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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for DSE |
 Gene summary |
| Gene information | Gene symbol | DSE | Gene ID | 29940 |
| Gene name | dermatan sulfate epimerase | |
| Synonyms | DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 | |
| Cytomap | 6q22.1 | |
| Type of gene | protein-coding | |
| Description | dermatan-sulfate epimeraseDS epimerasechondroitin-glucuronate 5-epimerasesquamous cell carcinoma antigen recognized by T-cells 2 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9UL01, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| DSE | GO:0030208 | dermatan sulfate biosynthetic process | 16505484 |
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RNA A-to-I events for DSE |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1226768(116293633, +), ADediting_1226769(116293640, +), ADediting_1226770(116293647, +), ADediting_1226771(116293677, +), ADediting_1226772(116293700, +), ADediting_1226773(116293701, +), ADediting_1226774(116293711, +), ADediting_1226775(116293796, +), ADediting_1226776(116293801, +), ADediting_1226777(116293814, +), ADediting_1226778(116293815, +), ADediting_1226779(116293822, +), ADediting_1226780(116293830, +), ADediting_1226781(116293833, +), ADediting_1226782(116293836, +), ADediting_1226783(116293863, +), ADediting_1226784(116293866, +), ADediting_1226785(116294299, +), ADediting_1226786(116303903, +), ADediting_1226787(116303911, +), ADediting_1226788(116303958, +), ADediting_1226789(116304005, +), ADediting_1226790(116304015, +), ADediting_1226791(116304021, +), ADediting_1226792(116304025, +), ADediting_1226793(116304029, +), ADediting_1226794(116304032, +), ADediting_1226795(116304068, +), ADediting_1226796(116304069, +), ADediting_1226797(116304073, +), ADediting_1226798(116304080, +), ADediting_1226799(116304088, +), ADediting_1226800(116304110, +), ADediting_1226801(116305702, +), ADediting_1226802(116305894, +), ADediting_1226803(116305904, +), ADediting_1226804(116311868, +), ADediting_1226805(116311885, +), ADediting_1226806(116311892, +), ADediting_1226807(116313065, +), ADediting_1226808(116329893, +), ADediting_1226809(116330005, +), ADediting_1226810(116330008, +), ADediting_1226811(116330027, +), ADediting_1226812(116330068, +), ADediting_1226813(116331830, +), ADediting_1226814(116331836, +), ADediting_1226815(116331906, +), ADediting_1226816(116331907, +), ADediting_1226817(116347322, +), ADediting_1226818(116347330, +), ADediting_1226819(116409356, +), ADediting_1226820(116409357, +), ADediting_1226821(116409381, +), ADediting_1226822(116409417, +), ADediting_1226823(116409461, +), ADediting_1226824(116409481, +), ADediting_1226825(116410505, +), ADediting_1226826(116410517, +), ADediting_1226827(116410556, +), ADediting_1226828(116410570, +), ADediting_1226829(116410613, +), ADediting_1226830(116410646, +), ADediting_1226831(116410684, +), ADediting_1226832(116428003, +), ADediting_1226833(116428027, +), ADediting_1226834(116428069, +), ADediting_1226835(116428082, +), ADediting_1226836(116430622, +), ADediting_1226837(116430628, +), ADediting_1226838(116430643, +), ADediting_1226839(116430667, +), ADediting_1226840(116430671, +), ADediting_1226841(116430681, +), ADediting_1226842(116430699, +), ADediting_1226843(116430732, +), ADediting_1226844(116430748, +), ADediting_1226845(116439867, +), ADediting_1226846(116439883, +), ADediting_1226847(116439891, +), ADediting_1226848(116440347, +), ADediting_1226849(116440398, +), ADediting_1659114(116294085, +), ADediting_1659115(116294284, +), ADediting_1659116(116294302, +), ADediting_1659117(116311852, +), ADediting_1659118(116311878, +), ADediting_1659119(116311891, +), ADediting_1659120(116313343, +), ADediting_1659121(116329963, +), ADediting_1659122(116329973, +), |
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RNA editing positional annotations for DSE using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1226768 | chr6_116293633_+ | intronic |
| ADediting_1226769 | chr6_116293640_+ | intronic |
| ADediting_1226770 | chr6_116293647_+ | intronic |
| ADediting_1226771 | chr6_116293677_+ | intronic |
| ADediting_1226772 | chr6_116293700_+ | intronic |
| ADediting_1226773 | chr6_116293701_+ | intronic |
| ADediting_1226774 | chr6_116293711_+ | intronic |
| ADediting_1226775 | chr6_116293796_+ | intronic |
| ADediting_1226776 | chr6_116293801_+ | intronic |
| ADediting_1226777 | chr6_116293814_+ | intronic |
| ADediting_1226778 | chr6_116293815_+ | intronic |
| ADediting_1226779 | chr6_116293822_+ | intronic |
| ADediting_1226780 | chr6_116293830_+ | intronic |
| ADediting_1226781 | chr6_116293833_+ | intronic |
| ADediting_1226782 | chr6_116293836_+ | intronic |
| ADediting_1226783 | chr6_116293863_+ | intronic |
| ADediting_1226784 | chr6_116293866_+ | intronic |
| ADediting_1226785 | chr6_116294299_+ | intronic |
| ADediting_1226786 | chr6_116303903_+ | intronic |
| ADediting_1226787 | chr6_116303911_+ | intronic |
| ADediting_1226788 | chr6_116303958_+ | intronic |
| ADediting_1226789 | chr6_116304005_+ | intronic |
| ADediting_1226790 | chr6_116304015_+ | intronic |
| ADediting_1226791 | chr6_116304021_+ | intronic |
| ADediting_1226792 | chr6_116304025_+ | intronic |
| ADediting_1226793 | chr6_116304029_+ | intronic |
| ADediting_1226794 | chr6_116304032_+ | intronic |
| ADediting_1226795 | chr6_116304068_+ | intronic |
| ADediting_1226796 | chr6_116304069_+ | intronic |
| ADediting_1226797 | chr6_116304073_+ | intronic |
| ADediting_1226798 | chr6_116304080_+ | intronic |
| ADediting_1226799 | chr6_116304088_+ | intronic |
| ADediting_1226800 | chr6_116304110_+ | intronic |
| ADediting_1226801 | chr6_116305702_+ | intronic |
| ADediting_1226802 | chr6_116305894_+ | intronic |
| ADediting_1226803 | chr6_116305904_+ | intronic |
| ADediting_1226804 | chr6_116311868_+ | intronic |
| ADediting_1226805 | chr6_116311885_+ | intronic |
| ADediting_1226806 | chr6_116311892_+ | intronic |
| ADediting_1226807 | chr6_116313065_+ | intronic |
| ADediting_1226808 | chr6_116329893_+ | intronic |
| ADediting_1226809 | chr6_116330005_+ | intronic |
| ADediting_1226810 | chr6_116330008_+ | intronic |
| ADediting_1226811 | chr6_116330027_+ | intronic |
| ADediting_1226812 | chr6_116330068_+ | intronic |
| ADediting_1226813 | chr6_116331830_+ | intronic |
| ADediting_1226814 | chr6_116331836_+ | intronic |
| ADediting_1226815 | chr6_116331906_+ | intronic |
| ADediting_1226816 | chr6_116331907_+ | intronic |
| ADediting_1226817 | chr6_116347322_+ | intronic |
| ADediting_1226818 | chr6_116347330_+ | intronic |
| ADediting_1226819 | chr6_116409356_+ | intronic |
| ADediting_1226820 | chr6_116409357_+ | intronic |
| ADediting_1226821 | chr6_116409381_+ | intronic |
| ADediting_1226822 | chr6_116409417_+ | intronic |
| ADediting_1226823 | chr6_116409461_+ | intronic |
| ADediting_1226824 | chr6_116409481_+ | intronic |
| ADediting_1226825 | chr6_116410505_+ | intronic |
| ADediting_1226826 | chr6_116410517_+ | intronic |
| ADediting_1226827 | chr6_116410556_+ | intronic |
| ADediting_1226828 | chr6_116410570_+ | intronic |
| ADediting_1226829 | chr6_116410613_+ | intronic |
| ADediting_1226830 | chr6_116410646_+ | intronic |
| ADediting_1226831 | chr6_116410684_+ | intronic |
| ADediting_1226832 | chr6_116428003_+ | intronic |
| ADediting_1226833 | chr6_116428027_+ | intronic |
| ADediting_1226834 | chr6_116428069_+ | intronic |
| ADediting_1226835 | chr6_116428082_+ | intronic |
| ADediting_1226836 | chr6_116430622_+ | intronic |
| ADediting_1226837 | chr6_116430628_+ | intronic |
| ADediting_1226838 | chr6_116430643_+ | intronic |
| ADediting_1226839 | chr6_116430667_+ | intronic |
| ADediting_1226840 | chr6_116430671_+ | intronic |
| ADediting_1226841 | chr6_116430681_+ | intronic |
| ADediting_1226842 | chr6_116430699_+ | intronic |
| ADediting_1226843 | chr6_116430732_+ | intronic |
| ADediting_1226844 | chr6_116430748_+ | intronic |
| ADediting_1226845 | chr6_116439867_+ | UTR3 |
| ADediting_1226846 | chr6_116439883_+ | UTR3 |
| ADediting_1226847 | chr6_116439891_+ | UTR3 |
| ADediting_1226848 | chr6_116440347_+ | UTR3 |
| ADediting_1226849 | chr6_116440398_+ | UTR3 |
| ADediting_1659114 | chr6_116294085_+ | intronic |
| ADediting_1659115 | chr6_116294284_+ | intronic |
| ADediting_1659116 | chr6_116294302_+ | intronic |
| ADediting_1659117 | chr6_116311852_+ | intronic |
| ADediting_1659118 | chr6_116311878_+ | intronic |
| ADediting_1659119 | chr6_116311891_+ | intronic |
| ADediting_1659120 | chr6_116313343_+ | intronic |
| ADediting_1659121 | chr6_116329963_+ | intronic |
| ADediting_1659122 | chr6_116329973_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1226768 | chr6_116293633_+ | SINE | Alu | Name=AluJo |
| ADediting_1226769 | chr6_116293640_+ | SINE | Alu | Name=AluJo |
| ADediting_1226770 | chr6_116293647_+ | SINE | Alu | Name=AluJo |
| ADediting_1226771 | chr6_116293677_+ | SINE | Alu | Name=AluJo |
| ADediting_1226772 | chr6_116293700_+ | SINE | Alu | Name=AluJo |
| ADediting_1226773 | chr6_116293701_+ | SINE | Alu | Name=AluJo |
| ADediting_1226774 | chr6_116293711_+ | SINE | Alu | Name=AluJo |
| ADediting_1226775 | chr6_116293796_+ | SINE | Alu | Name=AluJo |
| ADediting_1226776 | chr6_116293801_+ | SINE | Alu | Name=AluJo |
| ADediting_1226777 | chr6_116293814_+ | SINE | Alu | Name=AluJo |
| ADediting_1226778 | chr6_116293815_+ | SINE | Alu | Name=AluJo |
| ADediting_1226779 | chr6_116293822_+ | SINE | Alu | Name=AluJo |
| ADediting_1226780 | chr6_116293830_+ | SINE | Alu | Name=AluJo |
| ADediting_1226781 | chr6_116293833_+ | SINE | Alu | Name=AluJo |
| ADediting_1226782 | chr6_116293836_+ | SINE | Alu | Name=AluJo |
| ADediting_1226783 | chr6_116293863_+ | SINE | Alu | Name=AluJo |
| ADediting_1226784 | chr6_116293866_+ | SINE | Alu | Name=AluJo |
| ADediting_1226785 | chr6_116294299_+ | SINE | Alu | Name=AluJo |
| ADediting_1226786 | chr6_116303903_+ | SINE | Alu | Name=AluY |
| ADediting_1226787 | chr6_116303911_+ | SINE | Alu | Name=AluY |
| ADediting_1226788 | chr6_116303958_+ | SINE | Alu | Name=AluY |
| ADediting_1226789 | chr6_116304005_+ | SINE | Alu | Name=AluY |
| ADediting_1226790 | chr6_116304015_+ | SINE | Alu | Name=AluY |
| ADediting_1226791 | chr6_116304021_+ | SINE | Alu | Name=AluY |
| ADediting_1226792 | chr6_116304025_+ | SINE | Alu | Name=AluY |
| ADediting_1226793 | chr6_116304029_+ | SINE | Alu | Name=AluY |
| ADediting_1226794 | chr6_116304032_+ | SINE | Alu | Name=AluY |
| ADediting_1226795 | chr6_116304068_+ | SINE | Alu | Name=AluY |
| ADediting_1226796 | chr6_116304069_+ | SINE | Alu | Name=AluY |
| ADediting_1226797 | chr6_116304073_+ | SINE | Alu | Name=AluY |
| ADediting_1226798 | chr6_116304080_+ | SINE | Alu | Name=AluY |
| ADediting_1226799 | chr6_116304088_+ | SINE | Alu | Name=AluY |
| ADediting_1226800 | chr6_116304110_+ | SINE | Alu | Name=AluY |
| ADediting_1226801 | chr6_116305702_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1226802 | chr6_116305894_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1226803 | chr6_116305904_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1226804 | chr6_116311868_+ | LINE | L2 | Name=L2a |
| ADediting_1226805 | chr6_116311885_+ | LINE | L2 | Name=L2a |
| ADediting_1226806 | chr6_116311892_+ | LINE | L2 | Name=L2a |
| ADediting_1226807 | chr6_116313065_+ | LTR | ERVL-MaLR | Name=MLT1C |
| ADediting_1226808 | chr6_116329893_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1226809 | chr6_116330005_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1226810 | chr6_116330008_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1226811 | chr6_116330027_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1226812 | chr6_116330068_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1226813 | chr6_116331830_+ | SINE | Alu | Name=AluSc |
| ADediting_1226814 | chr6_116331836_+ | SINE | Alu | Name=AluSc |
| ADediting_1226815 | chr6_116331906_+ | SINE | Alu | Name=AluSc |
| ADediting_1226816 | chr6_116331907_+ | SINE | Alu | Name=AluSc |
| ADediting_1226817 | chr6_116347322_+ | LINE | L1 | Name=L1PA5 |
| ADediting_1226818 | chr6_116347330_+ | LINE | L1 | Name=L1PA5 |
| ADediting_1226819 | chr6_116409356_+ | SINE | Alu | Name=AluY |
| ADediting_1226820 | chr6_116409357_+ | SINE | Alu | Name=AluY |
| ADediting_1226821 | chr6_116409381_+ | SINE | Alu | Name=AluY |
| ADediting_1226822 | chr6_116409417_+ | SINE | Alu | Name=AluY |
| ADediting_1226823 | chr6_116409461_+ | SINE | Alu | Name=AluY |
| ADediting_1226824 | chr6_116409481_+ | SINE | Alu | Name=AluY |
| ADediting_1226825 | chr6_116410505_+ | SINE | Alu | Name=AluY |
| ADediting_1226826 | chr6_116410517_+ | SINE | Alu | Name=AluY |
| ADediting_1226827 | chr6_116410556_+ | SINE | Alu | Name=AluY |
| ADediting_1226828 | chr6_116410570_+ | SINE | Alu | Name=AluY |
| ADediting_1226829 | chr6_116410613_+ | SINE | Alu | Name=AluY |
| ADediting_1226830 | chr6_116410646_+ | SINE | Alu | Name=AluY |
| ADediting_1226831 | chr6_116410684_+ | SINE | Alu | Name=AluY |
| ADediting_1226832 | chr6_116428003_+ | SINE | Alu | Name=AluSz |
| ADediting_1226833 | chr6_116428027_+ | SINE | Alu | Name=AluSz |
| ADediting_1226834 | chr6_116428069_+ | SINE | Alu | Name=AluSz |
| ADediting_1226835 | chr6_116428082_+ | SINE | Alu | Name=AluSz |
| ADediting_1226836 | chr6_116430622_+ | SINE | Alu | Name=AluY |
| ADediting_1226837 | chr6_116430628_+ | SINE | Alu | Name=AluY |
| ADediting_1226838 | chr6_116430643_+ | SINE | Alu | Name=AluY |
| ADediting_1226839 | chr6_116430667_+ | SINE | Alu | Name=AluY |
| ADediting_1226840 | chr6_116430671_+ | SINE | Alu | Name=AluY |
| ADediting_1226841 | chr6_116430681_+ | SINE | Alu | Name=AluY |
| ADediting_1226842 | chr6_116430699_+ | SINE | Alu | Name=AluY |
| ADediting_1226843 | chr6_116430732_+ | SINE | Alu | Name=AluY |
| ADediting_1226844 | chr6_116430748_+ | SINE | Alu | Name=AluY |
| ADediting_1226845 | chr6_116439867_+ | SINE | Alu | Name=AluJr |
| ADediting_1226846 | chr6_116439883_+ | SINE | Alu | Name=AluJr |
| ADediting_1226847 | chr6_116439891_+ | SINE | Alu | Name=AluJr |
| ADediting_1226848 | chr6_116440347_+ | SINE | Alu | Name=AluJo |
| ADediting_1226849 | chr6_116440398_+ | SINE | Alu | Name=AluJo |
| ADediting_1659114 | chr6_116294085_+ | SINE | Alu | Name=AluJo |
| ADediting_1659115 | chr6_116294284_+ | SINE | Alu | Name=AluJo |
| ADediting_1659116 | chr6_116294302_+ | SINE | Alu | Name=AluJo |
| ADediting_1659117 | chr6_116311852_+ | LINE | L2 | Name=L2a |
| ADediting_1659118 | chr6_116311878_+ | LINE | L2 | Name=L2a |
| ADediting_1659119 | chr6_116311891_+ | LINE | L2 | Name=L2a |
| ADediting_1659120 | chr6_116313343_+ | LTR | ERVL-MaLR | Name=MLT1C |
| ADediting_1659121 | chr6_116329963_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1659122 | chr6_116329973_+ | SINE | Alu | Name=AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for DSE |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DSE |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for DSE |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for DSE |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1226845 | chr6_116439867_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-150-5p | chr6 | 116439864 | 116439870 | 7mer-m8 | 116439849 | 116439871 | 143 | -15.38 |
| ADediting_1226845 | chr6_116439867_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-150-5p | chr6 | 116439864 | 116439870 | 7mer-m8 | 116439849 | 116439871 | 143 | -15.38 |
| ADediting_1226845 | chr6_116439867_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-150-5p | chr6 | 116439864 | 116439870 | 7mer-m8 | 116439849 | 116439871 | 143 | -15.38 |
| ADediting_1226847 | chr6_116439891_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-12122 | chr6 | 116439888 | 116439894 | 7mer-m8 | 116439869 | 116439895 | 157 | -18.27 |
| ADediting_1226847 | chr6_116439891_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-12122 | chr6 | 116439888 | 116439894 | 7mer-m8 | 116439869 | 116439895 | 157 | -18.27 |
| ADediting_1226847 | chr6_116439891_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-12122 | chr6 | 116439888 | 116439894 | 7mer-m8 | 116439869 | 116439895 | 157 | -18.27 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-508-5p | chr6 | 116440343 | 116440349 | 7mer-m8 | 116440328 | 116440350 | 149 | -19.96 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-6512-3p | chr6 | 116440341 | 116440347 | 7mer-m8 | 116440327 | 116440348 | 145 | -18.84 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-6720-5p | chr6 | 116440341 | 116440347 | 7mer-m8 | 116440327 | 116440348 | 155 | -23.71 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-6849-3p | chr6 | 116440340 | 116440347 | 8mer-1a | 116440326 | 116440347 | 152 | -18.75 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-766-3p | chr6 | 116440342 | 116440348 | 7mer-m8 | 116440328 | 116440349 | 145 | -20.34 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-508-5p | chr6 | 116440343 | 116440349 | 7mer-m8 | 116440328 | 116440350 | 149 | -19.96 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-6512-3p | chr6 | 116440341 | 116440347 | 7mer-m8 | 116440327 | 116440348 | 145 | -18.84 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-6720-5p | chr6 | 116440341 | 116440347 | 7mer-m8 | 116440327 | 116440348 | 155 | -23.71 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-6849-3p | chr6 | 116440340 | 116440347 | 8mer-1a | 116440326 | 116440347 | 152 | -18.75 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-766-3p | chr6 | 116440342 | 116440348 | 7mer-m8 | 116440328 | 116440349 | 145 | -20.34 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-508-5p | chr6 | 116440343 | 116440349 | 7mer-m8 | 116440328 | 116440350 | 149 | -19.96 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-6512-3p | chr6 | 116440341 | 116440347 | 7mer-m8 | 116440327 | 116440348 | 145 | -18.84 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-6720-5p | chr6 | 116440341 | 116440347 | 7mer-m8 | 116440327 | 116440348 | 155 | -23.71 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-6849-3p | chr6 | 116440340 | 116440347 | 8mer-1a | 116440326 | 116440347 | 152 | -18.75 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-766-3p | chr6 | 116440342 | 116440348 | 7mer-m8 | 116440328 | 116440349 | 145 | -20.34 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-1184 | chr6 | 116439877 | 116439883 | 7mer-m8 | 116439863 | 116439884 | 146 | -18.45 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4418 | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439868 | 116439885 | 152 | -20.79 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-509-3-5p | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439865 | 116439885 | 153 | -18.35 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-509-5p | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439864 | 116439885 | 151 | -19.74 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-1184 | chr6 | 116439877 | 116439883 | 7mer-m8 | 116439863 | 116439884 | 146 | -18.45 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4418 | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439868 | 116439885 | 152 | -20.79 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-509-3-5p | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439865 | 116439885 | 153 | -18.35 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-509-5p | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439864 | 116439885 | 151 | -19.74 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-1184 | chr6 | 116439877 | 116439883 | 7mer-m8 | 116439863 | 116439884 | 146 | -18.45 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4418 | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439868 | 116439885 | 152 | -20.79 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-509-3-5p | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439865 | 116439885 | 153 | -18.35 |
| ADediting_1226846 | chr6_116439883_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-509-5p | chr6 | 116439878 | 116439884 | 7mer-m8 | 116439864 | 116439885 | 151 | -19.74 |
| ADediting_1226847 | chr6_116439891_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-7705 | chr6 | 116439885 | 116439891 | 7mer-m8 | 116439873 | 116439892 | 148 | -15.02 |
| ADediting_1226847 | chr6_116439891_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-7705 | chr6 | 116439885 | 116439891 | 7mer-m8 | 116439873 | 116439892 | 148 | -15.02 |
| ADediting_1226847 | chr6_116439891_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-7705 | chr6 | 116439885 | 116439891 | 7mer-m8 | 116439873 | 116439892 | 148 | -15.02 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-3157-5p | chr6 | 116440341 | 116440347 | 7mer-1a | 116440326 | 116440347 | 143 | -22.37 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-3157-5p | chr6 | 116440341 | 116440347 | 7mer-1a | 116440326 | 116440347 | 143 | -22.37 |
| ADediting_1226848 | chr6_116440347_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-3157-5p | chr6 | 116440341 | 116440347 | 7mer-1a | 116440326 | 116440347 | 143 | -22.37 |
| ADediting_1226849 | chr6_116440398_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4720-3p | chr6 | 116440393 | 116440399 | 7mer-m8 | 116440382 | 116440400 | 148 | -13.18 |
| ADediting_1226849 | chr6_116440398_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4720-3p | chr6 | 116440393 | 116440399 | 7mer-m8 | 116440382 | 116440400 | 148 | -13.18 |
| ADediting_1226849 | chr6_116440398_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4720-3p | chr6 | 116440393 | 116440399 | 7mer-m8 | 116440382 | 116440400 | 148 | -13.18 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-5581-3p | chr6 | 116437114 | 116437120 | 7mer-m8 | 116437099 | 116437121 | 155 | -21.97 |
| ADediting_107020 | chr1_37500952_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-5581-3p | chr6 | 116437114 | 116437120 | 7mer-m8 | 116437099 | 116437121 | 155 | -21.97 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-5688 | chr6 | 116439028 | 116439034 | 7mer-m8 | 116439014 | 116439035 | 140 | -9.81 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-5688 | chr6 | 116439028 | 116439034 | 7mer-m8 | 116439014 | 116439035 | 140 | -9.81 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-5688 | chr6 | 116439028 | 116439034 | 7mer-m8 | 116439014 | 116439035 | 140 | -9.81 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-151a-3p | chr6 | 116437591 | 116437597 | 7mer-m8 | 116437578 | 116437598 | 140 | -14.12 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-151a-3p | chr6 | 116437591 | 116437597 | 7mer-m8 | 116437578 | 116437598 | 140 | -14.12 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-151a-3p | chr6 | 116437591 | 116437597 | 7mer-m8 | 116437578 | 116437598 | 140 | -14.12 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-151a-3p | chr6 | 116437591 | 116437597 | 7mer-m8 | 116437578 | 116437598 | 140 | -14.12 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-151a-3p | chr6 | 116437591 | 116437597 | 7mer-m8 | 116437578 | 116437598 | 140 | -14.12 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4477b | chr6 | 116443267 | 116443273 | 7mer-m8 | 116443251 | 116443274 | 155 | -16.54 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4477b | chr6 | 116443267 | 116443273 | 7mer-m8 | 116443251 | 116443274 | 155 | -16.54 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-381-3p | chr6 | 116438032 | 116438038 | 7mer-m8 | 116438016 | 116438039 | 150 | -18.22 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-381-3p | chr6 | 116438854 | 116438861 | 8mer-1a | 116438840 | 116438861 | 142 | -13.61 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-381-3p | chr6 | 116438032 | 116438038 | 7mer-m8 | 116438016 | 116438039 | 150 | -18.22 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-381-3p | chr6 | 116438032 | 116438038 | 7mer-m8 | 116438016 | 116438039 | 150 | -18.22 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-381-3p | chr6 | 116438854 | 116438861 | 8mer-1a | 116438840 | 116438861 | 142 | -13.61 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-381-3p | chr6 | 116441275 | 116441282 | 8mer-1a | 116441260 | 116441282 | 152 | -13.94 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-381-3p | chr6 | 116438032 | 116438038 | 7mer-m8 | 116438016 | 116438039 | 150 | -18.22 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-381-3p | chr6 | 116438854 | 116438861 | 8mer-1a | 116438840 | 116438861 | 142 | -13.61 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-381-3p | chr6 | 116441275 | 116441282 | 8mer-1a | 116441260 | 116441282 | 152 | -13.94 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-381-3p | chr6 | 116438032 | 116438038 | 7mer-m8 | 116438016 | 116438039 | 150 | -18.22 |
| ADediting_291761 | chr11_93733708_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-1304-3p | chr6 | 116436215 | 116436221 | 7mer-m8 | 116436201 | 116436222 | 162 | -18.21 |
| ADediting_291761 | chr11_93733708_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-1304-3p | chr6 | 116436339 | 116436346 | 8mer-1a | 116436325 | 116436346 | 165 | -29.84 |
| ADediting_291761 | chr11_93733708_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-1304-3p | chr6 | 116436215 | 116436221 | 7mer-m8 | 116436201 | 116436222 | 162 | -18.21 |
| ADediting_291761 | chr11_93733708_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-1304-3p | chr6 | 116436339 | 116436346 | 8mer-1a | 116436325 | 116436346 | 165 | -29.84 |
| ADediting_496066 | chr15_66496985_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-4512 | chr6 | 116437143 | 116437149 | 7mer-1a | 116437128 | 116437149 | 140 | -19.09 |
| ADediting_496066 | chr15_66496985_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-4512 | chr6 | 116437143 | 116437149 | 7mer-1a | 116437128 | 116437149 | 140 | -19.09 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-5581-3p | chr6 | 116439037 | 116439043 | 7mer-m8 | 116439023 | 116439044 | 142 | -10.8 |
| ADediting_107020 | chr1_37500952_- | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-5581-3p | chr6 | 116439037 | 116439043 | 7mer-m8 | 116439023 | 116439044 | 142 | -10.8 |
| ADediting_107020 | chr1_37500952_- | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-5581-3p | chr6 | 116439037 | 116439043 | 7mer-m8 | 116439023 | 116439044 | 142 | -10.8 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-589-3p | chr6 | 116440103 | 116440109 | 7mer-m8 | 116440091 | 116440110 | 143 | -19.6 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-589-3p | chr6 | 116440103 | 116440109 | 7mer-m8 | 116440091 | 116440110 | 143 | -19.6 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-589-3p | chr6 | 116440103 | 116440109 | 7mer-m8 | 116440091 | 116440110 | 143 | -19.6 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4477b | chr6 | 116439466 | 116439473 | 8mer-1a | 116439452 | 116439473 | 148 | -8.71 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4477b | chr6 | 116439466 | 116439473 | 8mer-1a | 116439452 | 116439473 | 148 | -8.71 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4477b | chr6 | 116444594 | 116444600 | 7mer-m8 | 116444583 | 116444601 | 143 | -8.34 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4477b | chr6 | 116439466 | 116439473 | 8mer-1a | 116439452 | 116439473 | 148 | -8.71 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4477b | chr6 | 116444594 | 116444600 | 7mer-m8 | 116444583 | 116444601 | 143 | -8.34 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4477b | chr6 | 116439466 | 116439473 | 8mer-1a | 116439452 | 116439473 | 148 | -8.71 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4477b | chr6 | 116439466 | 116439473 | 8mer-1a | 116439452 | 116439473 | 148 | -8.71 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4477b | chr6 | 116444594 | 116444600 | 7mer-m8 | 116444583 | 116444601 | 143 | -8.34 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4477b | chr6 | 116439466 | 116439473 | 8mer-1a | 116439452 | 116439473 | 148 | -8.71 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4477b | chr6 | 116444594 | 116444600 | 7mer-m8 | 116444583 | 116444601 | 143 | -8.34 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-641 | chr6 | 116440215 | 116440222 | 8mer-1a | 116440199 | 116440222 | 150 | -13.97 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-641 | chr6 | 116437266 | 116437272 | 7mer-m8 | 116437250 | 116437273 | 140 | -12.4 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-641 | chr6 | 116440215 | 116440222 | 8mer-1a | 116440199 | 116440222 | 150 | -13.97 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-641 | chr6 | 116440215 | 116440222 | 8mer-1a | 116440199 | 116440222 | 150 | -13.97 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-641 | chr6 | 116437266 | 116437272 | 7mer-m8 | 116437250 | 116437273 | 140 | -12.4 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-556-3p | chr6 | 116443864 | 116443871 | 8mer-1a | 116443850 | 116443871 | 155 | -11.68 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-556-3p | chr6 | 116443864 | 116443871 | 8mer-1a | 116443850 | 116443871 | 155 | -11.68 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-641 | chr6 | 116440215 | 116440222 | 8mer-1a | 116440199 | 116440222 | 150 | -13.97 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-641 | chr6 | 116437266 | 116437272 | 7mer-m8 | 116437250 | 116437273 | 140 | -12.4 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-641 | chr6 | 116440215 | 116440222 | 8mer-1a | 116440199 | 116440222 | 150 | -13.97 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-641 | chr6 | 116440215 | 116440222 | 8mer-1a | 116440199 | 116440222 | 150 | -13.97 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-641 | chr6 | 116437266 | 116437272 | 7mer-m8 | 116437250 | 116437273 | 140 | -12.4 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-5682 | chr6 | 116441575 | 116441581 | 7mer-m8 | 116441561 | 116441582 | 145 | -13.44 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-5682 | chr6 | 116441575 | 116441581 | 7mer-m8 | 116441561 | 116441582 | 145 | -13.44 |
| ADediting_496066 | chr15_66496985_- | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4512 | chr6 | 116442155 | 116442161 | 7mer-m8 | 116442138 | 116442162 | 144 | -21.93 |
| ADediting_496066 | chr15_66496985_- | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4512 | chr6 | 116442155 | 116442161 | 7mer-m8 | 116442138 | 116442162 | 144 | -21.93 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4775 | chr6 | 116439192 | 116439198 | 7mer-m8 | 116439178 | 116439199 | 154 | -5.31 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4775 | chr6 | 116439419 | 116439425 | 7mer-m8 | 116439402 | 116439426 | 149 | -7.13 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-4775 | chr6 | 116440295 | 116440301 | 7mer-m8 | 116440281 | 116440302 | 151 | -6.07 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4775 | chr6 | 116439192 | 116439198 | 7mer-m8 | 116439178 | 116439199 | 154 | -5.31 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4775 | chr6 | 116439419 | 116439425 | 7mer-m8 | 116439402 | 116439426 | 149 | -7.13 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4775 | chr6 | 116440295 | 116440301 | 7mer-m8 | 116440281 | 116440302 | 151 | -6.07 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-4775 | chr6 | 116444571 | 116444578 | 8mer-1a | 116444557 | 116444578 | 140 | -6.48 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4775 | chr6 | 116439192 | 116439198 | 7mer-m8 | 116439178 | 116439199 | 154 | -5.31 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4775 | chr6 | 116439419 | 116439425 | 7mer-m8 | 116439402 | 116439426 | 149 | -7.13 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4775 | chr6 | 116440295 | 116440301 | 7mer-m8 | 116440281 | 116440302 | 151 | -6.07 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-4775 | chr6 | 116444571 | 116444578 | 8mer-1a | 116444557 | 116444578 | 140 | -6.48 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000111817.17 | ENST00000331677.7 | DSE-201 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000111817.17 | ENST00000359564.3 | DSE-202 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000111817.17 | ENST00000452085.7 | DSE-206 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000111817.17 | ENST00000644252.1 | DSE-213 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000111817.17 | ENST00000646710.1 | DSE-216 | hsa-miR-5585-3p | chr6 | 116437902 | 116437908 | 7mer-m8 | 116437888 | 116437909 | 147 | -19.58 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for DSE |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000452085.7 | protein_coding |  |  |
| ENST00000331677.7 | protein_coding |  |  |
| ENST00000644252.1 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1226845 | ENST00000452085.7 | chr6_116439867_+ | 5593 | -2949.90 | -2945.30 | -2959.70 |
| ADediting_1226846 | ENST00000452085.7 | chr6_116439883_+ | 5609 | -2944.60 | -2945.30 | -2959.70 |
| ADediting_1226847 | ENST00000452085.7 | chr6_116439891_+ | 5617 | -2942.30 | -2945.30 | -2959.70 |
| ADediting_1226848 | ENST00000452085.7 | chr6_116440347_+ | 6073 | -2952.20 | -2945.30 | -2959.70 |
| ADediting_1226849 | ENST00000452085.7 | chr6_116440398_+ | 6124 | -2951.90 | -2945.30 | -2959.70 |
| ADediting_1226845 | ENST00000331677.7 | chr6_116439867_+ | 5843 | -2078.00 | -2073.40 | -2087.80 |
| ADediting_1226846 | ENST00000331677.7 | chr6_116439883_+ | 5859 | -2072.70 | -2073.40 | -2087.80 |
| ADediting_1226847 | ENST00000331677.7 | chr6_116439891_+ | 5867 | -2070.40 | -2073.40 | -2087.80 |
| ADediting_1226848 | ENST00000331677.7 | chr6_116440347_+ | 6323 | -2080.30 | -2073.40 | -2087.80 |
| ADediting_1226849 | ENST00000331677.7 | chr6_116440398_+ | 6374 | -2080.00 | -2073.40 | -2087.80 |
| ADediting_1226845 | ENST00000644252.1 | chr6_116439867_+ | 5627 | -2996.10 | -2991.50 | -3005.90 |
| ADediting_1226846 | ENST00000644252.1 | chr6_116439883_+ | 5643 | -2990.80 | -2991.50 | -3005.90 |
| ADediting_1226847 | ENST00000644252.1 | chr6_116439891_+ | 5651 | -2988.50 | -2991.50 | -3005.90 |
| ADediting_1226848 | ENST00000644252.1 | chr6_116440347_+ | 6107 | -2998.40 | -2991.50 | -3005.90 |
| ADediting_1226849 | ENST00000644252.1 | chr6_116440398_+ | 6158 | -2998.10 | -2991.50 | -3005.90 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for DSE |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.82616022991453e-13 | 0.401934561249213 | 0.000136187671508895 | 0.215006098132034 | 0.013003167883031 | 0.140928304058095 |
| AC | 1.60638072050501e-36 | 0.688906053061668 | 1.21833222493919e-19 | 0.531638950186197 | 1.74269458572822e-17 | 0.503648225325571 |
| PCC | 0.0770546679205109 | 0.12824374037314 | 0.131566913729121 | 0.109501976979717 | 9.20487576695514e-09 | 0.400752782761307 |
| CER | 1.72979499614875e-18 | 0.637610158398095 | 6.73152896937124e-13 | 0.54338509938304 | 8.42583512169667e-06 | 0.354741903886795 |
| TCX | 5.42118303261946e-09 | 0.453905083782846 | 0.75425109141258 | 0.0257708601106073 | 2.21276930215054e-09 | 0.464073801858106 |
| FP | 1.16214898644742e-12 | 0.500244907932039 | 1.54380952433336e-16 | 0.567129816945862 | 1.23597330925973e-05 | 0.321171560786457 |
| IFG | 0.0413784788600501 | 0.410766983051117 | 0.0167190623372582 | 0.473849341930794 | 0.0265423868066309 | 0.443066727895365 |
| PG | 6.5494478095457e-26 | 0.67322191565237 | 8.25063468255114e-17 | 0.560975045960885 | 0.0725303232197865 | 0.131985718359817 |
| STG | 0.00137175082968103 | 0.34365520206726 | 0.0335886294170516 | 0.232154693792949 | 3.39033461432769e-05 | 0.435997646260757 |
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Relation with AD stages for DSE |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.77402370441038e-07 | 0.470499110550276 |
| TCX | 3.48792614004622e-12 | 0.611078014268936 |
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RelatedDrugs for DSE |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DSE |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| DSE | C0013720 | Ehlers-Danlos Syndrome | 5 | GENOMICS_ENGLAND |
| DSE | C3809845 | EHLERS-DANLOS SYNDROME, MUSCULOCONTRACTURAL TYPE, 2 | 1 | CTD_human;UNIPROT |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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