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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for LINC02495 |
 Gene summary |
| Gene information | Gene symbol | LINC02495 | Gene ID | 285484 |
| Gene name | long intergenic non-protein coding RNA 2495 | |
| Synonyms | - | |
| Cytomap | 4p16.1 | |
| Type of gene | ncRNA | |
| Description | - | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for LINC02495 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1142253(6206556, +), ADediting_1142254(6206558, +), ADediting_1142255(6206559, +), ADediting_1142256(6206613, +), ADediting_1142257(6206683, +), ADediting_1142258(6206729, +), ADediting_1142259(6206737, +), ADediting_1142260(6207514, +), ADediting_1142261(6207522, +), ADediting_1142262(6207527, +), ADediting_1142263(6207552, +), ADediting_1142264(6207592, +), ADediting_1142265(6207628, +), ADediting_1142266(6207645, +), ADediting_1142267(6207655, +), ADediting_1142268(6207680, +), ADediting_1142269(6207697, +), ADediting_1142270(6208112, +), ADediting_1142271(6208148, +), ADediting_1142272(6208180, +), ADediting_1142273(6208209, +), ADediting_1142274(6209719, +), ADediting_1142275(6209723, +), ADediting_1142276(6210682, +), ADediting_1142277(6210684, +), ADediting_1142278(6210686, +), ADediting_1142279(6210748, +), ADediting_1142280(6210754, +), ADediting_1142281(6210759, +), ADediting_1142282(6210781, +), ADediting_1142283(6210794, +), ADediting_1142284(6210796, +), ADediting_1142285(6210797, +), ADediting_1142286(6213836, +), ADediting_1142287(6213873, +), ADediting_1142288(6213885, +), ADediting_1142289(6213895, +), ADediting_1142290(6213990, +), ADediting_1142291(6214018, +), ADediting_1142292(6214030, +), ADediting_1142293(6236702, +), ADediting_1142294(6236709, +), ADediting_1142295(6236739, +), ADediting_1142296(6236741, +), ADediting_1142297(6236757, +), ADediting_1142298(6236771, +), ADediting_1142299(6236777, +), ADediting_1142300(6236790, +), ADediting_1142301(6236807, +), ADediting_1142302(6236877, +), ADediting_1142303(6236894, +), ADediting_1142304(6236906, +), ADediting_1142305(6236907, +), ADediting_1142306(6236933, +), ADediting_1142307(6236934, +), ADediting_1142308(6238054, +), ADediting_1142309(6238061, +), ADediting_1142310(6238132, +), ADediting_1142311(6238197, +), ADediting_1142312(6238198, +), ADediting_1142313(6238224, +), ADediting_1142314(6238238, +), ADediting_1142315(6238268, +), ADediting_1142316(6238283, +), ADediting_1142317(6238391, +), ADediting_1142318(6238479, +), ADediting_1142319(6238487, +), ADediting_1142320(6238583, +), ADediting_1142321(6238589, +), ADediting_1142322(6239154, +), ADediting_1142323(6239165, +), ADediting_1142324(6239195, +), ADediting_1142325(6239263, +), ADediting_1142326(6239280, +), ADediting_1142327(6239285, +), ADediting_1142328(6239288, +), ADediting_1142329(6239318, +), ADediting_1142330(6239344, +), ADediting_1142331(6239345, +), ADediting_1142332(6239351, +), ADediting_1142333(6239357, +), ADediting_1577921(6238647, +), |
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RNA editing positional annotations for LINC02495 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1142253 | chr4_6206556_+ | ncRNA_exonic |
| ADediting_1142254 | chr4_6206558_+ | ncRNA_exonic |
| ADediting_1142255 | chr4_6206559_+ | ncRNA_exonic |
| ADediting_1142256 | chr4_6206613_+ | ncRNA_exonic |
| ADediting_1142257 | chr4_6206683_+ | ncRNA_intronic |
| ADediting_1142258 | chr4_6206729_+ | ncRNA_intronic |
| ADediting_1142259 | chr4_6206737_+ | ncRNA_intronic |
| ADediting_1142260 | chr4_6207514_+ | ncRNA_intronic |
| ADediting_1142261 | chr4_6207522_+ | ncRNA_intronic |
| ADediting_1142262 | chr4_6207527_+ | ncRNA_intronic |
| ADediting_1142263 | chr4_6207552_+ | ncRNA_intronic |
| ADediting_1142264 | chr4_6207592_+ | ncRNA_intronic |
| ADediting_1142265 | chr4_6207628_+ | ncRNA_intronic |
| ADediting_1142266 | chr4_6207645_+ | ncRNA_intronic |
| ADediting_1142267 | chr4_6207655_+ | ncRNA_intronic |
| ADediting_1142268 | chr4_6207680_+ | ncRNA_intronic |
| ADediting_1142269 | chr4_6207697_+ | ncRNA_intronic |
| ADediting_1142270 | chr4_6208112_+ | ncRNA_intronic |
| ADediting_1142271 | chr4_6208148_+ | ncRNA_intronic |
| ADediting_1142272 | chr4_6208180_+ | ncRNA_intronic |
| ADediting_1142273 | chr4_6208209_+ | ncRNA_intronic |
| ADediting_1142274 | chr4_6209719_+ | ncRNA_intronic |
| ADediting_1142275 | chr4_6209723_+ | ncRNA_intronic |
| ADediting_1142276 | chr4_6210682_+ | ncRNA_intronic |
| ADediting_1142277 | chr4_6210684_+ | ncRNA_intronic |
| ADediting_1142278 | chr4_6210686_+ | ncRNA_intronic |
| ADediting_1142279 | chr4_6210748_+ | ncRNA_intronic |
| ADediting_1142280 | chr4_6210754_+ | ncRNA_intronic |
| ADediting_1142281 | chr4_6210759_+ | ncRNA_intronic |
| ADediting_1142282 | chr4_6210781_+ | ncRNA_intronic |
| ADediting_1142283 | chr4_6210794_+ | ncRNA_intronic |
| ADediting_1142284 | chr4_6210796_+ | ncRNA_intronic |
| ADediting_1142285 | chr4_6210797_+ | ncRNA_intronic |
| ADediting_1142286 | chr4_6213836_+ | ncRNA_intronic |
| ADediting_1142287 | chr4_6213873_+ | ncRNA_intronic |
| ADediting_1142288 | chr4_6213885_+ | ncRNA_intronic |
| ADediting_1142289 | chr4_6213895_+ | ncRNA_intronic |
| ADediting_1142290 | chr4_6213990_+ | ncRNA_intronic |
| ADediting_1142291 | chr4_6214018_+ | ncRNA_intronic |
| ADediting_1142292 | chr4_6214030_+ | ncRNA_intronic |
| ADediting_1142293 | chr4_6236702_+ | ncRNA_intronic |
| ADediting_1142294 | chr4_6236709_+ | ncRNA_intronic |
| ADediting_1142295 | chr4_6236739_+ | ncRNA_intronic |
| ADediting_1142296 | chr4_6236741_+ | ncRNA_intronic |
| ADediting_1142297 | chr4_6236757_+ | ncRNA_intronic |
| ADediting_1142298 | chr4_6236771_+ | ncRNA_intronic |
| ADediting_1142299 | chr4_6236777_+ | ncRNA_intronic |
| ADediting_1142300 | chr4_6236790_+ | ncRNA_intronic |
| ADediting_1142301 | chr4_6236807_+ | ncRNA_intronic |
| ADediting_1142302 | chr4_6236877_+ | ncRNA_intronic |
| ADediting_1142303 | chr4_6236894_+ | ncRNA_intronic |
| ADediting_1142304 | chr4_6236906_+ | ncRNA_intronic |
| ADediting_1142305 | chr4_6236907_+ | ncRNA_intronic |
| ADediting_1142306 | chr4_6236933_+ | ncRNA_intronic |
| ADediting_1142307 | chr4_6236934_+ | ncRNA_intronic |
| ADediting_1142308 | chr4_6238054_+ | ncRNA_exonic |
| ADediting_1142309 | chr4_6238061_+ | ncRNA_exonic |
| ADediting_1142310 | chr4_6238132_+ | ncRNA_exonic |
| ADediting_1142311 | chr4_6238197_+ | ncRNA_exonic |
| ADediting_1142312 | chr4_6238198_+ | ncRNA_exonic |
| ADediting_1142313 | chr4_6238224_+ | ncRNA_exonic |
| ADediting_1142314 | chr4_6238238_+ | ncRNA_exonic |
| ADediting_1142315 | chr4_6238268_+ | ncRNA_exonic |
| ADediting_1142316 | chr4_6238283_+ | ncRNA_exonic |
| ADediting_1142317 | chr4_6238391_+ | ncRNA_exonic |
| ADediting_1142318 | chr4_6238479_+ | ncRNA_exonic |
| ADediting_1142319 | chr4_6238487_+ | ncRNA_exonic |
| ADediting_1142320 | chr4_6238583_+ | ncRNA_exonic |
| ADediting_1142321 | chr4_6238589_+ | ncRNA_exonic |
| ADediting_1142322 | chr4_6239154_+ | ncRNA_exonic |
| ADediting_1142323 | chr4_6239165_+ | ncRNA_exonic |
| ADediting_1142324 | chr4_6239195_+ | ncRNA_exonic |
| ADediting_1142325 | chr4_6239263_+ | ncRNA_exonic |
| ADediting_1142326 | chr4_6239280_+ | ncRNA_exonic |
| ADediting_1142327 | chr4_6239285_+ | ncRNA_exonic |
| ADediting_1142328 | chr4_6239288_+ | ncRNA_exonic |
| ADediting_1142329 | chr4_6239318_+ | ncRNA_exonic |
| ADediting_1142330 | chr4_6239344_+ | ncRNA_exonic |
| ADediting_1142331 | chr4_6239345_+ | ncRNA_exonic |
| ADediting_1142332 | chr4_6239351_+ | ncRNA_exonic |
| ADediting_1142333 | chr4_6239357_+ | ncRNA_exonic |
| ADediting_1577921 | chr4_6238647_+ | ncRNA_exonic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1142253 | chr4_6206556_+ | SINE | Alu | Name=AluJr |
| ADediting_1142254 | chr4_6206558_+ | SINE | Alu | Name=AluJr |
| ADediting_1142255 | chr4_6206559_+ | SINE | Alu | Name=AluJr |
| ADediting_1142256 | chr4_6206613_+ | SINE | Alu | Name=AluJr |
| ADediting_1142257 | chr4_6206683_+ | SINE | Alu | Name=AluJr |
| ADediting_1142258 | chr4_6206729_+ | SINE | Alu | Name=AluJr |
| ADediting_1142259 | chr4_6206737_+ | SINE | Alu | Name=AluJr |
| ADediting_1142260 | chr4_6207514_+ | SINE | Alu | Name=AluJb |
| ADediting_1142261 | chr4_6207522_+ | SINE | Alu | Name=AluJb |
| ADediting_1142262 | chr4_6207527_+ | SINE | Alu | Name=AluJb |
| ADediting_1142263 | chr4_6207552_+ | SINE | Alu | Name=AluJb |
| ADediting_1142264 | chr4_6207592_+ | SINE | Alu | Name=AluJb |
| ADediting_1142265 | chr4_6207628_+ | SINE | Alu | Name=AluJb |
| ADediting_1142266 | chr4_6207645_+ | SINE | Alu | Name=AluJb |
| ADediting_1142267 | chr4_6207655_+ | SINE | Alu | Name=AluJb |
| ADediting_1142268 | chr4_6207680_+ | SINE | Alu | Name=AluJb |
| ADediting_1142269 | chr4_6207697_+ | SINE | Alu | Name=AluJb |
| ADediting_1142270 | chr4_6208112_+ | SINE | Alu | Name=AluSx |
| ADediting_1142271 | chr4_6208148_+ | SINE | Alu | Name=AluSx |
| ADediting_1142272 | chr4_6208180_+ | SINE | Alu | Name=AluSx |
| ADediting_1142273 | chr4_6208209_+ | SINE | Alu | Name=AluSx |
| ADediting_1142274 | chr4_6209719_+ | SINE | Alu | Name=AluSx |
| ADediting_1142275 | chr4_6209723_+ | SINE | Alu | Name=AluSx |
| ADediting_1142276 | chr4_6210682_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142277 | chr4_6210684_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142278 | chr4_6210686_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142279 | chr4_6210748_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142280 | chr4_6210754_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142281 | chr4_6210759_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142282 | chr4_6210781_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142283 | chr4_6210794_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142284 | chr4_6210796_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142285 | chr4_6210797_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142286 | chr4_6213836_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142287 | chr4_6213873_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142288 | chr4_6213885_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142289 | chr4_6213895_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142290 | chr4_6213990_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142291 | chr4_6214018_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142292 | chr4_6214030_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1142293 | chr4_6236702_+ | SINE | Alu | Name=AluJb |
| ADediting_1142294 | chr4_6236709_+ | SINE | Alu | Name=AluJb |
| ADediting_1142295 | chr4_6236739_+ | SINE | Alu | Name=AluJb |
| ADediting_1142296 | chr4_6236741_+ | SINE | Alu | Name=AluJb |
| ADediting_1142297 | chr4_6236757_+ | SINE | Alu | Name=AluJb |
| ADediting_1142298 | chr4_6236771_+ | SINE | Alu | Name=AluJb |
| ADediting_1142299 | chr4_6236777_+ | SINE | Alu | Name=AluJb |
| ADediting_1142300 | chr4_6236790_+ | SINE | Alu | Name=AluJb |
| ADediting_1142301 | chr4_6236807_+ | SINE | Alu | Name=AluJb |
| ADediting_1142302 | chr4_6236877_+ | SINE | Alu | Name=AluJb |
| ADediting_1142303 | chr4_6236894_+ | SINE | Alu | Name=AluJb |
| ADediting_1142304 | chr4_6236906_+ | SINE | Alu | Name=AluJb |
| ADediting_1142305 | chr4_6236907_+ | SINE | Alu | Name=AluJb |
| ADediting_1142306 | chr4_6236933_+ | SINE | Alu | Name=AluJb |
| ADediting_1142307 | chr4_6236934_+ | SINE | Alu | Name=AluJb |
| ADediting_1142308 | chr4_6238054_+ | SINE | Alu | Name=AluSx |
| ADediting_1142309 | chr4_6238061_+ | SINE | Alu | Name=AluSx |
| ADediting_1142310 | chr4_6238132_+ | SINE | Alu | Name=AluSx |
| ADediting_1142311 | chr4_6238197_+ | SINE | Alu | Name=AluSx |
| ADediting_1142312 | chr4_6238198_+ | SINE | Alu | Name=AluSx |
| ADediting_1142313 | chr4_6238224_+ | SINE | Alu | Name=AluSx |
| ADediting_1142314 | chr4_6238238_+ | SINE | Alu | Name=AluSx |
| ADediting_1142315 | chr4_6238268_+ | SINE | Alu | Name=AluSx |
| ADediting_1142316 | chr4_6238283_+ | SINE | Alu | Name=AluSx |
| ADediting_1142317 | chr4_6238391_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142318 | chr4_6238479_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142319 | chr4_6238487_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142320 | chr4_6238583_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142321 | chr4_6238589_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1142322 | chr4_6239154_+ | SINE | Alu | Name=AluSz |
| ADediting_1142323 | chr4_6239165_+ | SINE | Alu | Name=AluSz |
| ADediting_1142324 | chr4_6239195_+ | SINE | Alu | Name=AluSz |
| ADediting_1142325 | chr4_6239263_+ | SINE | Alu | Name=AluSz |
| ADediting_1142326 | chr4_6239280_+ | SINE | Alu | Name=AluSz |
| ADediting_1142327 | chr4_6239285_+ | SINE | Alu | Name=AluSz |
| ADediting_1142328 | chr4_6239288_+ | SINE | Alu | Name=AluSz |
| ADediting_1142329 | chr4_6239318_+ | SINE | Alu | Name=AluSz |
| ADediting_1142330 | chr4_6239344_+ | SINE | Alu | Name=AluSz |
| ADediting_1142331 | chr4_6239345_+ | SINE | Alu | Name=AluSz |
| ADediting_1142332 | chr4_6239351_+ | SINE | Alu | Name=AluSz |
| ADediting_1142333 | chr4_6239357_+ | SINE | Alu | Name=AluSz |
| ADediting_1577921 | chr4_6238647_+ | SINE | Alu | Name=AluSz6 |
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RNA A-to-I editing events in the alternative splicing sites for LINC02495 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| A3SS | ADediting_1142322 | chr4_6239154_+ | 6239139:6239161 | 3ss | 5i | GTTTGTTTGTTTTGAAACAGAGT | 6.73 | GTTTGTTTGTTTTGAGACAGAGT | 1.15 |
| A3SS | ADediting_1142322 | chr4_6239154_+ | 6239139:6239161 | 3ss | 5i | GTTTGTTTGTTTTGAAACAGAGT | 6.73 | GTTTGTTTGTTTTGAGACAGAGT | 1.15 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for LINC02495 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for LINC02495 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for LINC02495 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1142310 | chr4_6238132_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-1306-3p | chr4 | 6238126 | 6238132 | 7mer-m8 | 6238116 | 6238133 | 152 | -23.71 |
| ADediting_1142311 | chr4_6238197_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-513a-5p | chr4 | 6238192 | 6238198 | 7mer-m8 | 6238182 | 6238199 | 160 | -21.48 |
| ADediting_1142311 | chr4_6238197_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-638 | chr4 | 6238197 | 6238203 | 7mer-1a | 6238179 | 6238203 | 163 | -35.62 |
| ADediting_1142312 | chr4_6238198_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-8052 | chr4 | 6238197 | 6238203 | 7mer-1a | 6238185 | 6238203 | 143 | -23.77 |
| ADediting_1142315 | chr4_6238268_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-149-5p | chr4 | 6238262 | 6238268 | 7mer-m8 | 6238244 | 6238269 | 155 | -29.26 |
| ADediting_1142318 | chr4_6238479_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-1306-3p | chr4 | 6238473 | 6238479 | 7mer-m8 | 6238463 | 6238480 | 152 | -23.71 |
| ADediting_1142319 | chr4_6238487_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-412-3p | chr4 | 6238481 | 6238487 | 7mer-m8 | 6238466 | 6238488 | 153 | -17.3 |
| ADediting_1142319 | chr4_6238487_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4508 | chr4 | 6238486 | 6238492 | 7mer-m8 | 6238477 | 6238493 | 140 | -21.85 |
| ADediting_1142319 | chr4_6238487_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6754-3p | chr4 | 6238481 | 6238487 | 7mer-m8 | 6238468 | 6238488 | 144 | -15.76 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-1343-3p | chr4 | 6238585 | 6238591 | 7mer-m8 | 6238569 | 6238592 | 150 | -28.37 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-660-3p | chr4 | 6238587 | 6238593 | 7mer-m8 | 6238573 | 6238594 | 162 | -19.71 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6742-3p | chr4 | 6238584 | 6238591 | 8mer-1a | 6238572 | 6238591 | 145 | -14.93 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6783-3p | chr4 | 6238585 | 6238591 | 7mer-m8 | 6238572 | 6238592 | 146 | -17.13 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6791-3p | chr4 | 6238588 | 6238594 | 7mer-m8 | 6238576 | 6238595 | 161 | -24.53 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6829-3p | chr4 | 6238588 | 6238594 | 7mer-m8 | 6238576 | 6238595 | 144 | -18.45 |
| ADediting_1142322 | chr4_6239154_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-371b-5p | chr4 | 6239148 | 6239155 | 8mer-1a | 6239134 | 6239155 | 146 | -9.91 |
| ADediting_1142322 | chr4_6239154_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-373-5p | chr4 | 6239148 | 6239155 | 8mer-1a | 6239134 | 6239155 | 145 | -9.85 |
| ADediting_1142322 | chr4_6239154_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-616-5p | chr4 | 6239148 | 6239155 | 8mer-1a | 6239134 | 6239155 | 147 | -11.65 |
| ADediting_1142322 | chr4_6239154_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6888-3p | chr4 | 6239153 | 6239159 | 7mer-m8 | 6239140 | 6239160 | 151 | -15.3 |
| ADediting_1142329 | chr4_6239318_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-3622a-3p | chr4 | 6239315 | 6239322 | 8mer-1a | 6239301 | 6239322 | 145 | -13.55 |
| ADediting_1142329 | chr4_6239318_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-3622b-3p | chr4 | 6239315 | 6239322 | 8mer-1a | 6239302 | 6239322 | 152 | -17.6 |
| ADediting_1142329 | chr4_6239318_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-544b | chr4 | 6239313 | 6239319 | 7mer-m8 | 6239300 | 6239320 | 157 | -17.11 |
| ADediting_1142329 | chr4_6239318_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-7162-3p | chr4 | 6239312 | 6239318 | 7mer-m8 | 6239297 | 6239319 | 151 | -20.78 |
| ADediting_1142330 | chr4_6239344_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-326 | chr4 | 6239340 | 6239346 | 7mer-m8 | 6239328 | 6239347 | 140 | -13.37 |
| ADediting_1142330 | chr4_6239344_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-330-5p | chr4 | 6239340 | 6239346 | 7mer-m8 | 6239326 | 6239347 | 140 | -19.8 |
| ADediting_1142330 | chr4_6239344_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4314 | chr4 | 6239339 | 6239345 | 7mer-m8 | 6239329 | 6239346 | 140 | -21.22 |
| ADediting_1142330 | chr4_6239344_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-514a-5p | chr4 | 6239341 | 6239347 | 7mer-m8 | 6239325 | 6239348 | 146 | -18.76 |
| ADediting_1142331 | chr4_6239345_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-3189-3p | chr4 | 6239340 | 6239346 | 7mer-m8 | 6239325 | 6239347 | 153 | -23.98 |
| ADediting_1142331 | chr4_6239345_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6813-3p | chr4 | 6239341 | 6239347 | 7mer-m8 | 6239328 | 6239348 | 140 | -11.13 |
| ADediting_1142332 | chr4_6239351_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-383-3p | chr4 | 6239345 | 6239351 | 7mer-m8 | 6239334 | 6239352 | 140 | -16.5 |
| ADediting_1142332 | chr4_6239351_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-7977 | chr4 | 6239348 | 6239354 | 7mer-m8 | 6239338 | 6239355 | 140 | -13.07 |
| ADediting_1577921 | chr4_6238647_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-339-5p | chr4 | 6238642 | 6238648 | 7mer-m8 | 6238627 | 6238649 | 163 | -27.9 |
| ADediting_1577921 | chr4_6238647_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6726-3p | chr4 | 6238645 | 6238651 | 7mer-m8 | 6238633 | 6238652 | 168 | -33.7 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1142308 | chr4_6238054_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-3934-5p | chr4 | 6238052 | 6238058 | 7mer-m8 | 6238038 | 6238059 | 146 | -18.9 |
| ADediting_1142308 | chr4_6238054_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-552-3p | chr4 | 6238053 | 6238060 | 8mer-1a | 6238042 | 6238060 | 144 | -13.63 |
| ADediting_1142309 | chr4_6238061_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-10399-5p | chr4 | 6238056 | 6238062 | 7mer-m8 | 6238042 | 6238063 | 148 | -10.07 |
| ADediting_1142309 | chr4_6238061_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-5089-5p | chr4 | 6238060 | 6238066 | 7mer-m8 | 6238048 | 6238067 | 145 | -11.34 |
| ADediting_1142309 | chr4_6238061_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6504-3p | chr4 | 6238056 | 6238062 | 7mer-m8 | 6238042 | 6238063 | 141 | -11.77 |
| ADediting_1142310 | chr4_6238132_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4716-5p | chr4 | 6238129 | 6238135 | 7mer-m8 | 6238115 | 6238136 | 140 | -10.69 |
| ADediting_1142310 | chr4_6238132_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4781-3p | chr4 | 6238127 | 6238133 | 7mer-m8 | 6238116 | 6238134 | 144 | -13.86 |
| ADediting_1142311 | chr4_6238197_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-10399-5p | chr4 | 6238193 | 6238199 | 7mer-m8 | 6238179 | 6238200 | 152 | -11.75 |
| ADediting_1142311 | chr4_6238197_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6504-3p | chr4 | 6238193 | 6238199 | 7mer-m8 | 6238179 | 6238200 | 148 | -14.2 |
| ADediting_1142311 | chr4_6238197_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-7151-3p | chr4 | 6238191 | 6238198 | 8mer-1a | 6238182 | 6238198 | 142 | -13.26 |
| ADediting_1142312 | chr4_6238198_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-10399-5p | chr4 | 6238193 | 6238199 | 7mer-m8 | 6238179 | 6238200 | 152 | -11.75 |
| ADediting_1142312 | chr4_6238198_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-5089-5p | chr4 | 6238197 | 6238204 | 8mer-1a | 6238185 | 6238204 | 146 | -12.9 |
| ADediting_1142312 | chr4_6238198_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6504-3p | chr4 | 6238193 | 6238199 | 7mer-m8 | 6238179 | 6238200 | 148 | -14.2 |
| ADediting_1142313 | chr4_6238224_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-1976 | chr4 | 6238222 | 6238229 | 8mer-1a | 6238209 | 6238229 | 149 | -21.37 |
| ADediting_1142313 | chr4_6238224_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6747-3p | chr4 | 6238220 | 6238227 | 8mer-1a | 6238206 | 6238227 | 150 | -24.11 |
| ADediting_1142314 | chr4_6238238_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-10b-3p | chr4 | 6238237 | 6238243 | 7mer-m8 | 6238219 | 6238244 | 149 | -15.23 |
| ADediting_1142317 | chr4_6238391_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4252 | chr4 | 6238390 | 6238396 | 7mer-m8 | 6238378 | 6238397 | 154 | -21.22 |
| ADediting_1142317 | chr4_6238391_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-550b-2-5p | chr4 | 6238385 | 6238391 | 7mer-m8 | 6238366 | 6238392 | 142 | -15.34 |
| ADediting_1142317 | chr4_6238391_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6529-3p | chr4 | 6238386 | 6238392 | 7mer-m8 | 6238374 | 6238393 | 146 | -17.18 |
| ADediting_1142317 | chr4_6238391_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6889-3p | chr4 | 6238386 | 6238392 | 7mer-m8 | 6238375 | 6238393 | 148 | -16.26 |
| ADediting_1142318 | chr4_6238479_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4716-5p | chr4 | 6238476 | 6238482 | 7mer-m8 | 6238462 | 6238483 | 140 | -11.3 |
| ADediting_1142318 | chr4_6238479_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-4781-3p | chr4 | 6238474 | 6238480 | 7mer-m8 | 6238463 | 6238481 | 144 | -13.86 |
| ADediting_1142319 | chr4_6238487_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-193b-5p | chr4 | 6238485 | 6238491 | 7mer-m8 | 6238471 | 6238492 | 142 | -20.42 |
| ADediting_1142320 | chr4_6238583_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-498-5p | chr4 | 6238578 | 6238584 | 7mer-m8 | 6238563 | 6238585 | 142 | -14.57 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-2682-3p | chr4 | 6238588 | 6238594 | 7mer-m8 | 6238574 | 6238595 | 140 | -19.81 |
| ADediting_1142321 | chr4_6238589_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6781-3p | chr4 | 6238588 | 6238594 | 7mer-m8 | 6238569 | 6238595 | 145 | -19.33 |
| ADediting_1142323 | chr4_6239165_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-6864-3p | chr4 | 6239159 | 6239165 | 7mer-m8 | 6239145 | 6239166 | 145 | -15.85 |
| ADediting_1142323 | chr4_6239165_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-759 | chr4 | 6239164 | 6239170 | 7mer-m8 | 6239151 | 6239171 | 149 | -15.6 |
| ADediting_1142324 | chr4_6239195_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-12121 | chr4 | 6239189 | 6239195 | 7mer-m8 | 6239177 | 6239196 | 145 | -20.76 |
| ADediting_1142327 | chr4_6239285_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-569 | chr4 | 6239284 | 6239290 | 7mer-m8 | 6239273 | 6239291 | 147 | -8.48 |
| ADediting_1142328 | chr4_6239288_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-569 | chr4 | 6239284 | 6239290 | 7mer-m8 | 6239273 | 6239291 | 147 | -8.48 |
| ADediting_1142330 | chr4_6239344_+ | ENSG00000249896.2 | ENST00000508601.2 | LINC02495-201 | hsa-miR-887-5p | chr4 | 6239338 | 6239345 | 8mer-1a | 6239325 | 6239345 | 149 | -14.24 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
| Differentially expressed lncRNA-miRNA network |
 |
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The effects of the RNA editing to the stability of the RNA structures for LINC02495 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000508601.2 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1142308 | ENST00000508601.2 | chr4_6238054_+ | 2284 | -1611.60 | -1606.20 | -1666.20 |
| ADediting_1142309 | ENST00000508601.2 | chr4_6238061_+ | 2291 | -1606.20 | -1606.20 | -1666.20 |
| ADediting_1142310 | ENST00000508601.2 | chr4_6238132_+ | 2362 | -1609.50 | -1606.20 | -1666.20 |
| ADediting_1142311 | ENST00000508601.2 | chr4_6238197_+ | 2427 | -1606.20 | -1606.20 | -1666.20 |
| ADediting_1142312 | ENST00000508601.2 | chr4_6238198_+ | 2428 | -1606.20 | -1606.20 | -1666.20 |
| ADediting_1142313 | ENST00000508601.2 | chr4_6238224_+ | 2454 | -1606.00 | -1606.20 | -1666.20 |
| ADediting_1142314 | ENST00000508601.2 | chr4_6238238_+ | 2468 | -1608.20 | -1606.20 | -1666.20 |
| ADediting_1142315 | ENST00000508601.2 | chr4_6238268_+ | 2498 | -1606.20 | -1606.20 | -1666.20 |
| ADediting_1142316 | ENST00000508601.2 | chr4_6238283_+ | 2513 | -1608.80 | -1606.20 | -1666.20 |
| ADediting_1142317 | ENST00000508601.2 | chr4_6238391_+ | 2621 | -1607.30 | -1606.20 | -1666.20 |
| ADediting_1142318 | ENST00000508601.2 | chr4_6238479_+ | 2709 | -1609.60 | -1606.20 | -1666.20 |
| ADediting_1142319 | ENST00000508601.2 | chr4_6238487_+ | 2717 | -1607.40 | -1606.20 | -1666.20 |
| ADediting_1142320 | ENST00000508601.2 | chr4_6238583_+ | 2813 | -1606.20 | -1606.20 | -1666.20 |
| ADediting_1142321 | ENST00000508601.2 | chr4_6238589_+ | 2819 | -1612.80 | -1606.20 | -1666.20 |
| ADediting_1577921 | ENST00000508601.2 | chr4_6238647_+ | 2877 | -1605.40 | -1606.20 | -1666.20 |
| ADediting_1142322 | ENST00000508601.2 | chr4_6239154_+ | 3384 | -1612.60 | -1606.20 | -1666.20 |
| ADediting_1142323 | ENST00000508601.2 | chr4_6239165_+ | 3395 | -1611.60 | -1606.20 | -1666.20 |
| ADediting_1142324 | ENST00000508601.2 | chr4_6239195_+ | 3425 | -1611.30 | -1606.20 | -1666.20 |
| ADediting_1142325 | ENST00000508601.2 | chr4_6239263_+ | 3493 | -1605.90 | -1606.20 | -1666.20 |
| ADediting_1142326 | ENST00000508601.2 | chr4_6239280_+ | 3510 | -1611.60 | -1606.20 | -1666.20 |
| ADediting_1142327 | ENST00000508601.2 | chr4_6239285_+ | 3515 | -1609.50 | -1606.20 | -1666.20 |
| ADediting_1142328 | ENST00000508601.2 | chr4_6239288_+ | 3518 | -1609.70 | -1606.20 | -1666.20 |
| ADediting_1142329 | ENST00000508601.2 | chr4_6239318_+ | 3548 | -1612.80 | -1606.20 | -1666.20 |
| ADediting_1142330 | ENST00000508601.2 | chr4_6239344_+ | 3574 | -1606.30 | -1606.20 | -1666.20 |
| ADediting_1142331 | ENST00000508601.2 | chr4_6239345_+ | 3575 | -1605.90 | -1606.20 | -1666.20 |
| ADediting_1142332 | ENST00000508601.2 | chr4_6239351_+ | 3581 | -1612.80 | -1606.20 | -1666.20 |
| ADediting_1142333 | ENST00000508601.2 | chr4_6239357_+ | 3587 | -1606.20 | -1606.20 | -1666.20 |
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Relation with ADAR for LINC02495 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1142260 | chr4_6207514_+ | 0.00292584527145319 | 0.168463828555657 | 0.157378531313127 | 0.0805014050527266 | 3.71692570827017e-18 | 0.466494012483695 |
| DLPFC | ADediting_1142278 | chr4_6210686_+ | 0.536748146727764 | -0.0352165345214795 | 0.0411890671384522 | -0.116033119230313 | 2.87726740442963e-15 | 0.428393469063607 |
| DLPFC | ADediting_1142279 | chr4_6210748_+ | 0.78361238049746 | -0.0156593624233623 | 0.0594753994881285 | -0.107166119222299 | 1.5076278688065e-12 | 0.387522025811301 |
| DLPFC | ADediting_1142280 | chr4_6210754_+ | 0.813968930603527 | -0.0134182564308981 | 0.165563833080825 | -0.0789495377499738 | 2.55350191169568e-09 | 0.330187786804206 |
| TCX | ADediting_1142295 | chr4_6236739_+ | 0.0491263988603308 | 0.160942657839271 | 0.000136931702372415 | 0.306421835679481 | 0.080994338154888 | -0.14293743041885 |
| TCX | ADediting_1142298 | chr4_6236771_+ | 0.111059143654753 | 0.130639343270972 | 0.000163929351146421 | 0.303002592295229 | 0.0497282620277373 | -0.160522912477503 |
| TCX | ADediting_1142310 | chr4_6238132_+ | 0.00872769359789071 | 0.213441660080805 | 4.44510794419451e-07 | 0.39837400842332 | 0.00811145238678837 | -0.21541704384731 |
| DLPFC | ADediting_1142313 | chr4_6238224_+ | 0.00142282671974499 | 0.180418503890639 | 4.40621414285282e-09 | 0.32548563708046 | 0.0477805893002671 | 0.112514842740695 |
| TCX | ADediting_1142313 | chr4_6238224_+ | 0.0030885130637944 | 0.240049566560383 | 0.00014051061346286 | 0.30593416961174 | 0.58142216498188 | -0.0453705109452886 |
| DLPFC | ADediting_1142321 | chr4_6238589_+ | 0.00198155370080121 | 0.175018826517556 | 0.0469401177398803 | 0.112939893937913 | 9.11228716963006e-12 | 0.374657047845621 |
| DLPFC | ADediting_1142323 | chr4_6239165_+ | 1.69747459930094e-07 | 0.291722210382561 | 1.81981265810494e-16 | 0.444789637072338 | 0.0102025591940541 | 0.14571212811705 |
| PCC | ADediting_1142323 | chr4_6239165_+ | 7.55333318408427e-09 | 0.402881090003749 | 2.187282354677e-10 | 0.438680467766942 | 0.272181628435485 | 0.0798494987495856 |
| AC | ADediting_1142325 | chr4_6239263_+ | 0.000148608326819943 | 0.237659253357555 | 1.06608336597239e-07 | 0.328430298387512 | 0.383213607854545 | 0.0553847347679908 |
| DLPFC | ADediting_1142328 | chr4_6239288_+ | 4.64002909670884e-07 | 0.281611391426917 | 4.37652261454487e-11 | 0.362953080352888 | 0.00226009066669774 | 0.172831858644589 |
| TCX | ADediting_1142328 | chr4_6239288_+ | 0.0305632082344411 | 0.176671308645976 | 5.05947486574568e-05 | 0.324623222583079 | 0.178067521006639 | -0.110547405150233 |
| DLPFC | ADediting_1142329 | chr4_6239318_+ | 1.82902266873856e-06 | 0.267138602658464 | 1.03384726266593e-12 | 0.390149757237872 | 0.0157193229301601 | 0.137089203412645 |
| DLPFC | ADediting_1142332 | chr4_6239351_+ | 2.36143058118199e-05 | 0.237626327541803 | 4.57902621894384e-12 | 0.379644691059546 | 0.00239331747405097 | 0.171871547210604 |
| PCC | ADediting_1142332 | chr4_6239351_+ | 0.000174947787192552 | 0.268300678749774 | 3.93178173634962e-07 | 0.357179339292129 | 0.695665353232397 | -0.0284859222202646 |
| TCX | ADediting_1142332 | chr4_6239351_+ | 0.0319584990726848 | 0.175241155895932 | 3.08329759576077e-05 | 0.333261834972301 | 0.0692227640510406 | -0.148772251613613 |
| DLPFC | ADediting_1142333 | chr4_6239357_+ | 3.42246530808726e-07 | 0.284713750711231 | 2.08953377905176e-09 | 0.331896233679549 | 0.0670762986358646 | 0.104140782806316 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.77054043456547e-33 | 0.612303741810827 | 1.97768824162322e-24 | 0.535769090681757 | 1.73747752126503e-30 | 0.590228400652026 |
| AC | 4.98646200989198e-55 | 0.791827721407695 | 8.42509836740139e-60 | 0.811515121314893 | 0.00261924854452567 | 0.189541086079795 |
| PCC | 5.77449798138008e-60 | 0.870061336655791 | 1.88424940589532e-84 | 0.930644282596076 | 0.0111601883727383 | 0.183262595917819 |
| CER | 2.53897591796536e-12 | 0.531706816851104 | 2.38827003716029e-24 | 0.710464811999952 | 9.83372207097469e-06 | 0.352264512834745 |
| TCX | 1.0394446080465e-18 | 0.640764498835403 | 1.62585889805395e-30 | 0.768639488454296 | 0.00327024244821502 | -0.238658164502415 |
| FP | 1.55292586176277e-22 | 0.647540744242539 | 1.13822668937338e-23 | 0.660436674673271 | 0.000105813883446728 | 0.286486585078377 |
| IFG | 5.62276563631353e-06 | 0.774095722253959 | 1.28502726877602e-08 | 0.872705419936521 | 0.461538663026867 | 0.154276340098496 |
| PG | 3.85364007923573e-25 | 0.665329092531237 | 1.77881480466128e-28 | 0.697885112743552 | 0.514891031363004 | -0.0480476090854343 |
| STG | 6.46553309006923e-16 | 0.742302338817297 | 2.93481987692141e-14 | 0.712528160202457 | 0.230523307606247 | 0.132228881796003 |
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Relation with AD stages for LINC02495 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.71509782221383e-06 | 0.433900961159751 |
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RelatedDrugs for LINC02495 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LINC02495 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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