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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for GTF2F1

check button Gene summary
Gene informationGene symbol

GTF2F1

Gene ID

2962

Gene namegeneral transcription factor IIF subunit 1
SynonymsBTF4|RAP74|TF2F1|TFIIF
Cytomap

19p13.3

Type of geneprotein-coding
Descriptiongeneral transcription factor IIF subunit 1TFIIF-alphageneral transcription factor IIF 74 kDa subunitgeneral transcription factor IIF, polypeptide 1, 74kDatranscription initiation factor IIF subunit alphatranscription initiation factor RAP74
Modification date20200313
UniProtAcc

P35269,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for GTF2F1

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_790109(6379622, -), ADediting_790110(6379671, -), ADediting_790111(6379672, -), ADediting_790112(6379677, -), ADediting_790113(6379707, -), ADediting_790114(6379786, -), ADediting_790115(6379856, -), ADediting_790116(6379865, -), ADediting_790117(6382964, -), ADediting_790118(6383013, -), ADediting_790119(6383030, -), ADediting_790120(6383129, -), ADediting_790121(6383139, -), ADediting_790122(6383889, -), ADediting_790123(6383893, -), ADediting_790124(6383935, -), ADediting_790125(6383961, -), ADediting_790126(6384000, -), ADediting_790127(6384073, -), ADediting_790128(6384074, -), ADediting_790129(6384251, -), ADediting_790130(6384263, -), ADediting_790131(6384380, -), ADediting_790132(6384386, -), ADediting_790133(6384392, -), ADediting_790134(6384456, -), ADediting_790135(6384461, -), ADediting_790136(6384813, -), ADediting_790137(6384844, -), ADediting_790138(6384846, -), ADediting_790139(6384916, -), ADediting_790140(6384921, -), ADediting_790141(6384922, -), ADediting_790142(6384928, -), ADediting_790143(6384940, -), ADediting_790144(6384944, -), ADediting_790145(6384948, -), ADediting_790146(6384959, -), ADediting_790147(6384960, -), ADediting_790148(6385027, -), ADediting_790149(6385033, -), ADediting_790150(6385224, -), ADediting_790151(6385246, -), ADediting_790152(6385247, -), ADediting_790153(6385954, -), ADediting_790154(6386175, -), ADediting_790155(6386183, -), ADediting_790156(6386202, -), ADediting_790157(6386213, -), ADediting_790158(6386228, -), ADediting_790159(6386262, -), ADediting_790160(6386301, -), ADediting_790161(6386305, -), ADediting_790162(6386306, -), ADediting_790163(6386573, -), ADediting_790164(6386582, -), ADediting_790165(6386600, -), ADediting_790166(6386608, -), ADediting_790167(6386648, -), ADediting_790168(6386672, -), ADediting_790169(6389048, -), ADediting_790170(6389067, -), ADediting_790171(6389149, -), ADediting_790172(6389195, -), ADediting_790173(6391577, -), ADediting_1559793(6383859, -), ADediting_1559794(6384396, -), ADediting_1559795(6384445, -), ADediting_1559796(6385210, -), ADediting_1559797(6385229, -), ADediting_1559798(6385232, -), ADediting_1559799(6385283, -), ADediting_1559800(6385348, -), ADediting_1559801(6387987, -), ADediting_1559802(6391686, -), ADediting_1559803(6391732, -), ADediting_1559804(6391739, -), ADediting_1631754(6379731, -), ADediting_1631755(6379810, -),

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RNA editing positional annotations for GTF2F1 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_790109chr19_6379622_-UTR3
ADediting_790110chr19_6379671_-UTR3
ADediting_790111chr19_6379672_-UTR3
ADediting_790112chr19_6379677_-UTR3
ADediting_790113chr19_6379707_-UTR3
ADediting_790114chr19_6379786_-UTR3
ADediting_790115chr19_6379856_-UTR3
ADediting_790116chr19_6379865_-UTR3
ADediting_790117chr19_6382964_-intronic
ADediting_790118chr19_6383013_-intronic
ADediting_790119chr19_6383030_-intronic
ADediting_790120chr19_6383129_-intronic
ADediting_790121chr19_6383139_-intronic
ADediting_790122chr19_6383889_-intronic
ADediting_790123chr19_6383893_-intronic
ADediting_790124chr19_6383935_-intronic
ADediting_790125chr19_6383961_-intronic
ADediting_790126chr19_6384000_-intronic
ADediting_790127chr19_6384073_-intronic
ADediting_790128chr19_6384074_-intronic
ADediting_790129chr19_6384251_-intronic
ADediting_790130chr19_6384263_-intronic
ADediting_790131chr19_6384380_-intronic
ADediting_790132chr19_6384386_-intronic
ADediting_790133chr19_6384392_-intronic
ADediting_790134chr19_6384456_-intronic
ADediting_790135chr19_6384461_-intronic
ADediting_790136chr19_6384813_-intronic
ADediting_790137chr19_6384844_-intronic
ADediting_790138chr19_6384846_-intronic
ADediting_790139chr19_6384916_-intronic
ADediting_790140chr19_6384921_-intronic
ADediting_790141chr19_6384922_-intronic
ADediting_790142chr19_6384928_-intronic
ADediting_790143chr19_6384940_-intronic
ADediting_790144chr19_6384944_-intronic
ADediting_790145chr19_6384948_-intronic
ADediting_790146chr19_6384959_-intronic
ADediting_790147chr19_6384960_-intronic
ADediting_790148chr19_6385027_-intronic
ADediting_790149chr19_6385033_-intronic
ADediting_790150chr19_6385224_-intronic
ADediting_790151chr19_6385246_-intronic
ADediting_790152chr19_6385247_-intronic
ADediting_790153chr19_6385954_-intronic
ADediting_790154chr19_6386175_-intronic
ADediting_790155chr19_6386183_-intronic
ADediting_790156chr19_6386202_-intronic
ADediting_790157chr19_6386213_-intronic
ADediting_790158chr19_6386228_-intronic
ADediting_790159chr19_6386262_-intronic
ADediting_790160chr19_6386301_-intronic
ADediting_790161chr19_6386305_-intronic
ADediting_790162chr19_6386306_-intronic
ADediting_790163chr19_6386573_-intronic
ADediting_790164chr19_6386582_-intronic
ADediting_790165chr19_6386600_-intronic
ADediting_790166chr19_6386608_-intronic
ADediting_790167chr19_6386648_-intronic
ADediting_790168chr19_6386672_-intronic
ADediting_790169chr19_6389048_-ncRNA_intronic
ADediting_790170chr19_6389067_-ncRNA_intronic
ADediting_790171chr19_6389149_-ncRNA_intronic
ADediting_790172chr19_6389195_-ncRNA_intronic
ADediting_790173chr19_6391577_-intronic
ADediting_1559793chr19_6383859_-intronic
ADediting_1559794chr19_6384396_-intronic
ADediting_1559795chr19_6384445_-intronic
ADediting_1559796chr19_6385210_-intronic
ADediting_1559797chr19_6385229_-intronic
ADediting_1559798chr19_6385232_-intronic
ADediting_1559799chr19_6385283_-intronic
ADediting_1559800chr19_6385348_-intronic
ADediting_1559801chr19_6387987_-ncRNA_intronic
ADediting_1559802chr19_6391686_-intronic
ADediting_1559803chr19_6391732_-intronic
ADediting_1559804chr19_6391739_-intronic
ADediting_1631754chr19_6379731_-UTR3
ADediting_1631755chr19_6379810_-UTR3

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_790109chr19_6379622_-SINEAluName=AluSx3
ADediting_790110chr19_6379671_-SINEAluName=AluSx3
ADediting_790111chr19_6379672_-SINEAluName=AluSx3
ADediting_790112chr19_6379677_-SINEAluName=AluSx3
ADediting_790113chr19_6379707_-SINEAluName=AluSx3
ADediting_790114chr19_6379786_-SINEAluName=AluSx3
ADediting_790115chr19_6379856_-SINEAluName=AluSx3
ADediting_790116chr19_6379865_-SINEAluName=AluSx3
ADediting_790117chr19_6382964_-SINEAluName=AluSx
ADediting_790118chr19_6383013_-SINEAluName=AluSx
ADediting_790119chr19_6383030_-SINEAluName=AluSx
ADediting_790120chr19_6383129_-SINEAluName=AluSx
ADediting_790121chr19_6383139_-SINEAluName=AluSx
ADediting_790122chr19_6383889_-SINEAluName=AluSx3
ADediting_790123chr19_6383893_-SINEAluName=AluSx3
ADediting_790124chr19_6383935_-SINEAluName=AluSx3
ADediting_790125chr19_6383961_-SINEAluName=AluSx3
ADediting_790126chr19_6384000_-SINEAluName=AluSx3
ADediting_790127chr19_6384073_-SINEAluName=AluSx3
ADediting_790128chr19_6384074_-SINEAluName=AluSx3
ADediting_790129chr19_6384251_-SINEAluName=AluSx
ADediting_790130chr19_6384263_-SINEAluName=AluSx
ADediting_790131chr19_6384380_-SINEAluName=AluSx
ADediting_790132chr19_6384386_-SINEAluName=AluSx
ADediting_790133chr19_6384392_-SINEAluName=AluSx
ADediting_790134chr19_6384456_-SINEAluName=AluSx
ADediting_790135chr19_6384461_-SINEAluName=AluSx
ADediting_790136chr19_6384813_-SINEAluName=AluSx
ADediting_790137chr19_6384844_-SINEAluName=AluSx
ADediting_790138chr19_6384846_-SINEAluName=AluSx
ADediting_790139chr19_6384916_-SINEAluName=AluSx
ADediting_790140chr19_6384921_-SINEAluName=AluSx
ADediting_790141chr19_6384922_-SINEAluName=AluSx
ADediting_790142chr19_6384928_-SINEAluName=AluSx
ADediting_790143chr19_6384940_-SINEAluName=AluSx
ADediting_790144chr19_6384944_-SINEAluName=AluSx
ADediting_790145chr19_6384948_-SINEAluName=AluSx
ADediting_790146chr19_6384959_-SINEAluName=AluSx
ADediting_790147chr19_6384960_-SINEAluName=AluSx
ADediting_790148chr19_6385027_-SINEAluName=AluSx
ADediting_790149chr19_6385033_-SINEAluName=AluSx
ADediting_790150chr19_6385224_-SINEAluName=AluSz
ADediting_790151chr19_6385246_-SINEAluName=AluSz
ADediting_790152chr19_6385247_-SINEAluName=AluSz
ADediting_790153chr19_6385954_-SINEAluName=AluYc
ADediting_790154chr19_6386175_-SINEAluName=AluSq
ADediting_790155chr19_6386183_-SINEAluName=AluSq
ADediting_790156chr19_6386202_-SINEAluName=AluSq
ADediting_790157chr19_6386213_-SINEAluName=AluSq
ADediting_790158chr19_6386228_-SINEAluName=AluSq
ADediting_790159chr19_6386262_-SINEAluName=AluSq
ADediting_790160chr19_6386301_-SINEAluName=AluSq
ADediting_790161chr19_6386305_-SINEAluName=AluSq
ADediting_790162chr19_6386306_-SINEAluName=AluSq
ADediting_790163chr19_6386573_-SINEAluName=AluY
ADediting_790164chr19_6386582_-SINEAluName=AluY
ADediting_790165chr19_6386600_-SINEAluName=AluY
ADediting_790166chr19_6386608_-SINEAluName=AluY
ADediting_790167chr19_6386648_-SINEAluName=AluY
ADediting_790168chr19_6386672_-SINEAluName=AluY
ADediting_790169chr19_6389048_-SINEAluName=AluSx1
ADediting_790170chr19_6389067_-SINEAluName=AluSx1
ADediting_790171chr19_6389149_-SINEAluName=AluSx1
ADediting_790172chr19_6389195_-SINEAluName=AluSx1
ADediting_790173chr19_6391577_-SINEAluName=AluJr4
ADediting_1559793chr19_6383859_-SINEAluName=AluSx3
ADediting_1559794chr19_6384396_-SINEAluName=AluSx
ADediting_1559795chr19_6384445_-SINEAluName=AluSx
ADediting_1559796chr19_6385210_-SINEAluName=AluSz
ADediting_1559797chr19_6385229_-SINEAluName=AluSz
ADediting_1559798chr19_6385232_-SINEAluName=AluSz
ADediting_1559799chr19_6385283_-SINEAluName=AluSz
ADediting_1559800chr19_6385348_-SINEAluName=AluSz
ADediting_1559801chr19_6387987_-SINEAluName=AluSx1
ADediting_1559802chr19_6391686_-SINEAluName=AluJr4
ADediting_1559803chr19_6391732_-SINEAluName=AluJr4
ADediting_1559804chr19_6391739_-SINEAluName=AluJr4
ADediting_1631754chr19_6379731_-SINEAluName=AluSx3
ADediting_1631755chr19_6379810_-SINEAluName=AluSx3

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RNA A-to-I editing events in the alternative splicing sites for GTF2F1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GTF2F1

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for GTF2F1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GTF2F1

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1631755chr19_6379810_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-7705chr19637980663798127mer-m863798056379824147-16.48
ADediting_790109chr19_6379622_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-4743-5pchr19637961963796257mer-m863796186379640147-23.99
ADediting_790110chr19_6379671_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-3155achr19637966763796737mer-m863796666379684146-24.12
ADediting_790110chr19_6379671_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-3155bchr19637966763796737mer-m863796666379681145-24.12
ADediting_790110chr19_6379671_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-484chr19637966763796737mer-m863796666379687148-21.11
ADediting_790111chr19_6379672_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-9900chr19637966763796737mer-m863796666379685155-16.4
ADediting_790114chr19_6379786_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-4743-5pchr19637978363797897mer-m863797826379804145-26.64
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6886-5pchr19637985563798617mer-m863798546379874146-19.26
ADediting_790116chr19_6379865_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6789-3pchr19637986063798667mer-m863798596379881148-26.43

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1631754chr19_6379731_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6872-3pchr19637972863797347mer-m863797276379748149-17.21
ADediting_790109chr19_6379622_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-3652chr19637961963796257mer-m863796186379637148-20.61
ADediting_790113chr19_6379707_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-1207-3pchr19637970363797097mer-m863797026379719140-13.17
ADediting_790113chr19_6379707_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-1302chr19637970763797137mer-m863797066379729149-20.02
ADediting_790113chr19_6379707_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-4298chr19637970763797137mer-m863797066379727153-26.61
ADediting_790114chr19_6379786_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-3652chr19637978363797897mer-m863797826379801144-18.32
ADediting_790114chr19_6379786_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6128chr19637978563797917mer-m863797846379801148-13.28
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-10394-5pchr19637985563798617mer-m863798546379879153-22.24
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-1205chr19637985563798617mer-m863798546379874152-18.03
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-1288-3pchr19637985263798587mer-m863798516379871140-14.45
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-3199chr19637985063798578mer-1a63798506379872145-18.83
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-4418chr19637985463798607mer-m863798536379871155-23.6
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-509-5pchr19637985463798607mer-m863798536379873151-15.04
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6511b-5pchr19637985663798627mer-m863798556379878140-19.86
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6811-5pchr19637985663798627mer-m863798556379875146-16.01
ADediting_790115chr19_6379856_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-8052chr19637985063798578mer-1a63798506379870154-23.1
ADediting_790116chr19_6379865_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6511a-3pchr19637986463798707mer-m863798636379885154-22.7
ADediting_790116chr19_6379865_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-6511b-3pchr19637986463798707mer-m863798636379886146-20.21

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1471004chr9_63819627_+ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-4477bchr19637993763799437mer-m863799366379957140-10.85
ADediting_1471004chr9_63819627_+ENSG00000125651.14ENST00000593678.5GTF2F1-202hsa-miR-4477bchr19637993763799437mer-m863799366379957140-10.85
ADediting_286380chr11_79422188_-ENSG00000125651.14ENST00000394456.10GTF2F1-201hsa-miR-5579-3pchr19638008863800947mer-m863800876380107154-16.33
ADediting_286380chr11_79422188_-ENSG00000125651.14ENST00000593678.5GTF2F1-202hsa-miR-5579-3pchr19638008863800947mer-m863800876380107154-16.33

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GTF2F1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000394456.10protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_790109ENST00000394456.10chr19_6379622_-2382-939.70-934.90-953.80
ADediting_790110ENST00000394456.10chr19_6379671_-2333-938.20-934.90-953.80
ADediting_790111ENST00000394456.10chr19_6379672_-2332-936.50-934.90-953.80
ADediting_790112ENST00000394456.10chr19_6379677_-2327-935.50-934.90-953.80
ADediting_790113ENST00000394456.10chr19_6379707_-2297-936.90-934.90-953.80
ADediting_1631754ENST00000394456.10chr19_6379731_-2273-935.70-934.90-953.80
ADediting_790114ENST00000394456.10chr19_6379786_-2218-940.10-934.90-953.80
ADediting_1631755ENST00000394456.10chr19_6379810_-2194-937.40-934.90-953.80
ADediting_790115ENST00000394456.10chr19_6379856_-2148-934.80-934.90-953.80
ADediting_790116ENST00000394456.10chr19_6379865_-2139-938.10-934.90-953.80

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for GTF2F1

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
CERADediting_790110chr19_6379671_-3.08897609537368e-050.333230215491816.05294634694373e-110.5018575889845921.46946454200023e-070.413291084559327
CERADediting_790111chr19_6379672_-3.133563297589e-050.3329838243628038.19795215095234e-080.4208735680655792.00115221172508e-050.340596277599667
TCXADediting_790111chr19_6379672_-0.007433629923064450.217749732467050.0001305709855700030.3073186530665410.318860464546183-0.0819370642961034
CERADediting_790112chr19_6379677_-0.001612119869156710.255352382415682.31232514364432e-050.3381645871848140.01484152070029560.19859268217445
CERADediting_790115chr19_6379856_-0.0007863007746788220.2712553801794261.35309249124032e-080.4431701902956890.0004441545743585250.283255691056354
CERADediting_790116chr19_6379865_-0.06717394445895740.1498688297771113.58735815505775e-050.3306481730358710.03800086109886750.169599899232653

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC4.03669744551564e-520.7265188397497887.58297353637622e-600.7610630751416969.4497056783234e-140.406293372739287
AC5.64548436487837e-1030.9201562642130828.52505002551834e-680.8399898192977681.17169043651579e-140.46254672812503
PCC8.90258404225438e-640.8823422340639446.30601500716287e-630.8797151710345250.01797434620353780.171067286668635
CER4.49907433204023e-130.5468424313021646.61547473681885e-120.522995447000430.3911231168281740.0705240344956232
TCX1.68461826670351e-320.7843519386719821.66313824294191e-380.8249736570386010.481523426618355-0.0579056348125739
FP1.70210045291831e-280.7089857471774615.8287197255907e-080.3928477636273240.0001063706879613530.286396155116578
IFG1.64382111297465e-100.9144506296610841.49988936765927e-060.8011153890983260.2350609100868810.246416368975453
PG0.001025385152813860.2388709247057661.01725684336305e-050.317346259310840.3838703401079070.0642161860525914
STG7.29405968775196e-180.7727570474075443.31092593870644e-100.6195803947860580.3120247734343010.111634704629049

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Relation with AD stages for GTF2F1

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_790110chr19_6379671_-1.64000296869594e-060.442363479051695
CERADediting_790111chr19_6379672_-0.0007311526965743920.320139253243477
CERADediting_790115chr19_6379856_-5.97175060780693e-050.376321098045312
TCXADediting_790110chr19_6379671_-0.0006812916667487640.324803606942635

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.

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RelatedDrugs for GTF2F1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GTF2F1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource