|
Differntial gene expression between RNA A-to-I edited versus non-edited samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Gene summary for ARHGAP8 |
Gene summary |
Gene information | Gene symbol | ARHGAP8 | Gene ID | 23779 |
Gene name | Rho GTPase activating protein 8 | |
Synonyms | BPGAP1|PP610 | |
Cytomap | 22q13.31 | |
Type of gene | protein-coding | |
Description | rho GTPase-activating protein 8BCH domain-containing Cdc42GAP-like proteinBNIP-2 and Cdc42GAP homology domain-containing, proline-rich and Cdc42GAP-like protein subtype-1rho-type GTPase-activating protein 8 | |
Modification date | 20200313 | |
UniProtAcc | P85298, | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
ARHGAP8 | GO:0070374 | positive regulation of ERK1 and ERK2 cascade | 20179103 |
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RNA A-to-I events for ARHGAP8 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
RNA editing frequencies across three data sets. |
The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
RNA A-to-I editing events in AD. |
ADediting_1003057(44754417, +), ADediting_1003058(44754425, +), ADediting_1003059(44754456, +), ADediting_1003060(44754576, +), ADediting_1003061(44754639, +), ADediting_1003062(44757539, +), ADediting_1003063(44763386, +), ADediting_1003064(44775548, +), ADediting_1003065(44775552, +), ADediting_1003066(44809073, +), ADediting_1003067(44812457, +), ADediting_1003068(44812537, +), ADediting_1003069(44829095, +), ADediting_1003070(44829096, +), ADediting_1003071(44829097, +), ADediting_1003072(44829102, +), ADediting_1003073(44850688, +), ADediting_1003074(44850704, +), ADediting_1003075(44850710, +), ADediting_1003076(44850719, +), ADediting_1003077(44850725, +), ADediting_1003078(44850755, +), ADediting_1003079(44850763, +), ADediting_1003080(44850764, +), ADediting_1003081(44850786, +), ADediting_1003082(44850800, +), ADediting_1003083(44850817, +), ADediting_1003084(44850821, +), ADediting_1003085(44850822, +), ADediting_1003086(44850857, +), ADediting_1003087(44850870, +), ADediting_1003088(44850885, +), ADediting_1003089(44850889, +), ADediting_1003090(44850896, +), ADediting_1003091(44850913, +), ADediting_1003092(44850939, +), ADediting_1003093(44851657, +), ADediting_1003094(44851706, +), ADediting_1003095(44851719, +), ADediting_1003096(44851733, +), ADediting_1003097(44851759, +), ADediting_1003098(44851778, +), ADediting_1003099(44851796, +), ADediting_1003100(44851826, +), ADediting_1003101(44851936, +), ADediting_1003102(44851937, +), ADediting_1003103(44851953, +), ADediting_1003104(44851957, +), ADediting_1003105(44851981, +), ADediting_1003106(44852026, +), ADediting_1003107(44852029, +), ADediting_1003108(44852030, +), ADediting_1003109(44852070, +), ADediting_1003110(44852071, +), ADediting_1003111(44852084, +), ADediting_1003112(44852113, +), ADediting_1003113(44852117, +), ADediting_1003114(44852124, +), ADediting_1003115(44852149, +), ADediting_1003116(44852180, +), ADediting_1003117(44852830, +), ADediting_1003118(44852836, +), ADediting_1003119(44852864, +), ADediting_1003120(44852877, +), ADediting_1003121(44852889, +), ADediting_1003122(44852896, +), ADediting_1003123(44852944, +), ADediting_1003124(44852978, +), ADediting_1003125(44852984, +), ADediting_1003126(44852987, +), ADediting_1003127(44852993, +), ADediting_1003128(44853001, +), ADediting_1003129(44853009, +), ADediting_1003130(44853024, +), ADediting_1003131(44853054, +), ADediting_1003132(44853064, +), ADediting_1003133(44853076, +), ADediting_1003134(44853082, +), ADediting_1003135(44853773, +), ADediting_1003136(44853794, +), ADediting_1003137(44853808, +), ADediting_1003138(44853813, +), ADediting_1003139(44853832, +), ADediting_1003140(44853841, +), ADediting_1003141(44853842, +), ADediting_1003142(44853844, +), ADediting_1003143(44853857, +), ADediting_1003144(44853863, +), ADediting_1003145(44853867, +), ADediting_1003146(44853868, +), ADediting_1003147(44853869, +), ADediting_1003148(44853880, +), ADediting_1003149(44853884, +), ADediting_1003150(44853888, +), ADediting_1003151(44853906, +), ADediting_1003152(44853907, +), ADediting_1003153(44853916, +), ADediting_1003154(44853933, +), ADediting_1003155(44853936, +), ADediting_1003156(44853948, +), ADediting_1003157(44853968, +), ADediting_1003158(44853972, +), ADediting_1003159(44854280, +), ADediting_1003160(44854314, +), ADediting_1003161(44854316, +), ADediting_1003162(44854317, +), ADediting_1003163(44854337, +), ADediting_1003164(44854341, +), ADediting_1003165(44854354, +), ADediting_1003166(44854366, +), ADediting_1003167(44854376, +), ADediting_1003168(44854394, +), ADediting_1003169(44854398, +), ADediting_1003170(44854402, +), ADediting_1003171(44854414, +), ADediting_1003172(44854417, +), ADediting_1003173(44854442, +), ADediting_1003174(44854447, +), ADediting_1003175(44854468, +), ADediting_1003176(44854480, +), ADediting_1003177(44854485, +), ADediting_1003178(44854486, +), ADediting_1003179(44854513, +), ADediting_1003180(44854516, +), ADediting_1003181(44854739, +), ADediting_1003182(44854742, +), ADediting_1003183(44854751, +), ADediting_1003184(44854756, +), ADediting_1003185(44854778, +), ADediting_1003186(44854821, +), ADediting_1003187(44854880, +), ADediting_1003188(44854920, +), ADediting_1003189(44855233, +), ADediting_1003190(44855269, +), ADediting_1003191(44855272, +), ADediting_1003192(44855281, +), ADediting_1003193(44855294, +), ADediting_1003194(44855400, +), ADediting_1003195(44855417, +), ADediting_1003196(44855439, +), ADediting_1003197(44855948, +), ADediting_1003198(44855959, +), ADediting_1003199(44856035, +), ADediting_1003200(44858442, +), ADediting_1003201(44858462, +), ADediting_1003202(44858467, +), ADediting_1003203(44858468, +), ADediting_1003204(44858471, +), ADediting_1003205(44858472, +), ADediting_1003206(44858497, +), ADediting_1003207(44858509, +), ADediting_1003208(44858567, +), ADediting_1003209(44858605, +), ADediting_1003210(44858606, +), ADediting_1003211(44858631, +), ADediting_1003212(44858645, +), ADediting_1003213(44858651, +), ADediting_1003214(44859257, +), ADediting_1003215(44859342, +), ADediting_1003216(44859385, +), ADediting_1003217(44859422, +), ADediting_1003218(44859437, +), ADediting_1003219(44859447, +), ADediting_1003220(44859450, +), ADediting_1003221(44859471, +), ADediting_1571303(44762370, +), ADediting_1571304(44855445, +), ADediting_1571305(44855933, +), ADediting_1571306(44855962, +), ADediting_1571307(44858429, +), ADediting_1642948(44762309, +), ADediting_1642949(44762315, +), ADediting_1642950(44812512, +), |
Top |
RNA editing positional annotations for ARHGAP8 using Annovar |
Protein coding RNA editing(s). |
ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
ADediting_1003066 | chr22_44809073_+ | nonsynonymous SNV | ENST00000389774.6 | c.A367G | p.S123G | 0.154 | 0.154 | -0.17 |
ADediting_1003066 | chr22_44809073_+ | nonsynonymous SNV | ENST00000396119.6 | c.A367G | p.S123G | 0.154 | 0.154 | -0.17 |
Gene structure information of RNA editing(s). |
ADeditome ID | Position | Variant type |
ADediting_1003057 | chr22_44754417_+ | intronic |
ADediting_1003058 | chr22_44754425_+ | intronic |
ADediting_1003059 | chr22_44754456_+ | intronic |
ADediting_1003060 | chr22_44754576_+ | intronic |
ADediting_1003061 | chr22_44754639_+ | intronic |
ADediting_1003062 | chr22_44757539_+ | intronic |
ADediting_1003063 | chr22_44763386_+ | intronic |
ADediting_1003064 | chr22_44775548_+ | intronic |
ADediting_1003065 | chr22_44775552_+ | intronic |
ADediting_1003066 | chr22_44809073_+ | exonic |
ADediting_1003067 | chr22_44812457_+ | intronic |
ADediting_1003068 | chr22_44812537_+ | intronic |
ADediting_1003069 | chr22_44829095_+ | intronic |
ADediting_1003070 | chr22_44829096_+ | intronic |
ADediting_1003071 | chr22_44829097_+ | intronic |
ADediting_1003072 | chr22_44829102_+ | intronic |
ADediting_1003073 | chr22_44850688_+ | intronic |
ADediting_1003074 | chr22_44850704_+ | intronic |
ADediting_1003075 | chr22_44850710_+ | intronic |
ADediting_1003076 | chr22_44850719_+ | intronic |
ADediting_1003077 | chr22_44850725_+ | intronic |
ADediting_1003078 | chr22_44850755_+ | intronic |
ADediting_1003079 | chr22_44850763_+ | intronic |
ADediting_1003080 | chr22_44850764_+ | intronic |
ADediting_1003081 | chr22_44850786_+ | intronic |
ADediting_1003082 | chr22_44850800_+ | intronic |
ADediting_1003083 | chr22_44850817_+ | intronic |
ADediting_1003084 | chr22_44850821_+ | intronic |
ADediting_1003085 | chr22_44850822_+ | intronic |
ADediting_1003086 | chr22_44850857_+ | intronic |
ADediting_1003087 | chr22_44850870_+ | intronic |
ADediting_1003088 | chr22_44850885_+ | intronic |
ADediting_1003089 | chr22_44850889_+ | intronic |
ADediting_1003090 | chr22_44850896_+ | intronic |
ADediting_1003091 | chr22_44850913_+ | intronic |
ADediting_1003092 | chr22_44850939_+ | intronic |
ADediting_1003093 | chr22_44851657_+ | intronic |
ADediting_1003094 | chr22_44851706_+ | intronic |
ADediting_1003095 | chr22_44851719_+ | intronic |
ADediting_1003096 | chr22_44851733_+ | intronic |
ADediting_1003097 | chr22_44851759_+ | intronic |
ADediting_1003098 | chr22_44851778_+ | intronic |
ADediting_1003099 | chr22_44851796_+ | intronic |
ADediting_1003100 | chr22_44851826_+ | intronic |
ADediting_1003101 | chr22_44851936_+ | intronic |
ADediting_1003102 | chr22_44851937_+ | intronic |
ADediting_1003103 | chr22_44851953_+ | intronic |
ADediting_1003104 | chr22_44851957_+ | intronic |
ADediting_1003105 | chr22_44851981_+ | intronic |
ADediting_1003106 | chr22_44852026_+ | intronic |
ADediting_1003107 | chr22_44852029_+ | intronic |
ADediting_1003108 | chr22_44852030_+ | intronic |
ADediting_1003109 | chr22_44852070_+ | intronic |
ADediting_1003110 | chr22_44852071_+ | intronic |
ADediting_1003111 | chr22_44852084_+ | intronic |
ADediting_1003112 | chr22_44852113_+ | intronic |
ADediting_1003113 | chr22_44852117_+ | intronic |
ADediting_1003114 | chr22_44852124_+ | intronic |
ADediting_1003115 | chr22_44852149_+ | intronic |
ADediting_1003116 | chr22_44852180_+ | intronic |
ADediting_1003117 | chr22_44852830_+ | intronic |
ADediting_1003118 | chr22_44852836_+ | intronic |
ADediting_1003119 | chr22_44852864_+ | intronic |
ADediting_1003120 | chr22_44852877_+ | intronic |
ADediting_1003121 | chr22_44852889_+ | intronic |
ADediting_1003122 | chr22_44852896_+ | intronic |
ADediting_1003123 | chr22_44852944_+ | intronic |
ADediting_1003124 | chr22_44852978_+ | intronic |
ADediting_1003125 | chr22_44852984_+ | intronic |
ADediting_1003126 | chr22_44852987_+ | intronic |
ADediting_1003127 | chr22_44852993_+ | intronic |
ADediting_1003128 | chr22_44853001_+ | intronic |
ADediting_1003129 | chr22_44853009_+ | intronic |
ADediting_1003130 | chr22_44853024_+ | intronic |
ADediting_1003131 | chr22_44853054_+ | intronic |
ADediting_1003132 | chr22_44853064_+ | intronic |
ADediting_1003133 | chr22_44853076_+ | intronic |
ADediting_1003134 | chr22_44853082_+ | intronic |
ADediting_1003135 | chr22_44853773_+ | intronic |
ADediting_1003136 | chr22_44853794_+ | intronic |
ADediting_1003137 | chr22_44853808_+ | intronic |
ADediting_1003138 | chr22_44853813_+ | intronic |
ADediting_1003139 | chr22_44853832_+ | intronic |
ADediting_1003140 | chr22_44853841_+ | intronic |
ADediting_1003141 | chr22_44853842_+ | intronic |
ADediting_1003142 | chr22_44853844_+ | intronic |
ADediting_1003143 | chr22_44853857_+ | intronic |
ADediting_1003144 | chr22_44853863_+ | intronic |
ADediting_1003145 | chr22_44853867_+ | intronic |
ADediting_1003146 | chr22_44853868_+ | intronic |
ADediting_1003147 | chr22_44853869_+ | intronic |
ADediting_1003148 | chr22_44853880_+ | intronic |
ADediting_1003149 | chr22_44853884_+ | intronic |
ADediting_1003150 | chr22_44853888_+ | intronic |
ADediting_1003151 | chr22_44853906_+ | intronic |
ADediting_1003152 | chr22_44853907_+ | intronic |
ADediting_1003153 | chr22_44853916_+ | intronic |
ADediting_1003154 | chr22_44853933_+ | intronic |
ADediting_1003155 | chr22_44853936_+ | intronic |
ADediting_1003156 | chr22_44853948_+ | intronic |
ADediting_1003157 | chr22_44853968_+ | intronic |
ADediting_1003158 | chr22_44853972_+ | intronic |
ADediting_1003159 | chr22_44854280_+ | intronic |
ADediting_1003160 | chr22_44854314_+ | intronic |
ADediting_1003161 | chr22_44854316_+ | intronic |
ADediting_1003162 | chr22_44854317_+ | intronic |
ADediting_1003163 | chr22_44854337_+ | intronic |
ADediting_1003164 | chr22_44854341_+ | intronic |
ADediting_1003165 | chr22_44854354_+ | intronic |
ADediting_1003166 | chr22_44854366_+ | intronic |
ADediting_1003167 | chr22_44854376_+ | intronic |
ADediting_1003168 | chr22_44854394_+ | intronic |
ADediting_1003169 | chr22_44854398_+ | intronic |
ADediting_1003170 | chr22_44854402_+ | intronic |
ADediting_1003171 | chr22_44854414_+ | intronic |
ADediting_1003172 | chr22_44854417_+ | intronic |
ADediting_1003173 | chr22_44854442_+ | intronic |
ADediting_1003174 | chr22_44854447_+ | intronic |
ADediting_1003175 | chr22_44854468_+ | intronic |
ADediting_1003176 | chr22_44854480_+ | intronic |
ADediting_1003177 | chr22_44854485_+ | intronic |
ADediting_1003178 | chr22_44854486_+ | intronic |
ADediting_1003179 | chr22_44854513_+ | intronic |
ADediting_1003180 | chr22_44854516_+ | intronic |
ADediting_1003181 | chr22_44854739_+ | intronic |
ADediting_1003182 | chr22_44854742_+ | intronic |
ADediting_1003183 | chr22_44854751_+ | intronic |
ADediting_1003184 | chr22_44854756_+ | intronic |
ADediting_1003185 | chr22_44854778_+ | intronic |
ADediting_1003186 | chr22_44854821_+ | intronic |
ADediting_1003187 | chr22_44854880_+ | intronic |
ADediting_1003188 | chr22_44854920_+ | intronic |
ADediting_1003189 | chr22_44855233_+ | intronic |
ADediting_1003190 | chr22_44855269_+ | intronic |
ADediting_1003191 | chr22_44855272_+ | intronic |
ADediting_1003192 | chr22_44855281_+ | intronic |
ADediting_1003193 | chr22_44855294_+ | intronic |
ADediting_1003194 | chr22_44855400_+ | intronic |
ADediting_1003195 | chr22_44855417_+ | intronic |
ADediting_1003196 | chr22_44855439_+ | intronic |
ADediting_1003197 | chr22_44855948_+ | intronic |
ADediting_1003198 | chr22_44855959_+ | intronic |
ADediting_1003199 | chr22_44856035_+ | intronic |
ADediting_1003200 | chr22_44858442_+ | intronic |
ADediting_1003201 | chr22_44858462_+ | intronic |
ADediting_1003202 | chr22_44858467_+ | intronic |
ADediting_1003203 | chr22_44858468_+ | intronic |
ADediting_1003204 | chr22_44858471_+ | intronic |
ADediting_1003205 | chr22_44858472_+ | intronic |
ADediting_1003206 | chr22_44858497_+ | intronic |
ADediting_1003207 | chr22_44858509_+ | intronic |
ADediting_1003208 | chr22_44858567_+ | intronic |
ADediting_1003209 | chr22_44858605_+ | intronic |
ADediting_1003210 | chr22_44858606_+ | intronic |
ADediting_1003211 | chr22_44858631_+ | intronic |
ADediting_1003212 | chr22_44858645_+ | intronic |
ADediting_1003213 | chr22_44858651_+ | intronic |
ADediting_1003214 | chr22_44859257_+ | intronic |
ADediting_1003215 | chr22_44859342_+ | intronic |
ADediting_1003216 | chr22_44859385_+ | intronic |
ADediting_1003217 | chr22_44859422_+ | intronic |
ADediting_1003218 | chr22_44859437_+ | intronic |
ADediting_1003219 | chr22_44859447_+ | intronic |
ADediting_1003220 | chr22_44859450_+ | intronic |
ADediting_1003221 | chr22_44859471_+ | intronic |
ADediting_1571303 | chr22_44762370_+ | intronic |
ADediting_1571304 | chr22_44855445_+ | intronic |
ADediting_1571305 | chr22_44855933_+ | intronic |
ADediting_1571306 | chr22_44855962_+ | intronic |
ADediting_1571307 | chr22_44858429_+ | intronic |
ADediting_1642948 | chr22_44762309_+ | intronic |
ADediting_1642949 | chr22_44762315_+ | intronic |
ADediting_1642950 | chr22_44812512_+ | intronic |
Repat-regional RNA editing(s). |
ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
ADediting_1003057 | chr22_44754417_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003058 | chr22_44754425_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003059 | chr22_44754456_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003060 | chr22_44754576_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003061 | chr22_44754639_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003062 | chr22_44757539_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003063 | chr22_44763386_+ | SINE | Alu | Name=AluSz6 |
ADediting_1003064 | chr22_44775548_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003065 | chr22_44775552_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003066 | chr22_44809073_+ | SINE | Alu | Name=AluJo |
ADediting_1003067 | chr22_44812457_+ | SINE | Alu | Name=AluSc |
ADediting_1003068 | chr22_44812537_+ | SINE | Alu | Name=AluSc |
ADediting_1003069 | chr22_44829095_+ | SINE | Alu | Name=AluSx |
ADediting_1003070 | chr22_44829096_+ | SINE | Alu | Name=AluSx |
ADediting_1003071 | chr22_44829097_+ | SINE | Alu | Name=AluSx |
ADediting_1003072 | chr22_44829102_+ | SINE | Alu | Name=AluSx |
ADediting_1003073 | chr22_44850688_+ | SINE | Alu | Name=AluSz |
ADediting_1003074 | chr22_44850704_+ | SINE | Alu | Name=AluSz |
ADediting_1003075 | chr22_44850710_+ | SINE | Alu | Name=AluSz |
ADediting_1003076 | chr22_44850719_+ | SINE | Alu | Name=AluSz |
ADediting_1003077 | chr22_44850725_+ | SINE | Alu | Name=AluSz |
ADediting_1003078 | chr22_44850755_+ | SINE | Alu | Name=AluSz |
ADediting_1003079 | chr22_44850763_+ | SINE | Alu | Name=AluSz |
ADediting_1003080 | chr22_44850764_+ | SINE | Alu | Name=AluSz |
ADediting_1003081 | chr22_44850786_+ | SINE | Alu | Name=AluSz |
ADediting_1003082 | chr22_44850800_+ | SINE | Alu | Name=AluSz |
ADediting_1003083 | chr22_44850817_+ | SINE | Alu | Name=AluSz |
ADediting_1003084 | chr22_44850821_+ | SINE | Alu | Name=AluSz |
ADediting_1003085 | chr22_44850822_+ | SINE | Alu | Name=AluSz |
ADediting_1003086 | chr22_44850857_+ | SINE | Alu | Name=AluSz |
ADediting_1003087 | chr22_44850870_+ | SINE | Alu | Name=AluSz |
ADediting_1003088 | chr22_44850885_+ | SINE | Alu | Name=AluSz |
ADediting_1003089 | chr22_44850889_+ | SINE | Alu | Name=AluSz |
ADediting_1003090 | chr22_44850896_+ | SINE | Alu | Name=AluSz |
ADediting_1003091 | chr22_44850913_+ | SINE | Alu | Name=AluSz |
ADediting_1003092 | chr22_44850939_+ | SINE | Alu | Name=AluSz |
ADediting_1003093 | chr22_44851657_+ | SINE | Alu | Name=AluJr |
ADediting_1003094 | chr22_44851706_+ | SINE | Alu | Name=AluJr |
ADediting_1003095 | chr22_44851719_+ | SINE | Alu | Name=AluJr |
ADediting_1003096 | chr22_44851733_+ | SINE | Alu | Name=AluJr |
ADediting_1003097 | chr22_44851759_+ | SINE | Alu | Name=AluJr |
ADediting_1003098 | chr22_44851778_+ | SINE | Alu | Name=AluJr |
ADediting_1003099 | chr22_44851796_+ | SINE | Alu | Name=AluJr |
ADediting_1003100 | chr22_44851826_+ | SINE | Alu | Name=AluJr |
ADediting_1003101 | chr22_44851936_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003102 | chr22_44851937_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003103 | chr22_44851953_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003104 | chr22_44851957_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003105 | chr22_44851981_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003106 | chr22_44852026_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003107 | chr22_44852029_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003108 | chr22_44852030_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003109 | chr22_44852070_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003110 | chr22_44852071_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003111 | chr22_44852084_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003112 | chr22_44852113_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003113 | chr22_44852117_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003114 | chr22_44852124_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003115 | chr22_44852149_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003116 | chr22_44852180_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003117 | chr22_44852830_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003118 | chr22_44852836_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003119 | chr22_44852864_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003120 | chr22_44852877_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003121 | chr22_44852889_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003122 | chr22_44852896_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003123 | chr22_44852944_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003124 | chr22_44852978_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003125 | chr22_44852984_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003126 | chr22_44852987_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003127 | chr22_44852993_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003128 | chr22_44853001_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003129 | chr22_44853009_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003130 | chr22_44853024_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003131 | chr22_44853054_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003132 | chr22_44853064_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003133 | chr22_44853076_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003134 | chr22_44853082_+ | SINE | Alu | Name=AluSc8 |
ADediting_1003135 | chr22_44853773_+ | SINE | Alu | Name=AluSp |
ADediting_1003136 | chr22_44853794_+ | SINE | Alu | Name=AluSp |
ADediting_1003137 | chr22_44853808_+ | SINE | Alu | Name=AluSp |
ADediting_1003138 | chr22_44853813_+ | SINE | Alu | Name=AluSp |
ADediting_1003139 | chr22_44853832_+ | SINE | Alu | Name=AluSp |
ADediting_1003140 | chr22_44853841_+ | SINE | Alu | Name=AluSp |
ADediting_1003141 | chr22_44853842_+ | SINE | Alu | Name=AluSp |
ADediting_1003142 | chr22_44853844_+ | SINE | Alu | Name=AluSp |
ADediting_1003143 | chr22_44853857_+ | SINE | Alu | Name=AluSp |
ADediting_1003144 | chr22_44853863_+ | SINE | Alu | Name=AluSp |
ADediting_1003145 | chr22_44853867_+ | SINE | Alu | Name=AluSp |
ADediting_1003146 | chr22_44853868_+ | SINE | Alu | Name=AluSp |
ADediting_1003147 | chr22_44853869_+ | SINE | Alu | Name=AluSp |
ADediting_1003148 | chr22_44853880_+ | SINE | Alu | Name=AluSp |
ADediting_1003149 | chr22_44853884_+ | SINE | Alu | Name=AluSp |
ADediting_1003150 | chr22_44853888_+ | SINE | Alu | Name=AluSp |
ADediting_1003151 | chr22_44853906_+ | SINE | Alu | Name=AluSp |
ADediting_1003152 | chr22_44853907_+ | SINE | Alu | Name=AluSp |
ADediting_1003153 | chr22_44853916_+ | SINE | Alu | Name=AluSp |
ADediting_1003154 | chr22_44853933_+ | SINE | Alu | Name=AluSp |
ADediting_1003155 | chr22_44853936_+ | SINE | Alu | Name=AluSp |
ADediting_1003156 | chr22_44853948_+ | SINE | Alu | Name=AluSp |
ADediting_1003157 | chr22_44853968_+ | SINE | Alu | Name=AluSp |
ADediting_1003158 | chr22_44853972_+ | SINE | Alu | Name=AluSp |
ADediting_1003159 | chr22_44854280_+ | SINE | Alu | Name=AluSz |
ADediting_1003160 | chr22_44854314_+ | SINE | Alu | Name=AluSz |
ADediting_1003161 | chr22_44854316_+ | SINE | Alu | Name=AluSz |
ADediting_1003162 | chr22_44854317_+ | SINE | Alu | Name=AluSz |
ADediting_1003163 | chr22_44854337_+ | SINE | Alu | Name=AluSz |
ADediting_1003164 | chr22_44854341_+ | SINE | Alu | Name=AluSz |
ADediting_1003165 | chr22_44854354_+ | SINE | Alu | Name=AluSz |
ADediting_1003166 | chr22_44854366_+ | SINE | Alu | Name=AluSz |
ADediting_1003167 | chr22_44854376_+ | SINE | Alu | Name=AluSz |
ADediting_1003168 | chr22_44854394_+ | SINE | Alu | Name=AluSz |
ADediting_1003169 | chr22_44854398_+ | SINE | Alu | Name=AluSz |
ADediting_1003170 | chr22_44854402_+ | SINE | Alu | Name=AluSz |
ADediting_1003171 | chr22_44854414_+ | SINE | Alu | Name=AluSz |
ADediting_1003172 | chr22_44854417_+ | SINE | Alu | Name=AluSz |
ADediting_1003173 | chr22_44854442_+ | SINE | Alu | Name=AluSz |
ADediting_1003174 | chr22_44854447_+ | SINE | Alu | Name=AluSz |
ADediting_1003175 | chr22_44854468_+ | SINE | Alu | Name=AluSz |
ADediting_1003176 | chr22_44854480_+ | SINE | Alu | Name=AluSz |
ADediting_1003177 | chr22_44854485_+ | SINE | Alu | Name=AluSz |
ADediting_1003178 | chr22_44854486_+ | SINE | Alu | Name=AluSz |
ADediting_1003179 | chr22_44854513_+ | SINE | Alu | Name=AluSz |
ADediting_1003180 | chr22_44854516_+ | SINE | Alu | Name=AluSz |
ADediting_1003181 | chr22_44854739_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003182 | chr22_44854742_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003183 | chr22_44854751_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003184 | chr22_44854756_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003185 | chr22_44854778_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003186 | chr22_44854821_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003187 | chr22_44854880_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003188 | chr22_44854920_+ | SINE | Alu | Name=AluSx1 |
ADediting_1003190 | chr22_44855269_+ | SINE | Alu | Name=AluJb |
ADediting_1003191 | chr22_44855272_+ | SINE | Alu | Name=AluJb |
ADediting_1003192 | chr22_44855281_+ | SINE | Alu | Name=AluJb |
ADediting_1003193 | chr22_44855294_+ | SINE | Alu | Name=AluJb |
ADediting_1003194 | chr22_44855400_+ | SINE | Alu | Name=AluJb |
ADediting_1003195 | chr22_44855417_+ | SINE | Alu | Name=AluJb |
ADediting_1003196 | chr22_44855439_+ | SINE | Alu | Name=AluJb |
ADediting_1003197 | chr22_44855948_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003198 | chr22_44855959_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003199 | chr22_44856035_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003200 | chr22_44858442_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003201 | chr22_44858462_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003202 | chr22_44858467_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003203 | chr22_44858468_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003204 | chr22_44858471_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003205 | chr22_44858472_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003206 | chr22_44858497_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003207 | chr22_44858509_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003208 | chr22_44858567_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003209 | chr22_44858605_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003210 | chr22_44858606_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003211 | chr22_44858631_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003212 | chr22_44858645_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003213 | chr22_44858651_+ | SINE | Alu | Name=AluSq2 |
ADediting_1003214 | chr22_44859257_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003215 | chr22_44859342_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003216 | chr22_44859385_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003217 | chr22_44859422_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003218 | chr22_44859437_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003219 | chr22_44859447_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003220 | chr22_44859450_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1003221 | chr22_44859471_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1571303 | chr22_44762370_+ | SINE | Alu | Name=AluJr |
ADediting_1571304 | chr22_44855445_+ | SINE | Alu | Name=AluJb |
ADediting_1571305 | chr22_44855933_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1571306 | chr22_44855962_+ | LTR | ERVL-MaLR | Name=MSTA |
ADediting_1571307 | chr22_44858429_+ | SINE | Alu | Name=AluSq2 |
ADediting_1642948 | chr22_44762309_+ | SINE | Alu | Name=AluJr |
ADediting_1642949 | chr22_44762315_+ | SINE | Alu | Name=AluJr |
ADediting_1642950 | chr22_44812512_+ | SINE | Alu | Name=AluSc |
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RNA A-to-I editing events in the alternative splicing sites for ARHGAP8 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ARHGAP8 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for ARHGAP8 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for ARHGAP8 |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
ADediting_1535953 | chr14_101045971_+ | ENSG00000241484.9 | ENST00000336963.8 | ARHGAP8-201 | hsa-miR-381-3p | chr22 | 44862646 | 44862652 | 7mer-m8 | 44862631 | 44862653 | 153 | -13.49 |
ADediting_1535953 | chr14_101045971_+ | ENSG00000241484.9 | ENST00000356099.10 | ARHGAP8-202 | hsa-miR-381-3p | chr22 | 44862646 | 44862652 | 7mer-m8 | 44862631 | 44862653 | 153 | -13.49 |
ADediting_1535953 | chr14_101045971_+ | ENSG00000241484.9 | ENST00000389774.6 | ARHGAP8-204 | hsa-miR-381-3p | chr22 | 44862646 | 44862652 | 7mer-m8 | 44862631 | 44862653 | 153 | -13.49 |
ADediting_1535954 | chr14_101045974_+ | ENSG00000241484.9 | ENST00000336963.8 | ARHGAP8-201 | hsa-miR-381-3p | chr22 | 44862646 | 44862652 | 7mer-m8 | 44862631 | 44862653 | 153 | -13.49 |
ADediting_1535954 | chr14_101045974_+ | ENSG00000241484.9 | ENST00000356099.10 | ARHGAP8-202 | hsa-miR-381-3p | chr22 | 44862646 | 44862652 | 7mer-m8 | 44862631 | 44862653 | 153 | -13.49 |
ADediting_1535954 | chr14_101045974_+ | ENSG00000241484.9 | ENST00000389774.6 | ARHGAP8-204 | hsa-miR-381-3p | chr22 | 44862646 | 44862652 | 7mer-m8 | 44862631 | 44862653 | 153 | -13.49 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for ARHGAP8 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000396119.6 | protein_coding | ||
ENST00000389774.6 | protein_coding |
RNA A-to-I editing in miRNA. |
ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
ADediting_1003066 | ENST00000396119.6 | chr22_44809073_+ | 548 | -240.70 | -236.50 | -240.70 |
ADediting_1003066 | ENST00000389774.6 | chr22_44809073_+ | 508 | -623.60 | -623.20 | -623.60 |
RNA A-to-I editing in lncRNA. |
ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ARHGAP8 |
Correlation between ADAR gene expression and RNA editing frequency |
Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
DLPFC | ADediting_1003098 | chr22_44851778_+ | 0.450069280548074 | 0.0430521571927072 | 0.467860791690825 | -0.0413814950840525 | 6.53057029034568e-09 | 0.322043651929288 |
DLPFC | ADediting_1003103 | chr22_44851953_+ | 0.0970283548361872 | 0.0944202885665128 | 0.593989527368778 | -0.0303917608215897 | 1.73394034022956e-16 | 0.445068975717102 |
DLPFC | ADediting_1003111 | chr22_44852084_+ | 0.981727056704176 | -0.00130612090867666 | 0.146272731446752 | -0.0827075233908137 | 1.12091720191761e-09 | 0.337136411655748 |
DLPFC | ADediting_1003112 | chr22_44852113_+ | 0.946276875765244 | -0.00384260106137876 | 0.0848177549010648 | -0.0980421816784211 | 1.538711694558e-13 | 0.403073841972516 |
DLPFC | ADediting_1003113 | chr22_44852117_+ | 0.994163252156701 | -0.000417168855084125 | 0.0797671223385296 | -0.0996638500042849 | 5.38981398957345e-13 | 0.394632550651844 |
DLPFC | ADediting_1003114 | chr22_44852124_+ | 0.844890375995178 | -0.0111564430277002 | 0.0538555717251934 | -0.109615474732288 | 1.20135684430728e-12 | 0.389106588376705 |
DLPFC | ADediting_1003115 | chr22_44852149_+ | 0.509341886680919 | -0.0376163824000782 | 0.0253961596453449 | -0.126956541548023 | 1.10524016903267e-11 | 0.373242564878612 |
DLPFC | ADediting_1003119 | chr22_44852864_+ | 0.0167490087624042 | 0.135784924766252 | 0.789949033504735 | 0.0151896751045442 | 4.90527993505974e-15 | 0.425120160735966 |
DLPFC | ADediting_1003120 | chr22_44852877_+ | 0.12362761315918 | 0.087636152944728 | 0.883686732101835 | -0.00834268361194888 | 2.26612440915896e-15 | 0.42984712667693 |
DLPFC | ADediting_1003121 | chr22_44852889_+ | 0.167477815934316 | 0.0785949957775834 | 0.486198780428865 | -0.0396957793965457 | 3.32502047486632e-16 | 0.441284679781238 |
DLPFC | ADediting_1003122 | chr22_44852896_+ | 0.0692237955730625 | 0.103337209503996 | 0.88310826055752 | -0.00838447311419846 | 5.67515452040836e-17 | 0.451453013856179 |
DLPFC | ADediting_1003131 | chr22_44853054_+ | 0.00162291828969894 | 0.17829159073314 | 0.417392401513225 | 0.0462211614952334 | 3.37095534266899e-15 | 0.427425517321993 |
DLPFC | ADediting_1003133 | chr22_44853076_+ | 0.0222457494214167 | 0.129818847963667 | 0.439840205788115 | 0.044029542811105 | 5.82768642713132e-08 | 0.302057764384494 |
DLPFC | ADediting_1003160 | chr22_44854314_+ | 0.347096031971664 | 0.0535799513881153 | 0.215672783166168 | -0.070517607114862 | 5.96403778826716e-16 | 0.437848090100444 |
DLPFC | ADediting_1003162 | chr22_44854317_+ | 0.188338210838116 | 0.0749136112472169 | 0.467912617906358 | -0.0413766805232957 | 6.59567408670924e-15 | 0.423287891729317 |
DLPFC | ADediting_1003164 | chr22_44854341_+ | 0.396405255613973 | 0.0483335985792437 | 0.384384783235151 | -0.0495737937615567 | 4.17895435287339e-10 | 0.34524253873945 |
DLPFC | ADediting_1003166 | chr22_44854366_+ | 0.0758614654325684 | 0.100975828432858 | 0.508279764610067 | -0.0377107094943238 | 7.72841482101489e-18 | 0.462527052893655 |
DLPFC | ADediting_1003168 | chr22_44854394_+ | 0.471159553405785 | 0.041075629425645 | 0.249171561020149 | -0.0656444434833073 | 1.65638017348182e-13 | 0.402584198695404 |
DLPFC | ADediting_1003174 | chr22_44854447_+ | 0.536321428609119 | 0.0352534173045838 | 0.230157252961199 | -0.0683491889238074 | 6.66179936135102e-11 | 0.359737406209331 |
DLPFC | ADediting_1003179 | chr22_44854513_+ | 0.0275352151337878 | 0.125182948244841 | 0.86396003448203 | -0.00977043562576299 | 2.42520029295225e-18 | 0.4687843714013 |
DLPFC | ADediting_1003182 | chr22_44854742_+ | 0.10094480795924 | 0.0933358164606524 | 0.732550763287629 | -0.0194860870394013 | 3.05527497503788e-14 | 0.413619106670551 |
DLPFC | ADediting_1003183 | chr22_44854751_+ | 0.207638037248355 | 0.0717657262556735 | 0.460458749324762 | -0.0420721858442085 | 4.39320695944979e-15 | 0.425799569925344 |
DLPFC | ADediting_1003187 | chr22_44854880_+ | 0.0118397758547312 | 0.142793003661466 | 0.595134255001372 | 0.0302975606216468 | 1.00379630648483e-13 | 0.4058964594536 |
Correlation between ADAR gene expression and this gene's expression |
Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
DLPFC | 3.57187929375209e-07 | 0.284280452680327 | 9.60227473729609e-09 | 0.318628909460319 | 1.07642740421249e-05 | 0.247084246705054 |
AC | 5.85985052848915e-11 | 0.398779599680924 | 7.28429283760622e-09 | 0.355583425462716 | 3.01680988836224e-07 | 0.317155632648175 |
PCC | 0.000222078051693576 | 0.264151113617148 | 0.00513098844589754 | 0.201744168080941 | 6.29733088623671e-07 | 0.351229775342221 |
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Relation with AD stages for ARHGAP8 |
Correlation between AD stages and RNA editing frequency |
Tissue | ADeditomID | position | P-val | Coeff. |
Correlation between AD stages and this gene's expression |
Tissue | P-val | Coeff. |
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RelatedDrugs for ARHGAP8 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ARHGAP8 |
Diseases associated with this gene. (DisGeNet 4.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |