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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for IFRD1 |
 Gene summary |
| Gene information | Gene symbol | IFRD1 | Gene ID | 3475 |
| Gene name | interferon related developmental regulator 1 | |
| Synonyms | PC4|TIS7 | |
| Cytomap | 7q31.1 | |
| Type of gene | protein-coding | |
| Description | interferon-related developmental regulator 112-O-tetradecanoylphorbol-13-acetate-induced sequence 7TPA induced sequence 7nerve growth factor-inducible protein PC4pheochromocytoma cell-4 | |
| Modification date | 20200313 | |
| UniProtAcc | O00458, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for IFRD1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1297573(112451338, +), ADediting_1297574(112451399, +), ADediting_1297575(112453645, +), ADediting_1297576(112454250, +), ADediting_1297577(112454273, +), ADediting_1297578(112454310, +), ADediting_1297579(112454318, +), ADediting_1297580(112454332, +), ADediting_1297581(112454335, +), ADediting_1297582(112454928, +), ADediting_1297583(112454941, +), ADediting_1297584(112454946, +), ADediting_1297585(112454947, +), ADediting_1297586(112454960, +), ADediting_1297587(112454966, +), ADediting_1297588(112454984, +), ADediting_1297589(112454993, +), ADediting_1297590(112454996, +), ADediting_1297591(112455006, +), ADediting_1297592(112455012, +), ADediting_1297593(112455044, +), ADediting_1297594(112455047, +), ADediting_1297595(112455077, +), ADediting_1297596(112455084, +), ADediting_1297597(112455116, +), ADediting_1297598(112455125, +), ADediting_1297599(112455126, +), ADediting_1297600(112455132, +), ADediting_1297601(112455138, +), ADediting_1297602(112455212, +), ADediting_1297603(112455228, +), ADediting_1297604(112455229, +), ADediting_1297605(112455234, +), ADediting_1297606(112455272, +), ADediting_1297607(112455286, +), ADediting_1297608(112455292, +), ADediting_1297609(112455296, +), ADediting_1297610(112455365, +), ADediting_1297611(112455374, +), ADediting_1297612(112455378, +), ADediting_1297613(112455391, +), ADediting_1297614(112455405, +), ADediting_1297615(112455406, +), ADediting_1297616(112455410, +), ADediting_1297617(112455424, +), ADediting_1297618(112455426, +), ADediting_1297619(112455434, +), ADediting_1297620(112455435, +), ADediting_1297621(112455459, +), ADediting_1297622(112459082, +), ADediting_1297623(112459084, +), ADediting_1297624(112459165, +), ADediting_1297625(112460303, +), ADediting_1297626(112473518, +), ADediting_1297627(112476404, +), ADediting_1297628(112476407, +), ADediting_1297629(112476413, +), ADediting_1297630(112476476, +), ADediting_1297631(112476560, +), ADediting_1297632(112476561, +), ADediting_1297633(112476579, +), ADediting_1297634(112476588, +), ADediting_1297635(112477259, +), ADediting_1297636(112477340, +), ADediting_1297637(112477371, +), ADediting_1297638(112477379, +), ADediting_1297639(112477434, +), ADediting_1297640(112477473, +), ADediting_1297641(112479225, +), ADediting_1297642(112479297, +), ADediting_1297643(112479303, +), ADediting_1297644(112479337, +), ADediting_1297645(112479340, +), ADediting_1297646(112479366, +), ADediting_1297647(112479391, +), ADediting_1297648(112479395, +), ADediting_1297649(112479419, +), ADediting_1297650(112480115, +), ADediting_1297651(112480122, +), ADediting_1297652(112480123, +), ADediting_1297653(112480168, +), ADediting_1297654(112480176, +), ADediting_1297655(112480177, +), ADediting_1297656(112480188, +), ADediting_1297657(112480192, +), ADediting_1297658(112480202, +), ADediting_1297659(112480231, +), ADediting_1297660(112480235, +), ADediting_1297661(112480239, +), ADediting_1297662(112480251, +), ADediting_1297663(112480257, +), ADediting_1297664(112480258, +), ADediting_1297665(112480263, +), ADediting_1297666(112480267, +), ADediting_1297667(112480314, +), ADediting_1585570(112455364, +), ADediting_1585571(112459104, +), ADediting_1585572(112459117, +), ADediting_1585573(112459139, +), ADediting_1585574(112460312, +), ADediting_1585575(112476574, +), ADediting_1585576(112476587, +), ADediting_1585577(112476589, +), ADediting_1585578(112477222, +), ADediting_1585579(112477256, +), ADediting_1585580(112477301, +), ADediting_1585581(112477373, +), ADediting_1585582(112477408, +), ADediting_1585583(112477433, +), ADediting_1585584(112477460, +), ADediting_1585585(112479258, +), ADediting_1585586(112479323, +), ADediting_1585587(112479324, +), ADediting_1585588(112479429, +), ADediting_1585589(112479431, +), ADediting_1585590(112480201, +), ADediting_1585591(112480247, +), ADediting_1585592(112480325, +), ADediting_1585593(112480330, +), ADediting_1663759(112455073, +), ADediting_1663760(112455275, +), ADediting_1663761(112455370, +), ADediting_1663762(112455430, +), ADediting_1663763(112455445, +), ADediting_1663764(112460308, +), |
Top |
RNA editing positional annotations for IFRD1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1297573 | chr7_112451338_+ | intronic |
| ADediting_1297574 | chr7_112451399_+ | intronic |
| ADediting_1297575 | chr7_112453645_+ | intronic |
| ADediting_1297576 | chr7_112454250_+ | intronic |
| ADediting_1297577 | chr7_112454273_+ | intronic |
| ADediting_1297578 | chr7_112454310_+ | intronic |
| ADediting_1297579 | chr7_112454318_+ | intronic |
| ADediting_1297580 | chr7_112454332_+ | intronic |
| ADediting_1297581 | chr7_112454335_+ | intronic |
| ADediting_1297582 | chr7_112454928_+ | intronic |
| ADediting_1297583 | chr7_112454941_+ | intronic |
| ADediting_1297584 | chr7_112454946_+ | intronic |
| ADediting_1297585 | chr7_112454947_+ | intronic |
| ADediting_1297586 | chr7_112454960_+ | intronic |
| ADediting_1297587 | chr7_112454966_+ | intronic |
| ADediting_1297588 | chr7_112454984_+ | intronic |
| ADediting_1297589 | chr7_112454993_+ | intronic |
| ADediting_1297590 | chr7_112454996_+ | intronic |
| ADediting_1297591 | chr7_112455006_+ | intronic |
| ADediting_1297592 | chr7_112455012_+ | intronic |
| ADediting_1297593 | chr7_112455044_+ | intronic |
| ADediting_1297594 | chr7_112455047_+ | intronic |
| ADediting_1297595 | chr7_112455077_+ | intronic |
| ADediting_1297596 | chr7_112455084_+ | intronic |
| ADediting_1297597 | chr7_112455116_+ | intronic |
| ADediting_1297598 | chr7_112455125_+ | intronic |
| ADediting_1297599 | chr7_112455126_+ | intronic |
| ADediting_1297600 | chr7_112455132_+ | intronic |
| ADediting_1297601 | chr7_112455138_+ | intronic |
| ADediting_1297602 | chr7_112455212_+ | intronic |
| ADediting_1297603 | chr7_112455228_+ | intronic |
| ADediting_1297604 | chr7_112455229_+ | intronic |
| ADediting_1297605 | chr7_112455234_+ | intronic |
| ADediting_1297606 | chr7_112455272_+ | intronic |
| ADediting_1297607 | chr7_112455286_+ | intronic |
| ADediting_1297608 | chr7_112455292_+ | intronic |
| ADediting_1297609 | chr7_112455296_+ | intronic |
| ADediting_1297610 | chr7_112455365_+ | intronic |
| ADediting_1297611 | chr7_112455374_+ | intronic |
| ADediting_1297612 | chr7_112455378_+ | intronic |
| ADediting_1297613 | chr7_112455391_+ | intronic |
| ADediting_1297614 | chr7_112455405_+ | intronic |
| ADediting_1297615 | chr7_112455406_+ | intronic |
| ADediting_1297616 | chr7_112455410_+ | intronic |
| ADediting_1297617 | chr7_112455424_+ | intronic |
| ADediting_1297618 | chr7_112455426_+ | intronic |
| ADediting_1297619 | chr7_112455434_+ | intronic |
| ADediting_1297620 | chr7_112455435_+ | intronic |
| ADediting_1297621 | chr7_112455459_+ | intronic |
| ADediting_1297622 | chr7_112459082_+ | intronic |
| ADediting_1297623 | chr7_112459084_+ | intronic |
| ADediting_1297624 | chr7_112459165_+ | intronic |
| ADediting_1297625 | chr7_112460303_+ | intronic |
| ADediting_1297626 | chr7_112473518_+ | intronic |
| ADediting_1297627 | chr7_112476404_+ | UTR3 |
| ADediting_1297628 | chr7_112476407_+ | UTR3 |
| ADediting_1297629 | chr7_112476413_+ | UTR3 |
| ADediting_1297630 | chr7_112476476_+ | UTR3 |
| ADediting_1297631 | chr7_112476560_+ | UTR3 |
| ADediting_1297632 | chr7_112476561_+ | UTR3 |
| ADediting_1297633 | chr7_112476579_+ | UTR3 |
| ADediting_1297634 | chr7_112476588_+ | UTR3 |
| ADediting_1297635 | chr7_112477259_+ | intronic |
| ADediting_1297636 | chr7_112477340_+ | intronic |
| ADediting_1297637 | chr7_112477371_+ | intronic |
| ADediting_1297638 | chr7_112477379_+ | intronic |
| ADediting_1297639 | chr7_112477434_+ | intronic |
| ADediting_1297640 | chr7_112477473_+ | intronic |
| ADediting_1297641 | chr7_112479225_+ | intronic |
| ADediting_1297642 | chr7_112479297_+ | intronic |
| ADediting_1297643 | chr7_112479303_+ | intronic |
| ADediting_1297644 | chr7_112479337_+ | intronic |
| ADediting_1297645 | chr7_112479340_+ | intronic |
| ADediting_1297646 | chr7_112479366_+ | intronic |
| ADediting_1297647 | chr7_112479391_+ | intronic |
| ADediting_1297648 | chr7_112479395_+ | intronic |
| ADediting_1297649 | chr7_112479419_+ | intronic |
| ADediting_1297650 | chr7_112480115_+ | intronic |
| ADediting_1297651 | chr7_112480122_+ | intronic |
| ADediting_1297652 | chr7_112480123_+ | intronic |
| ADediting_1297653 | chr7_112480168_+ | intronic |
| ADediting_1297654 | chr7_112480176_+ | intronic |
| ADediting_1297655 | chr7_112480177_+ | intronic |
| ADediting_1297656 | chr7_112480188_+ | intronic |
| ADediting_1297657 | chr7_112480192_+ | intronic |
| ADediting_1297658 | chr7_112480202_+ | intronic |
| ADediting_1297659 | chr7_112480231_+ | intronic |
| ADediting_1297660 | chr7_112480235_+ | intronic |
| ADediting_1297661 | chr7_112480239_+ | intronic |
| ADediting_1297662 | chr7_112480251_+ | intronic |
| ADediting_1297663 | chr7_112480257_+ | intronic |
| ADediting_1297664 | chr7_112480258_+ | intronic |
| ADediting_1297665 | chr7_112480263_+ | intronic |
| ADediting_1297666 | chr7_112480267_+ | intronic |
| ADediting_1297667 | chr7_112480314_+ | intronic |
| ADediting_1585570 | chr7_112455364_+ | intronic |
| ADediting_1585571 | chr7_112459104_+ | intronic |
| ADediting_1585572 | chr7_112459117_+ | intronic |
| ADediting_1585573 | chr7_112459139_+ | intronic |
| ADediting_1585574 | chr7_112460312_+ | intronic |
| ADediting_1585575 | chr7_112476574_+ | UTR3 |
| ADediting_1585576 | chr7_112476587_+ | UTR3 |
| ADediting_1585577 | chr7_112476589_+ | UTR3 |
| ADediting_1585578 | chr7_112477222_+ | intronic |
| ADediting_1585579 | chr7_112477256_+ | intronic |
| ADediting_1585580 | chr7_112477301_+ | intronic |
| ADediting_1585581 | chr7_112477373_+ | intronic |
| ADediting_1585582 | chr7_112477408_+ | intronic |
| ADediting_1585583 | chr7_112477433_+ | intronic |
| ADediting_1585584 | chr7_112477460_+ | intronic |
| ADediting_1585585 | chr7_112479258_+ | intronic |
| ADediting_1585586 | chr7_112479323_+ | intronic |
| ADediting_1585587 | chr7_112479324_+ | intronic |
| ADediting_1585588 | chr7_112479429_+ | intronic |
| ADediting_1585589 | chr7_112479431_+ | intronic |
| ADediting_1585590 | chr7_112480201_+ | intronic |
| ADediting_1585591 | chr7_112480247_+ | intronic |
| ADediting_1585592 | chr7_112480325_+ | intronic |
| ADediting_1585593 | chr7_112480330_+ | intronic |
| ADediting_1663759 | chr7_112455073_+ | intronic |
| ADediting_1663760 | chr7_112455275_+ | intronic |
| ADediting_1663761 | chr7_112455370_+ | intronic |
| ADediting_1663762 | chr7_112455430_+ | intronic |
| ADediting_1663763 | chr7_112455445_+ | intronic |
| ADediting_1663764 | chr7_112460308_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1297576 | chr7_112454250_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1297577 | chr7_112454273_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1297578 | chr7_112454310_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1297579 | chr7_112454318_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1297580 | chr7_112454332_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1297581 | chr7_112454335_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1297582 | chr7_112454928_+ | SINE | Alu | Name=AluSz |
| ADediting_1297583 | chr7_112454941_+ | SINE | Alu | Name=AluSz |
| ADediting_1297584 | chr7_112454946_+ | SINE | Alu | Name=AluSz |
| ADediting_1297585 | chr7_112454947_+ | SINE | Alu | Name=AluSz |
| ADediting_1297586 | chr7_112454960_+ | SINE | Alu | Name=AluSz |
| ADediting_1297587 | chr7_112454966_+ | SINE | Alu | Name=AluSz |
| ADediting_1297588 | chr7_112454984_+ | SINE | Alu | Name=AluSz |
| ADediting_1297589 | chr7_112454993_+ | SINE | Alu | Name=AluSz |
| ADediting_1297590 | chr7_112454996_+ | SINE | Alu | Name=AluSz |
| ADediting_1297591 | chr7_112455006_+ | SINE | Alu | Name=AluSz |
| ADediting_1297592 | chr7_112455012_+ | SINE | Alu | Name=AluSz |
| ADediting_1297593 | chr7_112455044_+ | SINE | Alu | Name=AluSz |
| ADediting_1297594 | chr7_112455047_+ | SINE | Alu | Name=AluSz |
| ADediting_1297595 | chr7_112455077_+ | SINE | Alu | Name=AluSz |
| ADediting_1297596 | chr7_112455084_+ | SINE | Alu | Name=AluSz |
| ADediting_1297597 | chr7_112455116_+ | SINE | Alu | Name=AluSz |
| ADediting_1297598 | chr7_112455125_+ | SINE | Alu | Name=AluSz |
| ADediting_1297599 | chr7_112455126_+ | SINE | Alu | Name=AluSz |
| ADediting_1297600 | chr7_112455132_+ | SINE | Alu | Name=AluSz |
| ADediting_1297601 | chr7_112455138_+ | SINE | Alu | Name=AluSz |
| ADediting_1297602 | chr7_112455212_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297603 | chr7_112455228_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297604 | chr7_112455229_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297605 | chr7_112455234_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297606 | chr7_112455272_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297607 | chr7_112455286_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297608 | chr7_112455292_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297609 | chr7_112455296_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297610 | chr7_112455365_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297611 | chr7_112455374_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297612 | chr7_112455378_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297613 | chr7_112455391_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297614 | chr7_112455405_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297615 | chr7_112455406_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297616 | chr7_112455410_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297617 | chr7_112455424_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297618 | chr7_112455426_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297619 | chr7_112455434_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297620 | chr7_112455435_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297621 | chr7_112455459_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1297622 | chr7_112459082_+ | SINE | Alu | Name=AluJo |
| ADediting_1297623 | chr7_112459084_+ | SINE | Alu | Name=AluJo |
| ADediting_1297624 | chr7_112459165_+ | SINE | Alu | Name=AluJo |
| ADediting_1297625 | chr7_112460303_+ | SINE | Alu | Name=AluJo |
| ADediting_1297626 | chr7_112473518_+ | SINE | Alu | Name=AluSx |
| ADediting_1297627 | chr7_112476404_+ | SINE | Alu | Name=AluJo |
| ADediting_1297628 | chr7_112476407_+ | SINE | Alu | Name=AluJo |
| ADediting_1297629 | chr7_112476413_+ | SINE | Alu | Name=AluJo |
| ADediting_1297630 | chr7_112476476_+ | SINE | Alu | Name=AluJo |
| ADediting_1297631 | chr7_112476560_+ | SINE | Alu | Name=AluJo |
| ADediting_1297632 | chr7_112476561_+ | SINE | Alu | Name=AluJo |
| ADediting_1297633 | chr7_112476579_+ | SINE | Alu | Name=AluJo |
| ADediting_1297634 | chr7_112476588_+ | SINE | Alu | Name=AluJo |
| ADediting_1297635 | chr7_112477259_+ | SINE | Alu | Name=AluSz |
| ADediting_1297636 | chr7_112477340_+ | SINE | Alu | Name=AluSz |
| ADediting_1297637 | chr7_112477371_+ | SINE | Alu | Name=AluSz |
| ADediting_1297638 | chr7_112477379_+ | SINE | Alu | Name=AluSz |
| ADediting_1297639 | chr7_112477434_+ | SINE | Alu | Name=AluSz |
| ADediting_1297640 | chr7_112477473_+ | SINE | Alu | Name=AluSz |
| ADediting_1297641 | chr7_112479225_+ | SINE | Alu | Name=AluSp |
| ADediting_1297642 | chr7_112479297_+ | SINE | Alu | Name=AluSp |
| ADediting_1297643 | chr7_112479303_+ | SINE | Alu | Name=AluSp |
| ADediting_1297644 | chr7_112479337_+ | SINE | Alu | Name=AluSp |
| ADediting_1297645 | chr7_112479340_+ | SINE | Alu | Name=AluSp |
| ADediting_1297646 | chr7_112479366_+ | SINE | Alu | Name=AluSp |
| ADediting_1297647 | chr7_112479391_+ | SINE | Alu | Name=AluSp |
| ADediting_1297648 | chr7_112479395_+ | SINE | Alu | Name=AluSp |
| ADediting_1297649 | chr7_112479419_+ | SINE | Alu | Name=AluSp |
| ADediting_1297650 | chr7_112480115_+ | SINE | Alu | Name=AluSz |
| ADediting_1297651 | chr7_112480122_+ | SINE | Alu | Name=AluSz |
| ADediting_1297652 | chr7_112480123_+ | SINE | Alu | Name=AluSz |
| ADediting_1297653 | chr7_112480168_+ | SINE | Alu | Name=AluSz |
| ADediting_1297654 | chr7_112480176_+ | SINE | Alu | Name=AluSz |
| ADediting_1297655 | chr7_112480177_+ | SINE | Alu | Name=AluSz |
| ADediting_1297656 | chr7_112480188_+ | SINE | Alu | Name=AluSz |
| ADediting_1297657 | chr7_112480192_+ | SINE | Alu | Name=AluSz |
| ADediting_1297658 | chr7_112480202_+ | SINE | Alu | Name=AluSz |
| ADediting_1297659 | chr7_112480231_+ | SINE | Alu | Name=AluSz |
| ADediting_1297660 | chr7_112480235_+ | SINE | Alu | Name=AluSz |
| ADediting_1297661 | chr7_112480239_+ | SINE | Alu | Name=AluSz |
| ADediting_1297662 | chr7_112480251_+ | SINE | Alu | Name=AluSz |
| ADediting_1297663 | chr7_112480257_+ | SINE | Alu | Name=AluSz |
| ADediting_1297664 | chr7_112480258_+ | SINE | Alu | Name=AluSz |
| ADediting_1297665 | chr7_112480263_+ | SINE | Alu | Name=AluSz |
| ADediting_1297666 | chr7_112480267_+ | SINE | Alu | Name=AluSz |
| ADediting_1297667 | chr7_112480314_+ | SINE | Alu | Name=AluSz |
| ADediting_1585570 | chr7_112455364_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1585571 | chr7_112459104_+ | SINE | Alu | Name=AluJo |
| ADediting_1585572 | chr7_112459117_+ | SINE | Alu | Name=AluJo |
| ADediting_1585573 | chr7_112459139_+ | SINE | Alu | Name=AluJo |
| ADediting_1585574 | chr7_112460312_+ | SINE | Alu | Name=AluJo |
| ADediting_1585575 | chr7_112476574_+ | SINE | Alu | Name=AluJo |
| ADediting_1585576 | chr7_112476587_+ | SINE | Alu | Name=AluJo |
| ADediting_1585577 | chr7_112476589_+ | SINE | Alu | Name=AluJo |
| ADediting_1585578 | chr7_112477222_+ | SINE | Alu | Name=AluSz |
| ADediting_1585579 | chr7_112477256_+ | SINE | Alu | Name=AluSz |
| ADediting_1585580 | chr7_112477301_+ | SINE | Alu | Name=AluSz |
| ADediting_1585581 | chr7_112477373_+ | SINE | Alu | Name=AluSz |
| ADediting_1585582 | chr7_112477408_+ | SINE | Alu | Name=AluSz |
| ADediting_1585583 | chr7_112477433_+ | SINE | Alu | Name=AluSz |
| ADediting_1585584 | chr7_112477460_+ | SINE | Alu | Name=AluSz |
| ADediting_1585585 | chr7_112479258_+ | SINE | Alu | Name=AluSp |
| ADediting_1585586 | chr7_112479323_+ | SINE | Alu | Name=AluSp |
| ADediting_1585587 | chr7_112479324_+ | SINE | Alu | Name=AluSp |
| ADediting_1585588 | chr7_112479429_+ | SINE | Alu | Name=AluSp |
| ADediting_1585589 | chr7_112479431_+ | SINE | Alu | Name=AluSp |
| ADediting_1585590 | chr7_112480201_+ | SINE | Alu | Name=AluSz |
| ADediting_1585591 | chr7_112480247_+ | SINE | Alu | Name=AluSz |
| ADediting_1585592 | chr7_112480325_+ | SINE | Alu | Name=AluSz |
| ADediting_1585593 | chr7_112480330_+ | SINE | Alu | Name=AluSz |
| ADediting_1663759 | chr7_112455073_+ | SINE | Alu | Name=AluSz |
| ADediting_1663760 | chr7_112455275_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1663761 | chr7_112455370_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1663762 | chr7_112455430_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1663763 | chr7_112455445_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1663764 | chr7_112460308_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for IFRD1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for IFRD1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for IFRD1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for IFRD1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-10399-5p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 146 | -10.65 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-6504-3p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 155 | -16.19 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-7151-3p | chr7 | 112476399 | 112476406 | 8mer-1a | 112476385 | 112476406 | 146 | -18.07 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-10399-5p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 146 | -10.65 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-6504-3p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 155 | -16.19 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-7151-3p | chr7 | 112476399 | 112476406 | 8mer-1a | 112476385 | 112476406 | 146 | -18.07 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-10399-5p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 146 | -10.65 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-6504-3p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 155 | -16.19 |
| ADediting_1297627 | chr7_112476404_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-7151-3p | chr7 | 112476399 | 112476406 | 8mer-1a | 112476385 | 112476406 | 146 | -18.07 |
| ADediting_1297628 | chr7_112476407_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-625-3p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 140 | -12.37 |
| ADediting_1297628 | chr7_112476407_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-625-3p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 140 | -12.37 |
| ADediting_1297628 | chr7_112476407_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-625-3p | chr7 | 112476401 | 112476407 | 7mer-m8 | 112476387 | 112476408 | 140 | -12.37 |
| ADediting_1297630 | chr7_112476476_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4716-5p | chr7 | 112476470 | 112476476 | 7mer-m8 | 112476456 | 112476477 | 148 | -13.48 |
| ADediting_1297630 | chr7_112476476_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4716-5p | chr7 | 112476470 | 112476476 | 7mer-m8 | 112476456 | 112476477 | 148 | -13.48 |
| ADediting_1297630 | chr7_112476476_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4716-5p | chr7 | 112476470 | 112476476 | 7mer-m8 | 112476456 | 112476477 | 148 | -13.48 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-1976 | chr7 | 112476557 | 112476563 | 7mer-m8 | 112476546 | 112476564 | 148 | -22.84 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4667-3p | chr7 | 112476559 | 112476565 | 7mer-m8 | 112476547 | 112476566 | 153 | -21.23 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-660-3p | chr7 | 112476558 | 112476564 | 7mer-m8 | 112476543 | 112476565 | 146 | -17.88 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-6747-3p | chr7 | 112476555 | 112476562 | 8mer-1a | 112476546 | 112476562 | 146 | -24.38 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-1976 | chr7 | 112476557 | 112476563 | 7mer-m8 | 112476546 | 112476564 | 148 | -22.84 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4667-3p | chr7 | 112476559 | 112476565 | 7mer-m8 | 112476547 | 112476566 | 153 | -21.23 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-660-3p | chr7 | 112476558 | 112476564 | 7mer-m8 | 112476543 | 112476565 | 146 | -17.88 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-6747-3p | chr7 | 112476555 | 112476562 | 8mer-1a | 112476546 | 112476562 | 146 | -24.38 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-1976 | chr7 | 112476557 | 112476563 | 7mer-m8 | 112476546 | 112476564 | 148 | -22.84 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4667-3p | chr7 | 112476559 | 112476565 | 7mer-m8 | 112476547 | 112476566 | 153 | -21.23 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-660-3p | chr7 | 112476558 | 112476564 | 7mer-m8 | 112476543 | 112476565 | 146 | -17.88 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-6747-3p | chr7 | 112476555 | 112476562 | 8mer-1a | 112476546 | 112476562 | 146 | -24.38 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-11181-5p | chr7 | 112476582 | 112476588 | 7mer-m8 | 112476570 | 112476589 | 143 | -16.68 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-301a-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476570 | 112476590 | 153 | -19.56 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-301b-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476569 | 112476590 | 140 | -16.37 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4256 | chr7 | 112476582 | 112476588 | 7mer-m8 | 112476572 | 112476589 | 149 | -16.98 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-11181-5p | chr7 | 112476582 | 112476588 | 7mer-m8 | 112476570 | 112476589 | 143 | -16.68 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-301a-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476570 | 112476590 | 153 | -19.56 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-301b-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476569 | 112476590 | 140 | -16.37 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4256 | chr7 | 112476582 | 112476588 | 7mer-m8 | 112476572 | 112476589 | 149 | -16.98 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-11181-5p | chr7 | 112476582 | 112476588 | 7mer-m8 | 112476570 | 112476589 | 143 | -16.68 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-301a-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476570 | 112476590 | 153 | -19.56 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-301b-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476569 | 112476590 | 140 | -16.37 |
| ADediting_1297634 | chr7_112476588_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4256 | chr7 | 112476582 | 112476588 | 7mer-m8 | 112476572 | 112476589 | 149 | -16.98 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-3136-3p | chr7 | 112476570 | 112476576 | 7mer-m8 | 112476556 | 112476577 | 155 | -16.68 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-6724-5p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476557 | 112476579 | 143 | -25.15 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-6773-5p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476557 | 112476579 | 151 | -23.04 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-7155-3p | chr7 | 112476570 | 112476576 | 7mer-m8 | 112476557 | 112476577 | 148 | -22.57 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-3136-3p | chr7 | 112476570 | 112476576 | 7mer-m8 | 112476556 | 112476577 | 155 | -16.68 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-6724-5p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476557 | 112476579 | 143 | -25.15 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-6773-5p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476557 | 112476579 | 151 | -23.04 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-7155-3p | chr7 | 112476570 | 112476576 | 7mer-m8 | 112476557 | 112476577 | 148 | -22.57 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-3136-3p | chr7 | 112476570 | 112476576 | 7mer-m8 | 112476556 | 112476577 | 155 | -16.68 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-6724-5p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476557 | 112476579 | 143 | -25.15 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-6773-5p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476557 | 112476579 | 151 | -23.04 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-7155-3p | chr7 | 112476570 | 112476576 | 7mer-m8 | 112476557 | 112476577 | 148 | -22.57 |
| ADediting_1585577 | chr7_112476589_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-10397-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476567 | 112476590 | 155 | -22.05 |
| ADediting_1585577 | chr7_112476589_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-10397-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476567 | 112476590 | 155 | -22.05 |
| ADediting_1585577 | chr7_112476589_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-10397-5p | chr7 | 112476583 | 112476589 | 7mer-m8 | 112476567 | 112476590 | 155 | -22.05 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1297628 | chr7_112476407_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-3920 | chr7 | 112476404 | 112476410 | 7mer-m8 | 112476390 | 112476411 | 145 | -10.93 |
| ADediting_1297628 | chr7_112476407_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-3920 | chr7 | 112476404 | 112476410 | 7mer-m8 | 112476390 | 112476411 | 145 | -10.93 |
| ADediting_1297628 | chr7_112476407_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-3920 | chr7 | 112476404 | 112476410 | 7mer-m8 | 112476390 | 112476411 | 145 | -10.93 |
| ADediting_1297629 | chr7_112476413_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-759 | chr7 | 112476411 | 112476417 | 7mer-m8 | 112476397 | 112476418 | 148 | -14.48 |
| ADediting_1297629 | chr7_112476413_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-759 | chr7 | 112476411 | 112476417 | 7mer-m8 | 112476397 | 112476418 | 148 | -14.48 |
| ADediting_1297629 | chr7_112476413_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-759 | chr7 | 112476411 | 112476417 | 7mer-m8 | 112476397 | 112476418 | 148 | -14.48 |
| ADediting_1297631 | chr7_112476560_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-3152-5p | chr7 | 112476554 | 112476560 | 7mer-m8 | 112476539 | 112476561 | 151 | -16.63 |
| ADediting_1297631 | chr7_112476560_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-3152-5p | chr7 | 112476554 | 112476560 | 7mer-m8 | 112476539 | 112476561 | 151 | -16.63 |
| ADediting_1297631 | chr7_112476560_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-3152-5p | chr7 | 112476554 | 112476560 | 7mer-m8 | 112476539 | 112476561 | 151 | -16.63 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-3152-5p | chr7 | 112476554 | 112476560 | 7mer-m8 | 112476539 | 112476561 | 151 | -16.63 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-3152-5p | chr7 | 112476554 | 112476560 | 7mer-m8 | 112476539 | 112476561 | 151 | -16.63 |
| ADediting_1297632 | chr7_112476561_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-3152-5p | chr7 | 112476554 | 112476560 | 7mer-m8 | 112476539 | 112476561 | 151 | -16.63 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-10400-3p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476558 | 112476579 | 140 | -21.91 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-1343-3p | chr7 | 112476575 | 112476581 | 7mer-m8 | 112476559 | 112476582 | 147 | -26.15 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4674 | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476559 | 112476579 | 149 | -25.36 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-660-3p | chr7 | 112476577 | 112476583 | 7mer-m8 | 112476564 | 112476584 | 152 | -18.42 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-6742-3p | chr7 | 112476575 | 112476581 | 7mer-1a | 112476558 | 112476581 | 140 | -25.33 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-6783-3p | chr7 | 112476575 | 112476581 | 7mer-m8 | 112476556 | 112476582 | 153 | -28.54 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-939-3p | chr7 | 112476574 | 112476581 | 8mer-1a | 112476561 | 112476581 | 151 | -20.96 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-10400-3p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476558 | 112476579 | 140 | -21.91 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-1343-3p | chr7 | 112476575 | 112476581 | 7mer-m8 | 112476559 | 112476582 | 147 | -26.15 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4674 | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476559 | 112476579 | 149 | -25.36 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-660-3p | chr7 | 112476577 | 112476583 | 7mer-m8 | 112476564 | 112476584 | 152 | -18.42 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-6742-3p | chr7 | 112476575 | 112476581 | 7mer-1a | 112476558 | 112476581 | 140 | -25.33 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-6783-3p | chr7 | 112476575 | 112476581 | 7mer-m8 | 112476556 | 112476582 | 153 | -28.54 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-939-3p | chr7 | 112476574 | 112476581 | 8mer-1a | 112476561 | 112476581 | 151 | -20.96 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-10400-3p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476558 | 112476579 | 140 | -21.91 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-1343-3p | chr7 | 112476575 | 112476581 | 7mer-m8 | 112476559 | 112476582 | 147 | -26.15 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4674 | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476559 | 112476579 | 149 | -25.36 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-660-3p | chr7 | 112476577 | 112476583 | 7mer-m8 | 112476564 | 112476584 | 152 | -18.42 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-6742-3p | chr7 | 112476575 | 112476581 | 7mer-1a | 112476558 | 112476581 | 140 | -25.33 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-6783-3p | chr7 | 112476575 | 112476581 | 7mer-m8 | 112476556 | 112476582 | 153 | -28.54 |
| ADediting_1297633 | chr7_112476579_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-939-3p | chr7 | 112476574 | 112476581 | 8mer-1a | 112476561 | 112476581 | 151 | -20.96 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-10400-3p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476558 | 112476579 | 140 | -21.91 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4674 | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476559 | 112476579 | 149 | -25.36 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-10400-3p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476558 | 112476579 | 140 | -21.91 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4674 | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476559 | 112476579 | 149 | -25.36 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-10400-3p | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476558 | 112476579 | 140 | -21.91 |
| ADediting_1585575 | chr7_112476574_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4674 | chr7 | 112476572 | 112476578 | 7mer-m8 | 112476559 | 112476579 | 149 | -25.36 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000006652.14 | ENST00000462155.2 | IFRD1-210 | hsa-miR-151a-3p | chr7 | 112480989 | 112480996 | 8mer-1a | 112480976 | 112480996 | 160 | -19.24 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000006652.14 | ENST00000462155.2 | IFRD1-210 | hsa-miR-337-3p | chr7 | 112480894 | 112480900 | 7mer-m8 | 112480880 | 112480901 | 146 | -9.48 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000006652.14 | ENST00000429071.5 | IFRD1-205 | hsa-miR-5682 | chr7 | 112458066 | 112458072 | 7mer-m8 | 112458051 | 112458073 | 146 | -16.51 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4775 | chr7 | 112476872 | 112476878 | 7mer-m8 | 112476857 | 112476879 | 150 | -11.79 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-4775 | chr7 | 112476957 | 112476963 | 7mer-m8 | 112476944 | 112476964 | 143 | -6.61 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4775 | chr7 | 112476872 | 112476878 | 7mer-m8 | 112476857 | 112476879 | 150 | -11.79 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-4775 | chr7 | 112476957 | 112476963 | 7mer-m8 | 112476944 | 112476964 | 143 | -6.61 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4775 | chr7 | 112476872 | 112476878 | 7mer-m8 | 112476857 | 112476879 | 150 | -11.79 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-4775 | chr7 | 112476957 | 112476963 | 7mer-m8 | 112476944 | 112476964 | 143 | -6.61 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000006652.14 | ENST00000403825.8 | IFRD1-202 | hsa-miR-5585-3p | chr7 | 112476039 | 112476045 | 7mer-m8 | 112476024 | 112476046 | 163 | -25.17 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000006652.14 | ENST00000535603.5 | IFRD1-216 | hsa-miR-5585-3p | chr7 | 112476039 | 112476045 | 7mer-m8 | 112476024 | 112476046 | 163 | -25.17 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000006652.14 | ENST00000621379.4 | IFRD1-217 | hsa-miR-5585-3p | chr7 | 112476039 | 112476045 | 7mer-m8 | 112476024 | 112476046 | 163 | -25.17 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000006652.14 | ENST00000429071.5 | IFRD1-205 | hsa-miR-556-3p | chr7 | 112458179 | 112458186 | 8mer-1a | 112458163 | 112458186 | 144 | -6.93 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for IFRD1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000621379.4 | protein_coding |  |  |
| ENST00000403825.8 | protein_coding |  |  |
| ENST00000535603.5 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1297627 | ENST00000621379.4 | chr7_112476404_+ | 2436 | -858.50 | -858.20 | -864.50 |
| ADediting_1297628 | ENST00000621379.4 | chr7_112476407_+ | 2439 | -858.20 | -858.20 | -864.50 |
| ADediting_1297629 | ENST00000621379.4 | chr7_112476413_+ | 2445 | -858.20 | -858.20 | -864.50 |
| ADediting_1297630 | ENST00000621379.4 | chr7_112476476_+ | 2508 | -858.80 | -858.20 | -864.50 |
| ADediting_1297631 | ENST00000621379.4 | chr7_112476560_+ | 2592 | -859.10 | -858.20 | -864.50 |
| ADediting_1297632 | ENST00000621379.4 | chr7_112476561_+ | 2593 | -859.10 | -858.20 | -864.50 |
| ADediting_1585575 | ENST00000621379.4 | chr7_112476574_+ | 2606 | -859.50 | -858.20 | -864.50 |
| ADediting_1297633 | ENST00000621379.4 | chr7_112476579_+ | 2611 | -857.50 | -858.20 | -864.50 |
| ADediting_1585576 | ENST00000621379.4 | chr7_112476587_+ | 2619 | -857.90 | -858.20 | -864.50 |
| ADediting_1297634 | ENST00000621379.4 | chr7_112476588_+ | 2620 | -857.70 | -858.20 | -864.50 |
| ADediting_1585577 | ENST00000621379.4 | chr7_112476589_+ | 2621 | -862.50 | -858.20 | -864.50 |
| ADediting_1297627 | ENST00000403825.8 | chr7_112476404_+ | 2470 | -898.90 | -898.60 | -906.60 |
| ADediting_1297628 | ENST00000403825.8 | chr7_112476407_+ | 2473 | -900.50 | -898.60 | -906.60 |
| ADediting_1297629 | ENST00000403825.8 | chr7_112476413_+ | 2479 | -898.60 | -898.60 | -906.60 |
| ADediting_1297630 | ENST00000403825.8 | chr7_112476476_+ | 2542 | -898.50 | -898.60 | -906.60 |
| ADediting_1297631 | ENST00000403825.8 | chr7_112476560_+ | 2626 | -898.20 | -898.60 | -906.60 |
| ADediting_1297632 | ENST00000403825.8 | chr7_112476561_+ | 2627 | -901.90 | -898.60 | -906.60 |
| ADediting_1585575 | ENST00000403825.8 | chr7_112476574_+ | 2640 | -898.60 | -898.60 | -906.60 |
| ADediting_1297633 | ENST00000403825.8 | chr7_112476579_+ | 2645 | -897.90 | -898.60 | -906.60 |
| ADediting_1585576 | ENST00000403825.8 | chr7_112476587_+ | 2653 | -898.60 | -898.60 | -906.60 |
| ADediting_1297634 | ENST00000403825.8 | chr7_112476588_+ | 2654 | -898.60 | -898.60 | -906.60 |
| ADediting_1585577 | ENST00000403825.8 | chr7_112476589_+ | 2655 | -901.60 | -898.60 | -906.60 |
| ADediting_1297627 | ENST00000535603.5 | chr7_112476404_+ | 2601 | -1003.10 | -1000.80 | -1017.30 |
| ADediting_1297628 | ENST00000535603.5 | chr7_112476407_+ | 2604 | -1002.70 | -1000.80 | -1017.30 |
| ADediting_1297629 | ENST00000535603.5 | chr7_112476413_+ | 2610 | -1000.40 | -1000.80 | -1017.30 |
| ADediting_1297630 | ENST00000535603.5 | chr7_112476476_+ | 2673 | -1000.80 | -1000.80 | -1017.30 |
| ADediting_1297631 | ENST00000535603.5 | chr7_112476560_+ | 2757 | -1002.50 | -1000.80 | -1017.30 |
| ADediting_1297632 | ENST00000535603.5 | chr7_112476561_+ | 2758 | -1005.00 | -1000.80 | -1017.30 |
| ADediting_1585575 | ENST00000535603.5 | chr7_112476574_+ | 2771 | -999.90 | -1000.80 | -1017.30 |
| ADediting_1297633 | ENST00000535603.5 | chr7_112476579_+ | 2776 | -1000.10 | -1000.80 | -1017.30 |
| ADediting_1585576 | ENST00000535603.5 | chr7_112476587_+ | 2784 | -1002.20 | -1000.80 | -1017.30 |
| ADediting_1297634 | ENST00000535603.5 | chr7_112476588_+ | 2785 | -1005.80 | -1000.80 | -1017.30 |
| ADediting_1585577 | ENST00000535603.5 | chr7_112476589_+ | 2786 | -1005.40 | -1000.80 | -1017.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for IFRD1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1297586 | chr7_112454960_+ | 0.209175104189274 | -0.071524301760101 | 0.00131507762406055 | -0.181680403011352 | 6.48468266513962e-12 | 0.377133326811395 |
| DLPFC | ADediting_1297587 | chr7_112454966_+ | 0.357201318505586 | -0.0524688048120639 | 0.00375942008128289 | -0.164122394229815 | 3.18458300392956e-12 | 0.382243064548712 |
| DLPFC | ADediting_1297597 | chr7_112455116_+ | 0.980278291416891 | 0.0014096965677124 | 0.0526601406495597 | -0.110163672297518 | 4.64309450653795e-18 | 0.465293750460588 |
| DLPFC | ADediting_1297615 | chr7_112455406_+ | 0.504898472753787 | 0.0380116899239236 | 0.24713387198626 | -0.065927235366822 | 1.65686836645184e-16 | 0.445331495266018 |
| DLPFC | ADediting_1297617 | chr7_112455424_+ | 0.747804511349539 | -0.0183345288003141 | 0.0177428075287453 | -0.134590927270386 | 1.62166893688974e-14 | 0.417651731319452 |
| DLPFC | ADediting_1297619 | chr7_112455434_+ | 0.548465338832418 | -0.0342094160462966 | 0.00645316119234339 | -0.154397606718826 | 2.03845700102206e-10 | 0.350997317651154 |
| DLPFC | ADediting_1297620 | chr7_112455435_+ | 0.182639616968068 | -0.0758880381263336 | 0.000534407985493025 | -0.195566453899383 | 3.79296970009856e-11 | 0.364040249420522 |
| CER | ADediting_1297623 | chr7_112459084_+ | 2.59659258531249e-05 | 0.33619900099057 | 0.000145991142733919 | 0.305209380805605 | 0.0828182299903163 | 0.142095617209608 |
| CER | ADediting_1297625 | chr7_112460303_+ | 0.000440874332935893 | 0.283407956233004 | 3.70398000267861e-05 | 0.330092903503414 | 0.658587744879884 | 0.0363703444630433 |
| CER | ADediting_1297627 | chr7_112476404_+ | 5.04362501506828e-05 | 0.32467877682277 | 8.82922255040207e-07 | 0.38874606159114 | 0.0283998722745122 | 0.179002526991839 |
| CER | ADediting_1297630 | chr7_112476476_+ | 1.9126708588077e-06 | 0.377521980133871 | 1.8512530088718e-10 | 0.490606218309085 | 0.0196165254627316 | 0.190384368548438 |
| CER | ADediting_1297632 | chr7_112476561_+ | 1.40622191846809e-08 | 0.442709925259821 | 1.18180094730546e-15 | 0.593658886903378 | 0.00177732797182608 | 0.253114023406924 |
| CER | ADediting_1297634 | chr7_112476588_+ | 2.77953160752067e-05 | 0.335038594731565 | 8.91883503733379e-10 | 0.474056470156914 | 0.0228065509076918 | 0.185820939883471 |
| CER | ADediting_1297635 | chr7_112477259_+ | 1.10622388033056e-05 | 0.35036300087237 | 8.14939783739562e-14 | 0.561076508107532 | 0.0047278347085431 | 0.229494513916671 |
| CER | ADediting_1297636 | chr7_112477340_+ | 0.000312015010440769 | 0.290415694083354 | 1.23843117350547e-10 | 0.494699678092849 | 0.00063488558081409 | 0.275812771838742 |
| CER | ADediting_1297637 | chr7_112477371_+ | 0.0976746915807484 | 0.135739718220041 | 7.1287635615078e-05 | 0.318486227908387 | 0.00157868486788977 | 0.255830683462695 |
| CER | ADediting_1297638 | chr7_112477379_+ | 0.000554514320799046 | 0.278656888286143 | 3.44400385503734e-07 | 0.401877775995122 | 0.167448703777989 | 0.113297635736339 |
| CER | ADediting_1297639 | chr7_112477434_+ | 0.00619409395849823 | 0.222553306235081 | 1.44883004328334e-05 | 0.345957943001554 | 0.0485450372268849 | 0.161352180842974 |
| CER | ADediting_1297640 | chr7_112477473_+ | 4.07047613017552e-06 | 0.366136319036124 | 1.59281936851949e-11 | 0.514778351578408 | 6.11730204107174e-06 | 0.359810365526837 |
| CER | ADediting_1297642 | chr7_112479297_+ | 6.72874549042494e-08 | 0.423397882720615 | 5.23569643839384e-15 | 0.582610666816917 | 0.0560245012121326 | 0.156366800696763 |
| CER | ADediting_1297643 | chr7_112479303_+ | 5.10840078578136e-06 | 0.362625843378683 | 1.39965731344829e-10 | 0.493459267493946 | 0.0102135607104787 | 0.209143281318804 |
| CER | ADediting_1297644 | chr7_112479337_+ | 1.25727313149671e-05 | 0.348281512482634 | 4.83968852004175e-12 | 0.525866081735797 | 0.0722002056685569 | 0.147224757692872 |
| CER | ADediting_1297645 | chr7_112479340_+ | 0.000168941474382697 | 0.302426226627338 | 6.4628444760556e-07 | 0.3931610276636 | 0.815866789835723 | 0.0191719239344634 |
| CER | ADediting_1297646 | chr7_112479366_+ | 1.33124972740681e-07 | 0.414587697251845 | 3.18412096671335e-15 | 0.586348924789774 | 0.347406536328063 | 0.0772521257836599 |
| CER | ADediting_1297647 | chr7_112479391_+ | 0.00730631572511504 | 0.218208814301036 | 1.16199640427111e-05 | 0.349564833947617 | 0.0218741863852262 | 0.187094636054448 |
| CER | ADediting_1297648 | chr7_112479395_+ | 2.63167635832743e-05 | 0.335970618836272 | 2.65779851636143e-08 | 0.435001581534537 | 0.00224911910447966 | 0.24763029233475 |
| CER | ADediting_1297651 | chr7_112480122_+ | 1.74478096180803e-07 | 0.41102379671769 | 1.86162042740734e-10 | 0.490548971570672 | 0.250253163029128 | 0.0944555602606208 |
| CER | ADediting_1297652 | chr7_112480123_+ | 4.3213465607062e-06 | 0.365215939695671 | 8.6159862157592e-09 | 0.448513925861494 | 0.0101992979930374 | 0.209181839389255 |
| CER | ADediting_1297654 | chr7_112480176_+ | 0.00623720654612992 | 0.222372414555468 | 5.86013505472035e-05 | 0.322009895274233 | 0.088566316101604 | 0.139536314829277 |
| CER | ADediting_1297659 | chr7_112480231_+ | 0.000631782420096221 | 0.275916258947749 | 6.87895029474808e-08 | 0.423116721503061 | 0.0580101209366269 | 0.155136218728921 |
| CER | ADediting_1297660 | chr7_112480235_+ | 0.000653691593429861 | 0.275195397507132 | 4.61920778044986e-07 | 0.39784297198088 | 0.0180986653437032 | 0.192785335077715 |
| CER | ADediting_1297661 | chr7_112480239_+ | 0.0188856622546361 | 0.191519585481484 | 0.000167736784623238 | 0.302563291006141 | 0.0635711352144288 | 0.15186508303012 |
| CER | ADediting_1297662 | chr7_112480251_+ | 1.81791514287507e-05 | 0.342200853377123 | 2.46310382528878e-09 | 0.46287491302203 | 0.00086183137411755 | 0.269276832601297 |
| CER | ADediting_1297663 | chr7_112480257_+ | 3.5799159038598e-05 | 0.330684181036272 | 1.01239352273879e-07 | 0.418153384502014 | 0.00129205532495418 | 0.260358991613727 |
| CER | ADediting_1297664 | chr7_112480258_+ | 0.000140472272052504 | 0.305939332392715 | 1.58979628550379e-06 | 0.38024479155724 | 8.08639906116652e-05 | 0.316196469476277 |
| CER | ADediting_1297665 | chr7_112480263_+ | 0.000175792264726723 | 0.301663656236517 | 1.29765063733821e-06 | 0.383206937620518 | 0.00331883975969408 | 0.238297911228155 |
| CER | ADediting_1297666 | chr7_112480267_+ | 2.3493475757859e-05 | 0.337896096928799 | 2.52828177582768e-08 | 0.435613496325123 | 0.00625465479884125 | 0.222299521788829 |
| CER | ADediting_1297667 | chr7_112480314_+ | 2.12624758566412e-06 | 0.375951934915008 | 4.06774688095178e-12 | 0.527450366588573 | 0.0382326628269276 | 0.169399007091693 |
| CER | ADediting_1585575 | chr7_112476574_+ | 0.00235771047651108 | 0.246517592543078 | 4.6405899871069e-05 | 0.326149454459237 | 0.409547028390212 | 0.0678255455848852 |
| CER | ADediting_1585577 | chr7_112476589_+ | 1.02398008274655e-05 | 0.351612276580795 | 4.11879374646061e-14 | 0.56657765704544 | 0.000115324547557731 | 0.309646299400055 |
| CER | ADediting_1585582 | chr7_112477408_+ | 0.00623568237251412 | 0.222378790652152 | 6.1469271087879e-07 | 0.393864282513703 | 0.0280053957138792 | 0.17944383549517 |
| CER | ADediting_1585589 | chr7_112479431_+ | 0.00153395824300283 | 0.256485159812495 | 1.12232906041006e-05 | 0.350128683096008 | 0.0176132351983809 | 0.193590060904825 |
| CER | ADediting_1585593 | chr7_112480330_+ | 0.00302890185704817 | 0.240522096220253 | 1.81259691723929e-05 | 0.342249666833487 | 0.324287537525757 | 0.0810262745887182 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.12686856534839e-15 | 0.434060790818509 | 6.92547468756504e-15 | 0.422984894116251 | 0.233078219770306 | 0.067923720692155 |
| AC | 1.43555395762258e-27 | 0.616544786168971 | 1.02512300183946e-15 | 0.478578720218695 | 4.50822040141772e-15 | 0.468932425517689 |
| PCC | 7.35729750449025e-08 | 0.377421355622848 | 2.57422916758934e-10 | 0.437122753299088 | 0.0343071904321304 | 0.153240650758304 |
| CER | 5.64002135326716e-11 | 0.502555162744846 | 6.4424691431155e-15 | 0.581037370601181 | 0.000175222520821561 | 0.301726010817365 |
| TCX | 1.18978551506744e-07 | 0.416055758694573 | 0.228686989551524 | 0.098871699596308 | 3.38077326585999e-12 | 0.529128003529214 |
| FP | 8.05993408363029e-08 | 0.388971060715385 | 4.47348680116129e-12 | 0.488738486984505 | 0.0913023079052529 | 0.126945308412962 |
| IFG | 2.58215424800108e-05 | 0.73762892764107 | 2.84271275614716e-05 | 0.735111145374588 | 0.00210543025930474 | 0.585512931043345 |
| PG | 7.68399605567453e-31 | 0.718588312710961 | 1.36954930244373e-20 | 0.613162617473032 | 0.835503710748031 | 0.015327936359292 |
| STG | 8.67747826367227e-07 | 0.506833175299564 | 2.50736668291299e-07 | 0.527628655003664 | 0.596231615773767 | 0.05863774705741 |
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Relation with AD stages for IFRD1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1297632 | chr7_112476561_+ | 0.000103585729561986 | 0.364833704008051 |
| CER | ADediting_1297635 | chr7_112477259_+ | 0.00110345309721806 | 0.309799490374426 |
| CER | ADediting_1297636 | chr7_112477340_+ | 4.06472542879538e-07 | 0.464658641414616 |
| CER | ADediting_1297640 | chr7_112477473_+ | 8.44185698483391e-05 | 0.369151791425225 |
| CER | ADediting_1297644 | chr7_112479337_+ | 0.000866647962215916 | 0.315912667645518 |
| CER | ADediting_1585577 | chr7_112476589_+ | 0.000230667913347662 | 0.347322465287919 |
| TCX | ADediting_1297625 | chr7_112460303_+ | 0.000285804777946606 | 0.345545141196611 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 1.1523151078674e-05 | 0.408288485476 |
| TCX | 4.0251114523355e-08 | 0.502585500872694 |
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RelatedDrugs for IFRD1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for IFRD1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| IFRD1 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
| IFRD1 | C0035222 | Respiratory Distress Syndrome, Adult | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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