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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for NBPF14 |
 Gene summary |
| Gene information | Gene symbol | NBPF14 | Gene ID | 25832 |
| Gene name | NBPF member 14 | |
| Synonyms | DJ328E19.C1.1|NBPF | |
| Cytomap | 1q21.2 | |
| Type of gene | protein-coding | |
| Description | neuroblastoma breakpoint family member 14AE5 | |
| Modification date | 20200313 | |
| UniProtAcc | Q5TI25, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for NBPF14 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_16484(148531980, -), ADediting_16486(148532133, -), ADediting_16487(148532136, -), ADediting_16488(148532139, -), ADediting_16489(148532140, -), ADediting_16490(148532141, -), ADediting_16491(148532142, -), ADediting_16492(148532143, -), ADediting_16493(148532145, -), ADediting_16494(148532163, -), ADediting_16495(148532191, -), |
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RNA editing positional annotations for NBPF14 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_16484 | chr1_148531980_- | UTR3 |
| ADediting_16486 | chr1_148532133_- | UTR3 |
| ADediting_16487 | chr1_148532136_- | UTR3 |
| ADediting_16488 | chr1_148532139_- | UTR3 |
| ADediting_16489 | chr1_148532140_- | UTR3 |
| ADediting_16490 | chr1_148532141_- | UTR3 |
| ADediting_16491 | chr1_148532142_- | UTR3 |
| ADediting_16492 | chr1_148532143_- | UTR3 |
| ADediting_16493 | chr1_148532145_- | UTR3 |
| ADediting_16494 | chr1_148532163_- | UTR3 |
| ADediting_16495 | chr1_148532191_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_16484 | chr1_148531980_- | LINE | L1 | Name=L1MC4 |
| ADediting_16486 | chr1_148532133_- | LINE | L1 | Name=L1MC4 |
| ADediting_16487 | chr1_148532136_- | LINE | L1 | Name=L1MC4 |
| ADediting_16488 | chr1_148532139_- | LINE | L1 | Name=L1MC4 |
| ADediting_16489 | chr1_148532140_- | LINE | L1 | Name=L1MC4 |
| ADediting_16490 | chr1_148532141_- | LINE | L1 | Name=L1MC4 |
| ADediting_16491 | chr1_148532142_- | LINE | L1 | Name=L1MC4 |
| ADediting_16492 | chr1_148532143_- | LINE | L1 | Name=L1MC4 |
| ADediting_16493 | chr1_148532145_- | LINE | L1 | Name=L1MC4 |
| ADediting_16494 | chr1_148532163_- | LINE | L1 | Name=L1MC4 |
| ADediting_16495 | chr1_148532191_- | LINE | L1 | Name=L1MC4 |
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RNA A-to-I editing events in the alternative splicing sites for NBPF14 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NBPF14 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |