ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for OSTM1

Gene summary

Gene information	Gene symbol	OSTM1
	Gene ID	28962
	Gene name	osteoclastogenesis associated transmembrane protein 1
	Synonyms	GIPN\|GL\|HSPC019\|OPTB5
	Cytomap	6q21
	Type of gene	protein-coding
	Description	osteopetrosis-associated transmembrane protein 1CLCN7 accessory beta subunitGAIP-interacting protein N terminuschloride channel 7 beta subunitgrey-lethal osteopetrosisosteopetrosis associated transmembrane protein 1
	Modification date	20200313
	UniProtAcc	Q86WC4,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for OSTM1

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_1221904(108042166, -), ADediting_1221905(108042167, -), ADediting_1221906(108042169, -), ADediting_1221907(108042172, -), ADediting_1221908(108042173, -), ADediting_1221909(108042175, -), ADediting_1221910(108042187, -), ADediting_1221911(108042188, -), ADediting_1221912(108042189, -), ADediting_1221913(108042197, -), ADediting_1221914(108042210, -), ADediting_1221915(108042212, -), ADediting_1221916(108042214, -), ADediting_1221917(108042215, -), ADediting_1221918(108042220, -), ADediting_1221919(108042239, -), ADediting_1221920(108042249, -), ADediting_1221921(108042252, -), ADediting_1221922(108042260, -), ADediting_1221923(108042264, -), ADediting_1221924(108042266, -), ADediting_1221925(108042422, -), ADediting_1221926(108042537, -), ADediting_1221927(108042554, -), ADediting_1221928(108042563, -), ADediting_1221929(108042572, -), ADediting_1221930(108042595, -), ADediting_1221931(108042609, -), ADediting_1221932(108042610, -), ADediting_1221933(108042615, -), ADediting_1221934(108042617, -), ADediting_1221935(108042619, -), ADediting_1221936(108042632, -), ADediting_1221937(108042661, -), ADediting_1221938(108042685, -), ADediting_1221939(108042691, -), ADediting_1221940(108042693, -), ADediting_1221941(108052190, -), ADediting_1221942(108052205, -), ADediting_1221943(108052245, -), ADediting_1221944(108052253, -), ADediting_1221945(108052267, -), ADediting_1221946(108052333, -), ADediting_1221947(108052621, -), ADediting_1221948(108052622, -), ADediting_1221949(108053043, -), ADediting_1221950(108053626, -), ADediting_1221951(108053630, -), ADediting_1221952(108053634, -), ADediting_1221953(108053635, -), ADediting_1221954(108053636, -), ADediting_1221955(108053639, -), ADediting_1221956(108053642, -), ADediting_1221957(108053643, -), ADediting_1221958(108053644, -), ADediting_1221959(108053645, -), ADediting_1221960(108053659, -), ADediting_1221961(108053661, -), ADediting_1221962(108053670, -), ADediting_1221963(108053678, -), ADediting_1221964(108053693, -), ADediting_1221965(108053708, -), ADediting_1221966(108053712, -), ADediting_1221967(108053717, -), ADediting_1221968(108053741, -), ADediting_1221969(108056968, -), ADediting_1221970(108056969, -), ADediting_1221971(108056990, -), ADediting_1221972(108056992, -), ADediting_1221973(108057037, -), ADediting_1221974(108057106, -), ADediting_1221975(108057177, -), ADediting_1221976(108057195, -), ADediting_1221977(108057215, -), ADediting_1221978(108060473, -), ADediting_1221979(108060475, -), ADediting_1221980(108060507, -), ADediting_1221981(108060526, -), ADediting_1221982(108060593, -), ADediting_1221983(108060608, -), ADediting_1221984(108060617, -), ADediting_1221985(108060623, -), ADediting_1221986(108060634, -), ADediting_1221987(108060657, -), ADediting_1221988(108060672, -), ADediting_1221989(108060683, -), ADediting_1221990(108061568, -), ADediting_1221991(108061594, -), ADediting_1221992(108061604, -), ADediting_1221993(108061618, -), ADediting_1221994(108061636, -), ADediting_1221995(108061664, -), ADediting_1221996(108061666, -), ADediting_1221997(108061690, -), ADediting_1221998(108061761, -), ADediting_1221999(108061770, -), ADediting_1222000(108061775, -), ADediting_1222001(108061802, -), ADediting_1222002(108061824, -), ADediting_1222003(108062580, -), ADediting_1222004(108062658, -), ADediting_1222005(108062667, -), ADediting_1222006(108062677, -), ADediting_1222007(108062693, -), ADediting_1222008(108062701, -), ADediting_1222009(108062723, -), ADediting_1222010(108062736, -), ADediting_1222011(108062747, -), ADediting_1222012(108062801, -), ADediting_1222013(108062807, -), ADediting_1222014(108062809, -), ADediting_1222015(108063219, -), ADediting_1222016(108066474, -), ADediting_1222017(108066548, -), ADediting_1222018(108066572, -), ADediting_1222019(108066587, -), ADediting_1222020(108066599, -), ADediting_1222021(108066612, -), ADediting_1222022(108066625, -), ADediting_1222023(108066632, -), ADediting_1222024(108066713, -), ADediting_1222025(108066749, -), ADediting_1222026(108067915, -), ADediting_1222027(108067916, -), ADediting_1222028(108067940, -), ADediting_1222029(108067948, -), ADediting_1222030(108067953, -), ADediting_1222031(108067964, -), ADediting_1222032(108067980, -), ADediting_1222033(108068004, -), ADediting_1222034(108068013, -), ADediting_1222035(108068084, -), ADediting_1222036(108068107, -), ADediting_1222037(108068116, -), ADediting_1222038(108068137, -), ADediting_1222039(108068142, -), ADediting_1222040(108068169, -), ADediting_1222041(108068172, -), ADediting_1222042(108068173, -), ADediting_1222043(108068174, -), ADediting_1222044(108068204, -), ADediting_1222045(108070067, -), ADediting_1222046(108070135, -), ADediting_1222047(108070143, -), ADediting_1222048(108070198, -), ADediting_1222049(108070218, -), ADediting_1222050(108070221, -), ADediting_1222051(108070234, -), ADediting_1222052(108070235, -), ADediting_1222053(108070242, -), ADediting_1222054(108070247, -), ADediting_1222055(108070673, -), ADediting_1222056(108070984, -), ADediting_1222057(108070995, -), ADediting_1222058(108070999, -), ADediting_1222059(108071007, -), ADediting_1222060(108071032, -), ADediting_1222061(108071112, -), ADediting_1222062(108071136, -), ADediting_1222063(108071182, -), ADediting_1222064(108071335, -), ADediting_1222065(108071360, -), ADediting_1222066(108071369, -), ADediting_1222067(108071373, -), ADediting_1222068(108071374, -), ADediting_1222069(108071402, -), ADediting_1222070(108071403, -), ADediting_1222071(108071411, -), ADediting_1222072(108071434, -), ADediting_1222073(108071458, -), ADediting_1222074(108071516, -), ADediting_1222075(108071517, -), ADediting_1222076(108071550, -), ADediting_1222077(108071585, -), ADediting_1222078(108071586, -), ADediting_1222079(108071608, -), ADediting_1222080(108072377, -), ADediting_1222081(108072399, -), ADediting_1222082(108072404, -), ADediting_1222083(108072412, -), ADediting_1222084(108072413, -), ADediting_1222085(108072416, -), ADediting_1222086(108072430, -), ADediting_1222087(108072442, -), ADediting_1222088(108072470, -), ADediting_1222089(108072481, -), ADediting_1222090(108072493, -), ADediting_1222091(108072521, -), ADediting_1222092(108072533, -), ADediting_1222093(108072550, -), ADediting_1222094(108072826, -), ADediting_1222095(108072841, -), ADediting_1222096(108072878, -), ADediting_1222097(108072886, -), ADediting_1222098(108072988, -), ADediting_1222099(108072991, -), ADediting_1222100(108073003, -), ADediting_1222101(108073047, -), ADediting_1222102(108073056, -), ADediting_1222103(108073077, -), ADediting_1222104(108073082, -), ADediting_1222105(108073083, -), ADediting_1582187(108042240, -), ADediting_1582188(108042462, -), ADediting_1582189(108042580, -), ADediting_1658731(108068048, -), ADediting_1658732(108068049, -), ADediting_1658733(108068061, -), ADediting_1658734(108068105, -), ADediting_1658735(108072389, -), ADediting_1658736(108072417, -),

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RNA editing positional annotations for OSTM1 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_1221904	chr6_108042166_-	UTR3
ADediting_1221905	chr6_108042167_-	UTR3
ADediting_1221906	chr6_108042169_-	UTR3
ADediting_1221907	chr6_108042172_-	UTR3
ADediting_1221908	chr6_108042173_-	UTR3
ADediting_1221909	chr6_108042175_-	UTR3
ADediting_1221910	chr6_108042187_-	UTR3
ADediting_1221911	chr6_108042188_-	UTR3
ADediting_1221912	chr6_108042189_-	UTR3
ADediting_1221913	chr6_108042197_-	UTR3
ADediting_1221914	chr6_108042210_-	UTR3
ADediting_1221915	chr6_108042212_-	UTR3
ADediting_1221916	chr6_108042214_-	UTR3
ADediting_1221917	chr6_108042215_-	UTR3
ADediting_1221918	chr6_108042220_-	UTR3
ADediting_1221919	chr6_108042239_-	UTR3
ADediting_1221920	chr6_108042249_-	UTR3
ADediting_1221921	chr6_108042252_-	UTR3
ADediting_1221922	chr6_108042260_-	UTR3
ADediting_1221923	chr6_108042264_-	UTR3
ADediting_1221924	chr6_108042266_-	UTR3
ADediting_1221925	chr6_108042422_-	UTR3
ADediting_1221926	chr6_108042537_-	UTR3
ADediting_1221927	chr6_108042554_-	UTR3
ADediting_1221928	chr6_108042563_-	UTR3
ADediting_1221929	chr6_108042572_-	UTR3
ADediting_1221930	chr6_108042595_-	UTR3
ADediting_1221931	chr6_108042609_-	UTR3
ADediting_1221932	chr6_108042610_-	UTR3
ADediting_1221933	chr6_108042615_-	UTR3
ADediting_1221934	chr6_108042617_-	UTR3
ADediting_1221935	chr6_108042619_-	UTR3
ADediting_1221936	chr6_108042632_-	UTR3
ADediting_1221937	chr6_108042661_-	UTR3
ADediting_1221938	chr6_108042685_-	UTR3
ADediting_1221939	chr6_108042691_-	UTR3
ADediting_1221940	chr6_108042693_-	UTR3
ADediting_1221941	chr6_108052190_-	intronic
ADediting_1221942	chr6_108052205_-	intronic
ADediting_1221943	chr6_108052245_-	intronic
ADediting_1221944	chr6_108052253_-	intronic
ADediting_1221945	chr6_108052267_-	intronic
ADediting_1221946	chr6_108052333_-	intronic
ADediting_1221947	chr6_108052621_-	intronic
ADediting_1221948	chr6_108052622_-	intronic
ADediting_1221949	chr6_108053043_-	intronic
ADediting_1221950	chr6_108053626_-	intronic
ADediting_1221951	chr6_108053630_-	intronic
ADediting_1221952	chr6_108053634_-	intronic
ADediting_1221953	chr6_108053635_-	intronic
ADediting_1221954	chr6_108053636_-	intronic
ADediting_1221955	chr6_108053639_-	intronic
ADediting_1221956	chr6_108053642_-	intronic
ADediting_1221957	chr6_108053643_-	intronic
ADediting_1221958	chr6_108053644_-	intronic
ADediting_1221959	chr6_108053645_-	intronic
ADediting_1221960	chr6_108053659_-	intronic
ADediting_1221961	chr6_108053661_-	intronic
ADediting_1221962	chr6_108053670_-	intronic
ADediting_1221963	chr6_108053678_-	intronic
ADediting_1221964	chr6_108053693_-	intronic
ADediting_1221965	chr6_108053708_-	intronic
ADediting_1221966	chr6_108053712_-	intronic
ADediting_1221967	chr6_108053717_-	intronic
ADediting_1221968	chr6_108053741_-	intronic
ADediting_1221969	chr6_108056968_-	intronic
ADediting_1221970	chr6_108056969_-	intronic
ADediting_1221971	chr6_108056990_-	intronic
ADediting_1221972	chr6_108056992_-	intronic
ADediting_1221973	chr6_108057037_-	intronic
ADediting_1221974	chr6_108057106_-	intronic
ADediting_1221975	chr6_108057177_-	intronic
ADediting_1221976	chr6_108057195_-	intronic
ADediting_1221977	chr6_108057215_-	intronic
ADediting_1221978	chr6_108060473_-	intronic
ADediting_1221979	chr6_108060475_-	intronic
ADediting_1221980	chr6_108060507_-	intronic
ADediting_1221981	chr6_108060526_-	intronic
ADediting_1221982	chr6_108060593_-	intronic
ADediting_1221983	chr6_108060608_-	intronic
ADediting_1221984	chr6_108060617_-	intronic
ADediting_1221985	chr6_108060623_-	intronic
ADediting_1221986	chr6_108060634_-	intronic
ADediting_1221987	chr6_108060657_-	intronic
ADediting_1221988	chr6_108060672_-	intronic
ADediting_1221989	chr6_108060683_-	intronic
ADediting_1221990	chr6_108061568_-	intronic
ADediting_1221991	chr6_108061594_-	intronic
ADediting_1221992	chr6_108061604_-	intronic
ADediting_1221993	chr6_108061618_-	intronic
ADediting_1221994	chr6_108061636_-	intronic
ADediting_1221995	chr6_108061664_-	intronic
ADediting_1221996	chr6_108061666_-	intronic
ADediting_1221997	chr6_108061690_-	intronic
ADediting_1221998	chr6_108061761_-	intronic
ADediting_1221999	chr6_108061770_-	intronic
ADediting_1222000	chr6_108061775_-	intronic
ADediting_1222001	chr6_108061802_-	intronic
ADediting_1222002	chr6_108061824_-	intronic
ADediting_1222003	chr6_108062580_-	intronic
ADediting_1222004	chr6_108062658_-	intronic
ADediting_1222005	chr6_108062667_-	intronic
ADediting_1222006	chr6_108062677_-	intronic
ADediting_1222007	chr6_108062693_-	intronic
ADediting_1222008	chr6_108062701_-	intronic
ADediting_1222009	chr6_108062723_-	intronic
ADediting_1222010	chr6_108062736_-	intronic
ADediting_1222011	chr6_108062747_-	intronic
ADediting_1222012	chr6_108062801_-	intronic
ADediting_1222013	chr6_108062807_-	intronic
ADediting_1222014	chr6_108062809_-	intronic
ADediting_1222015	chr6_108063219_-	intronic
ADediting_1222016	chr6_108066474_-	intronic
ADediting_1222017	chr6_108066548_-	intronic
ADediting_1222018	chr6_108066572_-	intronic
ADediting_1222019	chr6_108066587_-	intronic
ADediting_1222020	chr6_108066599_-	intronic
ADediting_1222021	chr6_108066612_-	intronic
ADediting_1222022	chr6_108066625_-	intronic
ADediting_1222023	chr6_108066632_-	intronic
ADediting_1222024	chr6_108066713_-	intronic
ADediting_1222025	chr6_108066749_-	intronic
ADediting_1222026	chr6_108067915_-	intronic
ADediting_1222027	chr6_108067916_-	intronic
ADediting_1222028	chr6_108067940_-	intronic
ADediting_1222029	chr6_108067948_-	intronic
ADediting_1222030	chr6_108067953_-	intronic
ADediting_1222031	chr6_108067964_-	intronic
ADediting_1222032	chr6_108067980_-	intronic
ADediting_1222033	chr6_108068004_-	intronic
ADediting_1222034	chr6_108068013_-	intronic
ADediting_1222035	chr6_108068084_-	intronic
ADediting_1222036	chr6_108068107_-	intronic
ADediting_1222037	chr6_108068116_-	intronic
ADediting_1222038	chr6_108068137_-	intronic
ADediting_1222039	chr6_108068142_-	intronic
ADediting_1222040	chr6_108068169_-	intronic
ADediting_1222041	chr6_108068172_-	intronic
ADediting_1222042	chr6_108068173_-	intronic
ADediting_1222043	chr6_108068174_-	intronic
ADediting_1222044	chr6_108068204_-	intronic
ADediting_1222045	chr6_108070067_-	intronic
ADediting_1222046	chr6_108070135_-	intronic
ADediting_1222047	chr6_108070143_-	intronic
ADediting_1222048	chr6_108070198_-	intronic
ADediting_1222049	chr6_108070218_-	intronic
ADediting_1222050	chr6_108070221_-	intronic
ADediting_1222051	chr6_108070234_-	intronic
ADediting_1222052	chr6_108070235_-	intronic
ADediting_1222053	chr6_108070242_-	intronic
ADediting_1222054	chr6_108070247_-	intronic
ADediting_1222055	chr6_108070673_-	intronic
ADediting_1222056	chr6_108070984_-	intronic
ADediting_1222057	chr6_108070995_-	intronic
ADediting_1222058	chr6_108070999_-	intronic
ADediting_1222059	chr6_108071007_-	intronic
ADediting_1222060	chr6_108071032_-	intronic
ADediting_1222061	chr6_108071112_-	intronic
ADediting_1222062	chr6_108071136_-	intronic
ADediting_1222063	chr6_108071182_-	intronic
ADediting_1222064	chr6_108071335_-	intronic
ADediting_1222065	chr6_108071360_-	intronic
ADediting_1222066	chr6_108071369_-	intronic
ADediting_1222067	chr6_108071373_-	intronic
ADediting_1222068	chr6_108071374_-	intronic
ADediting_1222069	chr6_108071402_-	intronic
ADediting_1222070	chr6_108071403_-	intronic
ADediting_1222071	chr6_108071411_-	intronic
ADediting_1222072	chr6_108071434_-	intronic
ADediting_1222073	chr6_108071458_-	intronic
ADediting_1222074	chr6_108071516_-	intronic
ADediting_1222075	chr6_108071517_-	intronic
ADediting_1222076	chr6_108071550_-	intronic
ADediting_1222077	chr6_108071585_-	intronic
ADediting_1222078	chr6_108071586_-	intronic
ADediting_1222079	chr6_108071608_-	intronic
ADediting_1222080	chr6_108072377_-	intronic
ADediting_1222081	chr6_108072399_-	intronic
ADediting_1222082	chr6_108072404_-	intronic
ADediting_1222083	chr6_108072412_-	intronic
ADediting_1222084	chr6_108072413_-	intronic
ADediting_1222085	chr6_108072416_-	intronic
ADediting_1222086	chr6_108072430_-	intronic
ADediting_1222087	chr6_108072442_-	intronic
ADediting_1222088	chr6_108072470_-	intronic
ADediting_1222089	chr6_108072481_-	intronic
ADediting_1222090	chr6_108072493_-	intronic
ADediting_1222091	chr6_108072521_-	intronic
ADediting_1222092	chr6_108072533_-	intronic
ADediting_1222093	chr6_108072550_-	intronic
ADediting_1222094	chr6_108072826_-	intronic
ADediting_1222095	chr6_108072841_-	intronic
ADediting_1222096	chr6_108072878_-	intronic
ADediting_1222097	chr6_108072886_-	intronic
ADediting_1222098	chr6_108072988_-	intronic
ADediting_1222099	chr6_108072991_-	intronic
ADediting_1222100	chr6_108073003_-	intronic
ADediting_1222101	chr6_108073047_-	intronic
ADediting_1222102	chr6_108073056_-	intronic
ADediting_1222103	chr6_108073077_-	intronic
ADediting_1222104	chr6_108073082_-	intronic
ADediting_1222105	chr6_108073083_-	intronic
ADediting_1582187	chr6_108042240_-	UTR3
ADediting_1582188	chr6_108042462_-	UTR3
ADediting_1582189	chr6_108042580_-	UTR3
ADediting_1658731	chr6_108068048_-	intronic
ADediting_1658732	chr6_108068049_-	intronic
ADediting_1658733	chr6_108068061_-	intronic
ADediting_1658734	chr6_108068105_-	intronic
ADediting_1658735	chr6_108072389_-	intronic
ADediting_1658736	chr6_108072417_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_1221904	chr6_108042166_-	SINE	Alu	Name=FLAM_C
ADediting_1221905	chr6_108042167_-	SINE	Alu	Name=FLAM_C
ADediting_1221906	chr6_108042169_-	SINE	Alu	Name=FLAM_C
ADediting_1221907	chr6_108042172_-	SINE	Alu	Name=FLAM_C
ADediting_1221908	chr6_108042173_-	SINE	Alu	Name=FLAM_C
ADediting_1221909	chr6_108042175_-	SINE	Alu	Name=FLAM_C
ADediting_1221910	chr6_108042187_-	SINE	Alu	Name=FLAM_C
ADediting_1221911	chr6_108042188_-	SINE	Alu	Name=FLAM_C
ADediting_1221912	chr6_108042189_-	SINE	Alu	Name=FLAM_C
ADediting_1221913	chr6_108042197_-	SINE	Alu	Name=FLAM_C
ADediting_1221914	chr6_108042210_-	SINE	Alu	Name=FLAM_C
ADediting_1221915	chr6_108042212_-	SINE	Alu	Name=FLAM_C
ADediting_1221916	chr6_108042214_-	SINE	Alu	Name=FLAM_C
ADediting_1221917	chr6_108042215_-	SINE	Alu	Name=FLAM_C
ADediting_1221918	chr6_108042220_-	SINE	Alu	Name=FLAM_C
ADediting_1221919	chr6_108042239_-	SINE	Alu	Name=FLAM_C
ADediting_1221920	chr6_108042249_-	SINE	Alu	Name=FLAM_C
ADediting_1221921	chr6_108042252_-	SINE	Alu	Name=FLAM_C
ADediting_1221922	chr6_108042260_-	SINE	Alu	Name=FLAM_C
ADediting_1221923	chr6_108042264_-	SINE	Alu	Name=FLAM_C
ADediting_1221924	chr6_108042266_-	SINE	Alu	Name=FLAM_C
ADediting_1221925	chr6_108042422_-	SINE	Alu	Name=AluJb
ADediting_1221926	chr6_108042537_-	SINE	Alu	Name=AluJb
ADediting_1221927	chr6_108042554_-	SINE	Alu	Name=AluJb
ADediting_1221928	chr6_108042563_-	SINE	Alu	Name=AluJb
ADediting_1221929	chr6_108042572_-	SINE	Alu	Name=AluJb
ADediting_1221930	chr6_108042595_-	SINE	Alu	Name=AluJb
ADediting_1221931	chr6_108042609_-	SINE	Alu	Name=AluJb
ADediting_1221932	chr6_108042610_-	SINE	Alu	Name=AluJb
ADediting_1221933	chr6_108042615_-	SINE	Alu	Name=AluJb
ADediting_1221934	chr6_108042617_-	SINE	Alu	Name=AluJb
ADediting_1221935	chr6_108042619_-	SINE	Alu	Name=AluJb
ADediting_1221936	chr6_108042632_-	SINE	Alu	Name=AluJb
ADediting_1221937	chr6_108042661_-	SINE	Alu	Name=AluJb
ADediting_1221938	chr6_108042685_-	SINE	Alu	Name=AluJb
ADediting_1221939	chr6_108042691_-	SINE	Alu	Name=AluJb
ADediting_1221940	chr6_108042693_-	SINE	Alu	Name=AluJb
ADediting_1221941	chr6_108052190_-	SINE	Alu	Name=AluY
ADediting_1221942	chr6_108052205_-	SINE	Alu	Name=AluY
ADediting_1221943	chr6_108052245_-	SINE	Alu	Name=AluY
ADediting_1221944	chr6_108052253_-	SINE	Alu	Name=AluY
ADediting_1221945	chr6_108052267_-	SINE	Alu	Name=AluY
ADediting_1221946	chr6_108052333_-	SINE	Alu	Name=AluY
ADediting_1221947	chr6_108052621_-	SINE	Alu	Name=FLAM_C
ADediting_1221948	chr6_108052622_-	SINE	Alu	Name=FLAM_C
ADediting_1221949	chr6_108053043_-	LTR	ERV1	Name=MER65D
ADediting_1221950	chr6_108053626_-	SINE	Alu	Name=AluSz
ADediting_1221951	chr6_108053630_-	SINE	Alu	Name=AluSz
ADediting_1221952	chr6_108053634_-	SINE	Alu	Name=AluSz
ADediting_1221953	chr6_108053635_-	SINE	Alu	Name=AluSz
ADediting_1221954	chr6_108053636_-	SINE	Alu	Name=AluSz
ADediting_1221955	chr6_108053639_-	SINE	Alu	Name=AluSz
ADediting_1221956	chr6_108053642_-	SINE	Alu	Name=AluSz
ADediting_1221957	chr6_108053643_-	SINE	Alu	Name=AluSz
ADediting_1221958	chr6_108053644_-	SINE	Alu	Name=AluSz
ADediting_1221959	chr6_108053645_-	SINE	Alu	Name=AluSz
ADediting_1221960	chr6_108053659_-	SINE	Alu	Name=AluSz
ADediting_1221961	chr6_108053661_-	SINE	Alu	Name=AluSz
ADediting_1221962	chr6_108053670_-	SINE	Alu	Name=AluSz
ADediting_1221963	chr6_108053678_-	SINE	Alu	Name=AluSz
ADediting_1221964	chr6_108053693_-	SINE	Alu	Name=AluSz
ADediting_1221965	chr6_108053708_-	SINE	Alu	Name=AluSz
ADediting_1221966	chr6_108053712_-	SINE	Alu	Name=AluSz
ADediting_1221967	chr6_108053717_-	SINE	Alu	Name=AluSz
ADediting_1221968	chr6_108053741_-	SINE	Alu	Name=AluSz
ADediting_1221969	chr6_108056968_-	SINE	Alu	Name=AluJb
ADediting_1221970	chr6_108056969_-	SINE	Alu	Name=AluJb
ADediting_1221971	chr6_108056990_-	SINE	Alu	Name=AluJb
ADediting_1221972	chr6_108056992_-	SINE	Alu	Name=AluJb
ADediting_1221973	chr6_108057037_-	SINE	Alu	Name=AluJb
ADediting_1221974	chr6_108057106_-	SINE	Alu	Name=AluJb
ADediting_1221975	chr6_108057177_-	SINE	Alu	Name=AluJb
ADediting_1221976	chr6_108057195_-	SINE	Alu	Name=AluJb
ADediting_1221977	chr6_108057215_-	SINE	Alu	Name=AluJb
ADediting_1221978	chr6_108060473_-	SINE	Alu	Name=AluJb
ADediting_1221979	chr6_108060475_-	SINE	Alu	Name=AluJb
ADediting_1221980	chr6_108060507_-	SINE	Alu	Name=AluJb
ADediting_1221981	chr6_108060526_-	SINE	Alu	Name=AluJb
ADediting_1221982	chr6_108060593_-	SINE	Alu	Name=AluJb
ADediting_1221983	chr6_108060608_-	SINE	Alu	Name=AluJb
ADediting_1221984	chr6_108060617_-	SINE	Alu	Name=AluJb
ADediting_1221985	chr6_108060623_-	SINE	Alu	Name=AluJb
ADediting_1221986	chr6_108060634_-	SINE	Alu	Name=AluJb
ADediting_1221987	chr6_108060657_-	SINE	Alu	Name=AluJb
ADediting_1221988	chr6_108060672_-	SINE	Alu	Name=AluJb
ADediting_1221989	chr6_108060683_-	SINE	Alu	Name=AluJb
ADediting_1221990	chr6_108061568_-	SINE	Alu	Name=AluJo
ADediting_1221991	chr6_108061594_-	SINE	Alu	Name=AluJo
ADediting_1221992	chr6_108061604_-	SINE	Alu	Name=AluJo
ADediting_1221993	chr6_108061618_-	SINE	Alu	Name=AluJo
ADediting_1221994	chr6_108061636_-	SINE	Alu	Name=AluJo
ADediting_1221995	chr6_108061664_-	SINE	Alu	Name=AluJo
ADediting_1221996	chr6_108061666_-	SINE	Alu	Name=AluJo
ADediting_1221997	chr6_108061690_-	SINE	Alu	Name=AluJo
ADediting_1221998	chr6_108061761_-	SINE	Alu	Name=AluJo
ADediting_1221999	chr6_108061770_-	SINE	Alu	Name=AluJo
ADediting_1222000	chr6_108061775_-	SINE	Alu	Name=AluJo
ADediting_1222001	chr6_108061802_-	SINE	Alu	Name=AluJo
ADediting_1222002	chr6_108061824_-	SINE	Alu	Name=AluJo
ADediting_1222003	chr6_108062580_-	SINE	Alu	Name=AluJb
ADediting_1222004	chr6_108062658_-	SINE	Alu	Name=AluJb
ADediting_1222005	chr6_108062667_-	SINE	Alu	Name=AluJb
ADediting_1222006	chr6_108062677_-	SINE	Alu	Name=AluJb
ADediting_1222007	chr6_108062693_-	SINE	Alu	Name=AluJb
ADediting_1222008	chr6_108062701_-	SINE	Alu	Name=AluJb
ADediting_1222009	chr6_108062723_-	SINE	Alu	Name=AluJb
ADediting_1222010	chr6_108062736_-	SINE	Alu	Name=AluJb
ADediting_1222011	chr6_108062747_-	SINE	Alu	Name=AluJb
ADediting_1222012	chr6_108062801_-	SINE	Alu	Name=AluJb
ADediting_1222013	chr6_108062807_-	SINE	Alu	Name=AluJb
ADediting_1222014	chr6_108062809_-	SINE	Alu	Name=AluJb
ADediting_1222015	chr6_108063219_-	SINE	Alu	Name=AluJo
ADediting_1222016	chr6_108066474_-	LINE	L2	Name=L2
ADediting_1222017	chr6_108066548_-	LINE	L2	Name=L2
ADediting_1222018	chr6_108066572_-	LINE	L2	Name=L2
ADediting_1222019	chr6_108066587_-	LINE	L2	Name=L2
ADediting_1222020	chr6_108066599_-	LINE	L2	Name=L2
ADediting_1222021	chr6_108066612_-	LINE	L2	Name=L2
ADediting_1222022	chr6_108066625_-	LINE	L2	Name=L2
ADediting_1222023	chr6_108066632_-	LINE	L2	Name=L2
ADediting_1222024	chr6_108066713_-	LINE	L2	Name=L2
ADediting_1222025	chr6_108066749_-	LINE	L2	Name=L2
ADediting_1222026	chr6_108067915_-	LINE	L2	Name=L2c
ADediting_1222027	chr6_108067916_-	LINE	L2	Name=L2c
ADediting_1222028	chr6_108067940_-	LINE	L2	Name=L2c
ADediting_1222029	chr6_108067948_-	LINE	L2	Name=L2c
ADediting_1222030	chr6_108067953_-	LINE	L2	Name=L2c
ADediting_1222031	chr6_108067964_-	LINE	L2	Name=L2c
ADediting_1222032	chr6_108067980_-	LINE	L2	Name=L2c
ADediting_1222033	chr6_108068004_-	LINE	L2	Name=L2c
ADediting_1222034	chr6_108068013_-	LINE	L2	Name=L2c
ADediting_1222035	chr6_108068084_-	LINE	L2	Name=L2c
ADediting_1222036	chr6_108068107_-	LINE	L2	Name=L2c
ADediting_1222037	chr6_108068116_-	LINE	L2	Name=L2c
ADediting_1222038	chr6_108068137_-	LINE	L2	Name=L2c
ADediting_1222039	chr6_108068142_-	LINE	L2	Name=L2c
ADediting_1222040	chr6_108068169_-	LINE	L2	Name=L2c
ADediting_1222041	chr6_108068172_-	LINE	L2	Name=L2c
ADediting_1222042	chr6_108068173_-	LINE	L2	Name=L2c
ADediting_1222043	chr6_108068174_-	LINE	L2	Name=L2c
ADediting_1222044	chr6_108068204_-	LINE	L2	Name=L2c
ADediting_1222045	chr6_108070067_-	SINE	Alu	Name=AluSz6
ADediting_1222046	chr6_108070135_-	SINE	Alu	Name=AluSz6
ADediting_1222047	chr6_108070143_-	SINE	Alu	Name=AluSz6
ADediting_1222048	chr6_108070198_-	SINE	Alu	Name=AluSz6
ADediting_1222049	chr6_108070218_-	SINE	Alu	Name=AluSz6
ADediting_1222050	chr6_108070221_-	SINE	Alu	Name=AluSz6
ADediting_1222051	chr6_108070234_-	SINE	Alu	Name=AluSz6
ADediting_1222052	chr6_108070235_-	SINE	Alu	Name=AluSz6
ADediting_1222053	chr6_108070242_-	SINE	Alu	Name=AluSz6
ADediting_1222054	chr6_108070247_-	SINE	Alu	Name=AluSz6
ADediting_1222055	chr6_108070673_-	SINE	Alu	Name=AluSq2
ADediting_1222056	chr6_108070984_-	SINE	Alu	Name=AluYj4
ADediting_1222057	chr6_108070995_-	SINE	Alu	Name=AluYj4
ADediting_1222058	chr6_108070999_-	SINE	Alu	Name=AluYj4
ADediting_1222059	chr6_108071007_-	SINE	Alu	Name=AluYj4
ADediting_1222060	chr6_108071032_-	SINE	Alu	Name=AluYj4
ADediting_1222061	chr6_108071112_-	SINE	Alu	Name=AluYj4
ADediting_1222062	chr6_108071136_-	SINE	Alu	Name=AluYj4
ADediting_1222063	chr6_108071182_-	SINE	Alu	Name=AluYj4
ADediting_1222064	chr6_108071335_-	SINE	Alu	Name=AluSx
ADediting_1222065	chr6_108071360_-	SINE	Alu	Name=AluSx
ADediting_1222066	chr6_108071369_-	SINE	Alu	Name=AluSx
ADediting_1222067	chr6_108071373_-	SINE	Alu	Name=AluSx
ADediting_1222068	chr6_108071374_-	SINE	Alu	Name=AluSx
ADediting_1222069	chr6_108071402_-	SINE	Alu	Name=AluSx
ADediting_1222070	chr6_108071403_-	SINE	Alu	Name=AluSx
ADediting_1222071	chr6_108071411_-	SINE	Alu	Name=AluSx
ADediting_1222072	chr6_108071434_-	SINE	Alu	Name=AluSx
ADediting_1222073	chr6_108071458_-	SINE	Alu	Name=AluSx
ADediting_1222074	chr6_108071516_-	SINE	Alu	Name=AluSx
ADediting_1222075	chr6_108071517_-	SINE	Alu	Name=AluSx
ADediting_1222076	chr6_108071550_-	SINE	Alu	Name=AluSx
ADediting_1222077	chr6_108071585_-	SINE	Alu	Name=AluSx
ADediting_1222078	chr6_108071586_-	SINE	Alu	Name=AluSx
ADediting_1222079	chr6_108071608_-	SINE	Alu	Name=AluSx
ADediting_1222080	chr6_108072377_-	SINE	Alu	Name=AluSz
ADediting_1222081	chr6_108072399_-	SINE	Alu	Name=AluSz
ADediting_1222082	chr6_108072404_-	SINE	Alu	Name=AluSz
ADediting_1222083	chr6_108072412_-	SINE	Alu	Name=AluSz
ADediting_1222084	chr6_108072413_-	SINE	Alu	Name=AluSz
ADediting_1222085	chr6_108072416_-	SINE	Alu	Name=AluSz
ADediting_1222086	chr6_108072430_-	SINE	Alu	Name=AluSz
ADediting_1222087	chr6_108072442_-	SINE	Alu	Name=AluSz
ADediting_1222088	chr6_108072470_-	SINE	Alu	Name=AluSz
ADediting_1222089	chr6_108072481_-	SINE	Alu	Name=AluSz
ADediting_1222090	chr6_108072493_-	SINE	Alu	Name=AluSz
ADediting_1222091	chr6_108072521_-	SINE	Alu	Name=AluSz
ADediting_1222092	chr6_108072533_-	SINE	Alu	Name=AluSz
ADediting_1222093	chr6_108072550_-	SINE	Alu	Name=AluSz
ADediting_1222094	chr6_108072826_-	SINE	Alu	Name=AluSc8
ADediting_1222095	chr6_108072841_-	SINE	Alu	Name=AluSc8
ADediting_1222096	chr6_108072878_-	SINE	Alu	Name=AluSc8
ADediting_1222097	chr6_108072886_-	SINE	Alu	Name=AluSc8
ADediting_1222098	chr6_108072988_-	SINE	Alu	Name=AluSx
ADediting_1222099	chr6_108072991_-	SINE	Alu	Name=AluSx
ADediting_1222100	chr6_108073003_-	SINE	Alu	Name=AluSx
ADediting_1222101	chr6_108073047_-	SINE	Alu	Name=AluSx
ADediting_1222102	chr6_108073056_-	SINE	Alu	Name=AluSx
ADediting_1222103	chr6_108073077_-	SINE	Alu	Name=AluSx
ADediting_1222104	chr6_108073082_-	SINE	Alu	Name=AluSx
ADediting_1222105	chr6_108073083_-	SINE	Alu	Name=AluSx
ADediting_1582187	chr6_108042240_-	SINE	Alu	Name=FLAM_C
ADediting_1582188	chr6_108042462_-	SINE	Alu	Name=AluJb
ADediting_1582189	chr6_108042580_-	SINE	Alu	Name=AluJb
ADediting_1658731	chr6_108068048_-	LINE	L2	Name=L2c
ADediting_1658732	chr6_108068049_-	LINE	L2	Name=L2c
ADediting_1658733	chr6_108068061_-	LINE	L2	Name=L2c
ADediting_1658734	chr6_108068105_-	LINE	L2	Name=L2c
ADediting_1658735	chr6_108072389_-	SINE	Alu	Name=AluSz
ADediting_1658736	chr6_108072417_-	SINE	Alu	Name=AluSz

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RNA A-to-I editing events in the alternative splicing sites for OSTM1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for OSTM1

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

Top

Protein coding region RNA A-to-I editings for OSTM1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for OSTM1

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1221905	chr6_108042167_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6847-3p	chr6	108042163	108042170	8mer-1a	108042163	108042185	153	-17.94
ADediting_1221907	chr6_108042172_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4633-5p	chr6	108042166	108042173	8mer-1a	108042166	108042183	151	-15.91
ADediting_1221907	chr6_108042172_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6514-3p	chr6	108042169	108042175	7mer-m8	108042168	108042188	155	-17.54
ADediting_1221909	chr6_108042175_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-106a-3p	chr6	108042172	108042178	7mer-1a	108042172	108042193	141	-16.54
ADediting_1221909	chr6_108042175_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4327	chr6	108042169	108042176	8mer-1a	108042169	108042187	140	-13.39
ADediting_1221910	chr6_108042187_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3189-3p	chr6	108042186	108042192	7mer-m8	108042185	108042204	145	-23.12
ADediting_1221910	chr6_108042187_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6813-3p	chr6	108042185	108042191	7mer-m8	108042184	108042204	140	-11.59
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-326	chr6	108042186	108042192	7mer-m8	108042185	108042204	140	-14.66
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-330-5p	chr6	108042186	108042192	7mer-m8	108042185	108042206	140	-20.71
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4314	chr6	108042187	108042193	7mer-m8	108042186	108042203	140	-18.91
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-514a-5p	chr6	108042185	108042191	7mer-m8	108042184	108042207	146	-18.62
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6771-5p	chr6	108042187	108042194	8mer-1a	108042187	108042206	156	-27.37
ADediting_1221914	chr6_108042210_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4751	chr6	108042205	108042211	7mer-m8	108042204	108042229	145	-19.71
ADediting_1221914	chr6_108042210_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6821-3p	chr6	108042208	108042214	7mer-m8	108042207	108042228	145	-14.37
ADediting_1221914	chr6_108042210_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6861-3p	chr6	108042207	108042213	7mer-m8	108042206	108042223	145	-16.65
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-188-5p	chr6	108042209	108042215	7mer-m8	108042208	108042228	159	-20.62
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4780	chr6	108042210	108042217	8mer-1a	108042210	108042231	146	-15.44
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-623	chr6	108042210	108042216	7mer-m8	108042209	108042235	147	-23.72
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6866-3p	chr6	108042209	108042215	7mer-m8	108042208	108042229	149	-16.34
ADediting_1221916	chr6_108042214_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-12113	chr6	108042214	108042220	7mer-m8	108042213	108042234	145	-17.69
ADediting_1221916	chr6_108042214_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4539	chr6	108042214	108042220	7mer-m8	108042213	108042232	147	-15.09
ADediting_1221918	chr6_108042220_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-665	chr6	108042220	108042226	7mer-m8	108042219	108042238	157	-22.6
ADediting_1221918	chr6_108042220_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6840-3p	chr6	108042219	108042225	7mer-m8	108042218	108042239	151	-19.22
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3187-5p	chr6	108042239	108042245	7mer-m8	108042238	108042261	159	-30.39
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-5189-5p	chr6	108042239	108042245	7mer-m8	108042238	108042260	152	-22.49
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-612	chr6	108042239	108042245	7mer-m8	108042238	108042261	149	-19.72
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-661	chr6	108042237	108042243	7mer-m8	108042236	108042260	142	-20.59
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6849-3p	chr6	108042234	108042240	7mer-m8	108042233	108042253	152	-18.22
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6860	chr6	108042239	108042245	7mer-m8	108042238	108042256	152	-24.98
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-939-3p	chr6	108042238	108042244	7mer-m8	108042237	108042257	140	-15.63
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-128-3p	chr6	108042247	108042253	7mer-m8	108042246	108042268	169	-23.98
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-216a-3p	chr6	108042247	108042253	7mer-m8	108042246	108042268	150	-20.14
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3681-3p	chr6	108042247	108042253	7mer-m8	108042246	108042267	143	-15.54
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-340-3p	chr6	108042259	108042265	7mer-m8	108042258	108042279	141	-14.72
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6827-3p	chr6	108042259	108042265	7mer-m8	108042258	108042278	147	-18.07
ADediting_1221926	chr6_108042537_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3943	chr6	108042533	108042539	7mer-m8	108042532	108042553	145	-22.14
ADediting_1221927	chr6_108042554_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-140-3p	chr6	108042552	108042558	7mer-m8	108042551	108042571	155	-22.38
ADediting_1221929	chr6_108042572_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-500b-3p	chr6	108042572	108042578	7mer-m8	108042571	108042590	145	-14.86
ADediting_1221930	chr6_108042595_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3158-5p	chr6	108042594	108042601	8mer-1a	108042594	108042614	150	-16.81
ADediting_1221930	chr6_108042595_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-544a	chr6	108042592	108042599	8mer-1a	108042592	108042613	140	-11.14
ADediting_1221931	chr6_108042609_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3977	chr6	108042607	108042613	7mer-m8	108042606	108042627	146	-12.97
ADediting_1221931	chr6_108042609_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-520f-3p	chr6	108042605	108042611	7mer-m8	108042604	108042625	150	-13.29
ADediting_1221931	chr6_108042609_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6837-3p	chr6	108042609	108042615	7mer-m8	108042608	108042633	154	-20.32
ADediting_1221933	chr6_108042615_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4716-5p	chr6	108042614	108042620	7mer-m8	108042613	108042635	146	-14.19
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3176	chr6	108042628	108042634	7mer-m8	108042627	108042645	158	-22.23
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3922-3p	chr6	108042628	108042634	7mer-m8	108042627	108042652	157	-23.28
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6878-3p	chr6	108042629	108042635	7mer-m8	108042628	108042648	140	-20.04
ADediting_1221937	chr6_108042661_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-5001-3p	chr6	108042656	108042662	7mer-m8	108042655	108042680	154	-22.37
ADediting_1221938	chr6_108042685_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6768-5p	chr6	108042684	108042690	7mer-m8	108042683	108042705	142	-20.28
ADediting_1582188	chr6_108042462_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3652	chr6	108042460	108042466	7mer-m8	108042459	108042478	144	-18.33
ADediting_1582188	chr6_108042462_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4430	chr6	108042460	108042466	7mer-m8	108042459	108042477	159	-26.4
ADediting_1582188	chr6_108042462_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6128	chr6	108042462	108042468	7mer-m8	108042461	108042478	148	-13.28

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-887-5p	chr6	108042187	108042194	8mer-1a	108042187	108042207	142	-13.51
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-30b-3p	chr6	108042188	108042195	8mer-1a	108042188	108042209	147	-15.37
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3689a-3p	chr6	108042188	108042195	8mer-1a	108042188	108042208	143	-16.25
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3689b-3p	chr6	108042188	108042195	8mer-1a	108042188	108042208	143	-15.66
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3689c	chr6	108042188	108042195	8mer-1a	108042188	108042208	143	-15.66
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6779-5p	chr6	108042188	108042195	8mer-1a	108042188	108042206	144	-20.63
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-887-5p	chr6	108042187	108042194	8mer-1a	108042187	108042207	142	-13.51
ADediting_1221918	chr6_108042220_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-510-5p	chr6	108042218	108042224	7mer-m8	108042217	108042238	150	-19.76
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4453	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-15.28
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4538	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-14.25
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-921	chr6	108042249	108042255	7mer-m8	108042248	108042272	150	-14.04
ADediting_1221921	chr6_108042252_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-921	chr6	108042249	108042255	7mer-m8	108042248	108042272	150	-14.04
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6760-3p	chr6	108042257	108042263	7mer-m8	108042256	108042276	142	-12.74
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6818-3p	chr6	108042260	108042266	7mer-m8	108042259	108042280	140	-11.1
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4684-5p	chr6	108042262	108042268	7mer-m8	108042261	108042282	144	-8.1
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-519a-2-5p	chr6	108042262	108042269	8mer-1a	108042262	108042282	154	-14.62
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-520b-5p	chr6	108042262	108042269	8mer-1a	108042262	108042282	154	-14.62
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6818-3p	chr6	108042260	108042266	7mer-m8	108042259	108042280	140	-11.1
ADediting_1221924	chr6_108042266_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4684-5p	chr6	108042262	108042268	7mer-m8	108042261	108042282	144	-8.1
ADediting_1221924	chr6_108042266_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-519a-2-5p	chr6	108042262	108042269	8mer-1a	108042262	108042282	154	-14.62
ADediting_1221924	chr6_108042266_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-520b-5p	chr6	108042262	108042269	8mer-1a	108042262	108042282	154	-14.62
ADediting_1221926	chr6_108042537_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-150-5p	chr6	108042536	108042542	7mer-m8	108042535	108042558	142	-15.65
ADediting_1221926	chr6_108042537_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6778-3p	chr6	108042534	108042540	7mer-m8	108042533	108042553	140	-14.56
ADediting_1221927	chr6_108042554_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4759	chr6	108042548	108042555	8mer-1a	108042548	108042568	145	-13.2
ADediting_1221927	chr6_108042554_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-7151-3p	chr6	108042554	108042560	7mer-m8	108042553	108042573	140	-14.57
ADediting_1221928	chr6_108042563_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-9898	chr6	108042561	108042567	7mer-m8	108042560	108042578	152	-21
ADediting_1221930	chr6_108042595_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-129-5p	chr6	108042591	108042598	8mer-1a	108042591	108042611	146	-11.6
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3663-5p	chr6	108042628	108042634	7mer-m8	108042627	108042646	141	-23.84
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6131	chr6	108042627	108042633	7mer-m8	108042626	108042644	140	-18.36
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6843-3p	chr6	108042629	108042635	7mer-m8	108042628	108042648	146	-16.38
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-6848-3p	chr6	108042629	108042635	7mer-m8	108042628	108042646	140	-11.86
ADediting_1221937	chr6_108042661_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-3977	chr6	108042658	108042664	7mer-m8	108042657	108042679	146	-9.83
ADediting_1582187	chr6_108042240_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4453	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-15.28
ADediting_1582187	chr6_108042240_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4538	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-14.25
ADediting_1582189	chr6_108042580_-	ENSG00000081087.15	ENST00000193322.8	OSTM1-201	hsa-miR-4735-5p	chr6	108042579	108042585	7mer-m8	108042578	108042599	140	-4.28

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1221905	chr6_108042167_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6847-3p	chr6	108042163	108042170	8mer-1a	108042163	108042185	153	-17.94
ADediting_1221907	chr6_108042172_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4633-5p	chr6	108042166	108042173	8mer-1a	108042166	108042183	151	-15.91
ADediting_1221907	chr6_108042172_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6514-3p	chr6	108042169	108042175	7mer-m8	108042168	108042188	155	-17.54
ADediting_1221909	chr6_108042175_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-106a-3p	chr6	108042172	108042178	7mer-1a	108042172	108042193	141	-16.54
ADediting_1221909	chr6_108042175_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4327	chr6	108042169	108042176	8mer-1a	108042169	108042187	140	-13.39
ADediting_1221910	chr6_108042187_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3189-3p	chr6	108042186	108042192	7mer-m8	108042185	108042204	145	-23.12
ADediting_1221910	chr6_108042187_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6813-3p	chr6	108042185	108042191	7mer-m8	108042184	108042204	140	-11.59
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-326	chr6	108042186	108042192	7mer-m8	108042185	108042204	140	-14.66
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-330-5p	chr6	108042186	108042192	7mer-m8	108042185	108042206	140	-20.71
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4314	chr6	108042187	108042193	7mer-m8	108042186	108042203	140	-18.91
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-514a-5p	chr6	108042185	108042191	7mer-m8	108042184	108042207	146	-18.62
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6771-5p	chr6	108042187	108042194	8mer-1a	108042187	108042206	156	-27.37
ADediting_1221914	chr6_108042210_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4751	chr6	108042205	108042211	7mer-m8	108042204	108042229	145	-19.71
ADediting_1221914	chr6_108042210_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6821-3p	chr6	108042208	108042214	7mer-m8	108042207	108042228	145	-14.37
ADediting_1221914	chr6_108042210_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6861-3p	chr6	108042207	108042213	7mer-m8	108042206	108042223	145	-16.65
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-188-5p	chr6	108042209	108042215	7mer-m8	108042208	108042228	159	-20.62
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4780	chr6	108042210	108042217	8mer-1a	108042210	108042231	146	-15.44
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-623	chr6	108042210	108042216	7mer-m8	108042209	108042235	147	-23.72
ADediting_1221915	chr6_108042212_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6866-3p	chr6	108042209	108042215	7mer-m8	108042208	108042229	149	-16.34
ADediting_1221916	chr6_108042214_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-12113	chr6	108042214	108042220	7mer-m8	108042213	108042234	145	-17.69
ADediting_1221916	chr6_108042214_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4539	chr6	108042214	108042220	7mer-m8	108042213	108042232	147	-15.09
ADediting_1221918	chr6_108042220_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-665	chr6	108042220	108042226	7mer-m8	108042219	108042238	157	-22.6
ADediting_1221918	chr6_108042220_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6840-3p	chr6	108042219	108042225	7mer-m8	108042218	108042239	151	-19.22
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3187-5p	chr6	108042239	108042245	7mer-m8	108042238	108042261	159	-30.39
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-5189-5p	chr6	108042239	108042245	7mer-m8	108042238	108042260	152	-22.49
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-612	chr6	108042239	108042245	7mer-m8	108042238	108042261	149	-19.72
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-661	chr6	108042237	108042243	7mer-m8	108042236	108042260	142	-20.59
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6849-3p	chr6	108042234	108042240	7mer-m8	108042233	108042253	152	-18.22
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6860	chr6	108042239	108042245	7mer-m8	108042238	108042256	152	-24.98
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-939-3p	chr6	108042238	108042244	7mer-m8	108042237	108042257	140	-15.63
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-128-3p	chr6	108042247	108042253	7mer-m8	108042246	108042570	164	-21.81
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-216a-3p	chr6	108042247	108042253	7mer-m8	108042246	108042570	150	-19.55
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3681-3p	chr6	108042247	108042253	7mer-m8	108042246	108042573	146	-19.14
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-340-3p	chr6	108042259	108042567	7mer-m8	108042258	108042582	151	-22.28
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6827-3p	chr6	108042259	108042567	7mer-m8	108042258	108042579	152	-27.21
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-1260a	chr6	108042262	108042570	7mer-m8	108042261	108042579	144	-18.34
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-1260b	chr6	108042262	108042570	7mer-m8	108042261	108042581	153	-20.35
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4433a-5p	chr6	108042260	108042569	8mer-1a	108042260	108042585	150	-23.18
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4433b-5p	chr6	108042260	108042568	7mer-m8	108042259	108042585	154	-24.37
ADediting_1221929	chr6_108042572_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-500b-3p	chr6	108042572	108042578	7mer-m8	108042571	108042590	145	-14.86
ADediting_1221930	chr6_108042595_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3158-5p	chr6	108042594	108042601	8mer-1a	108042594	108042614	150	-16.81
ADediting_1221930	chr6_108042595_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-544a	chr6	108042592	108042599	8mer-1a	108042592	108042613	140	-11.14
ADediting_1221931	chr6_108042609_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3977	chr6	108042607	108042613	7mer-m8	108042606	108042627	146	-12.97
ADediting_1221931	chr6_108042609_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-520f-3p	chr6	108042605	108042611	7mer-m8	108042604	108042625	150	-13.29
ADediting_1221931	chr6_108042609_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6837-3p	chr6	108042609	108042615	7mer-m8	108042608	108042633	154	-20.32
ADediting_1221933	chr6_108042615_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4716-5p	chr6	108042614	108042620	7mer-m8	108042613	108042635	146	-14.19
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3176	chr6	108042628	108042634	7mer-m8	108042627	108042645	158	-22.23
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3922-3p	chr6	108042628	108042634	7mer-m8	108042627	108042652	157	-23.28
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6878-3p	chr6	108042629	108042635	7mer-m8	108042628	108042648	140	-20.04
ADediting_1221937	chr6_108042661_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-5001-3p	chr6	108042656	108042662	7mer-m8	108042655	108042680	154	-22.37
ADediting_1221938	chr6_108042685_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6768-5p	chr6	108042684	108042690	7mer-m8	108042683	108042705	142	-20.28

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1221911	chr6_108042188_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-887-5p	chr6	108042187	108042194	8mer-1a	108042187	108042207	142	-13.51
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-30b-3p	chr6	108042188	108042195	8mer-1a	108042188	108042209	147	-15.37
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3689a-3p	chr6	108042188	108042195	8mer-1a	108042188	108042208	143	-16.25
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3689b-3p	chr6	108042188	108042195	8mer-1a	108042188	108042208	143	-15.66
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3689c	chr6	108042188	108042195	8mer-1a	108042188	108042208	143	-15.66
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6779-5p	chr6	108042188	108042195	8mer-1a	108042188	108042206	144	-20.63
ADediting_1221912	chr6_108042189_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-887-5p	chr6	108042187	108042194	8mer-1a	108042187	108042207	142	-13.51
ADediting_1221918	chr6_108042220_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-510-5p	chr6	108042218	108042224	7mer-m8	108042217	108042238	150	-19.76
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4453	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-15.28
ADediting_1221919	chr6_108042239_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4538	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-14.25
ADediting_1221920	chr6_108042249_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-921	chr6	108042249	108042255	7mer-m8	108042248	108042574	155	-17.99
ADediting_1221921	chr6_108042252_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-921	chr6	108042249	108042255	7mer-m8	108042248	108042574	155	-17.99
ADediting_1221922	chr6_108042260_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6760-3p	chr6	108042257	108042263	7mer-m8	108042256	108042578	155	-24.09
ADediting_1221923	chr6_108042264_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6511b-3p	chr6	108042262	108042571	8mer-1a	108042262	108042587	148	-18.78
ADediting_1221930	chr6_108042595_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-129-5p	chr6	108042591	108042598	8mer-1a	108042591	108042611	146	-11.6
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3663-5p	chr6	108042628	108042634	7mer-m8	108042627	108042646	141	-23.84
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6131	chr6	108042627	108042633	7mer-m8	108042626	108042644	140	-18.36
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6843-3p	chr6	108042629	108042635	7mer-m8	108042628	108042648	146	-16.38
ADediting_1221936	chr6_108042632_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-6848-3p	chr6	108042629	108042635	7mer-m8	108042628	108042646	140	-11.86
ADediting_1221937	chr6_108042661_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-3977	chr6	108042658	108042664	7mer-m8	108042657	108042679	146	-9.83
ADediting_1582187	chr6_108042240_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4453	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-15.28
ADediting_1582187	chr6_108042240_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4538	chr6	108042236	108042242	7mer-m8	108042235	108042256	149	-14.25
ADediting_1582189	chr6_108042580_-	ENSG00000081087.15	ENST00000492130.1	OSTM1-207	hsa-miR-4735-5p	chr6	108042579	108042585	7mer-m8	108042578	108042599	140	-4.28

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1535954

chr14_101045974_+

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-381-3p

chr6

108042684

108042690

7mer-m8

108042683

108042705

147

-15.86

ADediting_1596844

chr1_162342605_+

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-556-3p

chr6

108044064

108044070

7mer-m8

108044063

108044084

145

-10.23

ADediting_286380

chr11_79422188_-

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-5579-3p

chr6

108044207

108044213

7mer-m8

108044206

108044227

140

-9.13

ADediting_291761

chr11_93733708_-

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-1304-3p

chr6

108043857

108043863

7mer-m8

108043856

108043876

157

-19.57

ADediting_843620

chr2_207754818_+

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-4775

chr6

108044094

108044100

7mer-m8

108044093

108044114

150

-4.55

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_107020

chr1_37500952_-

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-5581-3p

chr6

108041779

108041785

7mer-m8

108041778

108041801

142

-15.85

ADediting_1556067

chr19_40282625_-

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-641

chr6

108042515

108042521

7mer-m8

108042514

108042537

140

-12.79

ADediting_1631458

chr19_40282624_-

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-641

chr6

108042515

108042521

7mer-m8

108042514

108042537

140

-12.79

ADediting_843620

chr2_207754818_+

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-4775

chr6

108041900

108041906

7mer-m8

108041899

108041922

153

-4.97

ADediting_843620

chr2_207754818_+

ENSG00000081087.15

ENST00000193322.8

OSTM1-201

hsa-miR-4775

chr6

108044409

108044416

8mer-1a

108044409

108044431

149

-6.2

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for OSTM1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000492130.1	lncRNA
ENST00000193322.8	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1221904	ENST00000193322.8	chr6_108042166_-	3714	-1253.57	-1250.77	-1280.77
ADediting_1221905	ENST00000193322.8	chr6_108042167_-	3713	-1256.17	-1250.77	-1280.77
ADediting_1221906	ENST00000193322.8	chr6_108042169_-	3711	-1251.17	-1250.77	-1280.77
ADediting_1221907	ENST00000193322.8	chr6_108042172_-	3708	-1256.37	-1250.77	-1280.77
ADediting_1221908	ENST00000193322.8	chr6_108042173_-	3707	-1250.20	-1250.77	-1280.77
ADediting_1221909	ENST00000193322.8	chr6_108042175_-	3705	-1250.97	-1250.77	-1280.77
ADediting_1221910	ENST00000193322.8	chr6_108042187_-	3693	-1250.47	-1250.77	-1280.77
ADediting_1221911	ENST00000193322.8	chr6_108042188_-	3692	-1250.87	-1250.77	-1280.77
ADediting_1221912	ENST00000193322.8	chr6_108042189_-	3691	-1250.47	-1250.77	-1280.77
ADediting_1221913	ENST00000193322.8	chr6_108042197_-	3683	-1249.47	-1250.77	-1280.77
ADediting_1221914	ENST00000193322.8	chr6_108042210_-	3670	-1250.17	-1250.77	-1280.77
ADediting_1221915	ENST00000193322.8	chr6_108042212_-	3668	-1252.87	-1250.77	-1280.77
ADediting_1221916	ENST00000193322.8	chr6_108042214_-	3666	-1250.77	-1250.77	-1280.77
ADediting_1221917	ENST00000193322.8	chr6_108042215_-	3665	-1253.37	-1250.77	-1280.77
ADediting_1221918	ENST00000193322.8	chr6_108042220_-	3660	-1249.97	-1250.77	-1280.77
ADediting_1221919	ENST00000193322.8	chr6_108042239_-	3641	-1257.37	-1250.77	-1280.77
ADediting_1582187	ENST00000193322.8	chr6_108042240_-	3640	-1250.07	-1250.77	-1280.77
ADediting_1221920	ENST00000193322.8	chr6_108042249_-	3631	-1250.77	-1250.77	-1280.77
ADediting_1221921	ENST00000193322.8	chr6_108042252_-	3628	-1250.37	-1250.77	-1280.77
ADediting_1221922	ENST00000193322.8	chr6_108042260_-	3620	-1250.07	-1250.77	-1280.77
ADediting_1221923	ENST00000193322.8	chr6_108042264_-	3616	-1249.87	-1250.77	-1280.77
ADediting_1221924	ENST00000193322.8	chr6_108042266_-	3614	-1249.47	-1250.77	-1280.77
ADediting_1221925	ENST00000193322.8	chr6_108042422_-	3458	-1250.87	-1250.77	-1280.77
ADediting_1582188	ENST00000193322.8	chr6_108042462_-	3418	-1251.17	-1250.77	-1280.77
ADediting_1221926	ENST00000193322.8	chr6_108042537_-	3343	-1250.77	-1250.77	-1280.77
ADediting_1221927	ENST00000193322.8	chr6_108042554_-	3326	-1249.67	-1250.77	-1280.77
ADediting_1221928	ENST00000193322.8	chr6_108042563_-	3317	-1250.77	-1250.77	-1280.77
ADediting_1221929	ENST00000193322.8	chr6_108042572_-	3308	-1249.97	-1250.77	-1280.77
ADediting_1582189	ENST00000193322.8	chr6_108042580_-	3300	-1250.47	-1250.77	-1280.77
ADediting_1221930	ENST00000193322.8	chr6_108042595_-	3285	-1250.87	-1250.77	-1280.77
ADediting_1221931	ENST00000193322.8	chr6_108042609_-	3271	-1251.07	-1250.77	-1280.77
ADediting_1221932	ENST00000193322.8	chr6_108042610_-	3270	-1257.17	-1250.77	-1280.77
ADediting_1221933	ENST00000193322.8	chr6_108042615_-	3265	-1250.47	-1250.77	-1280.77
ADediting_1221934	ENST00000193322.8	chr6_108042617_-	3263	-1250.37	-1250.77	-1280.77
ADediting_1221935	ENST00000193322.8	chr6_108042619_-	3261	-1250.77	-1250.77	-1280.77
ADediting_1221936	ENST00000193322.8	chr6_108042632_-	3248	-1250.17	-1250.77	-1280.77
ADediting_1221937	ENST00000193322.8	chr6_108042661_-	3219	-1257.37	-1250.77	-1280.77
ADediting_1221938	ENST00000193322.8	chr6_108042685_-	3195	-1250.97	-1250.77	-1280.77
ADediting_1221939	ENST00000193322.8	chr6_108042691_-	3189	-1256.47	-1250.77	-1280.77
ADediting_1221940	ENST00000193322.8	chr6_108042693_-	3187	-1250.77	-1250.77	-1280.77

RNA A-to-I editing in lncRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1221904	ENST00000492130.1	chr6_108042166_-	1771	-631.47	-629.10	-656.07
ADediting_1221905	ENST00000492130.1	chr6_108042167_-	1770	-634.07	-629.10	-656.07
ADediting_1221906	ENST00000492130.1	chr6_108042169_-	1768	-628.70	-629.10	-656.07
ADediting_1221907	ENST00000492130.1	chr6_108042172_-	1765	-634.27	-629.10	-656.07
ADediting_1221908	ENST00000492130.1	chr6_108042173_-	1764	-628.70	-629.10	-656.07
ADediting_1221909	ENST00000492130.1	chr6_108042175_-	1762	-629.10	-629.10	-656.07
ADediting_1221910	ENST00000492130.1	chr6_108042187_-	1750	-628.80	-629.10	-656.07
ADediting_1221911	ENST00000492130.1	chr6_108042188_-	1749	-629.20	-629.10	-656.07
ADediting_1221912	ENST00000492130.1	chr6_108042189_-	1748	-628.80	-629.10	-656.07
ADediting_1221913	ENST00000492130.1	chr6_108042197_-	1740	-627.80	-629.10	-656.07
ADediting_1221914	ENST00000492130.1	chr6_108042210_-	1727	-628.50	-629.10	-656.07
ADediting_1221915	ENST00000492130.1	chr6_108042212_-	1725	-631.20	-629.10	-656.07
ADediting_1221916	ENST00000492130.1	chr6_108042214_-	1723	-629.10	-629.10	-656.07
ADediting_1221917	ENST00000492130.1	chr6_108042215_-	1722	-631.70	-629.10	-656.07
ADediting_1221918	ENST00000492130.1	chr6_108042220_-	1717	-628.30	-629.10	-656.07
ADediting_1221919	ENST00000492130.1	chr6_108042239_-	1698	-635.70	-629.10	-656.07
ADediting_1582187	ENST00000492130.1	chr6_108042240_-	1697	-628.40	-629.10	-656.07
ADediting_1221920	ENST00000492130.1	chr6_108042249_-	1688	-629.10	-629.10	-656.07
ADediting_1221921	ENST00000492130.1	chr6_108042252_-	1685	-628.70	-629.10	-656.07
ADediting_1221922	ENST00000492130.1	chr6_108042260_-	1677	-628.40	-629.10	-656.07
ADediting_1221923	ENST00000492130.1	chr6_108042264_-	1673	-628.20	-629.10	-656.07
ADediting_1221929	ENST00000492130.1	chr6_108042572_-	1667	-629.20	-629.10	-656.07
ADediting_1582189	ENST00000492130.1	chr6_108042580_-	1659	-629.90	-629.10	-656.07
ADediting_1221930	ENST00000492130.1	chr6_108042595_-	1644	-631.70	-629.10	-656.07
ADediting_1221931	ENST00000492130.1	chr6_108042609_-	1630	-629.40	-629.10	-656.07
ADediting_1221932	ENST00000492130.1	chr6_108042610_-	1629	-635.50	-629.10	-656.07
ADediting_1221933	ENST00000492130.1	chr6_108042615_-	1624	-628.80	-629.10	-656.07
ADediting_1221934	ENST00000492130.1	chr6_108042617_-	1622	-628.70	-629.10	-656.07
ADediting_1221935	ENST00000492130.1	chr6_108042619_-	1620	-629.10	-629.10	-656.07
ADediting_1221936	ENST00000492130.1	chr6_108042632_-	1607	-628.50	-629.10	-656.07
ADediting_1221937	ENST00000492130.1	chr6_108042661_-	1578	-635.70	-629.10	-656.07
ADediting_1221938	ENST00000492130.1	chr6_108042685_-	1554	-628.80	-629.10	-656.07
ADediting_1221939	ENST00000492130.1	chr6_108042691_-	1548	-634.37	-629.10	-656.07
ADediting_1221940	ENST00000492130.1	chr6_108042693_-	1546	-628.70	-629.10	-656.07

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Relation with ADAR for OSTM1

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
CER	ADediting_1221905	chr6_108042167_-	6.79588731238304e-06	0.358154653474092	0.000645782530109248	0.275453022287666	0.0705473546839968	0.148077267930794
TCX	ADediting_1221907	chr6_108042172_-	2.19830786594256e-06	0.375455909428879	1.03496646360449e-05	0.351440018213645	0.722695759153046	0.0292122465470409
DLPFC	ADediting_1221919	chr6_108042239_-	7.39357676622988e-10	0.340583660936895	1.26626013590272e-06	0.271101077606936	0.000437552310349926	0.198524831092242
CER	ADediting_1221919	chr6_108042239_-	8.38885086852624e-05	0.315525913820917	0.00018663001560355	0.300512013911762	0.464356182094797	-0.0601917888810358
DLPFC	ADediting_1221920	chr6_108042249_-	4.51486290267226e-11	0.362716115890797	7.62761449426552e-06	0.251114331558029	0.0159876342809873	0.136742300989774
CER	ADediting_1221920	chr6_108042249_-	9.14475884701535e-05	0.313944089593384	0.00127460220292325	0.260663512888342	0.606318216313106	0.0424128733975758
CER	ADediting_1221927	chr6_108042554_-	0.000326981430624343	0.289476491929493	1.79603192201455e-05	0.342402579143156	0.467301732874166	-0.0597962900905448
STG	ADediting_1221938	chr6_108042685_-	0.00251992517371386	0.325464211316994	0.0193048836263985	0.254858274045607	0.554198155339548	-0.0654472752291435
DLPFC	ADediting_1221939	chr6_108042691_-	9.11186668437549e-11	0.357316667625142	1.72135150368015e-06	0.267796768017036	0.0377550312933173	0.118058307369518
TCX	ADediting_1221939	chr6_108042691_-	2.06209134727305e-10	0.489498709367516	0.000225338880961124	0.296852142214231	0.00921294662912308	0.211971204077745
DLPFC	ADediting_1221943	chr6_108052245_-	0.0804883117177561	0.0994273042663491	0.987227751465545	-0.00091289937683314	3.4083493176173e-10	0.346888478508034
DLPFC	ADediting_1221950	chr6_108053626_-	0.543953713609224	0.0345959255800794	0.122533533982009	-0.087891407684863	9.0170563065325e-22	0.508312290909202
DLPFC	ADediting_1221966	chr6_108053712_-	0.45134213463174	0.0429314194449583	0.121715746246999	-0.0880833618214775	2.38130129540948e-23	0.524908971940735
DLPFC	ADediting_1221967	chr6_108053717_-	0.448379208314041	0.0432127685594548	0.315110394174848	-0.0572394253034219	3.53398074156298e-15	0.427136228895873
DLPFC	ADediting_1221973	chr6_108057037_-	0.539466081945095	-0.0349819567981491	0.0415620479268786	-0.115821832826283	6.52029245009514e-09	0.32205751624159
DLPFC	ADediting_1221974	chr6_108057106_-	0.278116318426444	-0.0617896404940366	0.023665541054245	-0.128488246682442	2.07145996715158e-09	0.331970011300631
DLPFC	ADediting_1221988	chr6_108060672_-	0.0962788296605509	0.0946317869850883	0.622277534538721	-0.0280871681132592	1.00630329820299e-16	0.448195820641416
DLPFC	ADediting_1221989	chr6_108060683_-	0.0746433600104865	0.101396218237988	0.605274447567709	0.0294666661538367	2.39382279747658e-10	0.349719183914828
DLPFC	ADediting_1221990	chr6_108061568_-	0.717004298135783	0.0206679438220385	0.366952106783742	-0.0514151646122319	4.33009034874434e-08	0.304858902068627
DLPFC	ADediting_1221995	chr6_108061664_-	0.0352025151408465	0.119667246436914	0.779918228708682	-0.0159336681083904	3.72199936764738e-18	0.466486667855667
DLPFC	ADediting_1221996	chr6_108061666_-	0.0435510081081608	0.114721362000012	0.765255936959311	-0.0170260980367644	1.91052881998178e-17	0.45754986350849
DLPFC	ADediting_1222003	chr6_108062580_-	0.0430218196101531	0.115009958840735	0.924556921290355	0.00540010253076093	1.16086384154248e-17	0.460299734629736
DLPFC	ADediting_1222004	chr6_108062658_-	0.568777050255187	0.0324882045647535	0.429833923733596	-0.0449982813604816	1.17130705194247e-08	0.316851961289841
DLPFC	ADediting_1222005	chr6_108062667_-	0.419056408731392	-0.0460563852078944	0.0462314830034794	-0.113303251050398	2.83913616814829e-09	0.329280112876801
DLPFC	ADediting_1222006	chr6_108062677_-	0.215554600067418	-0.0705357215802175	0.0114640045945018	-0.143429905535947	7.373916609511e-11	0.358954653591016
DLPFC	ADediting_1222007	chr6_108062693_-	0.391817474467486	0.048804217991813	0.0423901684619577	-0.11535836976885	4.93335912239727e-23	0.521654596937896
DLPFC	ADediting_1222010	chr6_108062736_-	0.293655821904625	-0.0598319456115036	0.0131362543794705	-0.140724461389524	1.75457102941901e-08	0.313201908146635
DLPFC	ADediting_1222046	chr6_108070135_-	0.467759475874707	-0.0413909079876571	0.035955052172258	-0.119182879526419	6.28084090869388e-09	0.322386658324797
DLPFC	ADediting_1222054	chr6_108070247_-	0.946210014796862	0.00384739058273394	0.0600672387763142	-0.106919460516047	4.06210509240024e-17	0.453338654811937
DLPFC	ADediting_1222061	chr6_108071112_-	0.713640754385363	-0.0209247930843362	0.0209613927028781	-0.131087416562059	4.76447619570279e-17	0.452440777215593
DLPFC	ADediting_1222067	chr6_108071373_-	0.967534962400036	-0.00232098484539836	0.0473623211103212	-0.112725584281924	1.13266164323904e-11	0.373062480260678
DLPFC	ADediting_1222072	chr6_108071434_-	0.915221108846866	-0.00607072404906638	0.139484124476237	-0.0841195656718243	4.95483032507463e-11	0.362006898788751

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	7.19020832395871e-36	0.631272492764214	8.29080767193365e-16	0.435893325401736	5.40349730521745e-24	0.531429321658587
AC	2.4402999625285e-78	0.870553447958708	5.0724401234917e-54	0.787378308469222	8.88276321794356e-14	0.448546533699454
PCC	2.1524473013145e-28	0.690531607148938	5.16210032709516e-31	0.713458908168063	0.0307077805321705	0.156415913212078
CER	4.10606465543768e-21	0.672829773030603	1.78674630210675e-11	0.513687493539154	0.613467753834961	0.0415736098800108
TCX	1.99794946453682e-35	0.805338648994217	6.35847629807307e-15	0.581137164909608	0.145615424097348	0.119389475084283
FP	6.91482860039971e-16	0.556881367319542	6.66840976678216e-23	0.651781379395787	0.517789352718718	0.0487913366041487
IFG	0.000411242761669541	0.652183501271405	0.000727208470252995	0.630579877462265	0.732641026964778	0.0719161861949546
PG	2.85370741984359e-49	0.833424806626633	2.67799379348711e-25	0.666969825262061	0.921022650493304	0.0073189516217112
STG	2.47801367392947e-13	0.694059511880035	1.18492690342201e-11	0.656644888724311	0.600601401412517	0.0579426217719952

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Relation with AD stages for OSTM1

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
TCX	ADediting_1221920	chr6_108042249_-	0.000488393123008633	0.332923444036451
TCX	ADediting_1221939	chr6_108042691_-	7.31351803627648e-06	0.420202157773439
TCX	ADediting_1221940	chr6_108042693_-	0.000804918299549206	0.320650353997955

Correlation between AD stages and this gene's expression

Tissue

P-val

Coeff.

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RelatedDrugs for OSTM1

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for OSTM1

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Gene summary for OSTM1

RNA A-to-I events for OSTM1

RNA editing positional annotations for OSTM1 using Annovar

RNA A-to-I editing events in the alternative splicing sites for OSTM1

Differntial gene expression between RNA A-to-I edited versus non-edited samples for OSTM1

Protein coding region RNA A-to-I editings for OSTM1

The effects of the RNA editing to the miRNA binding sites for OSTM1

The effects of the RNA editing to the stability of the RNA structures for OSTM1

Relation with ADAR for OSTM1

Relation with AD stages for OSTM1

RelatedDrugs for OSTM1

RelatedDiseases for OSTM1

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene