer-m8 | 44027397 | 44027417 | 151 | -14.96 |
| ADediting_1332745 | chr7_44027404_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-371b-5p | chr7 | 44027402 | 44027409 | 8mer-1a | 44027402 | 44027423 | 146 | -11.36 |
| ADediting_1332745 | chr7_44027404_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-373-5p | chr7 | 44027402 | 44027409 | 8mer-1a | 44027402 | 44027423 | 140 | -9.42 |
| ADediting_1332745 | chr7_44027404_- | ENSG00000228903.7 | ENST00000446874.5 | RASA4CP-203 | hsa-miR-616-5p | chr7 | 44027402 | 44027409 | 8mer-1a | 44027402 | 44027423 | 140 | -8.04 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for RASA4CP |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000446874.5 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1332726 | ENST00000446874.5 | chr7_44026991_- | 3153 | -1393.00 | -1393.00 | -1428.70 |
| ADediting_1332727 | ENST00000446874.5 | chr7_44027019_- | 3125 | -1395.10 | -1393.00 | -1428.70 |
| ADediting_1332728 | ENST00000446874.5 | chr7_44027039_- | 3105 | -1392.20 | -1393.00 | -1428.70 |
| ADediting_1332729 | ENST00000446874.5 | chr7_44027043_- | 3101 | -1392.60 | -1393.00 | -1428.70 |
| ADediting_1332730 | ENST00000446874.5 | chr7_44027044_- | 3100 | -1396.40 | -1393.00 | -1428.70 |
| ADediting_1332731 | ENST00000446874.5 | chr7_44027066_- | 3078 | -1392.70 | -1393.00 | -1428.70 |
| ADediting_1332732 | ENST00000446874.5 | chr7_44027148_- | 2996 | -1394.40 | -1393.00 | -1428.70 |
| ADediting_1332733 | ENST00000446874.5 | chr7_44027160_- | 2984 | -1398.20 | -1393.00 | -1428.70 |
| ADediting_1332734 | ENST00000446874.5 | chr7_44027242_- | 2902 | -1393.60 | -1393.00 | -1428.70 |
| ADediting_1332735 | ENST00000446874.5 | chr7_44027257_- | 2887 | -1393.30 | -1393.00 | -1428.70 |
| ADediting_1332736 | ENST00000446874.5 | chr7_44027283_- | 2861 | -1392.70 | -1393.00 | -1428.70 |
| ADediting_1332737 | ENST00000446874.5 | chr7_44027293_- | 2851 | -1392.70 | -1393.00 | -1428.70 |
| ADediting_1332738 | ENST00000446874.5 | chr7_44027305_- | 2839 | -1396.60 | -1393.00 | -1428.70 |
| ADediting_1332739 | ENST00000446874.5 | chr7_44027319_- | 2825 | -1396.90 | -1393.00 | -1428.70 |
| ADediting_1332740 | ENST00000446874.5 | chr7_44027322_- | 2822 | -1392.70 | -1393.00 | -1428.70 |
| ADediting_1332741 | ENST00000446874.5 | chr7_44027329_- | 2815 | -1395.10 | -1393.00 | -1428.70 |
| ADediting_1332742 | ENST00000446874.5 | chr7_44027392_- | 2752 | -1396.00 | -1393.00 | -1428.70 |
| ADediting_1332743 | ENST00000446874.5 | chr7_44027398_- | 2746 | -1394.00 | -1393.00 | -1428.70 |
| ADediting_1332744 | ENST00000446874.5 | chr7_44027400_- | 2744 | -1393.00 | -1393.00 | -1428.70 |
| ADediting_1332745 | ENST00000446874.5 | chr7_44027404_- | 2740 | -1396.80 | -1393.00 | -1428.70 |
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Relation with ADAR for RASA4CP |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_1332730 | chr7_44027044_- | 0.0184866731397018 | 0.192155457839542 | 1.37079712664193e-05 | 0.346867270282759 | 0.00886063686418075 | -0.21303175505322 |
| CER | ADediting_1332736 | chr7_44027283_- | 0.0267016645607379 | 0.18094110884256 | 2.60897869906557e-05 | 0.336118042135116 | 0.307372617774177 | 0.083898742075658 |
| TCX | ADediting_1332738 | chr7_44027305_- | 0.03204953261211 | 0.175149702489803 | 2.05538859251553e-06 | 0.37645552610096 | 0.0502558917342192 | -0.160158393158726 |
| DLPFC | ADediting_1332742 | chr7_44027392_- | 1.04531716586121e-07 | 0.296459658754487 | 2.68779576843044e-11 | 0.366640205903362 | 0.00359878973462162 | 0.164886027164411 |
| CER | ADediting_1332742 | chr7_44027392_- | 0.0156680265377678 | 0.19702131247599 | 6.88194899914536e-05 | 0.319123035551919 | 0.0364217983472854 | 0.17099655471188 |
| DLPFC | ADediting_1332744 | chr7_44027400_- | 1.217902668854e-08 | 0.316501741019131 | 2.45301431465248e-12 | 0.384096392853831 | 0.00581308914659811 | 0.156319299133145 |
| DLPFC | ADediting_1332746 | chr7_44031253_- | 0.00200690222791442 | 0.174808560120343 | 0.00560802006173985 | 0.156975235299428 | 3.87943987184367e-08 | 0.305887857431321 |
| DLPFC | ADediting_1332747 | chr7_44031254_- | 0.00160305051043094 | 0.178491690000649 | 0.00549648751084408 | 0.157341079214204 | 3.29485208040142e-11 | 0.36510583328474 |
| CER | ADediting_1332747 | chr7_44031254_- | 0.0329501416853514 | 0.174256615014668 | 5.67458319496671e-05 | 0.322584303001206 | 0.00392759751336456 | 0.234147308066041 |
| DLPFC | ADediting_1332749 | chr7_44031271_- | 0.00355291447605007 | 0.165109780178417 | 0.128781108655175 | 0.086456860589398 | 1.18820339119545e-14 | 0.419612177936305 |
| DLPFC | ADediting_1332760 | chr7_44031386_- | 0.00690545561367198 | 0.153140114101558 | 0.263258629950528 | 0.063732004478208 | 5.11104115875679e-13 | 0.394995075076329 |
| DLPFC | ADediting_1332763 | chr7_44031414_- | 0.00182691268305946 | 0.176357483689597 | 0.0619888883146948 | 0.106132164575228 | 3.1765871648051e-15 | 0.427788896738114 |
| DLPFC | ADediting_1332764 | chr7_44031426_- | 0.0218447630138948 | 0.130207938808572 | 0.221915929882801 | 0.0695706254369535 | 2.46252218335305e-11 | 0.367297269034447 |
| DLPFC | ADediting_1332773 | chr7_44031969_- | 0.0394202481481383 | 0.117057652730618 | 0.755141450038591 | -0.0177833061630157 | 1.94130145913817e-15 | 0.430785317817097 |
| CER | ADediting_1332773 | chr7_44031969_- | 0.010561085752447 | 0.208218132669799 | 1.89996587797659e-05 | 0.341464337354219 | 0.988416752372715 | -0.00119538588182181 |
| CER | ADediting_1332780 | chr7_44032530_- | 0.0148296977551322 | 0.198615708238642 | 7.28664960291746e-05 | 0.31808960558665 | 0.11582850405616 | 0.128938318971836 |
| DLPFC | ADediting_1332783 | chr7_44032566_- | 0.488877025012115 | 0.0394524847248624 | 0.210358814987422 | -0.0713392485848885 | 1.17041281884079e-13 | 0.404884766607061 |
| DLPFC | ADediting_1332789 | chr7_44032637_- | 0.978613135869074 | -0.00152874821587948 | 0.106791673583435 | -0.0917772576179343 | 7.17596392825148e-09 | 0.321212799169562 |
| DLPFC | ADediting_1332790 | chr7_44032777_- | 0.315119956053168 | 0.0572382961905845 | 0.142675033439612 | -0.083449462695985 | 1.10005033406027e-17 | 0.460595249370552 |
| DLPFC | ADediting_1332792 | chr7_44032804_- | 0.605718552102221 | 0.0294304192179892 | 0.439160667290681 | -0.0440949284286907 | 1.99319256673293e-13 | 0.401350682604309 |
| DLPFC | ADediting_1332793 | chr7_44032811_- | 0.631679311082006 | 0.0273314020522484 | 0.594418803616546 | -0.0303564258013187 | 2.25723253417452e-10 | 0.350187142056376 |
| CER | ADediting_1332794 | chr7_44032818_- | 0.135371733951653 | 0.122488442952149 | 2.43668061312078e-05 | 0.337278208173089 | 0.117194135049726 | 0.128461319146424 |
| CER | ADediting_1332797 | chr7_44032941_- | 0.0357772479835733 | 0.17158136185681 | 2.35644465329846e-05 | 0.337845083775569 | 0.0796921940193501 | 0.143547799663208 |
| CER | ADediting_1332798 | chr7_44032972_- | 0.0235158194137436 | 0.184881671537591 | 1.64006592940039e-05 | 0.34391132920569 | 0.220809632812318 | 0.100557654064251 |
| CER | ADediting_1332799 | chr7_44033568_- | 0.0783375358984646 | 0.144191361146263 | 7.95368885980152e-05 | 0.316498133506305 | 0.00171553103807961 | 0.25392820770294 |
| CER | ADediting_1332801 | chr7_44033575_- | 0.0463480300413766 | 0.16293759549273 | 3.15739634486193e-06 | 0.370014059214944 | 0.00102680632562113 | 0.265456767531742 |
| CER | ADediting_1332804 | chr7_44033604_- | 0.0150929356532267 | 0.19810678065324 | 2.64009980951332e-06 | 0.372715770901545 | 0.000439760978327493 | 0.28345987490645 |
| CER | ADediting_1332805 | chr7_44033632_- | 0.0495025063367348 | 0.160679859802675 | 5.67417209065023e-06 | 0.360988266451195 | 0.00594745954205337 | 0.223610238865448 |
| CER | ADediting_1332807 | chr7_44033748_- | 0.0527078618620362 | 0.158504935102159 | 9.01451969067314e-06 | 0.353661665009424 | 0.0532639151346255 | 0.158138850457377 |
| DLPFC | ADediting_1332808 | chr7_44033765_- | 0.281852275514952 | 0.0613123824011978 | 0.387346867364532 | -0.0492660292093651 | 5.40332287730757e-14 | 0.409942378347051 |
| DLPFC | ADediting_1332809 | chr7_44033775_- | 0.013243057374807 | 0.140562186216765 | 0.682949737313032 | 0.0232888400374337 | 1.56894669487408e-13 | 0.402944620523858 |
| CER | ADediting_1332809 | chr7_44033775_- | 0.0280522288430087 | 0.179391166006718 | 4.3039862488122e-06 | 0.365277976775831 | 0.0386812893476017 | 0.169013096543374 |
| CER | ADediting_1332810 | chr7_44033786_- | 0.211721386560489 | 0.102556690729645 | 1.86463779628451e-05 | 0.341777704367267 | 0.175956822115776 | 0.111084216995436 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.75756734974611e-29 | 0.580205789540277 | 1.24289554116359e-32 | 0.607310949751791 | 1.59407292052477e-17 | 0.458552236778928 |
| AC | 8.65672382047119e-24 | 0.579118744851788 | 6.1950217221875e-23 | 0.569939632052434 | 3.84619428529146e-12 | 0.420661986138635 |
| PCC | 1.65537443286784e-16 | 0.550209260560405 | 1.69748667272924e-19 | 0.592633462985582 | 0.000299256666140236 | 0.258865617637763 |
| CER | 9.81127419090044e-15 | 0.577820662914625 | 3.44657489969871e-15 | 0.585756757881285 | 7.99839821948567e-07 | 0.390151461949777 |
| TCX | 5.06363596859779e-14 | 0.564923424525847 | 1.03234009259765e-10 | 0.496535377707945 | 0.434600327478581 | 0.0642680943575135 |
| FP | 5.97471710728297e-05 | 0.296156943188058 | 0.0207220139082292 | 0.173274794557325 | 1.50709600273713e-09 | 0.433453314715076 |
| IFG | 0.0182435590954313 | 0.468238867455911 | 0.00358663308080315 | 0.560203077867914 | 0.00953036369695897 | 0.507974046766025 |
| STG | 5.29546349811882e-06 | 0.473845421850789 | 0.00978233945296423 | 0.280397853418897 | 2.91206081308903e-09 | 0.592446299929969 |
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Relation with AD stages for RASA4CP |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1332797 | chr7_44032941_- | 0.000221066178263137 | 0.348278422825443 |
| CER | ADediting_1332801 | chr7_44033575_- | 6.56719015864901e-05 | 0.374369259800505 |
| CER | ADediting_1332805 | chr7_44033632_- | 0.000498162550121362 | 0.329459896873182 |
| CER | ADediting_1332807 | chr7_44033748_- | 0.000560059276075881 | 0.326646128666939 |
| CER | ADediting_1332809 | chr7_44033775_- | 0.00129230564685991 | 0.305730457698857 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.72867185609754e-05 | 0.391950903347957 |
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RelatedDrugs for RASA4CP |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RASA4CP |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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