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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SLC35A3 |
 Gene summary |
| Gene information | Gene symbol | SLC35A3 | Gene ID | 23443 |
| Gene name | solute carrier family 35 member A3 | |
| Synonyms | AMRS | |
| Cytomap | 1p21.2 | |
| Type of gene | protein-coding | |
| Description | UDP-N-acetylglucosamine transportergolgi UDP-GlcNAc transportersolute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9Y2D2, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for SLC35A3 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1(100002686, +), ADediting_2(100002696, +), ADediting_3(100002703, +), ADediting_4(100002716, +), ADediting_5(100002717, +), ADediting_6(100002720, +), ADediting_7(100002734, +), ADediting_8(100002744, +), ADediting_9(100002754, +), ADediting_10(100002849, +), ADediting_11(100002850, +), ADediting_12(100002874, +), ADediting_13(100002875, +), ADediting_14(100002904, +), ADediting_15(100003144, +), ADediting_17(100003201, +), ADediting_18(100003206, +), ADediting_19(100003251, +), ADediting_20(100003256, +), ADediting_21(100003257, +), ADediting_22(100003265, +), ADediting_23(100003266, +), ADediting_24(100003274, +), ADediting_25(100003295, +), ADediting_26(100003296, +), ADediting_27(100003301, +), ADediting_28(100003309, +), ADediting_29(100003322, +), ADediting_30(100003327, +), ADediting_31(100003328, +), ADediting_32(100003336, +), ADediting_33(100003337, +), ADediting_34(100003341, +), ADediting_39(100011799, +), ADediting_40(100011812, +), ADediting_41(100011830, +), ADediting_42(100011848, +), ADediting_43(100011853, +), ADediting_44(100011900, +), ADediting_45(100011909, +), ADediting_46(100011925, +), ADediting_47(100013498, +), ADediting_48(100013509, +), ADediting_49(100013539, +), ADediting_50(100014890, +), ADediting_51(100014897, +), ADediting_52(100014912, +), ADediting_53(100014925, +), ADediting_54(100014930, +), ADediting_55(100014947, +), ADediting_56(100014975, +), ADediting_57(100014996, +), ADediting_58(100015011, +), ADediting_59(100015027, +), ADediting_61(100021143, +), ADediting_62(100021244, +), ADediting_63(100021266, +), ADediting_64(100021285, +), ADediting_65(100021566, +), ADediting_66(100021591, +), ADediting_67(100021611, +), ADediting_68(100021615, +), ADediting_69(100023737, +), ADediting_70(100023753, +), ADediting_71(100023754, +), ADediting_72(100023780, +), ADediting_73(100023792, +), ADediting_74(100023798, +), ADediting_75(100023831, +), ADediting_76(100023842, +), ADediting_77(100023876, +), ADediting_78(100023892, +), ADediting_79(100023896, +), ADediting_80(100023913, +), ADediting_81(100023919, +), ADediting_82(100023922, +), ADediting_83(100023927, +), ADediting_84(100023928, +), ADediting_85(100023939, +), ADediting_86(100023951, +), ADediting_87(100023952, +), ADediting_88(100023962, +), ADediting_89(100023978, +), ADediting_90(100024063, +), ADediting_91(100024279, +), ADediting_92(100024281, +), ADediting_93(100024298, +), ADediting_94(100024404, +), ADediting_95(100024430, +), ADediting_96(100024436, +), ADediting_97(100024440, +), ADediting_98(100024444, +), ADediting_99(100024447, +), ADediting_100(100024453, +), ADediting_101(100024457, +), ADediting_102(100024486, +), ADediting_103(100024492, +), ADediting_104(100024496, +), ADediting_105(100024500, +), ADediting_106(100024501, +), ADediting_107(100024503, +), ADediting_108(100024511, +), ADediting_109(100024516, +), ADediting_110(100024533, +), ADediting_111(100024539, +), ADediting_112(100024563, +), ADediting_113(100024564, +), ADediting_114(100024643, +), ADediting_115(100024651, +), ADediting_116(100024662, +), ADediting_117(100024669, +), ADediting_118(100024683, +), ADediting_119(100024699, +), ADediting_120(100024718, +), ADediting_121(100024719, +), ADediting_122(100024736, +), ADediting_123(100024744, +), ADediting_124(100024747, +), ADediting_125(100027174, +), ADediting_126(100027180, +), ADediting_127(100027196, +), ADediting_128(100027197, +), ADediting_129(100027203, +), ADediting_130(100027210, +), ADediting_131(100027214, +), ADediting_132(100027218, +), ADediting_133(100027219, +), ADediting_134(100027223, +), ADediting_135(100027246, +), ADediting_136(100027256, +), ADediting_137(100027266, +), ADediting_138(100027341, +), ADediting_139(100027345, +), ADediting_140(100027348, +), ADediting_141(100027358, +), ADediting_142(100027396, +), ADediting_143(100027397, +), ADediting_144(100027398, +), ADediting_145(100028039, +), ADediting_146(100028040, +), ADediting_147(100028043, +), ADediting_148(100028044, +), ADediting_149(100028066, +), ADediting_150(100028069, +), ADediting_151(100028070, +), ADediting_152(100028113, +), ADediting_153(100028119, +), ADediting_154(100028173, +), ADediting_155(100028347, +), ADediting_156(100028453, +), ADediting_157(100028456, +), ADediting_158(100028548, +), ADediting_159(100028602, +), ADediting_160(100029543, +), ADediting_161(100032647, +), ADediting_162(100032744, +), ADediting_163(100032806, +), ADediting_164(100032807, +), ADediting_165(100032819, +), ADediting_167(100033177, +), ADediting_168(100033183, +), ADediting_169(100033199, +), ADediting_170(100033200, +), ADediting_171(100033205, +), ADediting_153897(99974997, +), ADediting_153898(99975018, +), ADediting_153899(99979803, +), ADediting_153900(99979857, +), ADediting_153901(99983687, +), ADediting_153902(99983743, +), ADediting_153903(99983883, +), ADediting_153904(99983896, +), ADediting_1513519(100018634, +), ADediting_1513520(100018647, +), ADediting_1513521(100018655, +), ADediting_1513522(100018718, +), ADediting_1513523(100023905, +), ADediting_1513524(100024014, +), ADediting_1513525(100024380, +), ADediting_1513526(100024561, +), ADediting_1513527(100024562, +), ADediting_1513528(100027226, +), ADediting_1513529(100027361, +), ADediting_1513530(100028511, +), ADediting_1513531(100028528, +), ADediting_1513532(100028549, +), ADediting_1513533(100028550, +), ADediting_1513534(100033208, +), ADediting_1513535(100033239, +), ADediting_1513536(100033240, +), ADediting_1513537(100033245, +), ADediting_1521988(99975013, +), ADediting_1521989(99975024, +), ADediting_1521990(99975044, +), ADediting_1521991(99975055, +), ADediting_1595729(100014484, +), ADediting_1595730(100018615, +), ADediting_1595731(100018630, +), ADediting_1595732(100018633, +), ADediting_1595733(100024552, +), ADediting_1603372(99979573, +), ADediting_1603373(99979607, +), |
Top |
RNA editing positional annotations for SLC35A3 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_115 | chr1_100024651_+ | nonsynonymous SNV | ENST00000638338.1 | c.A760G | p.T254A | . | . | . |
| ADediting_116 | chr1_100024662_+ | nonsynonymous SNV | ENST00000639807.1 | c.A782G | p.Q261R | . | . | . |
| ADediting_116 | chr1_100024662_+ | nonsynonymous SNV | ENST00000640600.1 | c.A905G | p.Q302R | . | . | . |
| ADediting_117 | chr1_100024669_+ | nonsynonymous SNV | ENST00000638338.1 | c.A778G | p.S260G | . | . | . |
| ADediting_118 | chr1_100024683_+ | nonsynonymous SNV | ENST00000639807.1 | c.A803G | p.D268G | . | . | . |
| ADediting_118 | chr1_100024683_+ | nonsynonymous SNV | ENST00000640600.1 | c.A926G | p.D309G | . | . | . |
| ADediting_119 | chr1_100024699_+ | nonsynonymous SNV | ENST00000638338.1 | c.A808G | p.T270A | . | . | . |
| ADediting_120 | chr1_100024718_+ | nonsynonymous SNV | ENST00000639807.1 | c.A838G | p.K280E | . | . | . |
| ADediting_120 | chr1_100024718_+ | nonsynonymous SNV | ENST00000640600.1 | c.A961G | p.K321E | . | . | . |
| ADediting_120 | chr1_100024718_+ | nonsynonymous SNV | ENST00000638338.1 | c.A827G | p.Q276R | . | . | . |
| ADediting_121 | chr1_100024719_+ | nonsynonymous SNV | ENST00000639807.1 | c.A839G | p.K280R | . | . | . |
| ADediting_121 | chr1_100024719_+ | nonsynonymous SNV | ENST00000640600.1 | c.A962G | p.K321R | . | . | . |
| ADediting_122 | chr1_100024736_+ | nonsynonymous SNV | ENST00000638338.1 | c.A845G | p.Q282R | . | . | . |
| ADediting_122 | chr1_100024736_+ | nonsynonymous SNV | ENST00000640600.1 | c.A979G | p.S327G | . | . | . |
| ADediting_122 | chr1_100024736_+ | nonsynonymous SNV | ENST00000639807.1 | c.A856G | p.S286G | . | . | . |
| ADediting_123 | chr1_100024744_+ | stoploss | ENST00000639807.1 | c.A864G | p.X288W | . | . | . |
| ADediting_123 | chr1_100024744_+ | stoploss | ENST00000640600.1 | c.A987G | p.X329W | . | . | . |
| ADediting_124 | chr1_100024747_+ | nonsynonymous SNV | ENST00000638338.1 | c.A856G | p.S286G | . | . | . |
| ADediting_125 | chr1_100027174_+ | nonsynonymous SNV | ENST00000638371.1 | c.A920G | p.Q307R | . | . | . |
| ADediting_126 | chr1_100027180_+ | nonsynonymous SNV | ENST00000638371.1 | c.A926G | p.Q309R | . | . | . |
| ADediting_127 | chr1_100027196_+ | synonymous SNV | ENST00000638371.1 | c.A942G | p.V314V | . | . | . |
| ADediting_128 | chr1_100027197_+ | nonsynonymous SNV | ENST00000638371.1 | c.A943G | p.I315V | . | . | . |
| ADediting_129 | chr1_100027203_+ | nonsynonymous SNV | ENST00000638371.1 | c.A949G | p.T317A | . | . | . |
| ADediting_130 | chr1_100027210_+ | stoploss | ENST00000638371.1 | c.A956G | p.X319W | . | . | . |
| ADediting_1521988 | chr1_99975013_+ | nonsynonymous SNV | ENST00000532693.5 | c.A151G | p.S51G | . | . | . |
| ADediting_1521989 | chr1_99975024_+ | synonymous SNV | ENST00000532693.5 | c.A162G | p.Q54Q | . | . | . |
| ADediting_1521990 | chr1_99975044_+ | nonsynonymous SNV | ENST00000532693.5 | c.A182G | p.K61R | . | . | . |
| ADediting_153897 | chr1_99974997_+ | synonymous SNV | ENST00000532693.5 | c.A135G | p.V45V | . | . | . |
| ADediting_153898 | chr1_99975018_+ | synonymous SNV | ENST00000532693.5 | c.A156G | p.S52S | . | . | . |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1 | chr1_100002686_+ | intronic |
| ADediting_2 | chr1_100002696_+ | intronic |
| ADediting_3 | chr1_100002703_+ | intronic |
| ADediting_4 | chr1_100002716_+ | intronic |
| ADediting_5 | chr1_100002717_+ | intronic |
| ADediting_6 | chr1_100002720_+ | intronic |
| ADediting_7 | chr1_100002734_+ | intronic |
| ADediting_8 | chr1_100002744_+ | intronic |
| ADediting_9 | chr1_100002754_+ | intronic |
| ADediting_10 | chr1_100002849_+ | intronic |
| ADediting_11 | chr1_100002850_+ | intronic |
| ADediting_12 | chr1_100002874_+ | intronic |
| ADediting_13 | chr1_100002875_+ | intronic |
| ADediting_14 | chr1_100002904_+ | intronic |
| ADediting_15 | chr1_100003144_+ | intronic |
| ADediting_17 | chr1_100003201_+ | intronic |
| ADediting_18 | chr1_100003206_+ | intronic |
| ADediting_19 | chr1_100003251_+ | intronic |
| ADediting_20 | chr1_100003256_+ | intronic |
| ADediting_21 | chr1_100003257_+ | intronic |
| ADediting_22 | chr1_100003265_+ | intronic |
| ADediting_23 | chr1_100003266_+ | intronic |
| ADediting_24 | chr1_100003274_+ | intronic |
| ADediting_25 | chr1_100003295_+ | intronic |
| ADediting_26 | chr1_100003296_+ | intronic |
| ADediting_27 | chr1_100003301_+ | intronic |
| ADediting_28 | chr1_100003309_+ | intronic |
| ADediting_29 | chr1_100003322_+ | intronic |
| ADediting_30 | chr1_100003327_+ | intronic |
| ADediting_31 | chr1_100003328_+ | intronic |
| ADediting_32 | chr1_100003336_+ | intronic |
| ADediting_33 | chr1_100003337_+ | intronic |
| ADediting_34 | chr1_100003341_+ | intronic |
| ADediting_39 | chr1_100011799_+ | intronic |
| ADediting_40 | chr1_100011812_+ | intronic |
| ADediting_41 | chr1_100011830_+ | intronic |
| ADediting_42 | chr1_100011848_+ | intronic |
| ADediting_43 | chr1_100011853_+ | intronic |
| ADediting_44 | chr1_100011900_+ | intronic |
| ADediting_45 | chr1_100011909_+ | intronic |
| ADediting_46 | chr1_100011925_+ | intronic |
| ADediting_47 | chr1_100013498_+ | intronic |
| ADediting_48 | chr1_100013509_+ | intronic |
| ADediting_49 | chr1_100013539_+ | intronic |
| ADediting_50 | chr1_100014890_+ | intronic |
| ADediting_51 | chr1_100014897_+ | intronic |
| ADediting_52 | chr1_100014912_+ | intronic |
| ADediting_53 | chr1_100014925_+ | intronic |
| ADediting_54 | chr1_100014930_+ | intronic |
| ADediting_55 | chr1_100014947_+ | intronic |
| ADediting_56 | chr1_100014975_+ | intronic |
| ADediting_57 | chr1_100014996_+ | intronic |
| ADediting_58 | chr1_100015011_+ | intronic |
| ADediting_59 | chr1_100015027_+ | intronic |
| ADediting_61 | chr1_100021143_+ | intronic |
| ADediting_62 | chr1_100021244_+ | intronic |
| ADediting_63 | chr1_100021266_+ | intronic |
| ADediting_64 | chr1_100021285_+ | intronic |
| ADediting_65 | chr1_100021566_+ | intronic |
| ADediting_66 | chr1_100021591_+ | intronic |
| ADediting_67 | chr1_100021611_+ | intronic |
| ADediting_68 | chr1_100021615_+ | intronic |
| ADediting_69 | chr1_100023737_+ | UTR3 |
| ADediting_70 | chr1_100023753_+ | UTR3 |
| ADediting_71 | chr1_100023754_+ | UTR3 |
| ADediting_72 | chr1_100023780_+ | UTR3 |
| ADediting_73 | chr1_100023792_+ | UTR3 |
| ADediting_74 | chr1_100023798_+ | UTR3 |
| ADediting_75 | chr1_100023831_+ | UTR3 |
| ADediting_76 | chr1_100023842_+ | UTR3 |
| ADediting_77 | chr1_100023876_+ | UTR3 |
| ADediting_78 | chr1_100023892_+ | UTR3 |
| ADediting_79 | chr1_100023896_+ | UTR3 |
| ADediting_80 | chr1_100023913_+ | UTR3 |
| ADediting_81 | chr1_100023919_+ | UTR3 |
| ADediting_82 | chr1_100023922_+ | UTR3 |
| ADediting_83 | chr1_100023927_+ | UTR3 |
| ADediting_84 | chr1_100023928_+ | UTR3 |
| ADediting_85 | chr1_100023939_+ | UTR3 |
| ADediting_86 | chr1_100023951_+ | UTR3 |
| ADediting_87 | chr1_100023952_+ | UTR3 |
| ADediting_88 | chr1_100023962_+ | UTR3 |
| ADediting_89 | chr1_100023978_+ | UTR3 |
| ADediting_90 | chr1_100024063_+ | UTR3 |
| ADediting_91 | chr1_100024279_+ | UTR3 |
| ADediting_92 | chr1_100024281_+ | UTR3 |
| ADediting_93 | chr1_100024298_+ | UTR3 |
| ADediting_94 | chr1_100024404_+ | UTR3 |
| ADediting_95 | chr1_100024430_+ | UTR3 |
| ADediting_96 | chr1_100024436_+ | UTR3 |
| ADediting_97 | chr1_100024440_+ | UTR3 |
| ADediting_98 | chr1_100024444_+ | UTR3 |
| ADediting_99 | chr1_100024447_+ | UTR3 |
| ADediting_100 | chr1_100024453_+ | UTR3 |
| ADediting_101 | chr1_100024457_+ | UTR3 |
| ADediting_102 | chr1_100024486_+ | UTR3 |
| ADediting_103 | chr1_100024492_+ | UTR3 |
| ADediting_104 | chr1_100024496_+ | UTR3 |
| ADediting_105 | chr1_100024500_+ | UTR3 |
| ADediting_106 | chr1_100024501_+ | UTR3 |
| ADediting_107 | chr1_100024503_+ | UTR3 |
| ADediting_108 | chr1_100024511_+ | UTR3 |
| ADediting_109 | chr1_100024516_+ | UTR3 |
| ADediting_110 | chr1_100024533_+ | UTR3 |
| ADediting_111 | chr1_100024539_+ | UTR3 |
| ADediting_112 | chr1_100024563_+ | UTR3 |
| ADediting_113 | chr1_100024564_+ | UTR3 |
| ADediting_114 | chr1_100024643_+ | splicing |
| ADediting_115 | chr1_100024651_+ | exonic |
| ADediting_116 | chr1_100024662_+ | exonic |
| ADediting_117 | chr1_100024669_+ | exonic |
| ADediting_118 | chr1_100024683_+ | exonic |
| ADediting_119 | chr1_100024699_+ | exonic |
| ADediting_120 | chr1_100024718_+ | exonic |
| ADediting_121 | chr1_100024719_+ | exonic |
| ADediting_122 | chr1_100024736_+ | exonic |
| ADediting_123 | chr1_100024744_+ | exonic |
| ADediting_124 | chr1_100024747_+ | exonic |
| ADediting_125 | chr1_100027174_+ | exonic |
| ADediting_126 | chr1_100027180_+ | exonic |
| ADediting_127 | chr1_100027196_+ | exonic |
| ADediting_128 | chr1_100027197_+ | exonic |
| ADediting_129 | chr1_100027203_+ | exonic |
| ADediting_130 | chr1_100027210_+ | exonic |
| ADediting_131 | chr1_100027214_+ | UTR3 |
| ADediting_132 | chr1_100027218_+ | UTR3 |
| ADediting_133 | chr1_100027219_+ | UTR3 |
| ADediting_134 | chr1_100027223_+ | UTR3 |
| ADediting_135 | chr1_100027246_+ | UTR3 |
| ADediting_136 | chr1_100027256_+ | UTR3 |
| ADediting_137 | chr1_100027266_+ | UTR3 |
| ADediting_138 | chr1_100027341_+ | UTR3 |
| ADediting_139 | chr1_100027345_+ | UTR3 |
| ADediting_140 | chr1_100027348_+ | UTR3 |
| ADediting_141 | chr1_100027358_+ | UTR3 |
| ADediting_142 | chr1_100027396_+ | UTR3 |
| ADediting_143 | chr1_100027397_+ | UTR3 |
| ADediting_144 | chr1_100027398_+ | UTR3 |
| ADediting_145 | chr1_100028039_+ | UTR3 |
| ADediting_146 | chr1_100028040_+ | UTR3 |
| ADediting_147 | chr1_100028043_+ | UTR3 |
| ADediting_148 | chr1_100028044_+ | UTR3 |
| ADediting_149 | chr1_100028066_+ | UTR3 |
| ADediting_150 | chr1_100028069_+ | UTR3 |
| ADediting_151 | chr1_100028070_+ | UTR3 |
| ADediting_152 | chr1_100028113_+ | UTR3 |
| ADediting_153 | chr1_100028119_+ | UTR3 |
| ADediting_154 | chr1_100028173_+ | UTR3 |
| ADediting_155 | chr1_100028347_+ | UTR3 |
| ADediting_156 | chr1_100028453_+ | UTR3 |
| ADediting_157 | chr1_100028456_+ | UTR3 |
| ADediting_158 | chr1_100028548_+ | UTR3 |
| ADediting_159 | chr1_100028602_+ | UTR3 |
| ADediting_160 | chr1_100029543_+ | UTR3 |
| ADediting_161 | chr1_100032647_+ | UTR3 |
| ADediting_162 | chr1_100032744_+ | UTR3 |
| ADediting_163 | chr1_100032806_+ | UTR3 |
| ADediting_164 | chr1_100032807_+ | UTR3 |
| ADediting_165 | chr1_100032819_+ | UTR3 |
| ADediting_167 | chr1_100033177_+ | UTR3 |
| ADediting_168 | chr1_100033183_+ | UTR3 |
| ADediting_169 | chr1_100033199_+ | UTR3 |
| ADediting_170 | chr1_100033200_+ | UTR3 |
| ADediting_171 | chr1_100033205_+ | UTR3 |
| ADediting_153897 | chr1_99974997_+ | exonic |
| ADediting_153898 | chr1_99975018_+ | exonic |
| ADediting_153899 | chr1_99979803_+ | intronic |
| ADediting_153900 | chr1_99979857_+ | intronic |
| ADediting_153901 | chr1_99983687_+ | intronic |
| ADediting_153902 | chr1_99983743_+ | intronic |
| ADediting_153903 | chr1_99983883_+ | intronic |
| ADediting_153904 | chr1_99983896_+ | intronic |
| ADediting_1513519 | chr1_100018634_+ | intronic |
| ADediting_1513520 | chr1_100018647_+ | intronic |
| ADediting_1513521 | chr1_100018655_+ | intronic |
| ADediting_1513522 | chr1_100018718_+ | intronic |
| ADediting_1513523 | chr1_100023905_+ | UTR3 |
| ADediting_1513524 | chr1_100024014_+ | UTR3 |
| ADediting_1513525 | chr1_100024380_+ | UTR3 |
| ADediting_1513526 | chr1_100024561_+ | UTR3 |
| ADediting_1513527 | chr1_100024562_+ | UTR3 |
| ADediting_1513528 | chr1_100027226_+ | UTR3 |
| ADediting_1513529 | chr1_100027361_+ | UTR3 |
| ADediting_1513530 | chr1_100028511_+ | UTR3 |
| ADediting_1513531 | chr1_100028528_+ | UTR3 |
| ADediting_1513532 | chr1_100028549_+ | UTR3 |
| ADediting_1513533 | chr1_100028550_+ | UTR3 |
| ADediting_1513534 | chr1_100033208_+ | UTR3 |
| ADediting_1513535 | chr1_100033239_+ | UTR3 |
| ADediting_1513536 | chr1_100033240_+ | UTR3 |
| ADediting_1513537 | chr1_100033245_+ | UTR3 |
| ADediting_1521988 | chr1_99975013_+ | exonic |
| ADediting_1521989 | chr1_99975024_+ | exonic |
| ADediting_1521990 | chr1_99975044_+ | exonic |
| ADediting_1521991 | chr1_99975055_+ | UTR5;UTR3 |
| ADediting_1595729 | chr1_100014484_+ | intronic |
| ADediting_1595730 | chr1_100018615_+ | intronic |
| ADediting_1595731 | chr1_100018630_+ | intronic |
| ADediting_1595732 | chr1_100018633_+ | intronic |
| ADediting_1595733 | chr1_100024552_+ | UTR3 |
| ADediting_1603372 | chr1_99979573_+ | intronic |
| ADediting_1603373 | chr1_99979607_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1 | chr1_100002686_+ | SINE | Alu | Name=AluJr |
| ADediting_2 | chr1_100002696_+ | SINE | Alu | Name=AluJr |
| ADediting_3 | chr1_100002703_+ | SINE | Alu | Name=AluJr |
| ADediting_4 | chr1_100002716_+ | SINE | Alu | Name=AluJr |
| ADediting_5 | chr1_100002717_+ | SINE | Alu | Name=AluJr |
| ADediting_6 | chr1_100002720_+ | SINE | Alu | Name=AluJr |
| ADediting_7 | chr1_100002734_+ | SINE | Alu | Name=AluJr |
| ADediting_8 | chr1_100002744_+ | SINE | Alu | Name=AluJr |
| ADediting_9 | chr1_100002754_+ | SINE | Alu | Name=AluJr |
| ADediting_10 | chr1_100002849_+ | SINE | Alu | Name=AluJr |
| ADediting_11 | chr1_100002850_+ | SINE | Alu | Name=AluJr |
| ADediting_12 | chr1_100002874_+ | SINE | Alu | Name=AluJr |
| ADediting_13 | chr1_100002875_+ | SINE | Alu | Name=AluJr |
| ADediting_14 | chr1_100002904_+ | SINE | Alu | Name=AluJr |
| ADediting_15 | chr1_100003144_+ | SINE | Alu | Name=AluSq2 |
| ADediting_17 | chr1_100003201_+ | SINE | Alu | Name=AluSq2 |
| ADediting_18 | chr1_100003206_+ | SINE | Alu | Name=AluSq2 |
| ADediting_19 | chr1_100003251_+ | SINE | Alu | Name=AluSq2 |
| ADediting_20 | chr1_100003256_+ | SINE | Alu | Name=AluSq2 |
| ADediting_21 | chr1_100003257_+ | SINE | Alu | Name=AluSq2 |
| ADediting_22 | chr1_100003265_+ | SINE | Alu | Name=AluSq2 |
| ADediting_23 | chr1_100003266_+ | SINE | Alu | Name=AluSq2 |
| ADediting_24 | chr1_100003274_+ | SINE | Alu | Name=AluSq2 |
| ADediting_25 | chr1_100003295_+ | SINE | Alu | Name=AluSq2 |
| ADediting_26 | chr1_100003296_+ | SINE | Alu | Name=AluSq2 |
| ADediting_27 | chr1_100003301_+ | SINE | Alu | Name=AluSq2 |
| ADediting_28 | chr1_100003309_+ | SINE | Alu | Name=AluSq2 |
| ADediting_29 | chr1_100003322_+ | SINE | Alu | Name=AluSq2 |
| ADediting_30 | chr1_100003327_+ | SINE | Alu | Name=AluSq2 |
| ADediting_31 | chr1_100003328_+ | SINE | Alu | Name=AluSq2 |
| ADediting_32 | chr1_100003336_+ | SINE | Alu | Name=AluSq2 |
| ADediting_33 | chr1_100003337_+ | SINE | Alu | Name=AluSq2 |
| ADediting_34 | chr1_100003341_+ | SINE | Alu | Name=AluSq2 |
| ADediting_39 | chr1_100011799_+ | SINE | Alu | Name=AluY |
| ADediting_40 | chr1_100011812_+ | SINE | Alu | Name=AluY |
| ADediting_41 | chr1_100011830_+ | SINE | Alu | Name=AluY |
| ADediting_42 | chr1_100011848_+ | SINE | Alu | Name=AluY |
| ADediting_43 | chr1_100011853_+ | SINE | Alu | Name=AluY |
| ADediting_44 | chr1_100011900_+ | SINE | Alu | Name=AluY |
| ADediting_45 | chr1_100011909_+ | SINE | Alu | Name=AluY |
| ADediting_46 | chr1_100011925_+ | SINE | Alu | Name=AluY |
| ADediting_47 | chr1_100013498_+ | SINE | Alu | Name=AluJo |
| ADediting_48 | chr1_100013509_+ | SINE | Alu | Name=AluJo |
| ADediting_49 | chr1_100013539_+ | SINE | Alu | Name=AluJo |
| ADediting_50 | chr1_100014890_+ | SINE | Alu | Name=AluSc8 |
| ADediting_51 | chr1_100014897_+ | SINE | Alu | Name=AluSc8 |
| ADediting_52 | chr1_100014912_+ | SINE | Alu | Name=AluSc8 |
| ADediting_53 | chr1_100014925_+ | SINE | Alu | Name=AluSc8 |
| ADediting_54 | chr1_100014930_+ | SINE | Alu | Name=AluSc8 |
| ADediting_55 | chr1_100014947_+ | SINE | Alu | Name=AluSc8 |
| ADediting_56 | chr1_100014975_+ | SINE | Alu | Name=AluSc8 |
| ADediting_57 | chr1_100014996_+ | SINE | Alu | Name=AluSc8 |
| ADediting_58 | chr1_100015011_+ | SINE | Alu | Name=AluSc8 |
| ADediting_59 | chr1_100015027_+ | SINE | Alu | Name=AluSc8 |
| ADediting_61 | chr1_100021143_+ | SINE | Alu | Name=AluSz |
| ADediting_62 | chr1_100021244_+ | SINE | Alu | Name=AluSz |
| ADediting_63 | chr1_100021266_+ | SINE | Alu | Name=AluSz |
| ADediting_64 | chr1_100021285_+ | SINE | Alu | Name=AluSz |
| ADediting_65 | chr1_100021566_+ | SINE | Alu | Name=AluJb |
| ADediting_66 | chr1_100021591_+ | SINE | Alu | Name=AluJb |
| ADediting_67 | chr1_100021611_+ | SINE | Alu | Name=AluJb |
| ADediting_68 | chr1_100021615_+ | SINE | Alu | Name=AluJb |
| ADediting_69 | chr1_100023737_+ | SINE | Alu | Name=AluSc |
| ADediting_70 | chr1_100023753_+ | SINE | Alu | Name=AluSc |
| ADediting_71 | chr1_100023754_+ | SINE | Alu | Name=AluSc |
| ADediting_72 | chr1_100023780_+ | SINE | Alu | Name=AluSc |
| ADediting_73 | chr1_100023792_+ | SINE | Alu | Name=AluSc |
| ADediting_74 | chr1_100023798_+ | SINE | Alu | Name=AluSc |
| ADediting_75 | chr1_100023831_+ | SINE | Alu | Name=AluSc |
| ADediting_76 | chr1_100023842_+ | SINE | Alu | Name=AluSc |
| ADediting_77 | chr1_100023876_+ | SINE | Alu | Name=AluSc |
| ADediting_78 | chr1_100023892_+ | SINE | Alu | Name=AluSc |
| ADediting_79 | chr1_100023896_+ | SINE | Alu | Name=AluSc |
| ADediting_80 | chr1_100023913_+ | SINE | Alu | Name=AluSc |
| ADediting_81 | chr1_100023919_+ | SINE | Alu | Name=AluSc |
| ADediting_82 | chr1_100023922_+ | SINE | Alu | Name=AluSc |
| ADediting_83 | chr1_100023927_+ | SINE | Alu | Name=AluSc |
| ADediting_84 | chr1_100023928_+ | SINE | Alu | Name=AluSc |
| ADediting_85 | chr1_100023939_+ | SINE | Alu | Name=AluSc |
| ADediting_86 | chr1_100023951_+ | SINE | Alu | Name=AluSc |
| ADediting_87 | chr1_100023952_+ | SINE | Alu | Name=AluSc |
| ADediting_88 | chr1_100023962_+ | SINE | Alu | Name=AluSc |
| ADediting_89 | chr1_100023978_+ | SINE | Alu | Name=AluSc |
| ADediting_91 | chr1_100024279_+ | SINE | Alu | Name=AluSg |
| ADediting_92 | chr1_100024281_+ | SINE | Alu | Name=AluSg |
| ADediting_93 | chr1_100024298_+ | SINE | Alu | Name=AluSg |
| ADediting_94 | chr1_100024404_+ | SINE | Alu | Name=AluSg |
| ADediting_95 | chr1_100024430_+ | SINE | Alu | Name=AluSg |
| ADediting_96 | chr1_100024436_+ | SINE | Alu | Name=AluSg |
| ADediting_97 | chr1_100024440_+ | SINE | Alu | Name=AluSg |
| ADediting_98 | chr1_100024444_+ | SINE | Alu | Name=AluSg |
| ADediting_99 | chr1_100024447_+ | SINE | Alu | Name=AluSg |
| ADediting_100 | chr1_100024453_+ | SINE | Alu | Name=AluSg |
| ADediting_101 | chr1_100024457_+ | SINE | Alu | Name=AluSg |
| ADediting_102 | chr1_100024486_+ | SINE | Alu | Name=AluSg |
| ADediting_103 | chr1_100024492_+ | SINE | Alu | Name=AluSg |
| ADediting_104 | chr1_100024496_+ | SINE | Alu | Name=AluSg |
| ADediting_105 | chr1_100024500_+ | SINE | Alu | Name=AluSg |
| ADediting_106 | chr1_100024501_+ | SINE | Alu | Name=AluSg |
| ADediting_107 | chr1_100024503_+ | SINE | Alu | Name=AluSg |
| ADediting_108 | chr1_100024511_+ | SINE | Alu | Name=AluSg |
| ADediting_109 | chr1_100024516_+ | SINE | Alu | Name=AluSg |
| ADediting_110 | chr1_100024533_+ | SINE | Alu | Name=AluSg |
| ADediting_111 | chr1_100024539_+ | SINE | Alu | Name=AluSg |
| ADediting_112 | chr1_100024563_+ | SINE | Alu | Name=AluSg |
| ADediting_113 | chr1_100024564_+ | SINE | Alu | Name=AluSg |
| ADediting_114 | chr1_100024643_+ | SINE | Alu | Name=AluSc5 |
| ADediting_115 | chr1_100024651_+ | SINE | Alu | Name=AluSc5 |
| ADediting_116 | chr1_100024662_+ | SINE | Alu | Name=AluSc5 |
| ADediting_117 | chr1_100024669_+ | SINE | Alu | Name=AluSc5 |
| ADediting_118 | chr1_100024683_+ | SINE | Alu | Name=AluSc5 |
| ADediting_119 | chr1_100024699_+ | SINE | Alu | Name=AluSc5 |
| ADediting_120 | chr1_100024718_+ | SINE | Alu | Name=AluSc5 |
| ADediting_121 | chr1_100024719_+ | SINE | Alu | Name=AluSc5 |
| ADediting_122 | chr1_100024736_+ | SINE | Alu | Name=AluSc5 |
| ADediting_123 | chr1_100024744_+ | SINE | Alu | Name=AluSc5 |
| ADediting_124 | chr1_100024747_+ | SINE | Alu | Name=AluSc5 |
| ADediting_125 | chr1_100027174_+ | SINE | Alu | Name=AluJo |
| ADediting_126 | chr1_100027180_+ | SINE | Alu | Name=AluJo |
| ADediting_127 | chr1_100027196_+ | SINE | Alu | Name=AluJo |
| ADediting_128 | chr1_100027197_+ | SINE | Alu | Name=AluJo |
| ADediting_129 | chr1_100027203_+ | SINE | Alu | Name=AluJo |
| ADediting_130 | chr1_100027210_+ | SINE | Alu | Name=AluJo |
| ADediting_131 | chr1_100027214_+ | SINE | Alu | Name=AluJo |
| ADediting_132 | chr1_100027218_+ | SINE | Alu | Name=AluJo |
| ADediting_133 | chr1_100027219_+ | SINE | Alu | Name=AluJo |
| ADediting_134 | chr1_100027223_+ | SINE | Alu | Name=AluJo |
| ADediting_135 | chr1_100027246_+ | SINE | Alu | Name=AluJo |
| ADediting_136 | chr1_100027256_+ | SINE | Alu | Name=AluJo |
| ADediting_137 | chr1_100027266_+ | SINE | Alu | Name=AluJo |
| ADediting_138 | chr1_100027341_+ | SINE | Alu | Name=AluJo |
| ADediting_139 | chr1_100027345_+ | SINE | Alu | Name=AluJo |
| ADediting_140 | chr1_100027348_+ | SINE | Alu | Name=AluJo |
| ADediting_141 | chr1_100027358_+ | SINE | Alu | Name=AluJo |
| ADediting_142 | chr1_100027396_+ | SINE | Alu | Name=AluJo |
| ADediting_143 | chr1_100027397_+ | SINE | Alu | Name=AluJo |
| ADediting_144 | chr1_100027398_+ | SINE | Alu | Name=AluJo |
| ADediting_145 | chr1_100028039_+ | SINE | Alu | Name=AluSx |
| ADediting_146 | chr1_100028040_+ | SINE | Alu | Name=AluSx |
| ADediting_147 | chr1_100028043_+ | SINE | Alu | Name=AluSx |
| ADediting_148 | chr1_100028044_+ | SINE | Alu | Name=AluSx |
| ADediting_149 | chr1_100028066_+ | SINE | Alu | Name=AluSx |
| ADediting_150 | chr1_100028069_+ | SINE | Alu | Name=AluSx |
| ADediting_151 | chr1_100028070_+ | SINE | Alu | Name=AluSx |
| ADediting_152 | chr1_100028113_+ | SINE | Alu | Name=AluSx |
| ADediting_153 | chr1_100028119_+ | SINE | Alu | Name=AluSx |
| ADediting_154 | chr1_100028173_+ | SINE | Alu | Name=AluSx |
| ADediting_155 | chr1_100028347_+ | SINE | Alu | Name=AluJb |
| ADediting_156 | chr1_100028453_+ | SINE | Alu | Name=AluJb |
| ADediting_157 | chr1_100028456_+ | SINE | Alu | Name=AluJb |
| ADediting_158 | chr1_100028548_+ | SINE | Alu | Name=AluJb |
| ADediting_159 | chr1_100028602_+ | SINE | Alu | Name=AluJb |
| ADediting_160 | chr1_100029543_+ | SINE | Alu | Name=AluSx1 |
| ADediting_161 | chr1_100032647_+ | SINE | Alu | Name=AluSg4 |
| ADediting_162 | chr1_100032744_+ | SINE | Alu | Name=AluSg4 |
| ADediting_163 | chr1_100032806_+ | SINE | Alu | Name=AluSg4 |
| ADediting_164 | chr1_100032807_+ | SINE | Alu | Name=AluSg4 |
| ADediting_165 | chr1_100032819_+ | SINE | Alu | Name=AluSg4 |
| ADediting_167 | chr1_100033177_+ | SINE | Alu | Name=FLAM_C |
| ADediting_168 | chr1_100033183_+ | SINE | Alu | Name=FLAM_C |
| ADediting_169 | chr1_100033199_+ | SINE | Alu | Name=FLAM_C |
| ADediting_170 | chr1_100033200_+ | SINE | Alu | Name=FLAM_C |
| ADediting_171 | chr1_100033205_+ | SINE | Alu | Name=FLAM_C |
| ADediting_153897 | chr1_99974997_+ | SINE | Alu | Name=AluJb |
| ADediting_153898 | chr1_99975018_+ | SINE | Alu | Name=AluJb |
| ADediting_153899 | chr1_99979803_+ | SINE | Alu | Name=AluSx |
| ADediting_153900 | chr1_99979857_+ | SINE | Alu | Name=AluSx |
| ADediting_153901 | chr1_99983687_+ | SINE | Alu | Name=AluSg |
| ADediting_153902 | chr1_99983743_+ | SINE | Alu | Name=AluSg |
| ADediting_153903 | chr1_99983883_+ | SINE | Alu | Name=AluSg |
| ADediting_153904 | chr1_99983896_+ | SINE | Alu | Name=AluSg |
| ADediting_1513519 | chr1_100018634_+ | SINE | Alu | Name=AluJo |
| ADediting_1513520 | chr1_100018647_+ | SINE | Alu | Name=AluJo |
| ADediting_1513521 | chr1_100018655_+ | SINE | Alu | Name=AluJo |
| ADediting_1513522 | chr1_100018718_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1513523 | chr1_100023905_+ | SINE | Alu | Name=AluSc |
| ADediting_1513524 | chr1_100024014_+ | SINE | Alu | Name=AluSc |
| ADediting_1513525 | chr1_100024380_+ | SINE | Alu | Name=AluSg |
| ADediting_1513526 | chr1_100024561_+ | SINE | Alu | Name=AluSg |
| ADediting_1513527 | chr1_100024562_+ | SINE | Alu | Name=AluSg |
| ADediting_1513528 | chr1_100027226_+ | SINE | Alu | Name=AluJo |
| ADediting_1513529 | chr1_100027361_+ | SINE | Alu | Name=AluJo |
| ADediting_1513530 | chr1_100028511_+ | SINE | Alu | Name=AluJb |
| ADediting_1513531 | chr1_100028528_+ | SINE | Alu | Name=AluJb |
| ADediting_1513532 | chr1_100028549_+ | SINE | Alu | Name=AluJb |
| ADediting_1513533 | chr1_100028550_+ | SINE | Alu | Name=AluJb |
| ADediting_1513534 | chr1_100033208_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1513535 | chr1_100033239_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1513536 | chr1_100033240_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1513537 | chr1_100033245_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1521988 | chr1_99975013_+ | SINE | Alu | Name=AluJb |
| ADediting_1521989 | chr1_99975024_+ | SINE | Alu | Name=AluJb |
| ADediting_1521990 | chr1_99975044_+ | SINE | Alu | Name=AluJb |
| ADediting_1521991 | chr1_99975055_+ | SINE | Alu | Name=AluJb |
| ADediting_1595729 | chr1_100014484_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1595730 | chr1_100018615_+ | SINE | Alu | Name=AluJo |
| ADediting_1595731 | chr1_100018630_+ | SINE | Alu | Name=AluJo |
| ADediting_1595732 | chr1_100018633_+ | SINE | Alu | Name=AluJo |
| ADediting_1595733 | chr1_100024552_+ | SINE | Alu | Name=AluSg |
| ADediting_1603372 | chr1_99979573_+ | SINE | Alu | Name=AluY |
| ADediting_1603373 | chr1_99979607_+ | SINE | Alu | Name=AluY |
Top |
RNA A-to-I editing events in the alternative splicing sites for SLC35A3 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| A3SS | ADediting_114 | chr1_100024643_+ | 100024625:100024647 | 3ss | 2i | TTTTTTTTTTTTTGAGACAGAGT | 3.01 | TTTTTTTTTTTTTGAGACGGAGT | -4.95 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC35A3 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |