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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CBX5 |
 Gene summary |
| Gene information | Gene symbol | CBX5 | Gene ID | 23468 |
| Gene name | chromobox 5 | |
| Synonyms | HEL25|HP1|HP1A | |
| Cytomap | 12q13.13 | |
| Type of gene | protein-coding | |
| Description | chromobox protein homolog 5HP1 alpha homologHP1-ALPHAHP1Hs alphaantigen p25chromobox homolog 5 (HP1 alpha homolog, Drosophila)epididymis luminal protein 25heterochromatin protein 1 homolog alphaheterochromatin protein 1-alpha | |
| Modification date | 20200313 | |
| UniProtAcc | P45973, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| CBX5 | GO:0045892 | negative regulation of transcription, DNA-templated | 9636147 |
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RNA A-to-I events for CBX5 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_355948(54233671, -), ADediting_355949(54233696, -), ADediting_355950(54233757, -), ADediting_355951(54233763, -), ADediting_355952(54233816, -), ADediting_355953(54233829, -), ADediting_355954(54233854, -), ADediting_355955(54233856, -), ADediting_355956(54233938, -), ADediting_355957(54234014, -), ADediting_355958(54234093, -), ADediting_355959(54234096, -), ADediting_355960(54234097, -), ADediting_355961(54235358, -), ADediting_355962(54235389, -), ADediting_355963(54235425, -), ADediting_355964(54235551, -), ADediting_355965(54237935, -), ADediting_355966(54237947, -), ADediting_355967(54237948, -), ADediting_355968(54237962, -), ADediting_355969(54238068, -), ADediting_355970(54238090, -), ADediting_355971(54238107, -), ADediting_355972(54238108, -), ADediting_355973(54238164, -), ADediting_355974(54240458, -), ADediting_355975(54240473, -), ADediting_355976(54240477, -), ADediting_355977(54240491, -), ADediting_355978(54240499, -), ADediting_355979(54240500, -), ADediting_355980(54240516, -), ADediting_355981(54240518, -), ADediting_355982(54240522, -), ADediting_355983(54243029, -), ADediting_355984(54244555, -), ADediting_355985(54244707, -), ADediting_355986(54245087, -), ADediting_355987(54245097, -), ADediting_355988(54245123, -), ADediting_355989(54245175, -), ADediting_355990(54245179, -), ADediting_355991(54245238, -), ADediting_355992(54245277, -), ADediting_355993(54245284, -), ADediting_355994(54246681, -), ADediting_355995(54247949, -), ADediting_355996(54247957, -), ADediting_355997(54247965, -), ADediting_355998(54247985, -), ADediting_355999(54248005, -), ADediting_356000(54248045, -), ADediting_356001(54248208, -), ADediting_356002(54253835, -), ADediting_356003(54253839, -), ADediting_1533225(54233674, -), ADediting_1533226(54233855, -), ADediting_1533227(54235421, -), ADediting_1533228(54240467, -), ADediting_1614190(54233686, -), ADediting_1614191(54235393, -), ADediting_1614192(54235396, -), ADediting_1614193(54238052, -), ADediting_1614194(54238187, -), |
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RNA editing positional annotations for CBX5 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_355948 | chr12_54233671_- | UTR3 |
| ADediting_355949 | chr12_54233696_- | UTR3 |
| ADediting_355950 | chr12_54233757_- | UTR3 |
| ADediting_355951 | chr12_54233763_- | UTR3 |
| ADediting_355952 | chr12_54233816_- | UTR3 |
| ADediting_355953 | chr12_54233829_- | UTR3 |
| ADediting_355954 | chr12_54233854_- | UTR3 |
| ADediting_355955 | chr12_54233856_- | UTR3 |
| ADediting_355956 | chr12_54233938_- | UTR3 |
| ADediting_355957 | chr12_54234014_- | UTR3 |
| ADediting_355958 | chr12_54234093_- | UTR3 |
| ADediting_355959 | chr12_54234096_- | UTR3 |
| ADediting_355960 | chr12_54234097_- | UTR3 |
| ADediting_355961 | chr12_54235358_- | UTR3 |
| ADediting_355962 | chr12_54235389_- | UTR3 |
| ADediting_355963 | chr12_54235425_- | UTR3 |
| ADediting_355964 | chr12_54235551_- | UTR3 |
| ADediting_355965 | chr12_54237935_- | UTR3 |
| ADediting_355966 | chr12_54237947_- | UTR3 |
| ADediting_355967 | chr12_54237948_- | UTR3 |
| ADediting_355968 | chr12_54237962_- | UTR3 |
| ADediting_355969 | chr12_54238068_- | UTR3 |
| ADediting_355970 | chr12_54238090_- | UTR3 |
| ADediting_355971 | chr12_54238107_- | UTR3 |
| ADediting_355972 | chr12_54238108_- | UTR3 |
| ADediting_355973 | chr12_54238164_- | UTR3 |
| ADediting_355974 | chr12_54240458_- | UTR3 |
| ADediting_355975 | chr12_54240473_- | UTR3 |
| ADediting_355976 | chr12_54240477_- | UTR3 |
| ADediting_355977 | chr12_54240491_- | UTR3 |
| ADediting_355978 | chr12_54240499_- | UTR3 |
| ADediting_355979 | chr12_54240500_- | UTR3 |
| ADediting_355980 | chr12_54240516_- | UTR3 |
| ADediting_355981 | chr12_54240518_- | UTR3 |
| ADediting_355982 | chr12_54240522_- | UTR3 |
| ADediting_355983 | chr12_54243029_- | intronic |
| ADediting_355984 | chr12_54244555_- | intronic |
| ADediting_355985 | chr12_54244707_- | intronic |
| ADediting_355986 | chr12_54245087_- | intronic |
| ADediting_355987 | chr12_54245097_- | intronic |
| ADediting_355988 | chr12_54245123_- | intronic |
| ADediting_355989 | chr12_54245175_- | intronic |
| ADediting_355990 | chr12_54245179_- | intronic |
| ADediting_355991 | chr12_54245238_- | intronic |
| ADediting_355992 | chr12_54245277_- | intronic |
| ADediting_355993 | chr12_54245284_- | intronic |
| ADediting_355994 | chr12_54246681_- | intronic |
| ADediting_355995 | chr12_54247949_- | intronic |
| ADediting_355996 | chr12_54247957_- | intronic |
| ADediting_355997 | chr12_54247965_- | intronic |
| ADediting_355998 | chr12_54247985_- | intronic |
| ADediting_355999 | chr12_54248005_- | intronic |
| ADediting_356000 | chr12_54248045_- | intronic |
| ADediting_356001 | chr12_54248208_- | intronic |
| ADediting_356002 | chr12_54253835_- | intronic |
| ADediting_356003 | chr12_54253839_- | intronic |
| ADediting_1533225 | chr12_54233674_- | UTR3 |
| ADediting_1533226 | chr12_54233855_- | UTR3 |
| ADediting_1533227 | chr12_54235421_- | UTR3 |
| ADediting_1533228 | chr12_54240467_- | UTR3 |
| ADediting_1614190 | chr12_54233686_- | UTR3 |
| ADediting_1614191 | chr12_54235393_- | UTR3 |
| ADediting_1614192 | chr12_54235396_- | UTR3 |
| ADediting_1614193 | chr12_54238052_- | UTR3 |
| ADediting_1614194 | chr12_54238187_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_355948 | chr12_54233671_- | SINE | Alu | Name=AluJo |
| ADediting_355949 | chr12_54233696_- | SINE | Alu | Name=AluJo |
| ADediting_355950 | chr12_54233757_- | SINE | Alu | Name=AluJo |
| ADediting_355951 | chr12_54233763_- | SINE | Alu | Name=AluJo |
| ADediting_355952 | chr12_54233816_- | SINE | Alu | Name=AluJo |
| ADediting_355953 | chr12_54233829_- | SINE | Alu | Name=AluJo |
| ADediting_355954 | chr12_54233854_- | SINE | Alu | Name=AluJo |
| ADediting_355955 | chr12_54233856_- | SINE | Alu | Name=AluJo |
| ADediting_355956 | chr12_54233938_- | SINE | Alu | Name=AluSg7 |
| ADediting_355957 | chr12_54234014_- | SINE | Alu | Name=AluSg7 |
| ADediting_355958 | chr12_54234093_- | SINE | Alu | Name=AluSg7 |
| ADediting_355959 | chr12_54234096_- | SINE | Alu | Name=AluSg7 |
| ADediting_355960 | chr12_54234097_- | SINE | Alu | Name=AluSg7 |
| ADediting_355961 | chr12_54235358_- | SINE | Alu | Name=AluY |
| ADediting_355962 | chr12_54235389_- | SINE | Alu | Name=AluY |
| ADediting_355963 | chr12_54235425_- | SINE | Alu | Name=AluY |
| ADediting_355964 | chr12_54235551_- | SINE | Alu | Name=AluY |
| ADediting_355965 | chr12_54237935_- | SINE | Alu | Name=AluSc |
| ADediting_355966 | chr12_54237947_- | SINE | Alu | Name=AluSc |
| ADediting_355967 | chr12_54237948_- | SINE | Alu | Name=AluSc |
| ADediting_355968 | chr12_54237962_- | SINE | Alu | Name=AluSc |
| ADediting_355969 | chr12_54238068_- | SINE | Alu | Name=AluSc |
| ADediting_355970 | chr12_54238090_- | SINE | Alu | Name=AluSc |
| ADediting_355971 | chr12_54238107_- | SINE | Alu | Name=AluSc |
| ADediting_355972 | chr12_54238108_- | SINE | Alu | Name=AluSc |
| ADediting_355973 | chr12_54238164_- | SINE | Alu | Name=AluSc |
| ADediting_355974 | chr12_54240458_- | SINE | Alu | Name=AluJr |
| ADediting_355975 | chr12_54240473_- | SINE | Alu | Name=AluJr |
| ADediting_355976 | chr12_54240477_- | SINE | Alu | Name=AluJr |
| ADediting_355977 | chr12_54240491_- | SINE | Alu | Name=AluJr |
| ADediting_355978 | chr12_54240499_- | SINE | Alu | Name=AluJr |
| ADediting_355979 | chr12_54240500_- | SINE | Alu | Name=AluJr |
| ADediting_355980 | chr12_54240516_- | SINE | Alu | Name=AluJr |
| ADediting_355981 | chr12_54240518_- | SINE | Alu | Name=AluJr |
| ADediting_355982 | chr12_54240522_- | SINE | Alu | Name=AluJr |
| ADediting_355983 | chr12_54243029_- | SINE | Alu | Name=AluJb |
| ADediting_355984 | chr12_54244555_- | SINE | Alu | Name=AluSx1 |
| ADediting_355985 | chr12_54244707_- | SINE | Alu | Name=AluSx1 |
| ADediting_355986 | chr12_54245087_- | SINE | Alu | Name=AluSz |
| ADediting_355987 | chr12_54245097_- | SINE | Alu | Name=AluSz |
| ADediting_355988 | chr12_54245123_- | SINE | Alu | Name=AluSz |
| ADediting_355989 | chr12_54245175_- | SINE | Alu | Name=AluSz |
| ADediting_355990 | chr12_54245179_- | SINE | Alu | Name=AluSz |
| ADediting_355991 | chr12_54245238_- | SINE | Alu | Name=AluSz |
| ADediting_355992 | chr12_54245277_- | SINE | Alu | Name=AluSz |
| ADediting_355993 | chr12_54245284_- | SINE | Alu | Name=AluSz |
| ADediting_355994 | chr12_54246681_- | SINE | Alu | Name=AluSx3 |
| ADediting_355995 | chr12_54247949_- | SINE | Alu | Name=AluSx |
| ADediting_355996 | chr12_54247957_- | SINE | Alu | Name=AluSx |
| ADediting_355997 | chr12_54247965_- | SINE | Alu | Name=AluSx |
| ADediting_355998 | chr12_54247985_- | SINE | Alu | Name=AluSx |
| ADediting_355999 | chr12_54248005_- | SINE | Alu | Name=AluSx |
| ADediting_356000 | chr12_54248045_- | SINE | Alu | Name=AluSx |
| ADediting_356001 | chr12_54248208_- | SINE | Alu | Name=AluSx1 |
| ADediting_356002 | chr12_54253835_- | SINE | Alu | Name=AluSz |
| ADediting_356003 | chr12_54253839_- | SINE | Alu | Name=AluSz |
| ADediting_1533225 | chr12_54233674_- | SINE | Alu | Name=AluJo |
| ADediting_1533226 | chr12_54233855_- | SINE | Alu | Name=AluJo |
| ADediting_1533227 | chr12_54235421_- | SINE | Alu | Name=AluY |
| ADediting_1533228 | chr12_54240467_- | SINE | Alu | Name=AluJr |
| ADediting_1614190 | chr12_54233686_- | SINE | Alu | Name=AluJo |
| ADediting_1614191 | chr12_54235393_- | SINE | Alu | Name=AluY |
| ADediting_1614192 | chr12_54235396_- | SINE | Alu | Name=AluY |
| ADediting_1614193 | chr12_54238052_- | SINE | Alu | Name=AluSc |
| ADediting_1614194 | chr12_54238187_- | SINE | Alu | Name=AluSc |
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RNA A-to-I editing events in the alternative splicing sites for CBX5 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CBX5 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for CBX5 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for CBX5 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1533225 | chr12_54233674_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-106a-3p | chr12 | 54233671 | 54233677 | 7mer-1a | 54233671 | 54233692 | 141 | -16.54 |
| ADediting_1533225 | chr12_54233674_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4327 | chr12 | 54233668 | 54233675 | 8mer-1a | 54233668 | 54233686 | 140 | -13.39 |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1199-5p | chr12 | 54233854 | 54233861 | 8mer-1a | 54233854 | 54233873 | 156 | -23.88 |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3200-5p | chr12 | 54233853 | 54233859 | 7mer-m8 | 54233852 | 54233875 | 141 | -18.5 |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4303 | chr12 | 54233854 | 54233860 | 7mer-m8 | 54233853 | 54233869 | 158 | -19.65 |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-452-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233873 | 143 | -12.19 |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6751-3p | chr12 | 54233854 | 54233861 | 8mer-1a | 54233854 | 54233874 | 141 | -13.24 |
| ADediting_1614190 | chr12_54233686_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3189-3p | chr12 | 54233685 | 54233691 | 7mer-m8 | 54233684 | 54233703 | 149 | -23.55 |
| ADediting_1614190 | chr12_54233686_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6813-3p | chr12 | 54233684 | 54233690 | 7mer-m8 | 54233683 | 54233703 | 140 | -10.68 |
| ADediting_1614191 | chr12_54235393_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3619-3p | chr12 | 54235389 | 54235396 | 8mer-1a | 54235389 | 54235410 | 140 | -13.38 |
| ADediting_1614191 | chr12_54235393_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4776-5p | chr12 | 54235389 | 54235395 | 7mer-m8 | 54235388 | 54235409 | 164 | -25.69 |
| ADediting_1614191 | chr12_54235393_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4800-5p | chr12 | 54235388 | 54235394 | 7mer-m8 | 54235387 | 54235410 | 155 | -25.66 |
| ADediting_1614191 | chr12_54235393_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-591 | chr12 | 54235391 | 54235397 | 7mer-m8 | 54235390 | 54235409 | 153 | -16.12 |
| ADediting_1614193 | chr12_54238052_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-564 | chr12 | 54238048 | 54238054 | 7mer-m8 | 54238047 | 54238066 | 159 | -24.31 |
| ADediting_1614194 | chr12_54238187_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3613-3p | chr12 | 54238187 | 54238193 | 7mer-m8 | 54238186 | 54238209 | 154 | -5.52 |
| ADediting_355948 | chr12_54233671_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4633-5p | chr12 | 54233665 | 54233672 | 8mer-1a | 54233665 | 54233682 | 151 | -15.91 |
| ADediting_355948 | chr12_54233671_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6514-3p | chr12 | 54233668 | 54233674 | 7mer-m8 | 54233667 | 54233687 | 155 | -17.54 |
| ADediting_355949 | chr12_54233696_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6089 | chr12 | 54233691 | 54233697 | 7mer-m8 | 54233690 | 54233712 | 156 | -34.29 |
| ADediting_355950 | chr12_54233757_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-340-3p | chr12 | 54233756 | 54233762 | 7mer-m8 | 54233755 | 54233780 | 147 | -15.17 |
| ADediting_355950 | chr12_54233757_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6827-3p | chr12 | 54233756 | 54233762 | 7mer-m8 | 54233755 | 54233775 | 147 | -18.07 |
| ADediting_355952 | chr12_54233816_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-17-3p | chr12 | 54233813 | 54233819 | 7mer-m8 | 54233812 | 54233834 | 150 | -20.08 |
| ADediting_355953 | chr12_54233829_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-661 | chr12 | 54233826 | 54233833 | 8mer-1a | 54233826 | 54233849 | 147 | -25.03 |
| ADediting_355953 | chr12_54233829_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6882-3p | chr12 | 54233824 | 54233830 | 7mer-m8 | 54233823 | 54233846 | 140 | -18.29 |
| ADediting_355955 | chr12_54233856_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1298-5p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233869 | 154 | -20.86 |
| ADediting_355962 | chr12_54235389_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1228-5p | chr12 | 54235385 | 54235391 | 7mer-m8 | 54235384 | 54235403 | 143 | -25.76 |
| ADediting_355963 | chr12_54235425_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3190-5p | chr12 | 54235420 | 54235426 | 7mer-m8 | 54235419 | 54235438 | 155 | -18.34 |
| ADediting_355963 | chr12_54235425_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-548s | chr12 | 54235421 | 54235427 | 7mer-m8 | 54235420 | 54235444 | 144 | -17.11 |
| ADediting_355964 | chr12_54235551_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-17-3p | chr12 | 54235551 | 54235557 | 7mer-m8 | 54235550 | 54235571 | 150 | -17.09 |
| ADediting_355964 | chr12_54235551_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-596 | chr12 | 54235548 | 54235554 | 7mer-m8 | 54235547 | 54235567 | 140 | -18.43 |
| ADediting_355966 | chr12_54237947_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3189-3p | chr12 | 54237946 | 54237952 | 7mer-m8 | 54237945 | 54237964 | 145 | -19.31 |
| ADediting_355966 | chr12_54237947_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6813-3p | chr12 | 54237945 | 54237951 | 7mer-m8 | 54237944 | 54237964 | 140 | -16.1 |
| ADediting_355967 | chr12_54237948_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3192-5p | chr12 | 54237947 | 54237954 | 8mer-1a | 54237947 | 54237966 | 156 | -25.88 |
| ADediting_355967 | chr12_54237948_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-326 | chr12 | 54237946 | 54237952 | 7mer-m8 | 54237945 | 54237964 | 140 | -14.14 |
| ADediting_355967 | chr12_54237948_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-330-5p | chr12 | 54237946 | 54237952 | 7mer-m8 | 54237945 | 54237966 | 140 | -21.34 |
| ADediting_355967 | chr12_54237948_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4314 | chr12 | 54237947 | 54237953 | 7mer-m8 | 54237946 | 54237963 | 140 | -18.8 |
| ADediting_355967 | chr12_54237948_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-514a-5p | chr12 | 54237945 | 54237951 | 7mer-m8 | 54237944 | 54237964 | 154 | -19.44 |
| ADediting_355968 | chr12_54237962_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-7112-5p | chr12 | 54237962 | 54237968 | 7mer-m8 | 54237961 | 54237982 | 148 | -19.81 |
| ADediting_355969 | chr12_54238068_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-17-3p | chr12 | 54238065 | 54238071 | 7mer-m8 | 54238064 | 54238086 | 154 | -22.02 |
| ADediting_355970 | chr12_54238090_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6089 | chr12 | 54238085 | 54238091 | 7mer-m8 | 54238084 | 54238107 | 164 | -37.06 |
| ADediting_355971 | chr12_54238107_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6078 | chr12 | 54238103 | 54238110 | 8mer-1a | 54238103 | 54238122 | 148 | -20.43 |
| ADediting_355973 | chr12_54238164_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3940-3p | chr12 | 54238160 | 54238166 | 7mer-m8 | 54238159 | 54238179 | 145 | -22.2 |
| ADediting_355973 | chr12_54238164_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4783-3p | chr12 | 54238162 | 54238168 | 7mer-m8 | 54238161 | 54238183 | 169 | -27.99 |
| ADediting_355974 | chr12_54240458_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3176 | chr12 | 54240452 | 54240459 | 8mer-1a | 54240452 | 54240470 | 143 | -15.07 |
| ADediting_355974 | chr12_54240458_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3922-3p | chr12 | 54240452 | 54240459 | 8mer-1a | 54240452 | 54240472 | 154 | -18.86 |
| ADediting_355974 | chr12_54240458_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6878-3p | chr12 | 54240454 | 54240460 | 7mer-m8 | 54240453 | 54240475 | 154 | -27.88 |
| ADediting_355976 | chr12_54240477_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1913 | chr12 | 54240472 | 54240478 | 7mer-m8 | 54240471 | 54240498 | 149 | -27.64 |
| ADediting_355976 | chr12_54240477_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6849-3p | chr12 | 54240477 | 54240483 | 7mer-m8 | 54240476 | 54240497 | 140 | -18.02 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-518a-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240507 | 145 | -17.15 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-518b | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240506 | 146 | -21.79 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-518c-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240507 | 146 | -18.98 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-518d-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240506 | 145 | -17.84 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-518e-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240508 | 144 | -17.66 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-518f-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240506 | 145 | -17.48 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-526a-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240506 | 146 | -17.71 |
| ADediting_355978 | chr12_54240499_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-8052 | chr12 | 54240494 | 54240500 | 7mer-1a | 54240494 | 54240515 | 141 | -22.09 |
| ADediting_355979 | chr12_54240500_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-513a-5p | chr12 | 54240499 | 54240505 | 7mer-m8 | 54240498 | 54240514 | 146 | -19.94 |
| ADediting_355979 | chr12_54240500_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-638 | chr12 | 54240494 | 54240500 | 7mer-1a | 54240494 | 54240517 | 165 | -38.1 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6720-3p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240539 | 149 | -15.06 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-579-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233872 | 141 | -11.91 |
| ADediting_1533226 | chr12_54233855_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-664b-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233870 | 150 | -16.43 |
| ADediting_1533227 | chr12_54235421_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4794 | chr12 | 54235420 | 54235426 | 7mer-m8 | 54235419 | 54235439 | 144 | -17.45 |
| ADediting_1533227 | chr12_54235421_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-664a-5p | chr12 | 54235420 | 54235426 | 7mer-m8 | 54235419 | 54235441 | 148 | -15.43 |
| ADediting_1533228 | chr12_54240467_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5571-5p | chr12 | 54240465 | 54240471 | 7mer-m8 | 54240464 | 54240486 | 142 | -26.87 |
| ADediting_1614193 | chr12_54238052_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3622b-5p | chr12 | 54238048 | 54238054 | 7mer-m8 | 54238047 | 54238066 | 143 | -17.47 |
| ADediting_1614193 | chr12_54238052_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4253 | chr12 | 54238046 | 54238053 | 8mer-1a | 54238046 | 54238063 | 140 | -14.06 |
| ADediting_355949 | chr12_54233696_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4478 | chr12 | 54233692 | 54233698 | 7mer-m8 | 54233691 | 54233707 | 146 | -19.65 |
| ADediting_355949 | chr12_54233696_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4649-3p | chr12 | 54233695 | 54233701 | 7mer-m8 | 54233694 | 54233714 | 143 | -15.51 |
| ADediting_355949 | chr12_54233696_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-485-5p | chr12 | 54233691 | 54233697 | 7mer-m8 | 54233690 | 54233711 | 153 | -21.14 |
| ADediting_355949 | chr12_54233696_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-7160-5p | chr12 | 54233694 | 54233700 | 7mer-m8 | 54233693 | 54233714 | 151 | -19.87 |
| ADediting_355950 | chr12_54233757_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6818-3p | chr12 | 54233757 | 54233763 | 7mer-m8 | 54233756 | 54233777 | 140 | -11.47 |
| ADediting_355950 | chr12_54233757_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-873-3p | chr12 | 54233752 | 54233758 | 7mer-m8 | 54233751 | 54233772 | 140 | -17.92 |
| ADediting_355951 | chr12_54233763_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1283 | chr12 | 54233761 | 54233768 | 8mer-1a | 54233761 | 54233782 | 143 | -10.54 |
| ADediting_355951 | chr12_54233763_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4684-5p | chr12 | 54233759 | 54233765 | 7mer-m8 | 54233758 | 54233779 | 143 | -10.02 |
| ADediting_355951 | chr12_54233763_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-519a-2-5p | chr12 | 54233759 | 54233766 | 8mer-1a | 54233759 | 54233776 | 147 | -12.91 |
| ADediting_355951 | chr12_54233763_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520b-5p | chr12 | 54233759 | 54233766 | 8mer-1a | 54233759 | 54233776 | 147 | -12.91 |
| ADediting_355952 | chr12_54233816_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-20b-3p | chr12 | 54233813 | 54233819 | 7mer-m8 | 54233812 | 54233834 | 149 | -17.85 |
| ADediting_355953 | chr12_54233829_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-887-5p | chr12 | 54233829 | 54233835 | 7mer-m8 | 54233828 | 54233847 | 143 | -19.73 |
| ADediting_355954 | chr12_54233854_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-579-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233872 | 141 | -11.91 |
| ADediting_355954 | chr12_54233854_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-664b-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233870 | 150 | -16.43 |
| ADediting_355955 | chr12_54233856_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-579-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233872 | 141 | -11.91 |
| ADediting_355955 | chr12_54233856_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-664b-3p | chr12 | 54233851 | 54233857 | 7mer-m8 | 54233850 | 54233870 | 150 | -16.43 |
| ADediting_355957 | chr12_54234014_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-593-3p | chr12 | 54234008 | 54234014 | 7mer-1a | 54234008 | 54234026 | 140 | -19.02 |
| ADediting_355962 | chr12_54235389_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3165 | chr12 | 54235387 | 54235393 | 7mer-m8 | 54235386 | 54235405 | 144 | -14.17 |
| ADediting_355962 | chr12_54235389_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6748-5p | chr12 | 54235384 | 54235390 | 7mer-m8 | 54235383 | 54235408 | 154 | -23.43 |
| ADediting_355962 | chr12_54235389_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6756-5p | chr12 | 54235385 | 54235391 | 7mer-1a | 54235385 | 54235407 | 153 | -29.96 |
| ADediting_355963 | chr12_54235425_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4794 | chr12 | 54235420 | 54235426 | 7mer-m8 | 54235419 | 54235439 | 144 | -17.45 |
| ADediting_355963 | chr12_54235425_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-664a-5p | chr12 | 54235420 | 54235426 | 7mer-m8 | 54235419 | 54235441 | 148 | -15.43 |
| ADediting_355964 | chr12_54235551_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4327 | chr12 | 54235549 | 54235555 | 7mer-m8 | 54235548 | 54235567 | 147 | -17.64 |
| ADediting_355964 | chr12_54235551_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6516-5p | chr12 | 54235551 | 54235557 | 7mer-m8 | 54235550 | 54235572 | 144 | -17.11 |
| ADediting_355967 | chr12_54237948_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-887-5p | chr12 | 54237947 | 54237954 | 8mer-1a | 54237947 | 54237967 | 147 | -13.99 |
| ADediting_355968 | chr12_54237962_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4761-5p | chr12 | 54237957 | 54237963 | 7mer-m8 | 54237956 | 54237976 | 152 | -14.62 |
| ADediting_355968 | chr12_54237962_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-541-3p | chr12 | 54237960 | 54237966 | 7mer-m8 | 54237959 | 54237985 | 154 | -21.96 |
| ADediting_355968 | chr12_54237962_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-654-5p | chr12 | 54237960 | 54237966 | 7mer-m8 | 54237959 | 54237979 | 149 | -18.08 |
| ADediting_355969 | chr12_54238068_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-20b-3p | chr12 | 54238065 | 54238071 | 7mer-m8 | 54238064 | 54238086 | 153 | -16.84 |
| ADediting_355970 | chr12_54238090_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4478 | chr12 | 54238086 | 54238092 | 7mer-m8 | 54238085 | 54238100 | 149 | -25.05 |
| ADediting_355970 | chr12_54238090_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4649-3p | chr12 | 54238089 | 54238095 | 7mer-m8 | 54238088 | 54238108 | 140 | -14.11 |
| ADediting_355970 | chr12_54238090_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-7160-5p | chr12 | 54238088 | 54238094 | 7mer-m8 | 54238087 | 54238107 | 146 | -20.4 |
| ADediting_355974 | chr12_54240458_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-498-5p | chr12 | 54240458 | 54240464 | 7mer-m8 | 54240457 | 54240479 | 142 | -13.07 |
| ADediting_355975 | chr12_54240473_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1976 | chr12 | 54240468 | 54240475 | 8mer-1a | 54240468 | 54240488 | 149 | -21.37 |
| ADediting_355975 | chr12_54240473_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6747-3p | chr12 | 54240470 | 54240477 | 8mer-1a | 54240470 | 54240491 | 150 | -24.16 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-302a-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240508 | 143 | -13.99 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-302b-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240509 | 141 | -9.54 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-302c-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240507 | 145 | -11.96 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-302d-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240509 | 141 | -10.95 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-302e | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240503 | 141 | -8.62 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-372-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240507 | 153 | -17.34 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-512-3p | chr12 | 54240489 | 54240495 | 7mer-m8 | 54240488 | 54240509 | 149 | -15.54 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-519d-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240506 | 146 | -14.53 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520a-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240508 | 140 | -11.03 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520b-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240506 | 141 | -16.52 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520c-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240507 | 146 | -16.52 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520d-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240510 | 143 | -18.64 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520e-3p | chr12 | 54240488 | 54240494 | 7mer-m8 | 54240487 | 54240507 | 140 | -13.32 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520g-3p | chr12 | 54240486 | 54240492 | 7mer-m8 | 54240485 | 54240507 | 151 | -16.77 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-520h | chr12 | 54240486 | 54240492 | 7mer-m8 | 54240485 | 54240506 | 150 | -15.08 |
| ADediting_355977 | chr12_54240491_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-526b-3p | chr12 | 54240487 | 54240493 | 7mer-m8 | 54240486 | 54240506 | 146 | -16.66 |
| ADediting_355978 | chr12_54240499_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-10399-5p | chr12 | 54240498 | 54240504 | 7mer-m8 | 54240497 | 54240517 | 145 | -9.05 |
| ADediting_355978 | chr12_54240499_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5089-5p | chr12 | 54240494 | 54240500 | 7mer-m8 | 54240493 | 54240515 | 153 | -17.97 |
| ADediting_355978 | chr12_54240499_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6504-3p | chr12 | 54240498 | 54240504 | 7mer-m8 | 54240497 | 54240518 | 152 | -15.12 |
| ADediting_355979 | chr12_54240500_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-10399-5p | chr12 | 54240498 | 54240504 | 7mer-m8 | 54240497 | 54240517 | 145 | -9.05 |
| ADediting_355979 | chr12_54240500_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6504-3p | chr12 | 54240498 | 54240504 | 7mer-m8 | 54240497 | 54240518 | 152 | -15.12 |
| ADediting_355979 | chr12_54240500_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-7151-3p | chr12 | 54240499 | 54240506 | 8mer-1a | 54240499 | 54240523 | 145 | -17.99 |
| ADediting_355980 | chr12_54240516_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4252 | chr12 | 54240511 | 54240517 | 7mer-m8 | 54240510 | 54240528 | 150 | -19.47 |
| ADediting_355980 | chr12_54240516_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-550b-2-5p | chr12 | 54240516 | 54240522 | 7mer-m8 | 54240515 | 54240535 | 150 | -16.21 |
| ADediting_355980 | chr12_54240516_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6529-3p | chr12 | 54240515 | 54240521 | 7mer-m8 | 54240514 | 54240535 | 145 | -13.3 |
| ADediting_355980 | chr12_54240516_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6889-3p | chr12 | 54240515 | 54240521 | 7mer-m8 | 54240514 | 54240533 | 140 | -13.64 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1271-3p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240538 | 152 | -18.33 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-550a-3-5p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240535 | 142 | -14.22 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-550a-5p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240537 | 145 | -16.78 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-550b-2-5p | chr12 | 54240516 | 54240522 | 7mer-m8 | 54240515 | 54240535 | 150 | -16.21 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6529-3p | chr12 | 54240515 | 54240521 | 7mer-m8 | 54240514 | 54240535 | 145 | -13.3 |
| ADediting_355981 | chr12_54240518_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-6889-3p | chr12 | 54240515 | 54240521 | 7mer-m8 | 54240514 | 54240533 | 140 | -13.64 |
| ADediting_355982 | chr12_54240522_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1271-3p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240538 | 152 | -18.33 |
| ADediting_355982 | chr12_54240522_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3187-3p | chr12 | 54240522 | 54240528 | 7mer-m8 | 54240521 | 54240540 | 153 | -20.51 |
| ADediting_355982 | chr12_54240522_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-3190-5p | chr12 | 54240521 | 54240527 | 7mer-m8 | 54240520 | 54240539 | 141 | -15.12 |
| ADediting_355982 | chr12_54240522_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-550a-3-5p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240535 | 142 | -14.22 |
| ADediting_355982 | chr12_54240522_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-550a-5p | chr12 | 54240516 | 54240523 | 8mer-1a | 54240516 | 54240537 | 145 | -16.78 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5688 | chr12 | 54233394 | 54233400 | 7mer-m8 | 54233393 | 54233414 | 155 | -17.77 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5688 | chr12 | 54234403 | 54234410 | 8mer-1a | 54234403 | 54234426 | 142 | -18.34 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54232592 | 54232598 | 7mer-m8 | 54232591 | 54232614 | 143 | -22.36 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54235075 | 54235081 | 7mer-m8 | 54235074 | 54235099 | 154 | -21.97 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54235595 | 54235601 | 7mer-m8 | 54235594 | 54235618 | 162 | -21.11 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54237795 | 54237801 | 7mer-m8 | 54237794 | 54237817 | 145 | -14.97 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-151a-3p | chr12 | 54236947 | 54236953 | 7mer-m8 | 54236946 | 54236966 | 140 | -13.45 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-151a-3p | chr12 | 54239940 | 54239946 | 7mer-m8 | 54239939 | 54239961 | 156 | -16.94 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4477b | chr12 | 54232539 | 54232545 | 7mer-m8 | 54232538 | 54232559 | 140 | -9.77 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-337-3p | chr12 | 54231326 | 54231332 | 7mer-m8 | 54231325 | 54231346 | 149 | -10.44 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-381-3p | chr12 | 54232154 | 54232160 | 7mer-m8 | 54232153 | 54232177 | 149 | -13.84 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-381-3p | chr12 | 54237697 | 54237703 | 7mer-m8 | 54237696 | 54237719 | 150 | -17.32 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-641 | chr12 | 54240640 | 54240646 | 7mer-m8 | 54240639 | 54240664 | 153 | -16.68 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000094916.16 | ENST00000439541.6 | CBX5-202 | hsa-miR-641 | chr12 | 54240640 | 54240646 | 7mer-m8 | 54240639 | 54240664 | 153 | -16.68 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-641 | chr12 | 54232804 | 54232810 | 7mer-m8 | 54232803 | 54232825 | 147 | -15.25 |
| ADediting_286380 | chr11_79422188_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5579-3p | chr12 | 54233661 | 54233667 | 7mer-m8 | 54233660 | 54233685 | 149 | -15.26 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4775 | chr12 | 54238681 | 54238687 | 7mer-m8 | 54238680 | 54238704 | 149 | -13.12 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5585-3p | chr12 | 54231754 | 54231760 | 7mer-m8 | 54231753 | 54231775 | 147 | -15 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5585-3p | chr12 | 54239901 | 54239907 | 7mer-m8 | 54239900 | 54239921 | 143 | -10 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54233455 | 54233461 | 7mer-m8 | 54233454 | 54233477 | 140 | -15.47 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54236457 | 54236464 | 8mer-1a | 54236457 | 54236480 | 140 | -12.13 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54236965 | 54236971 | 7mer-m8 | 54236964 | 54236990 | 152 | -12.99 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-3p | chr12 | 54239306 | 54239312 | 7mer-1a | 54239306 | 54239329 | 142 | -21.77 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-5p | chr12 | 54231488 | 54231494 | 7mer-m8 | 54231487 | 54231509 | 149 | -17.72 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-589-5p | chr12 | 54241602 | 54241608 | 7mer-m8 | 54241601 | 54241622 | 145 | -12.1 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000094916.16 | ENST00000439541.6 | CBX5-202 | hsa-miR-589-5p | chr12 | 54241602 | 54241608 | 7mer-m8 | 54241601 | 54241622 | 145 | -12.1 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4477b | chr12 | 54231769 | 54231776 | 8mer-1a | 54231769 | 54231792 | 149 | -8.96 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4477b | chr12 | 54231769 | 54231776 | 8mer-1a | 54231769 | 54231792 | 149 | -8.96 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-337-3p | chr12 | 54239090 | 54239097 | 8mer-1a | 54239090 | 54239111 | 144 | -12.06 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-381-3p | chr12 | 54230974 | 54230980 | 7mer-m8 | 54230973 | 54230994 | 150 | -12.04 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-381-3p | chr12 | 54235260 | 54235267 | 8mer-1a | 54235260 | 54235283 | 146 | -15.85 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-381-3p | chr12 | 54230974 | 54230980 | 7mer-m8 | 54230973 | 54230994 | 150 | -12.04 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-381-3p | chr12 | 54235260 | 54235267 | 8mer-1a | 54235260 | 54235283 | 146 | -15.85 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-641 | chr12 | 54232373 | 54232379 | 7mer-m8 | 54232372 | 54232396 | 147 | -18.31 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-556-3p | chr12 | 54239267 | 54239273 | 7mer-m8 | 54239266 | 54239288 | 154 | -12.56 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-641 | chr12 | 54232373 | 54232379 | 7mer-m8 | 54232372 | 54232396 | 147 | -18.31 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5682 | chr12 | 54233022 | 54233028 | 7mer-m8 | 54233021 | 54233040 | 151 | -16.35 |
| ADediting_286380 | chr11_79422188_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-5579-3p | chr12 | 54238516 | 54238523 | 8mer-1a | 54238516 | 54238537 | 155 | -15.7 |
| ADediting_291761 | chr11_93733708_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1304-3p | chr12 | 54234272 | 54234278 | 7mer-m8 | 54234271 | 54234293 | 151 | -19.23 |
| ADediting_496066 | chr15_66496985_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4512 | chr12 | 54232697 | 54232703 | 7mer-m8 | 54232696 | 54232716 | 146 | -15.63 |
| ADediting_496066 | chr15_66496985_- | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4512 | chr12 | 54240342 | 54240348 | 7mer-m8 | 54240341 | 54240364 | 149 | -23.61 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1273h-3p | chr12 | 54231719 | 54231725 | 7mer-m8 | 54231718 | 54231739 | 144 | -17.32 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-1273h-3p | chr12 | 54237404 | 54237411 | 8mer-1a | 54237404 | 54237428 | 146 | -18.93 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4775 | chr12 | 54236507 | 54236513 | 7mer-m8 | 54236506 | 54236528 | 155 | -5.85 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000094916.16 | ENST00000209875.9 | CBX5-201 | hsa-miR-4775 | chr12 | 54239824 | 54239830 | 7mer-m8 | 54239823 | 54239844 | 148 | -3.68 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for CBX5 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000209875.9 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_355948 | ENST00000209875.9 | chr12_54233671_- | 8817 | -3434.10 | -3427.50 | -3484.10 |
| ADediting_1533225 | ENST00000209875.9 | chr12_54233674_- | 8814 | -3427.50 | -3427.50 | -3484.10 |
| ADediting_1614190 | ENST00000209875.9 | chr12_54233686_- | 8802 | -3427.20 | -3427.50 | -3484.10 |
| ADediting_355949 | ENST00000209875.9 | chr12_54233696_- | 8792 | -3426.80 | -3427.50 | -3484.10 |
| ADediting_355950 | ENST00000209875.9 | chr12_54233757_- | 8731 | -3429.90 | -3427.50 | -3484.10 |
| ADediting_355951 | ENST00000209875.9 | chr12_54233763_- | 8725 | -3428.00 | -3427.50 | -3484.10 |
| ADediting_355952 | ENST00000209875.9 | chr12_54233816_- | 8672 | -3431.10 | -3427.50 | -3484.10 |
| ADediting_355953 | ENST00000209875.9 | chr12_54233829_- | 8659 | -3431.80 | -3427.50 | -3484.10 |
| ADediting_355954 | ENST00000209875.9 | chr12_54233854_- | 8634 | -3431.90 | -3427.50 | -3484.10 |
| ADediting_1533226 | ENST00000209875.9 | chr12_54233855_- | 8633 | -3431.10 | -3427.50 | -3484.10 |
| ADediting_355955 | ENST00000209875.9 | chr12_54233856_- | 8632 | -3428.40 | -3427.50 | -3484.10 |
| ADediting_355956 | ENST00000209875.9 | chr12_54233938_- | 8550 | -3427.40 | -3427.50 | -3484.10 |
| ADediting_355957 | ENST00000209875.9 | chr12_54234014_- | 8474 | -3427.70 | -3427.50 | -3484.10 |
| ADediting_355958 | ENST00000209875.9 | chr12_54234093_- | 8395 | -3426.80 | -3427.50 | -3484.10 |
| ADediting_355959 | ENST00000209875.9 | chr12_54234096_- | 8392 | -3431.70 | -3427.50 | -3484.10 |
| ADediting_355960 | ENST00000209875.9 | chr12_54234097_- | 8391 | -3430.60 | -3427.50 | -3484.10 |
| ADediting_355961 | ENST00000209875.9 | chr12_54235358_- | 7130 | -3427.50 | -3427.50 | -3484.10 |
| ADediting_355962 | ENST00000209875.9 | chr12_54235389_- | 7099 | -3427.10 | -3427.50 | -3484.10 |
| ADediting_1614191 | ENST00000209875.9 | chr12_54235393_- | 7095 | -3432.30 | -3427.50 | -3484.10 |
| ADediting_1614192 | ENST00000209875.9 | chr12_54235396_- | 7092 | -3428.50 | -3427.50 | -3484.10 |
| ADediting_1533227 | ENST00000209875.9 | chr12_54235421_- | 7067 | -3429.50 | -3427.50 | -3484.10 |
| ADediting_355963 | ENST00000209875.9 | chr12_54235425_- | 7063 | -3428.00 | -3427.50 | -3484.10 |
| ADediting_355964 | ENST00000209875.9 | chr12_54235551_- | 6937 | -3427.50 | -3427.50 | -3484.10 |
| ADediting_355965 | ENST00000209875.9 | chr12_54237935_- | 4553 | -3427.40 | -3427.50 | -3484.10 |
| ADediting_355966 | ENST00000209875.9 | chr12_54237947_- | 4541 | -3431.00 | -3427.50 | -3484.10 |
| ADediting_355967 | ENST00000209875.9 | chr12_54237948_- | 4540 | -3428.60 | -3427.50 | -3484.10 |
| ADediting_355968 | ENST00000209875.9 | chr12_54237962_- | 4526 | -3427.10 | -3427.50 | -3484.10 |
| ADediting_1614193 | ENST00000209875.9 | chr12_54238052_- | 4436 | -3429.20 | -3427.50 | -3484.10 |
| ADediting_355969 | ENST00000209875.9 | chr12_54238068_- | 4420 | -3428.00 | -3427.50 | -3484.10 |
| ADediting_355970 | ENST00000209875.9 | chr12_54238090_- | 4398 | -3428.70 | -3427.50 | -3484.10 |
| ADediting_355971 | ENST00000209875.9 | chr12_54238107_- | 4381 | -3432.10 | -3427.50 | -3484.10 |
| ADediting_355972 | ENST00000209875.9 | chr12_54238108_- | 4380 | -3426.80 | -3427.50 | -3484.10 |
| ADediting_355973 | ENST00000209875.9 | chr12_54238164_- | 4324 | -3426.80 | -3427.50 | -3484.10 |
| ADediting_1614194 | ENST00000209875.9 | chr12_54238187_- | 4301 | -3427.40 | -3427.50 | -3484.10 |
| ADediting_355974 | ENST00000209875.9 | chr12_54240458_- | 2030 | -3428.90 | -3427.50 | -3484.10 |
| ADediting_1533228 | ENST00000209875.9 | chr12_54240467_- | 2021 | -3427.80 | -3427.50 | -3484.10 |
| ADediting_355975 | ENST00000209875.9 | chr12_54240473_- | 2015 | -3426.80 | -3427.50 | -3484.10 |
| ADediting_355976 | ENST00000209875.9 | chr12_54240477_- | 2011 | -3426.60 | -3427.50 | -3484.10 |
| ADediting_355977 | ENST00000209875.9 | chr12_54240491_- | 1997 | -3427.10 | -3427.50 | -3484.10 |
| ADediting_355978 | ENST00000209875.9 | chr12_54240499_- | 1989 | -3427.50 | -3427.50 | -3484.10 |
| ADediting_355979 | ENST00000209875.9 | chr12_54240500_- | 1988 | -3427.60 | -3427.50 | -3484.10 |
| ADediting_355980 | ENST00000209875.9 | chr12_54240516_- | 1972 | -3433.70 | -3427.50 | -3484.10 |
| ADediting_355981 | ENST00000209875.9 | chr12_54240518_- | 1970 | -3432.30 | -3427.50 | -3484.10 |
| ADediting_355982 | ENST00000209875.9 | chr12_54240522_- | 1966 | -3433.70 | -3427.50 | -3484.10 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CBX5 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_355975 | chr12_54240473_- | 0.000291961501606586 | 0.291741828587412 | 1.68142815996137e-11 | 0.514264807870301 | 0.0276052245385717 | 0.179896967392348 |
| STG | ADediting_355979 | chr12_54240500_- | 0.720177273749349 | 0.0396641470635373 | 0.876098625331671 | 0.0172694109927543 | 0.00139643903143784 | 0.343136808715375 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.41118213370986e-75 | 0.816856975911437 | 4.24074909715931e-37 | 0.639850515031602 | 9.77430589393819e-14 | 0.406071463637675 |
| AC | 1.8438344882145e-59 | 0.810183815310208 | 5.2427628198309e-42 | 0.724769411812033 | 0.00163800768228026 | 0.198177687659313 |
| PCC | 4.62321694609011e-40 | 0.778336339531418 | 2.50153279191577e-31 | 0.71606886071853 | 0.00085481413698624 | 0.239324390851257 |
| CER | 1.94645764376527e-79 | 0.954174703590879 | 1.65459989594783e-46 | 0.866501533812332 | 0.000277946946539728 | 0.292719717433053 |
| TCX | 1.08334661527417e-37 | 0.820009558893701 | 1.83021698687533e-08 | 0.439542142865474 | 2.28416814181233e-09 | 0.463719048407704 |
| FP | 2.18890367427762e-40 | 0.796972384228331 | 1.17853274267363e-18 | 0.598179382720132 | 7.24447468552192e-10 | 0.440981507399578 |
| IFG | 2.23505336604589e-10 | 0.912041844979288 | 4.72893872690964e-07 | 0.82180047737214 | 0.0710494726315917 | 0.367101619988562 |
| PG | 1.2606397658903e-51 | 0.843823423749404 | 5.52528047002407e-25 | 0.663694456152034 | 0.179220708650813 | 0.0989102569862471 |
| STG | 2.31856920453865e-22 | 0.828590757611463 | 5.16449985090892e-13 | 0.687365180389222 | 0.00450125943407914 | 0.307024337036516 |
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Relation with AD stages for CBX5 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_355963 | chr12_54235425_- | 0.000309322051100396 | 0.340641140429115 |
| CER | ADediting_355975 | chr12_54240473_- | 7.89262405817537e-05 | 0.370558286818283 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 3.28291687863512e-06 | 0.430653137736515 |
| TCX | 8.29064122794382e-11 | 0.57854699104149 |
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RelatedDrugs for CBX5 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CBX5 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| CBX5 | C0009402 | Colorectal Carcinoma | 1 | CTD_human |
| CBX5 | C0009404 | Colorectal Neoplasms | 1 | CTD_human |
| CBX5 | C1527249 | Colorectal Cancer | 1 | CTD_human |
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