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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for FYN |
 Gene summary |
| Gene information | Gene symbol | FYN | Gene ID | 2534 |
| Gene name | FYN proto-oncogene, Src family tyrosine kinase | |
| Synonyms | SLK|SYN|p59-FYN | |
| Cytomap | 6q21 | |
| Type of gene | protein-coding | |
| Description | tyrosine-protein kinase FynFYN oncogene related to SRC, FGR, YESOKT3-induced calcium influx regulatorc-syn protooncogeneproto-oncogene Synproto-oncogene c-Fynsrc-like kinasesrc/yes-related noveltyrosine kinase p59fyn(T) | |
| Modification date | 20200327 | |
| UniProtAcc | P06241, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| FYN | GO:0050852 | T cell receptor signaling pathway | 7722293 |
Top |
RNA A-to-I events for FYN |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1226543(111665664, -), ADediting_1226544(111665718, -), ADediting_1226545(111665719, -), ADediting_1226546(111665746, -), ADediting_1226547(111665750, -), ADediting_1226548(111665760, -), ADediting_1226549(111665766, -), ADediting_1226550(111665776, -), ADediting_1226551(111665786, -), ADediting_1226552(111665798, -), ADediting_1226553(111665816, -), ADediting_1226554(111665822, -), ADediting_1226555(111665826, -), ADediting_1226556(111665842, -), ADediting_1226557(111665846, -), ADediting_1226558(111665887, -), ADediting_1226559(111665895, -), ADediting_1226560(111665896, -), ADediting_1226561(111666078, -), ADediting_1226562(111666098, -), ADediting_1226563(111666099, -), ADediting_1226564(111666126, -), ADediting_1226565(111666130, -), ADediting_1226566(111666151, -), ADediting_1226567(111666207, -), ADediting_1226568(111666459, -), ADediting_1226569(111666598, -), ADediting_1226570(111666615, -), ADediting_1226571(111666621, -), ADediting_1226572(111666653, -), ADediting_1226573(111666684, -), ADediting_1226574(111666705, -), ADediting_1226575(111666709, -), ADediting_1226576(111666711, -), ADediting_1226577(111666721, -), ADediting_1226578(111666723, -), ADediting_1226579(111666733, -), ADediting_1226580(111666747, -), ADediting_1226581(111666750, -), ADediting_1226582(111666765, -), ADediting_1226583(111666771, -), ADediting_1226584(111666773, -), ADediting_1226585(111666776, -), ADediting_1226586(111666781, -), ADediting_1226587(111666807, -), ADediting_1226588(111666936, -), ADediting_1226589(111667269, -), ADediting_1226590(111667315, -), ADediting_1226591(111667356, -), ADediting_1226592(111667374, -), ADediting_1226593(111667380, -), ADediting_1226594(111667382, -), ADediting_1226595(111667386, -), ADediting_1226596(111667453, -), ADediting_1226597(111667457, -), ADediting_1226598(111667473, -), ADediting_1226599(111667481, -), ADediting_1226600(111667504, -), ADediting_1226601(111669372, -), ADediting_1226602(111669401, -), ADediting_1226603(111670147, -), ADediting_1226604(111698159, -), ADediting_1226605(111698230, -), ADediting_1226606(111698231, -), ADediting_1226607(111698236, -), ADediting_1226608(111698239, -), ADediting_1226609(111698245, -), ADediting_1226610(111698258, -), ADediting_1226611(111698309, -), ADediting_1226612(111698310, -), ADediting_1226613(111698311, -), ADediting_1226614(111698312, -), ADediting_1226615(111698315, -), ADediting_1226616(111698327, -), ADediting_1226617(111698346, -), ADediting_1226618(111698383, -), ADediting_1226619(111698412, -), ADediting_1226620(111698414, -), ADediting_1226621(111698422, -), ADediting_1226622(111698840, -), ADediting_1226623(111698841, -), ADediting_1226624(111698891, -), ADediting_1226625(111698903, -), ADediting_1226626(111698913, -), ADediting_1226627(111698917, -), ADediting_1226628(111698920, -), ADediting_1226629(111698926, -), ADediting_1226630(111698934, -), ADediting_1226631(111698935, -), ADediting_1226632(111698939, -), ADediting_1226633(111698959, -), ADediting_1226634(111698961, -), ADediting_1226635(111698983, -), ADediting_1226636(111698996, -), ADediting_1226637(111699020, -), ADediting_1226638(111699034, -), ADediting_1226639(111699063, -), ADediting_1226640(111699074, -), ADediting_1226641(111705484, -), ADediting_1226642(111705494, -), ADediting_1226643(111705542, -), ADediting_1226644(111705657, -), ADediting_1226645(111705749, -), ADediting_1226646(111705786, -), ADediting_1226647(111705818, -), ADediting_1226648(111705900, -), ADediting_1226649(111705936, -), ADediting_1226650(111733831, -), ADediting_1226651(111733959, -), ADediting_1226652(111739962, -), ADediting_1226653(111740006, -), ADediting_1226659(111740941, -), ADediting_1226660(111740982, -), ADediting_1226661(111740984, -), ADediting_1226662(111740994, -), ADediting_1226663(111740998, -), ADediting_1226664(111741006, -), ADediting_1226665(111741051, -), ADediting_1226670(111743043, -), ADediting_1226671(111743063, -), ADediting_1226672(111743105, -), ADediting_1226673(111743165, -), ADediting_1226674(111743166, -), ADediting_1226680(111778753, -), ADediting_1226681(111778767, -), ADediting_1226682(111866427, -), ADediting_1226683(111866439, -), ADediting_1226684(111866543, -), ADediting_1226685(111866560, -), ADediting_1226686(111866561, -), ADediting_1226687(111866588, -), ADediting_1226688(111866593, -), ADediting_1226689(111866597, -), ADediting_1226690(111867209, -), ADediting_1226691(111867220, -), ADediting_1226692(111867227, -), ADediting_1226693(111867237, -), ADediting_1226694(111867242, -), ADediting_1226695(111867255, -), ADediting_1226696(111867267, -), ADediting_1226697(111867289, -), ADediting_1226698(111867355, -), ADediting_1226699(111869476, -), ADediting_1226700(111869493, -), ADediting_1582308(111666616, -), ADediting_1582309(111666661, -), ADediting_1582310(111666698, -), ADediting_1582311(111666724, -), ADediting_1582312(111666738, -), ADediting_1582313(111666764, -), ADediting_1582314(111667322, -), ADediting_1582315(111699026, -), ADediting_1659095(111734073, -), ADediting_1659096(111866470, -), ADediting_1659097(111867268, -), |
Top |
RNA editing positional annotations for FYN using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1226543 | chr6_111665664_- | intronic |
| ADediting_1226544 | chr6_111665718_- | intronic |
| ADediting_1226545 | chr6_111665719_- | intronic |
| ADediting_1226546 | chr6_111665746_- | intronic |
| ADediting_1226547 | chr6_111665750_- | intronic |
| ADediting_1226548 | chr6_111665760_- | intronic |
| ADediting_1226549 | chr6_111665766_- | intronic |
| ADediting_1226550 | chr6_111665776_- | intronic |
| ADediting_1226551 | chr6_111665786_- | intronic |
| ADediting_1226552 | chr6_111665798_- | intronic |
| ADediting_1226553 | chr6_111665816_- | intronic |
| ADediting_1226554 | chr6_111665822_- | intronic |
| ADediting_1226555 | chr6_111665826_- | intronic |
| ADediting_1226556 | chr6_111665842_- | intronic |
| ADediting_1226557 | chr6_111665846_- | intronic |
| ADediting_1226558 | chr6_111665887_- | intronic |
| ADediting_1226559 | chr6_111665895_- | intronic |
| ADediting_1226560 | chr6_111665896_- | intronic |
| ADediting_1226561 | chr6_111666078_- | intronic |
| ADediting_1226562 | chr6_111666098_- | intronic |
| ADediting_1226563 | chr6_111666099_- | intronic |
| ADediting_1226564 | chr6_111666126_- | intronic |
| ADediting_1226565 | chr6_111666130_- | intronic |
| ADediting_1226566 | chr6_111666151_- | intronic |
| ADediting_1226567 | chr6_111666207_- | intronic |
| ADediting_1226568 | chr6_111666459_- | intronic |
| ADediting_1226569 | chr6_111666598_- | intronic |
| ADediting_1226570 | chr6_111666615_- | intronic |
| ADediting_1226571 | chr6_111666621_- | intronic |
| ADediting_1226572 | chr6_111666653_- | intronic |
| ADediting_1226573 | chr6_111666684_- | intronic |
| ADediting_1226574 | chr6_111666705_- | intronic |
| ADediting_1226575 | chr6_111666709_- | intronic |
| ADediting_1226576 | chr6_111666711_- | intronic |
| ADediting_1226577 | chr6_111666721_- | intronic |
| ADediting_1226578 | chr6_111666723_- | intronic |
| ADediting_1226579 | chr6_111666733_- | intronic |
| ADediting_1226580 | chr6_111666747_- | intronic |
| ADediting_1226581 | chr6_111666750_- | intronic |
| ADediting_1226582 | chr6_111666765_- | intronic |
| ADediting_1226583 | chr6_111666771_- | intronic |
| ADediting_1226584 | chr6_111666773_- | intronic |
| ADediting_1226585 | chr6_111666776_- | intronic |
| ADediting_1226586 | chr6_111666781_- | intronic |
| ADediting_1226587 | chr6_111666807_- | intronic |
| ADediting_1226588 | chr6_111666936_- | intronic |
| ADediting_1226589 | chr6_111667269_- | intronic |
| ADediting_1226590 | chr6_111667315_- | intronic |
| ADediting_1226591 | chr6_111667356_- | intronic |
| ADediting_1226592 | chr6_111667374_- | intronic |
| ADediting_1226593 | chr6_111667380_- | intronic |
| ADediting_1226594 | chr6_111667382_- | intronic |
| ADediting_1226595 | chr6_111667386_- | intronic |
| ADediting_1226596 | chr6_111667453_- | intronic |
| ADediting_1226597 | chr6_111667457_- | intronic |
| ADediting_1226598 | chr6_111667473_- | intronic |
| ADediting_1226599 | chr6_111667481_- | intronic |
| ADediting_1226600 | chr6_111667504_- | intronic |
| ADediting_1226601 | chr6_111669372_- | intronic |
| ADediting_1226602 | chr6_111669401_- | intronic |
| ADediting_1226603 | chr6_111670147_- | intronic |
| ADediting_1226604 | chr6_111698159_- | intronic |
| ADediting_1226605 | chr6_111698230_- | intronic |
| ADediting_1226606 | chr6_111698231_- | intronic |
| ADediting_1226607 | chr6_111698236_- | intronic |
| ADediting_1226608 | chr6_111698239_- | intronic |
| ADediting_1226609 | chr6_111698245_- | intronic |
| ADediting_1226610 | chr6_111698258_- | intronic |
| ADediting_1226611 | chr6_111698309_- | intronic |
| ADediting_1226612 | chr6_111698310_- | intronic |
| ADediting_1226613 | chr6_111698311_- | intronic |
| ADediting_1226614 | chr6_111698312_- | intronic |
| ADediting_1226615 | chr6_111698315_- | intronic |
| ADediting_1226616 | chr6_111698327_- | intronic |
| ADediting_1226617 | chr6_111698346_- | intronic |
| ADediting_1226618 | chr6_111698383_- | intronic |
| ADediting_1226619 | chr6_111698412_- | intronic |
| ADediting_1226620 | chr6_111698414_- | intronic |
| ADediting_1226621 | chr6_111698422_- | intronic |
| ADediting_1226622 | chr6_111698840_- | intronic |
| ADediting_1226623 | chr6_111698841_- | intronic |
| ADediting_1226624 | chr6_111698891_- | intronic |
| ADediting_1226625 | chr6_111698903_- | intronic |
| ADediting_1226626 | chr6_111698913_- | intronic |
| ADediting_1226627 | chr6_111698917_- | intronic |
| ADediting_1226628 | chr6_111698920_- | intronic |
| ADediting_1226629 | chr6_111698926_- | intronic |
| ADediting_1226630 | chr6_111698934_- | intronic |
| ADediting_1226631 | chr6_111698935_- | intronic |
| ADediting_1226632 | chr6_111698939_- | intronic |
| ADediting_1226633 | chr6_111698959_- | intronic |
| ADediting_1226634 | chr6_111698961_- | intronic |
| ADediting_1226635 | chr6_111698983_- | intronic |
| ADediting_1226636 | chr6_111698996_- | intronic |
| ADediting_1226637 | chr6_111699020_- | intronic |
| ADediting_1226638 | chr6_111699034_- | intronic |
| ADediting_1226639 | chr6_111699063_- | intronic |
| ADediting_1226640 | chr6_111699074_- | intronic |
| ADediting_1226641 | chr6_111705484_- | intronic |
| ADediting_1226642 | chr6_111705494_- | intronic |
| ADediting_1226643 | chr6_111705542_- | intronic |
| ADediting_1226644 | chr6_111705657_- | intronic |
| ADediting_1226645 | chr6_111705749_- | intronic |
| ADediting_1226646 | chr6_111705786_- | intronic |
| ADediting_1226647 | chr6_111705818_- | intronic |
| ADediting_1226648 | chr6_111705900_- | intronic |
| ADediting_1226649 | chr6_111705936_- | intronic |
| ADediting_1226650 | chr6_111733831_- | intronic |
| ADediting_1226651 | chr6_111733959_- | intronic |
| ADediting_1226652 | chr6_111739962_- | intronic |
| ADediting_1226653 | chr6_111740006_- | intronic |
| ADediting_1226659 | chr6_111740941_- | intronic |
| ADediting_1226660 | chr6_111740982_- | UTR5 |
| ADediting_1226661 | chr6_111740984_- | UTR5 |
| ADediting_1226662 | chr6_111740994_- | UTR5 |
| ADediting_1226663 | chr6_111740998_- | UTR5 |
| ADediting_1226664 | chr6_111741006_- | UTR5 |
| ADediting_1226665 | chr6_111741051_- | UTR5 |
| ADediting_1226670 | chr6_111743043_- | intronic |
| ADediting_1226671 | chr6_111743063_- | intronic |
| ADediting_1226672 | chr6_111743105_- | intronic |
| ADediting_1226673 | chr6_111743165_- | intronic |
| ADediting_1226674 | chr6_111743166_- | intronic |
| ADediting_1226680 | chr6_111778753_- | intronic |
| ADediting_1226681 | chr6_111778767_- | intronic |
| ADediting_1226682 | chr6_111866427_- | intronic |
| ADediting_1226683 | chr6_111866439_- | intronic |
| ADediting_1226684 | chr6_111866543_- | intronic |
| ADediting_1226685 | chr6_111866560_- | intronic |
| ADediting_1226686 | chr6_111866561_- | intronic |
| ADediting_1226687 | chr6_111866588_- | intronic |
| ADediting_1226688 | chr6_111866593_- | intronic |
| ADediting_1226689 | chr6_111866597_- | intronic |
| ADediting_1226690 | chr6_111867209_- | intronic |
| ADediting_1226691 | chr6_111867220_- | intronic |
| ADediting_1226692 | chr6_111867227_- | intronic |
| ADediting_1226693 | chr6_111867237_- | intronic |
| ADediting_1226694 | chr6_111867242_- | intronic |
| ADediting_1226695 | chr6_111867255_- | intronic |
| ADediting_1226696 | chr6_111867267_- | intronic |
| ADediting_1226697 | chr6_111867289_- | intronic |
| ADediting_1226698 | chr6_111867355_- | intronic |
| ADediting_1226699 | chr6_111869476_- | intronic |
| ADediting_1226700 | chr6_111869493_- | intronic |
| ADediting_1582308 | chr6_111666616_- | intronic |
| ADediting_1582309 | chr6_111666661_- | intronic |
| ADediting_1582310 | chr6_111666698_- | intronic |
| ADediting_1582311 | chr6_111666724_- | intronic |
| ADediting_1582312 | chr6_111666738_- | intronic |
| ADediting_1582313 | chr6_111666764_- | intronic |
| ADediting_1582314 | chr6_111667322_- | intronic |
| ADediting_1582315 | chr6_111699026_- | intronic |
| ADediting_1659095 | chr6_111734073_- | intronic |
| ADediting_1659096 | chr6_111866470_- | intronic |
| ADediting_1659097 | chr6_111867268_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1226543 | chr6_111665664_- | SINE | Alu | Name=AluSz |
| ADediting_1226544 | chr6_111665718_- | SINE | Alu | Name=AluSz |
| ADediting_1226545 | chr6_111665719_- | SINE | Alu | Name=AluSz |
| ADediting_1226546 | chr6_111665746_- | SINE | Alu | Name=AluSz |
| ADediting_1226547 | chr6_111665750_- | SINE | Alu | Name=AluSz |
| ADediting_1226548 | chr6_111665760_- | SINE | Alu | Name=AluSz |
| ADediting_1226549 | chr6_111665766_- | SINE | Alu | Name=AluSz |
| ADediting_1226550 | chr6_111665776_- | SINE | Alu | Name=AluSz |
| ADediting_1226551 | chr6_111665786_- | SINE | Alu | Name=AluSz |
| ADediting_1226552 | chr6_111665798_- | SINE | Alu | Name=AluSz |
| ADediting_1226553 | chr6_111665816_- | SINE | Alu | Name=AluSz |
| ADediting_1226554 | chr6_111665822_- | SINE | Alu | Name=AluSz |
| ADediting_1226555 | chr6_111665826_- | SINE | Alu | Name=AluSz |
| ADediting_1226556 | chr6_111665842_- | SINE | Alu | Name=AluSz |
| ADediting_1226557 | chr6_111665846_- | SINE | Alu | Name=AluSz |
| ADediting_1226558 | chr6_111665887_- | SINE | Alu | Name=AluSz |
| ADediting_1226559 | chr6_111665895_- | SINE | Alu | Name=AluSz |
| ADediting_1226560 | chr6_111665896_- | SINE | Alu | Name=AluSz |
| ADediting_1226561 | chr6_111666078_- | SINE | Alu | Name=AluSz6 |
| ADediting_1226562 | chr6_111666098_- | SINE | Alu | Name=AluSz6 |
| ADediting_1226563 | chr6_111666099_- | SINE | Alu | Name=AluSz6 |
| ADediting_1226564 | chr6_111666126_- | SINE | Alu | Name=AluSz6 |
| ADediting_1226565 | chr6_111666130_- | SINE | Alu | Name=AluSz6 |
| ADediting_1226569 | chr6_111666598_- | SINE | Alu | Name=AluJb |
| ADediting_1226570 | chr6_111666615_- | SINE | Alu | Name=AluJb |
| ADediting_1226571 | chr6_111666621_- | SINE | Alu | Name=AluJb |
| ADediting_1226572 | chr6_111666653_- | SINE | Alu | Name=AluJb |
| ADediting_1226573 | chr6_111666684_- | SINE | Alu | Name=AluJb |
| ADediting_1226574 | chr6_111666705_- | SINE | Alu | Name=AluJb |
| ADediting_1226575 | chr6_111666709_- | SINE | Alu | Name=AluJb |
| ADediting_1226576 | chr6_111666711_- | SINE | Alu | Name=AluJb |
| ADediting_1226577 | chr6_111666721_- | SINE | Alu | Name=AluJb |
| ADediting_1226578 | chr6_111666723_- | SINE | Alu | Name=AluJb |
| ADediting_1226579 | chr6_111666733_- | SINE | Alu | Name=AluJb |
| ADediting_1226580 | chr6_111666747_- | SINE | Alu | Name=AluJb |
| ADediting_1226581 | chr6_111666750_- | SINE | Alu | Name=AluJb |
| ADediting_1226582 | chr6_111666765_- | SINE | Alu | Name=AluJb |
| ADediting_1226583 | chr6_111666771_- | SINE | Alu | Name=AluJb |
| ADediting_1226584 | chr6_111666773_- | SINE | Alu | Name=AluJb |
| ADediting_1226585 | chr6_111666776_- | SINE | Alu | Name=AluJb |
| ADediting_1226586 | chr6_111666781_- | SINE | Alu | Name=AluJb |
| ADediting_1226587 | chr6_111666807_- | SINE | Alu | Name=AluJb |
| ADediting_1226589 | chr6_111667269_- | SINE | Alu | Name=AluJr |
| ADediting_1226590 | chr6_111667315_- | SINE | Alu | Name=AluJr |
| ADediting_1226591 | chr6_111667356_- | SINE | Alu | Name=AluJr |
| ADediting_1226592 | chr6_111667374_- | SINE | Alu | Name=AluJr |
| ADediting_1226593 | chr6_111667380_- | SINE | Alu | Name=AluJr |
| ADediting_1226594 | chr6_111667382_- | SINE | Alu | Name=AluJr |
| ADediting_1226595 | chr6_111667386_- | SINE | Alu | Name=AluJr |
| ADediting_1226596 | chr6_111667453_- | SINE | Alu | Name=AluJr |
| ADediting_1226597 | chr6_111667457_- | SINE | Alu | Name=AluJr |
| ADediting_1226598 | chr6_111667473_- | SINE | Alu | Name=AluJr |
| ADediting_1226599 | chr6_111667481_- | SINE | Alu | Name=AluJr |
| ADediting_1226600 | chr6_111667504_- | SINE | Alu | Name=AluJr |
| ADediting_1226601 | chr6_111669372_- | SINE | Alu | Name=AluSx1 |
| ADediting_1226602 | chr6_111669401_- | SINE | Alu | Name=AluSx1 |
| ADediting_1226603 | chr6_111670147_- | LINE | L2 | Name=L2a |
| ADediting_1226604 | chr6_111698159_- | SINE | Alu | Name=AluSp |
| ADediting_1226605 | chr6_111698230_- | SINE | Alu | Name=AluSp |
| ADediting_1226606 | chr6_111698231_- | SINE | Alu | Name=AluSp |
| ADediting_1226607 | chr6_111698236_- | SINE | Alu | Name=AluSp |
| ADediting_1226608 | chr6_111698239_- | SINE | Alu | Name=AluSp |
| ADediting_1226609 | chr6_111698245_- | SINE | Alu | Name=AluSp |
| ADediting_1226610 | chr6_111698258_- | SINE | Alu | Name=AluSp |
| ADediting_1226611 | chr6_111698309_- | SINE | Alu | Name=AluSp |
| ADediting_1226612 | chr6_111698310_- | SINE | Alu | Name=AluSp |
| ADediting_1226613 | chr6_111698311_- | SINE | Alu | Name=AluSp |
| ADediting_1226614 | chr6_111698312_- | SINE | Alu | Name=AluSp |
| ADediting_1226615 | chr6_111698315_- | SINE | Alu | Name=AluSp |
| ADediting_1226616 | chr6_111698327_- | SINE | Alu | Name=AluSp |
| ADediting_1226617 | chr6_111698346_- | SINE | Alu | Name=AluSp |
| ADediting_1226618 | chr6_111698383_- | SINE | Alu | Name=AluSp |
| ADediting_1226619 | chr6_111698412_- | SINE | Alu | Name=AluSp |
| ADediting_1226620 | chr6_111698414_- | SINE | Alu | Name=AluSp |
| ADediting_1226621 | chr6_111698422_- | SINE | Alu | Name=AluSp |
| ADediting_1226622 | chr6_111698840_- | SINE | Alu | Name=AluSc |
| ADediting_1226623 | chr6_111698841_- | SINE | Alu | Name=AluSc |
| ADediting_1226624 | chr6_111698891_- | SINE | Alu | Name=AluSc |
| ADediting_1226625 | chr6_111698903_- | SINE | Alu | Name=AluSc |
| ADediting_1226626 | chr6_111698913_- | SINE | Alu | Name=AluSc |
| ADediting_1226627 | chr6_111698917_- | SINE | Alu | Name=AluSc |
| ADediting_1226628 | chr6_111698920_- | SINE | Alu | Name=AluSc |
| ADediting_1226629 | chr6_111698926_- | SINE | Alu | Name=AluSc |
| ADediting_1226630 | chr6_111698934_- | SINE | Alu | Name=AluSc |
| ADediting_1226631 | chr6_111698935_- | SINE | Alu | Name=AluSc |
| ADediting_1226632 | chr6_111698939_- | SINE | Alu | Name=AluSc |
| ADediting_1226633 | chr6_111698959_- | SINE | Alu | Name=AluSc |
| ADediting_1226634 | chr6_111698961_- | SINE | Alu | Name=AluSc |
| ADediting_1226635 | chr6_111698983_- | SINE | Alu | Name=AluSc |
| ADediting_1226636 | chr6_111698996_- | SINE | Alu | Name=AluSc |
| ADediting_1226637 | chr6_111699020_- | SINE | Alu | Name=AluSc |
| ADediting_1226638 | chr6_111699034_- | SINE | Alu | Name=AluSc |
| ADediting_1226639 | chr6_111699063_- | SINE | Alu | Name=AluSc |
| ADediting_1226640 | chr6_111699074_- | SINE | Alu | Name=AluSc |
| ADediting_1226641 | chr6_111705484_- | SINE | Alu | Name=AluJo |
| ADediting_1226642 | chr6_111705494_- | SINE | Alu | Name=AluJo |
| ADediting_1226643 | chr6_111705542_- | SINE | Alu | Name=AluJo |
| ADediting_1226644 | chr6_111705657_- | SINE | Alu | Name=AluSx |
| ADediting_1226645 | chr6_111705749_- | SINE | Alu | Name=AluSx |
| ADediting_1226646 | chr6_111705786_- | SINE | Alu | Name=AluSx |
| ADediting_1226647 | chr6_111705818_- | SINE | Alu | Name=AluSx |
| ADediting_1226648 | chr6_111705900_- | SINE | Alu | Name=AluJo |
| ADediting_1226649 | chr6_111705936_- | SINE | Alu | Name=AluJo |
| ADediting_1226650 | chr6_111733831_- | SINE | Alu | Name=AluJb |
| ADediting_1226651 | chr6_111733959_- | SINE | Alu | Name=AluJb |
| ADediting_1226652 | chr6_111739962_- | SINE | Alu | Name=AluSg7 |
| ADediting_1226653 | chr6_111740006_- | SINE | Alu | Name=AluSg7 |
| ADediting_1226659 | chr6_111740941_- | SINE | Alu | Name=AluJb |
| ADediting_1226660 | chr6_111740982_- | SINE | Alu | Name=AluJb |
| ADediting_1226661 | chr6_111740984_- | SINE | Alu | Name=AluJb |
| ADediting_1226662 | chr6_111740994_- | SINE | Alu | Name=AluJb |
| ADediting_1226663 | chr6_111740998_- | SINE | Alu | Name=AluJb |
| ADediting_1226664 | chr6_111741006_- | SINE | Alu | Name=AluJb |
| ADediting_1226665 | chr6_111741051_- | SINE | Alu | Name=AluJb |
| ADediting_1226670 | chr6_111743043_- | SINE | Alu | Name=AluSg |
| ADediting_1226671 | chr6_111743063_- | SINE | Alu | Name=AluSg |
| ADediting_1226672 | chr6_111743105_- | SINE | Alu | Name=AluSg |
| ADediting_1226673 | chr6_111743165_- | SINE | Alu | Name=AluSg |
| ADediting_1226674 | chr6_111743166_- | SINE | Alu | Name=AluSg |
| ADediting_1226680 | chr6_111778753_- | SINE | Alu | Name=AluSc8 |
| ADediting_1226681 | chr6_111778767_- | SINE | Alu | Name=AluSc8 |
| ADediting_1226682 | chr6_111866427_- | SINE | Alu | Name=AluSx |
| ADediting_1226683 | chr6_111866439_- | SINE | Alu | Name=AluSx |
| ADediting_1226684 | chr6_111866543_- | SINE | Alu | Name=AluSx |
| ADediting_1226685 | chr6_111866560_- | SINE | Alu | Name=AluSx |
| ADediting_1226686 | chr6_111866561_- | SINE | Alu | Name=AluSx |
| ADediting_1226687 | chr6_111866588_- | SINE | Alu | Name=AluSx |
| ADediting_1226688 | chr6_111866593_- | SINE | Alu | Name=AluSx |
| ADediting_1226689 | chr6_111866597_- | SINE | Alu | Name=AluSx |
| ADediting_1226690 | chr6_111867209_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226691 | chr6_111867220_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226692 | chr6_111867227_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226693 | chr6_111867237_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226694 | chr6_111867242_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226695 | chr6_111867255_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226696 | chr6_111867267_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226697 | chr6_111867289_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226698 | chr6_111867355_- | SINE | Alu | Name=AluSq2 |
| ADediting_1226699 | chr6_111869476_- | SINE | Alu | Name=AluJb |
| ADediting_1226700 | chr6_111869493_- | SINE | Alu | Name=AluJb |
| ADediting_1582308 | chr6_111666616_- | SINE | Alu | Name=AluJb |
| ADediting_1582309 | chr6_111666661_- | SINE | Alu | Name=AluJb |
| ADediting_1582310 | chr6_111666698_- | SINE | Alu | Name=AluJb |
| ADediting_1582311 | chr6_111666724_- | SINE | Alu | Name=AluJb |
| ADediting_1582312 | chr6_111666738_- | SINE | Alu | Name=AluJb |
| ADediting_1582313 | chr6_111666764_- | SINE | Alu | Name=AluJb |
| ADediting_1582314 | chr6_111667322_- | SINE | Alu | Name=AluJr |
| ADediting_1582315 | chr6_111699026_- | SINE | Alu | Name=AluSc |
| ADediting_1659095 | chr6_111734073_- | SINE | Alu | Name=AluJb |
| ADediting_1659096 | chr6_111866470_- | SINE | Alu | Name=AluSx |
| ADediting_1659097 | chr6_111867268_- | SINE | Alu | Name=AluSq2 |
Top |
RNA A-to-I editing events in the alternative splicing sites for FYN |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ES | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ME2 | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ME2 | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ME2 | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ME2 | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ME2 | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| ME2 | ADediting_1226660 | chr6_111740982_- | 111740975:111740983 | 5ss | 2e | CAGGTGAGC | 9.60 | CGGGTGAGC | 8.19 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for FYN |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |