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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TOR1B |
 Gene summary |
| Gene information | Gene symbol | TOR1B | Gene ID | 27348 |
| Gene name | torsin family 1 member B | |
| Synonyms | DQ1 | |
| Cytomap | 9q34.11 | |
| Type of gene | protein-coding | |
| Description | torsin-1Btorsin ATPase-1Btorsin B | |
| Modification date | 20200313 | |
| UniProtAcc | O14657, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| TOR1B | GO:0007029 | endoplasmic reticulum organization | 24275647 |
Top |
RNA A-to-I events for TOR1B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1448703(129804623, +), ADediting_1448704(129804646, +), ADediting_1448705(129804651, +), ADediting_1448706(129804665, +), ADediting_1448707(129804685, +), ADediting_1448708(129804741, +), ADediting_1448709(129804768, +), ADediting_1448710(129804794, +), ADediting_1448711(129804827, +), ADediting_1448712(129804922, +), ADediting_1448713(129804927, +), ADediting_1448714(129804991, +), ADediting_1448715(129805181, +), ADediting_1448716(129805221, +), ADediting_1448717(129805334, +), ADediting_1448718(129805404, +), ADediting_1448719(129805407, +), ADediting_1448720(129805430, +), ADediting_1448721(129806108, +), ADediting_1448722(129806667, +), ADediting_1448723(129806701, +), ADediting_1448724(129806715, +), ADediting_1448725(129806716, +), ADediting_1448726(129806717, +), ADediting_1448727(129806764, +), ADediting_1448728(129806774, +), ADediting_1448729(129806817, +), ADediting_1448730(129806840, +), ADediting_1448731(129806848, +), ADediting_1448732(129807575, +), ADediting_1448733(129807589, +), ADediting_1448734(129807591, +), ADediting_1448735(129807597, +), ADediting_1448736(129807598, +), ADediting_1448737(129807619, +), ADediting_1448738(129807660, +), ADediting_1448739(129807662, +), ADediting_1448740(129807669, +), ADediting_1448741(129807670, +), ADediting_1448742(129807681, +), ADediting_1448743(129807684, +), ADediting_1448744(129807685, +), ADediting_1448745(129807686, +), ADediting_1448746(129807687, +), ADediting_1448747(129807695, +), ADediting_1448748(129807696, +), ADediting_1448749(129807699, +), ADediting_1448750(129807725, +), ADediting_1448751(129807735, +), ADediting_1448752(129807752, +), ADediting_1448753(129807753, +), ADediting_1448754(129807791, +), ADediting_1448755(129807801, +), ADediting_1448756(129807803, +), ADediting_1448757(129807828, +), ADediting_1448758(129807916, +), ADediting_1448759(129807934, +), ADediting_1448760(129807943, +), ADediting_1448761(129807962, +), ADediting_1448762(129807994, +), ADediting_1448763(129808038, +), ADediting_1448764(129808236, +), ADediting_1448765(129808242, +), ADediting_1448766(129808243, +), ADediting_1448767(129808264, +), ADediting_1448768(129808273, +), ADediting_1448769(129808283, +), ADediting_1448770(129808288, +), ADediting_1448771(129808297, +), ADediting_1448772(129808320, +), ADediting_1448773(129808321, +), ADediting_1448774(129808322, +), ADediting_1448775(129808333, +), ADediting_1448776(129808336, +), ADediting_1448777(129808337, +), ADediting_1448778(129808351, +), ADediting_1448779(129808378, +), ADediting_1448780(129808379, +), ADediting_1448781(129808384, +), ADediting_1448782(129808388, +), ADediting_1448783(129808392, +), ADediting_1448784(129808405, +), ADediting_1448785(129808407, +), ADediting_1448786(129808408, +), ADediting_1448787(129808411, +), ADediting_1448788(129808414, +), ADediting_1448789(129808419, +), ADediting_1448790(129808420, +), ADediting_1448791(129808427, +), ADediting_1448792(129808444, +), ADediting_1448793(129808451, +), ADediting_1448794(129808494, +), ADediting_1448795(129808499, +), ADediting_1448796(129808606, +), ADediting_1448797(129808611, +), ADediting_1448798(129808630, +), ADediting_1448799(129808636, +), ADediting_1448800(129808649, +), ADediting_1448801(129808650, +), ADediting_1448802(129808651, +), ADediting_1448803(129808662, +), ADediting_1448804(129808667, +), ADediting_1448805(129808675, +), ADediting_1448806(129808679, +), ADediting_1448807(129808689, +), ADediting_1448808(129808695, +), ADediting_1448809(129808717, +), ADediting_1448810(129808718, +), ADediting_1448811(129808732, +), ADediting_1448812(129808735, +), ADediting_1448813(129808737, +), ADediting_1448814(129808747, +), ADediting_1448815(129808786, +), ADediting_1448816(129808795, +), ADediting_1448817(129808813, +), ADediting_1448818(129808814, +), ADediting_1448819(129808826, +), ADediting_1448820(129808828, +), ADediting_1448821(129808832, +), ADediting_1448822(129809392, +), ADediting_1448823(129809725, +), ADediting_1448824(129809734, +), ADediting_1448825(129809747, +), ADediting_1448826(129809758, +), ADediting_1448827(129809766, +), ADediting_1448828(129809767, +), ADediting_1448829(129809773, +), ADediting_1448830(129809774, +), ADediting_1448831(129809784, +), ADediting_1448832(129809819, +), ADediting_1448833(129809831, +), ADediting_1592698(129804677, +), ADediting_1592699(129805175, +), ADediting_1592700(129805307, +), ADediting_1592701(129806662, +), ADediting_1592702(129806712, +), ADediting_1592703(129806813, +), ADediting_1592704(129808039, +), ADediting_1592705(129808265, +), ADediting_1592706(129808440, +), ADediting_1592707(129808752, +), ADediting_1592708(129808774, +), |
Top |
RNA editing positional annotations for TOR1B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_1448822 | chr9_129809392_+ | nonsynonymous SNV | ENST00000259339.7 | c.A820G | p.I274V | 1.0 | 0.001 | 0.44 |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1448703 | chr9_129804623_+ | intronic |
| ADediting_1448704 | chr9_129804646_+ | intronic |
| ADediting_1448705 | chr9_129804651_+ | intronic |
| ADediting_1448706 | chr9_129804665_+ | intronic |
| ADediting_1448707 | chr9_129804685_+ | intronic |
| ADediting_1448708 | chr9_129804741_+ | intronic |
| ADediting_1448709 | chr9_129804768_+ | intronic |
| ADediting_1448710 | chr9_129804794_+ | intronic |
| ADediting_1448711 | chr9_129804827_+ | intronic |
| ADediting_1448712 | chr9_129804922_+ | intronic |
| ADediting_1448713 | chr9_129804927_+ | intronic |
| ADediting_1448714 | chr9_129804991_+ | intronic |
| ADediting_1448715 | chr9_129805181_+ | intronic |
| ADediting_1448716 | chr9_129805221_+ | intronic |
| ADediting_1448717 | chr9_129805334_+ | intronic |
| ADediting_1448718 | chr9_129805404_+ | intronic |
| ADediting_1448719 | chr9_129805407_+ | intronic |
| ADediting_1448720 | chr9_129805430_+ | intronic |
| ADediting_1448721 | chr9_129806108_+ | intronic |
| ADediting_1448722 | chr9_129806667_+ | intronic |
| ADediting_1448723 | chr9_129806701_+ | intronic |
| ADediting_1448724 | chr9_129806715_+ | intronic |
| ADediting_1448725 | chr9_129806716_+ | intronic |
| ADediting_1448726 | chr9_129806717_+ | intronic |
| ADediting_1448727 | chr9_129806764_+ | intronic |
| ADediting_1448728 | chr9_129806774_+ | intronic |
| ADediting_1448729 | chr9_129806817_+ | intronic |
| ADediting_1448730 | chr9_129806840_+ | intronic |
| ADediting_1448731 | chr9_129806848_+ | intronic |
| ADediting_1448732 | chr9_129807575_+ | intronic |
| ADediting_1448733 | chr9_129807589_+ | intronic |
| ADediting_1448734 | chr9_129807591_+ | intronic |
| ADediting_1448735 | chr9_129807597_+ | intronic |
| ADediting_1448736 | chr9_129807598_+ | intronic |
| ADediting_1448737 | chr9_129807619_+ | intronic |
| ADediting_1448738 | chr9_129807660_+ | intronic |
| ADediting_1448739 | chr9_129807662_+ | intronic |
| ADediting_1448740 | chr9_129807669_+ | intronic |
| ADediting_1448741 | chr9_129807670_+ | intronic |
| ADediting_1448742 | chr9_129807681_+ | intronic |
| ADediting_1448743 | chr9_129807684_+ | intronic |
| ADediting_1448744 | chr9_129807685_+ | intronic |
| ADediting_1448745 | chr9_129807686_+ | intronic |
| ADediting_1448746 | chr9_129807687_+ | intronic |
| ADediting_1448747 | chr9_129807695_+ | intronic |
| ADediting_1448748 | chr9_129807696_+ | intronic |
| ADediting_1448749 | chr9_129807699_+ | intronic |
| ADediting_1448750 | chr9_129807725_+ | intronic |
| ADediting_1448751 | chr9_129807735_+ | intronic |
| ADediting_1448752 | chr9_129807752_+ | intronic |
| ADediting_1448753 | chr9_129807753_+ | intronic |
| ADediting_1448754 | chr9_129807791_+ | intronic |
| ADediting_1448755 | chr9_129807801_+ | intronic |
| ADediting_1448756 | chr9_129807803_+ | intronic |
| ADediting_1448757 | chr9_129807828_+ | intronic |
| ADediting_1448758 | chr9_129807916_+ | intronic |
| ADediting_1448759 | chr9_129807934_+ | intronic |
| ADediting_1448760 | chr9_129807943_+ | intronic |
| ADediting_1448761 | chr9_129807962_+ | intronic |
| ADediting_1448762 | chr9_129807994_+ | intronic |
| ADediting_1448763 | chr9_129808038_+ | intronic |
| ADediting_1448764 | chr9_129808236_+ | intronic |
| ADediting_1448765 | chr9_129808242_+ | intronic |
| ADediting_1448766 | chr9_129808243_+ | intronic |
| ADediting_1448767 | chr9_129808264_+ | intronic |
| ADediting_1448768 | chr9_129808273_+ | intronic |
| ADediting_1448769 | chr9_129808283_+ | intronic |
| ADediting_1448770 | chr9_129808288_+ | intronic |
| ADediting_1448771 | chr9_129808297_+ | intronic |
| ADediting_1448772 | chr9_129808320_+ | intronic |
| ADediting_1448773 | chr9_129808321_+ | intronic |
| ADediting_1448774 | chr9_129808322_+ | intronic |
| ADediting_1448775 | chr9_129808333_+ | intronic |
| ADediting_1448776 | chr9_129808336_+ | intronic |
| ADediting_1448777 | chr9_129808337_+ | intronic |
| ADediting_1448778 | chr9_129808351_+ | intronic |
| ADediting_1448779 | chr9_129808378_+ | intronic |
| ADediting_1448780 | chr9_129808379_+ | intronic |
| ADediting_1448781 | chr9_129808384_+ | intronic |
| ADediting_1448782 | chr9_129808388_+ | intronic |
| ADediting_1448783 | chr9_129808392_+ | intronic |
| ADediting_1448784 | chr9_129808405_+ | intronic |
| ADediting_1448785 | chr9_129808407_+ | intronic |
| ADediting_1448786 | chr9_129808408_+ | intronic |
| ADediting_1448787 | chr9_129808411_+ | intronic |
| ADediting_1448788 | chr9_129808414_+ | intronic |
| ADediting_1448789 | chr9_129808419_+ | intronic |
| ADediting_1448790 | chr9_129808420_+ | intronic |
| ADediting_1448791 | chr9_129808427_+ | intronic |
| ADediting_1448792 | chr9_129808444_+ | intronic |
| ADediting_1448793 | chr9_129808451_+ | intronic |
| ADediting_1448794 | chr9_129808494_+ | intronic |
| ADediting_1448795 | chr9_129808499_+ | intronic |
| ADediting_1448796 | chr9_129808606_+ | intronic |
| ADediting_1448797 | chr9_129808611_+ | intronic |
| ADediting_1448798 | chr9_129808630_+ | intronic |
| ADediting_1448799 | chr9_129808636_+ | intronic |
| ADediting_1448800 | chr9_129808649_+ | intronic |
| ADediting_1448801 | chr9_129808650_+ | intronic |
| ADediting_1448802 | chr9_129808651_+ | intronic |
| ADediting_1448803 | chr9_129808662_+ | intronic |
| ADediting_1448804 | chr9_129808667_+ | intronic |
| ADediting_1448805 | chr9_129808675_+ | intronic |
| ADediting_1448806 | chr9_129808679_+ | intronic |
| ADediting_1448807 | chr9_129808689_+ | intronic |
| ADediting_1448808 | chr9_129808695_+ | intronic |
| ADediting_1448809 | chr9_129808717_+ | intronic |
| ADediting_1448810 | chr9_129808718_+ | intronic |
| ADediting_1448811 | chr9_129808732_+ | intronic |
| ADediting_1448812 | chr9_129808735_+ | intronic |
| ADediting_1448813 | chr9_129808737_+ | intronic |
| ADediting_1448814 | chr9_129808747_+ | intronic |
| ADediting_1448815 | chr9_129808786_+ | intronic |
| ADediting_1448816 | chr9_129808795_+ | intronic |
| ADediting_1448817 | chr9_129808813_+ | intronic |
| ADediting_1448818 | chr9_129808814_+ | intronic |
| ADediting_1448819 | chr9_129808826_+ | intronic |
| ADediting_1448820 | chr9_129808828_+ | intronic |
| ADediting_1448821 | chr9_129808832_+ | intronic |
| ADediting_1448822 | chr9_129809392_+ | exonic |
| ADediting_1448823 | chr9_129809725_+ | UTR3 |
| ADediting_1448824 | chr9_129809734_+ | UTR3 |
| ADediting_1448825 | chr9_129809747_+ | UTR3 |
| ADediting_1448826 | chr9_129809758_+ | UTR3 |
| ADediting_1448827 | chr9_129809766_+ | UTR3 |
| ADediting_1448828 | chr9_129809767_+ | UTR3 |
| ADediting_1448829 | chr9_129809773_+ | UTR3 |
| ADediting_1448830 | chr9_129809774_+ | UTR3 |
| ADediting_1448831 | chr9_129809784_+ | UTR3 |
| ADediting_1448832 | chr9_129809819_+ | UTR3 |
| ADediting_1448833 | chr9_129809831_+ | UTR3 |
| ADediting_1592698 | chr9_129804677_+ | intronic |
| ADediting_1592699 | chr9_129805175_+ | intronic |
| ADediting_1592700 | chr9_129805307_+ | intronic |
| ADediting_1592701 | chr9_129806662_+ | intronic |
| ADediting_1592702 | chr9_129806712_+ | intronic |
| ADediting_1592703 | chr9_129806813_+ | intronic |
| ADediting_1592704 | chr9_129808039_+ | intronic |
| ADediting_1592705 | chr9_129808265_+ | intronic |
| ADediting_1592706 | chr9_129808440_+ | intronic |
| ADediting_1592707 | chr9_129808752_+ | intronic |
| ADediting_1592708 | chr9_129808774_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1448703 | chr9_129804623_+ | SINE | Alu | Name=AluSz |
| ADediting_1448704 | chr9_129804646_+ | SINE | Alu | Name=AluSz |
| ADediting_1448705 | chr9_129804651_+ | SINE | Alu | Name=AluSz |
| ADediting_1448706 | chr9_129804665_+ | SINE | Alu | Name=AluSz |
| ADediting_1448707 | chr9_129804685_+ | SINE | Alu | Name=AluSz |
| ADediting_1448708 | chr9_129804741_+ | SINE | Alu | Name=AluSz |
| ADediting_1448709 | chr9_129804768_+ | SINE | Alu | Name=AluSz |
| ADediting_1448710 | chr9_129804794_+ | SINE | Alu | Name=AluSz |
| ADediting_1448711 | chr9_129804827_+ | SINE | Alu | Name=AluSz |
| ADediting_1448712 | chr9_129804922_+ | SINE | Alu | Name=AluY |
| ADediting_1448713 | chr9_129804927_+ | SINE | Alu | Name=AluY |
| ADediting_1448714 | chr9_129804991_+ | SINE | Alu | Name=AluY |
| ADediting_1448715 | chr9_129805181_+ | SINE | Alu | Name=AluSx |
| ADediting_1448716 | chr9_129805221_+ | SINE | Alu | Name=AluSx |
| ADediting_1448717 | chr9_129805334_+ | SINE | Alu | Name=AluSx |
| ADediting_1448718 | chr9_129805404_+ | SINE | Alu | Name=AluSx |
| ADediting_1448719 | chr9_129805407_+ | SINE | Alu | Name=AluSx |
| ADediting_1448720 | chr9_129805430_+ | SINE | Alu | Name=AluSx |
| ADediting_1448721 | chr9_129806108_+ | SINE | Alu | Name=AluJr |
| ADediting_1448722 | chr9_129806667_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448723 | chr9_129806701_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448724 | chr9_129806715_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448725 | chr9_129806716_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448726 | chr9_129806717_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448727 | chr9_129806764_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448728 | chr9_129806774_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448729 | chr9_129806817_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448730 | chr9_129806840_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448731 | chr9_129806848_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448732 | chr9_129807575_+ | SINE | Alu | Name=AluY |
| ADediting_1448733 | chr9_129807589_+ | SINE | Alu | Name=AluY |
| ADediting_1448734 | chr9_129807591_+ | SINE | Alu | Name=AluY |
| ADediting_1448735 | chr9_129807597_+ | SINE | Alu | Name=AluY |
| ADediting_1448736 | chr9_129807598_+ | SINE | Alu | Name=AluY |
| ADediting_1448737 | chr9_129807619_+ | SINE | Alu | Name=AluY |
| ADediting_1448738 | chr9_129807660_+ | SINE | Alu | Name=AluY |
| ADediting_1448739 | chr9_129807662_+ | SINE | Alu | Name=AluY |
| ADediting_1448740 | chr9_129807669_+ | SINE | Alu | Name=AluY |
| ADediting_1448741 | chr9_129807670_+ | SINE | Alu | Name=AluY |
| ADediting_1448742 | chr9_129807681_+ | SINE | Alu | Name=AluY |
| ADediting_1448743 | chr9_129807684_+ | SINE | Alu | Name=AluY |
| ADediting_1448744 | chr9_129807685_+ | SINE | Alu | Name=AluY |
| ADediting_1448745 | chr9_129807686_+ | SINE | Alu | Name=AluY |
| ADediting_1448746 | chr9_129807687_+ | SINE | Alu | Name=AluY |
| ADediting_1448747 | chr9_129807695_+ | SINE | Alu | Name=AluY |
| ADediting_1448748 | chr9_129807696_+ | SINE | Alu | Name=AluY |
| ADediting_1448749 | chr9_129807699_+ | SINE | Alu | Name=AluY |
| ADediting_1448750 | chr9_129807725_+ | SINE | Alu | Name=AluY |
| ADediting_1448751 | chr9_129807735_+ | SINE | Alu | Name=AluY |
| ADediting_1448752 | chr9_129807752_+ | SINE | Alu | Name=AluY |
| ADediting_1448753 | chr9_129807753_+ | SINE | Alu | Name=AluY |
| ADediting_1448754 | chr9_129807791_+ | SINE | Alu | Name=AluY |
| ADediting_1448755 | chr9_129807801_+ | SINE | Alu | Name=AluY |
| ADediting_1448756 | chr9_129807803_+ | SINE | Alu | Name=AluY |
| ADediting_1448757 | chr9_129807828_+ | SINE | Alu | Name=AluY |
| ADediting_1448758 | chr9_129807916_+ | SINE | Alu | Name=AluJo |
| ADediting_1448759 | chr9_129807934_+ | SINE | Alu | Name=AluJo |
| ADediting_1448760 | chr9_129807943_+ | SINE | Alu | Name=AluJo |
| ADediting_1448761 | chr9_129807962_+ | SINE | Alu | Name=AluJo |
| ADediting_1448762 | chr9_129807994_+ | SINE | Alu | Name=AluJo |
| ADediting_1448763 | chr9_129808038_+ | SINE | Alu | Name=AluJo |
| ADediting_1448764 | chr9_129808236_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448765 | chr9_129808242_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448766 | chr9_129808243_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448767 | chr9_129808264_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448768 | chr9_129808273_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448769 | chr9_129808283_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448770 | chr9_129808288_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448771 | chr9_129808297_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448772 | chr9_129808320_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448773 | chr9_129808321_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448774 | chr9_129808322_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448775 | chr9_129808333_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448776 | chr9_129808336_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448777 | chr9_129808337_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448778 | chr9_129808351_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448779 | chr9_129808378_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448780 | chr9_129808379_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448781 | chr9_129808384_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448782 | chr9_129808388_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448783 | chr9_129808392_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448784 | chr9_129808405_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448785 | chr9_129808407_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448786 | chr9_129808408_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448787 | chr9_129808411_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448788 | chr9_129808414_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448789 | chr9_129808419_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448790 | chr9_129808420_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448791 | chr9_129808427_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448792 | chr9_129808444_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448793 | chr9_129808451_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448794 | chr9_129808494_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448795 | chr9_129808499_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1448796 | chr9_129808606_+ | SINE | Alu | Name=AluSp |
| ADediting_1448797 | chr9_129808611_+ | SINE | Alu | Name=AluSp |
| ADediting_1448798 | chr9_129808630_+ | SINE | Alu | Name=AluSp |
| ADediting_1448799 | chr9_129808636_+ | SINE | Alu | Name=AluSp |
| ADediting_1448800 | chr9_129808649_+ | SINE | Alu | Name=AluSp |
| ADediting_1448801 | chr9_129808650_+ | SINE | Alu | Name=AluSp |
| ADediting_1448802 | chr9_129808651_+ | SINE | Alu | Name=AluSp |
| ADediting_1448803 | chr9_129808662_+ | SINE | Alu | Name=AluSp |
| ADediting_1448804 | chr9_129808667_+ | SINE | Alu | Name=AluSp |
| ADediting_1448805 | chr9_129808675_+ | SINE | Alu | Name=AluSp |
| ADediting_1448806 | chr9_129808679_+ | SINE | Alu | Name=AluSp |
| ADediting_1448807 | chr9_129808689_+ | SINE | Alu | Name=AluSp |
| ADediting_1448808 | chr9_129808695_+ | SINE | Alu | Name=AluSp |
| ADediting_1448809 | chr9_129808717_+ | SINE | Alu | Name=AluSp |
| ADediting_1448810 | chr9_129808718_+ | SINE | Alu | Name=AluSp |
| ADediting_1448811 | chr9_129808732_+ | SINE | Alu | Name=AluSp |
| ADediting_1448812 | chr9_129808735_+ | SINE | Alu | Name=AluSp |
| ADediting_1448813 | chr9_129808737_+ | SINE | Alu | Name=AluSp |
| ADediting_1448814 | chr9_129808747_+ | SINE | Alu | Name=AluSp |
| ADediting_1448815 | chr9_129808786_+ | SINE | Alu | Name=AluSp |
| ADediting_1448816 | chr9_129808795_+ | SINE | Alu | Name=AluSp |
| ADediting_1448817 | chr9_129808813_+ | SINE | Alu | Name=AluSp |
| ADediting_1448818 | chr9_129808814_+ | SINE | Alu | Name=AluSp |
| ADediting_1448819 | chr9_129808826_+ | SINE | Alu | Name=AluSp |
| ADediting_1448820 | chr9_129808828_+ | SINE | Alu | Name=AluSp |
| ADediting_1448821 | chr9_129808832_+ | SINE | Alu | Name=AluSp |
| ADediting_1448823 | chr9_129809725_+ | SINE | Alu | Name=AluSx |
| ADediting_1448824 | chr9_129809734_+ | SINE | Alu | Name=AluSx |
| ADediting_1448825 | chr9_129809747_+ | SINE | Alu | Name=AluSx |
| ADediting_1448826 | chr9_129809758_+ | SINE | Alu | Name=AluSx |
| ADediting_1448827 | chr9_129809766_+ | SINE | Alu | Name=AluSx |
| ADediting_1448828 | chr9_129809767_+ | SINE | Alu | Name=AluSx |
| ADediting_1448829 | chr9_129809773_+ | SINE | Alu | Name=AluSx |
| ADediting_1448830 | chr9_129809774_+ | SINE | Alu | Name=AluSx |
| ADediting_1448831 | chr9_129809784_+ | SINE | Alu | Name=AluSx |
| ADediting_1448832 | chr9_129809819_+ | SINE | Alu | Name=AluSx |
| ADediting_1448833 | chr9_129809831_+ | SINE | Alu | Name=AluSx |
| ADediting_1592698 | chr9_129804677_+ | SINE | Alu | Name=AluSz |
| ADediting_1592699 | chr9_129805175_+ | SINE | Alu | Name=AluSx |
| ADediting_1592700 | chr9_129805307_+ | SINE | Alu | Name=AluSx |
| ADediting_1592701 | chr9_129806662_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1592702 | chr9_129806712_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1592703 | chr9_129806813_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1592704 | chr9_129808039_+ | SINE | Alu | Name=AluJo |
| ADediting_1592705 | chr9_129808265_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1592706 | chr9_129808440_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1592707 | chr9_129808752_+ | SINE | Alu | Name=AluSp |
| ADediting_1592708 | chr9_129808774_+ | SINE | Alu | Name=AluSp |
Top |
RNA A-to-I editing events in the alternative splicing sites for TOR1B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| A5SS | ADediting_1448739 | chr9_129807662_+ | 129807662:129807670 | 5ss | 3e | ATGGTGAAA | 0.56 | GTGGTGAAA | -1.77 |
| A5SS | ADediting_1448740 | chr9_129807669_+ | 129807662:129807670 | 5ss | 5i | ATGGTGAAA | 0.56 | ATGGTGAGA | 7.23 |
| A5SS | ADediting_1448741 | chr9_129807670_+ | 129807662:129807670 | 5ss | 6i | ATGGTGAAA | 0.56 | ATGGTGAAG | 1.69 |
| ES | ADediting_1448740 | chr9_129807669_+ | 129807662:129807670 | 5ss | 5i | ATGGTGAAA | 0.56 | ATGGTGAGA | 7.23 |
| ES | ADediting_1448741 | chr9_129807670_+ | 129807662:129807670 | 5ss | 6i | ATGGTGAAA | 0.56 | ATGGTGAAG | 1.69 |
| ME2 | ADediting_1448739 | chr9_129807662_+ | 129807662:129807670 | 5ss | 3e | ATGGTGAAA | 0.56 | GTGGTGAAA | -1.77 |
| ME2 | ADediting_1448740 | chr9_129807669_+ | 129807662:129807670 | 5ss | 5i | ATGGTGAAA | 0.56 | ATGGTGAGA | 7.23 |
| ME2 | ADediting_1448740 | chr9_129807669_+ | 129807662:129807670 | 5ss | 5i | ATGGTGAAA | 0.56 | ATGGTGAGA | 7.23 |
| ME2 | ADediting_1448741 | chr9_129807670_+ | 129807662:129807670 | 5ss | 6i | ATGGTGAAA | 0.56 | ATGGTGAAG | 1.69 |
| ME2 | ADediting_1448741 | chr9_129807670_+ | 129807662:129807670 | 5ss | 6i | ATGGTGAAA | 0.56 | ATGGTGAAG | 1.69 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for TOR1B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TOR1B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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Top |
The effects of the RNA editing to the miRNA binding sites for TOR1B |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1448823 | chr9_129809725_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-5193 | chr9 | 129809722 | 129809728 | 7mer-m8 | 129809708 | 129809729 | 145 | -16.05 |
| ADediting_1448823 | chr9_129809725_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-7111-3p | chr9 | 129809720 | 129809726 | 7mer-m8 | 129809706 | 129809727 | 140 | -12.61 |
| ADediting_1448825 | chr9_129809747_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-3116 | chr9 | 129809742 | 129809748 | 7mer-m8 | 129809727 | 129809749 | 153 | -23.14 |
| ADediting_1448825 | chr9_129809747_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-6849-3p | chr9 | 129809745 | 129809752 | 8mer-1a | 129809731 | 129809752 | 148 | -16.48 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-1288-3p | chr9 | 129809763 | 129809769 | 7mer-m8 | 129809752 | 129809770 | 148 | -19.81 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-3130-3p | chr9 | 129809760 | 129809766 | 7mer-m8 | 129809746 | 129809767 | 146 | -18.52 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-3169 | chr9 | 129809764 | 129809770 | 7mer-m8 | 129809749 | 129809771 | 157 | -21.63 |
| ADediting_1448829 | chr9_129809773_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4785 | chr9 | 129809771 | 129809777 | 7mer-1a | 129809757 | 129809777 | 143 | -21.35 |
| ADediting_1448830 | chr9_129809774_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-3160-3p | chr9 | 129809770 | 129809777 | 8mer-1a | 129809756 | 129809777 | 148 | -17.89 |
| ADediting_1448830 | chr9_129809774_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-7160-5p | chr9 | 129809768 | 129809774 | 7mer-m8 | 129809755 | 129809775 | 142 | -18.43 |
| ADediting_1448831 | chr9_129809784_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-17-3p | chr9 | 129809777 | 129809783 | 7mer-m8 | 129809763 | 129809784 | 150 | -18.82 |
| ADediting_1448831 | chr9_129809784_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-485-5p | chr9 | 129809781 | 129809787 | 7mer-m8 | 129809766 | 129809788 | 155 | -17.87 |
| ADediting_1448831 | chr9_129809784_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-6884-5p | chr9 | 129809781 | 129809787 | 7mer-m8 | 129809765 | 129809788 | 153 | -24.61 |
| ADediting_1448832 | chr9_129809819_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-6089 | chr9 | 129809817 | 129809823 | 7mer-m8 | 129809801 | 129809824 | 156 | -33.47 |
| ADediting_1448833 | chr9_129809831_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4691-3p | chr9 | 129809828 | 129809834 | 7mer-m8 | 129809808 | 129809835 | 150 | -28 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1448823 | chr9_129809725_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-877-3p | chr9 | 129809722 | 129809728 | 7mer-m8 | 129809709 | 129809729 | 150 | -16.01 |
| ADediting_1448825 | chr9_129809747_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4453 | chr9 | 129809743 | 129809749 | 7mer-m8 | 129809734 | 129809750 | 142 | -16.43 |
| ADediting_1448826 | chr9_129809758_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-324-3p | chr9 | 129809755 | 129809761 | 7mer-m8 | 129809738 | 129809762 | 149 | -22 |
| ADediting_1448826 | chr9_129809758_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-7703 | chr9 | 129809751 | 129809757 | 7mer-m8 | 129809736 | 129809758 | 154 | -19.99 |
| ADediting_1448827 | chr9_129809766_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-25-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809744 | 129809768 | 150 | -17.08 |
| ADediting_1448827 | chr9_129809766_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-32-5p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 148 | -14.37 |
| ADediting_1448827 | chr9_129809766_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-363-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 149 | -15.79 |
| ADediting_1448827 | chr9_129809766_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-367-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809747 | 129809768 | 153 | -17.21 |
| ADediting_1448827 | chr9_129809766_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-92a-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 149 | -19.54 |
| ADediting_1448827 | chr9_129809766_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-92b-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 147 | -18.43 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-25-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809744 | 129809768 | 150 | -17.08 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-32-5p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 148 | -14.37 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-363-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 149 | -15.79 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-367-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809747 | 129809768 | 153 | -17.21 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-92a-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 149 | -19.54 |
| ADediting_1448828 | chr9_129809767_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-92b-3p | chr9 | 129809761 | 129809767 | 7mer-m8 | 129809743 | 129809768 | 147 | -18.43 |
| ADediting_1448829 | chr9_129809773_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-219a-1-3p | chr9 | 129809770 | 129809777 | 8mer-1a | 129809757 | 129809777 | 149 | -15.12 |
| ADediting_1448830 | chr9_129809774_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-219a-1-3p | chr9 | 129809770 | 129809777 | 8mer-1a | 129809757 | 129809777 | 149 | -15.12 |
| ADediting_1448831 | chr9_129809784_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-377-5p | chr9 | 129809781 | 129809787 | 7mer-m8 | 129809766 | 129809788 | 153 | -16.58 |
| ADediting_1448831 | chr9_129809784_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-6086 | chr9 | 129809781 | 129809787 | 7mer-m8 | 129809769 | 129809788 | 143 | -21.55 |
| ADediting_1448831 | chr9_129809784_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-6516-5p | chr9 | 129809777 | 129809783 | 7mer-m8 | 129809767 | 129809784 | 146 | -13.52 |
| ADediting_1448832 | chr9_129809819_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-3929 | chr9 | 129809816 | 129809822 | 7mer-m8 | 129809801 | 129809823 | 153 | -23.19 |
| ADediting_1448832 | chr9_129809819_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4478 | chr9 | 129809816 | 129809822 | 7mer-m8 | 129809805 | 129809823 | 153 | -25.39 |
| ADediting_1448832 | chr9_129809819_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4649-3p | chr9 | 129809813 | 129809819 | 7mer-m8 | 129809800 | 129809820 | 147 | -14.43 |
| ADediting_1448832 | chr9_129809819_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-6884-5p | chr9 | 129809817 | 129809823 | 7mer-m8 | 129809801 | 129809824 | 153 | -19.75 |
| ADediting_1448832 | chr9_129809819_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-7160-5p | chr9 | 129809814 | 129809820 | 7mer-m8 | 129809801 | 129809821 | 146 | -16.61 |
| ADediting_1448833 | chr9_129809831_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-5690 | chr9 | 129809828 | 129809834 | 7mer-m8 | 129809815 | 129809835 | 145 | -16.75 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-589-3p | chr9 | 129810202 | 129810208 | 7mer-m8 | 129810186 | 129810209 | 158 | -15.37 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-589-5p | chr9 | 129810591 | 129810598 | 8mer-1a | 129810576 | 129810598 | 153 | -22.64 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-151a-3p | chr9 | 129809943 | 129809949 | 7mer-m8 | 129809929 | 129809950 | 153 | -23.98 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4477b | chr9 | 129809767 | 129809773 | 7mer-m8 | 129809754 | 129809774 | 146 | -12.53 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4477b | chr9 | 129811169 | 129811176 | 8mer-1a | 129811155 | 129811176 | 153 | -12.25 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-556-3p | chr9 | 129810051 | 129810057 | 7mer-m8 | 129810037 | 129810058 | 140 | -10.82 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-556-3p | chr9 | 129811256 | 129811263 | 8mer-1a | 129811244 | 129811263 | 143 | -8.88 |
| ADediting_496066 | chr15_66496985_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-4512 | chr9 | 129810399 | 129810405 | 7mer-m8 | 129810385 | 129810406 | 154 | -20.81 |
| ADediting_496066 | chr15_66496985_- | ENSG00000136816.16 | ENST00000427860.1 | TOR1B-202 | hsa-miR-4512 | chr9 | 129810399 | 129810405 | 7mer-m8 | 129810385 | 129810406 | 154 | -20.81 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-589-3p | chr9 | 129810682 | 129810688 | 7mer-m8 | 129810666 | 129810689 | 149 | -18.25 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-151a-3p | chr9 | 129810887 | 129810894 | 8mer-1a | 129810874 | 129810894 | 155 | -17.45 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-337-3p | chr9 | 129810747 | 129810753 | 7mer-m8 | 129810735 | 129810754 | 145 | -11.19 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-556-3p | chr9 | 129810851 | 129810857 | 7mer-m8 | 129810837 | 129810858 | 155 | -9.02 |
| ADediting_291761 | chr11_93733708_- | ENSG00000136816.16 | ENST00000259339.7 | TOR1B-201 | hsa-miR-1304-3p | chr9 | 129811250 | 129811256 | 7mer-m8 | 129811236 | 129811257 | 151 | -16.71 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for TOR1B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000259339.7 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1448822 | ENST00000259339.7 | chr9_129809392_+ | 849 | -941.20 | -938.30 | -951.30 |
| ADediting_1448823 | ENST00000259339.7 | chr9_129809725_+ | 1182 | -939.50 | -938.30 | -951.30 |
| ADediting_1448824 | ENST00000259339.7 | chr9_129809734_+ | 1191 | -941.90 | -938.30 | -951.30 |
| ADediting_1448825 | ENST00000259339.7 | chr9_129809747_+ | 1204 | -940.10 | -938.30 | -951.30 |
| ADediting_1448826 | ENST00000259339.7 | chr9_129809758_+ | 1215 | -940.70 | -938.30 | -951.30 |
| ADediting_1448827 | ENST00000259339.7 | chr9_129809766_+ | 1223 | -939.30 | -938.30 | -951.30 |
| ADediting_1448828 | ENST00000259339.7 | chr9_129809767_+ | 1224 | -939.80 | -938.30 | -951.30 |
| ADediting_1448829 | ENST00000259339.7 | chr9_129809773_+ | 1230 | -939.60 | -938.30 | -951.30 |
| ADediting_1448830 | ENST00000259339.7 | chr9_129809774_+ | 1231 | -939.10 | -938.30 | -951.30 |
| ADediting_1448831 | ENST00000259339.7 | chr9_129809784_+ | 1241 | -939.30 | -938.30 | -951.30 |
| ADediting_1448832 | ENST00000259339.7 | chr9_129809819_+ | 1276 | -939.30 | -938.30 | -951.30 |
| ADediting_1448833 | ENST00000259339.7 | chr9_129809831_+ | 1288 | -939.60 | -938.30 | -951.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for TOR1B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1448710 | chr9_129804794_+ | 0.00207573602055591 | 0.249512215136811 | 3.00983214376032e-07 | 0.40371197813383 | 0.0539056930045647 | 0.157720235380432 |
| CER | ADediting_1448722 | chr9_129806667_+ | 0.0232597185137373 | 0.1852179760919 | 5.02641554974917e-05 | 0.32473928231821 | 0.0296571857778961 | 0.177629977997696 |
| CER | ADediting_1448723 | chr9_129806701_+ | 0.0316435120727729 | 0.175559310911589 | 2.27606450694711e-05 | 0.338431506704566 | 0.0633845488348447 | 0.151970961049341 |
| CER | ADediting_1448728 | chr9_129806774_+ | 0.00188673785539353 | 0.251733708379232 | 4.13497463068512e-05 | 0.328174182569534 | 0.917287577007088 | 0.00855077672929099 |
| CER | ADediting_1448729 | chr9_129806817_+ | 0.0262112672798348 | 0.181520511293608 | 3.48185183763751e-07 | 0.401728520854129 | 0.366580225648174 | 0.0742405395499764 |
| CER | ADediting_1448731 | chr9_129806848_+ | 0.00819632019662234 | 0.215137264683653 | 1.00982085527481e-08 | 0.446645053449205 | 0.0918331715559618 | 0.138140367305723 |
| CER | ADediting_1448734 | chr9_129807591_+ | 4.06486419315964e-05 | 0.328473114122548 | 2.58690415838397e-06 | 0.373021576635713 | 0.0170928677428851 | 0.194474363144604 |
| CER | ADediting_1448741 | chr9_129807670_+ | 4.26669956951384e-07 | 0.398939199701651 | 2.41545974660634e-06 | 0.374049499904355 | 0.0712055043751686 | 0.147735884554992 |
| CER | ADediting_1448742 | chr9_129807681_+ | 0.000134630502361976 | 0.306741716353786 | 9.6912304886125e-06 | 0.352499428801692 | 0.278538164393149 | 0.0890453289650763 |
| CER | ADediting_1448744 | chr9_129807685_+ | 1.33607160243636e-09 | 0.469655959385528 | 9.85309202470735e-13 | 0.540079343737809 | 0.0671735728515589 | 0.149869031125607 |
| CER | ADediting_1448748 | chr9_129807696_+ | 0.000274174535492754 | 0.292990754280989 | 3.93391739161599e-05 | 0.329044640218735 | 0.0411406338295639 | 0.166962033484195 |
| CER | ADediting_1448749 | chr9_129807699_+ | 2.52244148109168e-07 | 0.406100079750533 | 3.10078971276605e-09 | 0.460283758204862 | 0.00460347608831235 | 0.230168797281615 |
| CER | ADediting_1448750 | chr9_129807725_+ | 8.89442887632662e-07 | 0.388641160646657 | 9.53278688544724e-09 | 0.447324741343195 | 0.00570984701087838 | 0.224666155372539 |
| CER | ADediting_1448752 | chr9_129807752_+ | 1.0468764595232e-06 | 0.386308428723215 | 1.64598015895357e-06 | 0.37973521721607 | 0.0254634765572257 | 0.182422133951089 |
| CER | ADediting_1448753 | chr9_129807753_+ | 1.87137083144853e-06 | 0.377844729325715 | 1.4304324699198e-05 | 0.346168091594634 | 0.16693923018838 | 0.113432801934842 |
| CER | ADediting_1448756 | chr9_129807803_+ | 6.45416841313463e-06 | 0.358967817909176 | 1.17605123597188e-05 | 0.349369407954424 | 0.282661239131004 | 0.0882882951663925 |
| CER | ADediting_1448759 | chr9_129807934_+ | 0.000847814470626645 | 0.269631649606049 | 9.63650336999689e-05 | 0.312979451728509 | 0.813074534324661 | 0.0194680345410292 |
| CER | ADediting_1448760 | chr9_129807943_+ | 1.25755262325328e-06 | 0.383662252620738 | 2.84455474395027e-09 | 0.461256987143459 | 0.0368683215251115 | 0.170596517791282 |
| CER | ADediting_1448767 | chr9_129808264_+ | 0.000222711139401658 | 0.297081334211164 | 1.44832361948794e-09 | 0.468770061071267 | 0.000730624236687737 | 0.272828988286247 |
| CER | ADediting_1448768 | chr9_129808273_+ | 0.000379375036086328 | 0.286475572302825 | 8.08686106998921e-08 | 0.421048622818888 | 0.000112799357977171 | 0.31005931015209 |
| CER | ADediting_1448770 | chr9_129808288_+ | 0.000810855833648896 | 0.270593687097677 | 8.24399730517183e-06 | 0.355090039206024 | 0.00336075857467025 | 0.237990965879959 |
| CER | ADediting_1448774 | chr9_129808322_+ | 2.98490504507165e-07 | 0.403824820019248 | 5.43807360050129e-11 | 0.502914532862009 | 0.00597970862095188 | 0.223469841069581 |
| TCX | ADediting_1448774 | chr9_129808322_+ | 0.00123412820260085 | 0.261384631932834 | 4.83617961222294e-05 | 0.325421385307739 | 0.533595876039302 | 0.0512241857030968 |
| CER | ADediting_1448775 | chr9_129808333_+ | 0.000211550423020188 | 0.298083650202591 | 5.92136900188175e-08 | 0.425020705812966 | 0.0851092013489406 | 0.141059041165872 |
| CER | ADediting_1448777 | chr9_129808337_+ | 0.00321294047373778 | 0.239089200284644 | 7.47232855738587e-07 | 0.391115217541431 | 0.00394713809219875 | 0.234023930225084 |
| CER | ADediting_1448779 | chr9_129808378_+ | 0.000229779804281877 | 0.296470389468135 | 4.15135934920132e-07 | 0.399316731350799 | 0.379071975432387 | 0.0723306012039728 |
| CER | ADediting_1448783 | chr9_129808392_+ | 0.00171675877660531 | 0.253911773948623 | 2.0349123803984e-05 | 0.340315842759192 | 0.0162417798973922 | 0.195972407534288 |
| CER | ADediting_1448784 | chr9_129808405_+ | 4.64259996515961e-06 | 0.364108666375415 | 1.62878382845722e-06 | 0.379889403702608 | 0.105561083674664 | 0.132672634354043 |
| CER | ADediting_1448786 | chr9_129808408_+ | 0.00145191130502011 | 0.257732324268428 | 5.60049072294007e-06 | 0.361192530358256 | 0.180818762334762 | 0.109854676484943 |
| CER | ADediting_1448787 | chr9_129808411_+ | 0.000246165755243405 | 0.295118712675963 | 4.38352978934316e-06 | 0.364995650766581 | 0.00766488591062395 | 0.216933413654252 |
| CER | ADediting_1448788 | chr9_129808414_+ | 3.9001897974998e-06 | 0.366792236108853 | 6.44046835617695e-05 | 0.320317411826031 | 0.0419666571576313 | 0.16629621091647 |
| CER | ADediting_1448790 | chr9_129808420_+ | 0.00181803607904853 | 0.252591647368892 | 1.01925309087535e-05 | 0.351686930456135 | 0.000405116199709009 | 0.285139379233241 |
| CER | ADediting_1448791 | chr9_129808427_+ | 0.000312481201580922 | 0.290385814766222 | 1.14380982408848e-05 | 0.349821051294961 | 0.0754214960142395 | 0.145607725003516 |
| CER | ADediting_1448796 | chr9_129808606_+ | 1.43423096535571e-07 | 0.413610156792418 | 3.33621625407916e-08 | 0.43220163670264 | 0.0286980129684209 | 0.178672446434319 |
| CER | ADediting_1448797 | chr9_129808611_+ | 6.52067321879818e-06 | 0.358806416070369 | 2.72943820193118e-07 | 0.405036211858082 | 0.0656875680318909 | 0.150681554732118 |
| CER | ADediting_1448798 | chr9_129808630_+ | 2.63985663310404e-09 | 0.462097226331166 | 1.15203547732912e-08 | 0.445085246673514 | 0.395313133376765 | 0.0699037894701545 |
| CER | ADediting_1448799 | chr9_129808636_+ | 0.000105338475298462 | 0.311332067321639 | 1.43461338786375e-06 | 0.381746785230899 | 0.918740234920365 | 0.00840008010291939 |
| CER | ADediting_1448802 | chr9_129808651_+ | 2.06084039767697e-06 | 0.37641619882154 | 7.103026378032e-06 | 0.357456159088842 | 0.0466051718449567 | 0.162748842560216 |
| CER | ADediting_1448803 | chr9_129808662_+ | 4.17147663251401e-08 | 0.429424897897303 | 9.18663891430641e-05 | 0.313860069100782 | 0.947593107219564 | -0.00541203428679068 |
| CER | ADediting_1448804 | chr9_129808667_+ | 2.02862988803365e-08 | 0.438296059269856 | 1.64392389344597e-05 | 0.343872405045339 | 0.39641266002625 | -0.0697416802214869 |
| CER | ADediting_1448805 | chr9_129808675_+ | 8.83592791246749e-06 | 0.35398215397579 | 2.47630477528865e-06 | 0.37367697891226 | 0.107037631618366 | 0.132118576781708 |
| CER | ADediting_1448806 | chr9_129808679_+ | 1.06331737248494e-05 | 0.351003356974869 | 8.24686188933074e-08 | 0.420797216941364 | 0.15125775698339 | 0.117752661153908 |
| CER | ADediting_1448807 | chr9_129808689_+ | 7.60804471475188e-06 | 0.356367526280268 | 2.27019623644713e-06 | 0.374976233675962 | 0.0103321429983171 | 0.208824528045619 |
| CER | ADediting_1448810 | chr9_129808718_+ | 0.00274379750804544 | 0.242905225656839 | 0.00330296517166912 | 0.238415063953341 | 1.10696378038891e-06 | 0.385505431748662 |
| CER | ADediting_1448811 | chr9_129808732_+ | 5.77490464320361e-09 | 0.453175070005408 | 1.24260043487098e-12 | 0.538048442756575 | 0.0235448993992394 | 0.184843683699052 |
| TCX | ADediting_1448811 | chr9_129808732_+ | 0.0120135051078044 | 0.20462033780057 | 8.6343351939019e-06 | 0.354351364247628 | 0.504634206678729 | -0.0548960843023539 |
| CER | ADediting_1448812 | chr9_129808735_+ | 8.78290343811672e-06 | 0.354078488139323 | 2.62177455604503e-08 | 0.435168854273151 | 0.0209571442238943 | 0.188393859633495 |
| CER | ADediting_1448814 | chr9_129808747_+ | 1.75222416930323e-06 | 0.378815284237677 | 2.49915982829411e-07 | 0.406224917671891 | 0.0628218803119516 | 0.152291797119671 |
| TCX | ADediting_1448814 | chr9_129808747_+ | 0.000565152540246983 | 0.278259404433983 | 0.000153693154509386 | 0.304232539549931 | 0.506953988502507 | 0.0545980435397134 |
| CER | ADediting_1448816 | chr9_129808795_+ | 4.02976355414563e-05 | 0.328624597293047 | 4.01548579072271e-09 | 0.457348491882614 | 6.49122025148413e-05 | 0.320176272207631 |
| CER | ADediting_1448818 | chr9_129808814_+ | 0.000159508296516109 | 0.30352477641874 | 0.000214194346710605 | 0.297841839699812 | 0.002652521541994 | 0.243715625738672 |
| CER | ADediting_1448819 | chr9_129808826_+ | 0.000508669418456209 | 0.280454511824383 | 7.95753567989947e-06 | 0.355653500244717 | 0.0103457125691432 | 0.208788258343367 |
| CER | ADediting_1448822 | chr9_129809392_+ | 0.0458114040582914 | 0.163334329769312 | 1.51621993281849e-09 | 0.468265839919728 | 3.31386984708906e-05 | 0.33201994513868 |
| CER | ADediting_1448825 | chr9_129809747_+ | 0.0130296953392756 | 0.202323874336054 | 9.33990301941092e-07 | 0.387943516171879 | 0.026965215414544 | 0.180633473332359 |
| CER | ADediting_1448829 | chr9_129809773_+ | 0.0113348961110344 | 0.206250778679417 | 3.23727881817956e-06 | 0.369634855139505 | 0.443279691664072 | 0.0630632866119553 |
| CER | ADediting_1448830 | chr9_129809774_+ | 0.0696211285589361 | 0.148562110477171 | 9.06947802093292e-05 | 0.314096027806771 | 0.316020482350744 | 0.0824176845226173 |
| CER | ADediting_1448831 | chr9_129809784_+ | 0.0596124645129666 | 0.154168188065728 | 0.00017810008183125 | 0.301412990471154 | 0.029412693800444 | 0.177892943844105 |
| CER | ADediting_1592707 | chr9_129808752_+ | 0.00220143352803919 | 0.248134379463922 | 1.11741222010063e-05 | 0.350199880536348 | 0.897643613071876 | 0.0105916079362389 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 5.2011836873556e-56 | 0.744606021264414 | 3.86402231695789e-55 | 0.740684359535664 | 1.10019725307518e-11 | 0.373276156700568 |
| AC | 1.01102664129234e-75 | 0.863609082385007 | 7.06376658193436e-45 | 0.74151874942299 | 5.09575703298372e-21 | 0.548271161726426 |
| PCC | 8.00803599019875e-44 | 0.800141167282417 | 1.01804563425644e-37 | 0.763370473054194 | 7.7874747076805e-07 | 0.34850675772379 |
| CER | 1.99845553049102e-44 | 0.856847492215073 | 1.91598174974229e-38 | 0.824604127880083 | 0.004226898024853 | 0.232315203176805 |
| TCX | 3.38737975352813e-33 | 0.789573390587138 | 2.31252824393995e-15 | 0.588727973258458 | 0.000548727030758718 | 0.278876085402761 |
| FP | 1.04337010218475e-30 | 0.728350825158442 | 2.25487428340369e-36 | 0.771311667022048 | 1.73933441036736e-05 | 0.315935914436872 |
| IFG | 7.08175913879697e-05 | 0.709745305051159 | 1.37203416039943e-05 | 0.753517410795547 | 0.247233533181401 | 0.240311163852499 |
| PG | 1.49134649785693e-32 | 0.732502265650249 | 4.66500611891938e-26 | 0.674705689009443 | 0.150016312848737 | 0.1059642893496 |
| STG | 7.14981498867263e-18 | 0.772882992775991 | 6.20774028775906e-12 | 0.663287687052251 | 0.12022183630539 | 0.170849048730755 |
Top |
Relation with AD stages for TOR1B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1448731 | chr9_129806848_+ | 0.000685203396735008 | 0.321736886539551 |
| CER | ADediting_1448744 | chr9_129807685_+ | 0.00139621157281506 | 0.303717450745365 |
| CER | ADediting_1448749 | chr9_129807699_+ | 0.000205378649780073 | 0.349926257909795 |
| CER | ADediting_1448750 | chr9_129807725_+ | 0.000226563272783643 | 0.347726534865654 |
| CER | ADediting_1448760 | chr9_129807943_+ | 0.000154740275020453 | 0.356181558116068 |
| CER | ADediting_1448767 | chr9_129808264_+ | 0.000237975885673689 | 0.346619239617486 |
| CER | ADediting_1448783 | chr9_129808392_+ | 7.02004260079697e-05 | 0.372992419757099 |
| CER | ADediting_1448786 | chr9_129808408_+ | 0.00141221829343553 | 0.303419534565961 |
| CER | ADediting_1448787 | chr9_129808411_+ | 7.11326006867798e-05 | 0.372719317008307 |
| CER | ADediting_1448796 | chr9_129808606_+ | 0.000621228778691377 | 0.324133105196838 |
| CER | ADediting_1448799 | chr9_129808636_+ | 0.00123483606233242 | 0.306907995960273 |
| CER | ADediting_1448816 | chr9_129808795_+ | 0.000523725595781966 | 0.328260911780851 |
| CER | ADediting_1448822 | chr9_129809392_+ | 9.4283287419657e-06 | 0.411971208580449 |
| CER | ADediting_1448825 | chr9_129809747_+ | 1.81343783527352e-06 | 0.440694083102847 |
| CER | ADediting_1448826 | chr9_129809758_+ | 4.67826458547002e-05 | 0.381278052770951 |
| CER | ADediting_1448830 | chr9_129809774_+ | 0.000814476474820241 | 0.317463311488027 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.7926617109671e-05 | 0.391499502759375 |
| TCX | 2.57346692939577e-06 | 0.438562864139762 |
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RelatedDrugs for TOR1B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TOR1B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| TOR1B | C0021400 | Influenza | 1 | CTD_human |
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