ADeditome Logo

Home

Download

Statistics

Landscape

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for KIAA0930

check button Gene summary
Gene informationGene symbol

KIAA0930

Gene ID

23313

Gene nameKIAA0930
SynonymsC22orf9|LSC3
Cytomap

22q13.31

Type of geneprotein-coding
Descriptionuncharacterized protein KIAA0930
Modification date20200313
UniProtAcc

Q6ICG6,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for KIAA0930

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_1003660(45193983, -), ADediting_1003661(45194408, -), ADediting_1003662(45194413, -), ADediting_1003663(45194414, -), ADediting_1003664(45194421, -), ADediting_1003665(45194478, -), ADediting_1003666(45207886, -), ADediting_1003667(45215946, -), ADediting_1003668(45217098, -), ADediting_1003669(45217117, -), ADediting_1003670(45217140, -), ADediting_1003671(45217143, -), ADediting_1003672(45217178, -), ADediting_1003673(45217195, -), ADediting_1003674(45217198, -), ADediting_1003675(45217239, -), ADediting_1003676(45217249, -), ADediting_1003677(45217252, -), ADediting_1003678(45217278, -), ADediting_1003679(45217279, -), ADediting_1003680(45217298, -), ADediting_1003681(45217304, -), ADediting_1003682(45217309, -), ADediting_1003683(45217330, -), ADediting_1003684(45218185, -), ADediting_1003685(45218189, -), ADediting_1003686(45218230, -), ADediting_1003687(45218234, -), ADediting_1003688(45218254, -), ADediting_1003689(45218260, -), ADediting_1003690(45218263, -), ADediting_1003691(45218296, -), ADediting_1003692(45218304, -), ADediting_1003693(45218322, -), ADediting_1003694(45218325, -), ADediting_1003695(45218416, -), ADediting_1003696(45218456, -), ADediting_1003697(45218457, -), ADediting_1003698(45218463, -), ADediting_1003699(45218473, -), ADediting_1003700(45219679, -), ADediting_1003701(45219680, -), ADediting_1003702(45219684, -), ADediting_1003703(45219689, -), ADediting_1003704(45219705, -), ADediting_1003705(45219706, -), ADediting_1003706(45219716, -), ADediting_1003707(45219769, -), ADediting_1003708(45219770, -), ADediting_1003709(45219774, -), ADediting_1003710(45219837, -), ADediting_1003711(45219879, -), ADediting_1003712(45220196, -), ADediting_1003713(45220202, -), ADediting_1003714(45220208, -), ADediting_1003715(45220236, -), ADediting_1003716(45220261, -), ADediting_1003717(45220290, -), ADediting_1003718(45220315, -), ADediting_1003719(45220343, -), ADediting_1003720(45220354, -), ADediting_1003721(45220355, -), ADediting_1003722(45220368, -), ADediting_1003723(45220369, -), ADediting_1003724(45220372, -), ADediting_1003725(45220392, -), ADediting_1003726(45220393, -), ADediting_1003727(45220696, -), ADediting_1003728(45220841, -), ADediting_1003729(45221820, -), ADediting_1003730(45222007, -), ADediting_1003731(45222358, -), ADediting_1003732(45222554, -), ADediting_1003733(45229974, -), ADediting_1003734(45229979, -), ADediting_1003735(45230650, -), ADediting_1003736(45230653, -), ADediting_1003737(45230678, -), ADediting_1003738(45230679, -), ADediting_1003739(45230710, -), ADediting_1003740(45230750, -), ADediting_1003741(45230760, -), ADediting_1003742(45230761, -), ADediting_1003743(45230775, -), ADediting_1003744(45230830, -), ADediting_1003745(45230831, -), ADediting_1003746(45230852, -), ADediting_1003747(45230853, -), ADediting_1003748(45231004, -), ADediting_1003749(45231005, -), ADediting_1003750(45231085, -), ADediting_1003751(45231131, -), ADediting_1003752(45231141, -), ADediting_1003753(45231170, -), ADediting_1003754(45231740, -), ADediting_1003755(45231752, -), ADediting_1003756(45231771, -), ADediting_1003757(45231828, -), ADediting_1003758(45231915, -), ADediting_1003759(45231928, -), ADediting_1003760(45238059, -), ADediting_1003761(45238061, -), ADediting_1003762(45238126, -), ADediting_1571323(45217149, -), ADediting_1642955(45194356, -),

Top

RNA editing positional annotations for KIAA0930 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_1003660chr22_45193983_-UTR3
ADediting_1003661chr22_45194408_-UTR3
ADediting_1003662chr22_45194413_-UTR3
ADediting_1003663chr22_45194414_-UTR3
ADediting_1003664chr22_45194421_-UTR3
ADediting_1003665chr22_45194478_-UTR3
ADediting_1003666chr22_45207886_-intronic
ADediting_1003667chr22_45215946_-intronic
ADediting_1003668chr22_45217098_-intronic
ADediting_1003669chr22_45217117_-intronic
ADediting_1003670chr22_45217140_-intronic
ADediting_1003671chr22_45217143_-intronic
ADediting_1003672chr22_45217178_-intronic
ADediting_1003673chr22_45217195_-intronic
ADediting_1003674chr22_45217198_-intronic
ADediting_1003675chr22_45217239_-intronic
ADediting_1003676chr22_45217249_-intronic
ADediting_1003677chr22_45217252_-intronic
ADediting_1003678chr22_45217278_-intronic
ADediting_1003679chr22_45217279_-intronic
ADediting_1003680chr22_45217298_-intronic
ADediting_1003681chr22_45217304_-intronic
ADediting_1003682chr22_45217309_-intronic
ADediting_1003683chr22_45217330_-intronic
ADediting_1003684chr22_45218185_-intronic
ADediting_1003685chr22_45218189_-intronic
ADediting_1003686chr22_45218230_-intronic
ADediting_1003687chr22_45218234_-intronic
ADediting_1003688chr22_45218254_-intronic
ADediting_1003689chr22_45218260_-intronic
ADediting_1003690chr22_45218263_-intronic
ADediting_1003691chr22_45218296_-intronic
ADediting_1003692chr22_45218304_-intronic
ADediting_1003693chr22_45218322_-intronic
ADediting_1003694chr22_45218325_-intronic
ADediting_1003695chr22_45218416_-intronic
ADediting_1003696chr22_45218456_-intronic
ADediting_1003697chr22_45218457_-intronic
ADediting_1003698chr22_45218463_-intronic
ADediting_1003699chr22_45218473_-intronic
ADediting_1003700chr22_45219679_-intronic
ADediting_1003701chr22_45219680_-intronic
ADediting_1003702chr22_45219684_-intronic
ADediting_1003703chr22_45219689_-intronic
ADediting_1003704chr22_45219705_-intronic
ADediting_1003705chr22_45219706_-intronic
ADediting_1003706chr22_45219716_-intronic
ADediting_1003707chr22_45219769_-intronic
ADediting_1003708chr22_45219770_-intronic
ADediting_1003709chr22_45219774_-intronic
ADediting_1003710chr22_45219837_-intronic
ADediting_1003711chr22_45219879_-intronic
ADediting_1003712chr22_45220196_-intronic
ADediting_1003713chr22_45220202_-intronic
ADediting_1003714chr22_45220208_-intronic
ADediting_1003715chr22_45220236_-intronic
ADediting_1003716chr22_45220261_-intronic
ADediting_1003717chr22_45220290_-intronic
ADediting_1003718chr22_45220315_-intronic
ADediting_1003719chr22_45220343_-intronic
ADediting_1003720chr22_45220354_-intronic
ADediting_1003721chr22_45220355_-intronic
ADediting_1003722chr22_45220368_-intronic
ADediting_1003723chr22_45220369_-intronic
ADediting_1003724chr22_45220372_-intronic
ADediting_1003725chr22_45220392_-intronic
ADediting_1003726chr22_45220393_-intronic
ADediting_1003727chr22_45220696_-intronic
ADediting_1003728chr22_45220841_-intronic
ADediting_1003729chr22_45221820_-intronic
ADediting_1003730chr22_45222007_-intronic
ADediting_1003731chr22_45222358_-intronic
ADediting_1003732chr22_45222554_-intronic
ADediting_1003733chr22_45229974_-intronic
ADediting_1003734chr22_45229979_-intronic
ADediting_1003735chr22_45230650_-intronic
ADediting_1003736chr22_45230653_-intronic
ADediting_1003737chr22_45230678_-intronic
ADediting_1003738chr22_45230679_-intronic
ADediting_1003739chr22_45230710_-intronic
ADediting_1003740chr22_45230750_-intronic
ADediting_1003741chr22_45230760_-intronic
ADediting_1003742chr22_45230761_-intronic
ADediting_1003743chr22_45230775_-intronic
ADediting_1003744chr22_45230830_-intronic
ADediting_1003745chr22_45230831_-intronic
ADediting_1003746chr22_45230852_-intronic
ADediting_1003747chr22_45230853_-intronic
ADediting_1003748chr22_45231004_-intronic
ADediting_1003749chr22_45231005_-intronic
ADediting_1003750chr22_45231085_-intronic
ADediting_1003751chr22_45231131_-intronic
ADediting_1003752chr22_45231141_-intronic
ADediting_1003753chr22_45231170_-intronic
ADediting_1003754chr22_45231740_-intronic
ADediting_1003755chr22_45231752_-intronic
ADediting_1003756chr22_45231771_-intronic
ADediting_1003757chr22_45231828_-intronic
ADediting_1003758chr22_45231915_-intronic
ADediting_1003759chr22_45231928_-intronic
ADediting_1003760chr22_45238059_-intronic
ADediting_1003761chr22_45238061_-intronic
ADediting_1003762chr22_45238126_-intronic
ADediting_1571323chr22_45217149_-intronic
ADediting_1642955chr22_45194356_-UTR3

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_1003667chr22_45215946_-SINEAluName=AluYf1
ADediting_1003668chr22_45217098_-SINEAluName=AluSx1
ADediting_1003669chr22_45217117_-SINEAluName=AluSx1
ADediting_1003670chr22_45217140_-SINEAluName=AluSx1
ADediting_1003671chr22_45217143_-SINEAluName=AluSx1
ADediting_1003672chr22_45217178_-SINEAluName=AluSx1
ADediting_1003673chr22_45217195_-SINEAluName=AluSx1
ADediting_1003674chr22_45217198_-SINEAluName=AluSx1
ADediting_1003675chr22_45217239_-SINEAluName=AluSx1
ADediting_1003676chr22_45217249_-SINEAluName=AluSx1
ADediting_1003677chr22_45217252_-SINEAluName=AluSx1
ADediting_1003678chr22_45217278_-SINEAluName=AluSx1
ADediting_1003679chr22_45217279_-SINEAluName=AluSx1
ADediting_1003680chr22_45217298_-SINEAluName=AluSx1
ADediting_1003681chr22_45217304_-SINEAluName=AluSx1
ADediting_1003682chr22_45217309_-SINEAluName=AluSx1
ADediting_1003683chr22_45217330_-SINEAluName=AluSx1
ADediting_1003684chr22_45218185_-SINEAluName=AluSq2
ADediting_1003685chr22_45218189_-SINEAluName=AluSq2
ADediting_1003686chr22_45218230_-SINEAluName=AluSq2
ADediting_1003687chr22_45218234_-SINEAluName=AluSq2
ADediting_1003688chr22_45218254_-SINEAluName=AluSq2
ADediting_1003689chr22_45218260_-SINEAluName=AluSq2
ADediting_1003690chr22_45218263_-SINEAluName=AluSq2
ADediting_1003691chr22_45218296_-SINEAluName=AluSq2
ADediting_1003692chr22_45218304_-SINEAluName=AluSq2
ADediting_1003693chr22_45218322_-SINEAluName=AluSq2
ADediting_1003694chr22_45218325_-SINEAluName=AluSq2
ADediting_1003695chr22_45218416_-SINEAluName=AluSq2
ADediting_1003696chr22_45218456_-SINEAluName=AluSq2
ADediting_1003697chr22_45218457_-SINEAluName=AluSq2
ADediting_1003698chr22_45218463_-SINEAluName=AluSq2
ADediting_1003699chr22_45218473_-SINEAluName=AluSq2
ADediting_1003700chr22_45219679_-SINEAluName=AluSz
ADediting_1003701chr22_45219680_-SINEAluName=AluSz
ADediting_1003702chr22_45219684_-SINEAluName=AluSz
ADediting_1003703chr22_45219689_-SINEAluName=AluSz
ADediting_1003704chr22_45219705_-SINEAluName=AluSz
ADediting_1003705chr22_45219706_-SINEAluName=AluSz
ADediting_1003706chr22_45219716_-SINEAluName=AluSz
ADediting_1003707chr22_45219769_-SINEAluName=AluSz
ADediting_1003708chr22_45219770_-SINEAluName=AluSz
ADediting_1003709chr22_45219774_-SINEAluName=AluSz
ADediting_1003710chr22_45219837_-SINEAluName=AluSz
ADediting_1003711chr22_45219879_-SINEAluName=AluSz
ADediting_1003712chr22_45220196_-SINEAluName=AluSx1
ADediting_1003713chr22_45220202_-SINEAluName=AluSx1
ADediting_1003714chr22_45220208_-SINEAluName=AluSx1
ADediting_1003715chr22_45220236_-SINEAluName=AluSx1
ADediting_1003716chr22_45220261_-SINEAluName=AluSx1
ADediting_1003717chr22_45220290_-SINEAluName=AluSx1
ADediting_1003718chr22_45220315_-SINEAluName=AluSx1
ADediting_1003719chr22_45220343_-SINEAluName=AluSx1
ADediting_1003720chr22_45220354_-SINEAluName=AluSx1
ADediting_1003721chr22_45220355_-SINEAluName=AluSx1
ADediting_1003722chr22_45220368_-SINEAluName=AluSx1
ADediting_1003723chr22_45220369_-SINEAluName=AluSx1
ADediting_1003724chr22_45220372_-SINEAluName=AluSx1
ADediting_1003725chr22_45220392_-SINEAluName=AluSx1
ADediting_1003726chr22_45220393_-SINEAluName=AluSx1
ADediting_1003727chr22_45220696_-SINEAluName=AluJb
ADediting_1003728chr22_45220841_-SINEAluName=AluJb
ADediting_1003729chr22_45221820_-SINEAluName=AluSq
ADediting_1003730chr22_45222007_-SINEAluName=AluSq
ADediting_1003731chr22_45222358_-SINEAluName=AluJb
ADediting_1003732chr22_45222554_-SINEAluName=AluJb
ADediting_1003733chr22_45229974_-SINEAluName=AluSx1
ADediting_1003734chr22_45229979_-SINEAluName=AluSx1
ADediting_1003735chr22_45230650_-SINEAluName=AluSg
ADediting_1003736chr22_45230653_-SINEAluName=AluSg
ADediting_1003737chr22_45230678_-SINEAluName=AluSg
ADediting_1003738chr22_45230679_-SINEAluName=AluSg
ADediting_1003739chr22_45230710_-SINEAluName=AluSg
ADediting_1003740chr22_45230750_-SINEAluName=AluSg
ADediting_1003741chr22_45230760_-SINEAluName=AluSg
ADediting_1003742chr22_45230761_-SINEAluName=AluSg
ADediting_1003743chr22_45230775_-SINEAluName=AluSg
ADediting_1003744chr22_45230830_-SINEAluName=AluSg
ADediting_1003745chr22_45230831_-SINEAluName=AluSg
ADediting_1003746chr22_45230852_-SINEAluName=AluSg
ADediting_1003747chr22_45230853_-SINEAluName=AluSg
ADediting_1003748chr22_45231004_-SINEAluName=AluSx1
ADediting_1003749chr22_45231005_-SINEAluName=AluSx1
ADediting_1003750chr22_45231085_-SINEAluName=AluSx1
ADediting_1003751chr22_45231131_-SINEAluName=AluSx1
ADediting_1003752chr22_45231141_-SINEAluName=AluSx1
ADediting_1003753chr22_45231170_-SINEAluName=AluSx1
ADediting_1003754chr22_45231740_-SINEAluName=AluY
ADediting_1003755chr22_45231752_-SINEAluName=AluY
ADediting_1003756chr22_45231771_-SINEAluName=AluY
ADediting_1003757chr22_45231828_-SINEAluName=AluY
ADediting_1003758chr22_45231915_-SINEAluName=AluY
ADediting_1003759chr22_45231928_-SINEAluName=AluY
ADediting_1003760chr22_45238059_-SINEAluName=AluSx3
ADediting_1003761chr22_45238061_-SINEAluName=AluSx3
ADediting_1003762chr22_45238126_-SINEAluName=AluSx3
ADediting_1571323chr22_45217149_-SINEAluName=AluSx1
ADediting_1642955chr22_45194356_-SINEAluName=AluSq2

Top

RNA A-to-I editing events in the alternative splicing sites for KIAA0930

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for KIAA0930

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot
boxplot
boxplot
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
ADeditome IDChrPositoingSkipped exonENSGENSTs

Top

Protein coding region RNA A-to-I editings for KIAA0930

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for KIAA0930

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1003660chr22_45193983_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-191-3pchr2245193980451939867mer-m84519397945194002163-33.87
ADediting_1003661chr22_45194408_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-6835-3pchr2245194403451944108mer-1a4519440345194427159-14.47
ADediting_1003665chr22_45194478_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-3934-5pchr2245194478451944847mer-m84519447745194498140-17.36
ADediting_1003665chr22_45194478_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-548aachr2245194473451944797mer-m84519447245194496147-13.47
ADediting_1003665chr22_45194478_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-548ap-3pchr2245194473451944797mer-m84519447245194490140-8.37
ADediting_1003665chr22_45194478_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-548t-3pchr2245194473451944797mer-m84519447245194496147-13.47
ADediting_1642955chr22_45194356_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4634chr2245194352451943587mer-m84519435145194374147-29.32

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1003660chr22_45193983_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-218-5pchr2245193981451939877mer-m84519398045194001150-16.04
ADediting_1003660chr22_45193983_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-5008-3pchr2245193980451939867mer-m84519397945194004150-25.45
ADediting_1003660chr22_45193983_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-7157-3pchr2245193980451939867mer-m84519397945194000143-11.85
ADediting_1003661chr22_45194408_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-548av-5pchr2245194403451944108mer-1a4519440345194420140-8.25
ADediting_1003661chr22_45194408_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-548kchr2245194403451944108mer-1a4519440345194424140-12.1
ADediting_1003661chr22_45194408_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-582-5pchr2245194408451944147mer-m84519440745194429148-9.15
ADediting_1003661chr22_45194408_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-8054chr2245194403451944108mer-1a4519440345194425154-19.02
ADediting_1003662chr22_45194413_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4328chr2245194410451944167mer-m84519440945194428153-15.63
ADediting_1003662chr22_45194413_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-582-5pchr2245194408451944147mer-m84519440745194429148-9.15
ADediting_1003663chr22_45194414_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4328chr2245194410451944167mer-m84519440945194428153-15.63
ADediting_1003664chr22_45194421_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-7160-5pchr2245194419451944257mer-m84519441845194438140-20.51
ADediting_1003665chr22_45194478_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-7844-5pchr2245194474451944807mer-m84519447345194498151-16.5
ADediting_1642955chr22_45194356_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-6807-5pchr2245194356451943627mer-m84519435545194376147-19.63

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_107020chr1_37500952_-ENSG00000100364.18ENST00000251993.11KIAA0930-201hsa-miR-5581-3pchr2245196456451964627mer-m84519645545196478142-21.74
ADediting_107020chr1_37500952_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-5581-3pchr2245196456451964627mer-m84519645545196478142-21.74
ADediting_107020chr1_37500952_-ENSG00000100364.18ENST00000391627.6KIAA0930-203hsa-miR-5581-3pchr2245196456451964627mer-m84519645545196478142-21.74
ADediting_107020chr1_37500952_-ENSG00000100364.18ENST00000423262.5KIAA0930-206hsa-miR-5581-3pchr2245196456451964627mer-m84519645545196478142-21.74
ADediting_1391023chr8_140732605_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-151a-3pchr2245195301451953077mer-m84519530045195320145-19.57
ADediting_1471003chr9_63819626_+ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4477bchr2245193255451932617mer-m84519325445193274150-15.13
ADediting_1471003chr9_63819626_+ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4477bchr2245194467451944737mer-m84519446645194487148-12.49
ADediting_1631458chr19_40282624_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-641chr2245193220451932267mer-m84519321945193242157-20.69
ADediting_1631458chr19_40282624_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-641chr2245193356451933638mer-1a4519335645193381159-20.08
ADediting_1631458chr19_40282624_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-641chr2245193792451937987mer-m84519379145193820158-20.8
ADediting_843620chr2_207754818_+ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4775chr2245192068451920747mer-m84519206745192088156-10.74

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1097295chr3_85385762_+ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-5688chr2245194662451946687mer-m84519466145194682148-11.77
ADediting_1337757chr7_5495852_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-589-3pchr2245195359451953657mer-m84519535845195381148-16.58
ADediting_1556067chr19_40282625_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-641chr2245195540451955478mer-1a4519554045195564155-12.33
ADediting_1631458chr19_40282624_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-641chr2245195540451955478mer-1a4519554045195564155-12.33
ADediting_291761chr11_93733708_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-1304-3pchr2245192031451920377mer-m84519203045192051140-16.93
ADediting_496066chr15_66496985_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4512chr2245193398451934047mer-m84519339745193418140-20.58
ADediting_496066chr15_66496985_-ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-4512chr2245194764451947718mer-1a4519476445194785142-12.28
ADediting_98288chr1_32086990_+ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-5585-3pchr2245190877451908837mer-m84519087645190899143-9.82
ADediting_98289chr1_32086992_+ENSG00000100364.18ENST00000336156.9KIAA0930-202hsa-miR-5585-3pchr2245190877451908837mer-m84519087645190899143-9.82

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for KIAA0930

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000336156.9protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_1003660ENST00000336156.9chr22_45193983_-4474-2932.90-2932.60-2944.70
ADediting_1642955ENST00000336156.9chr22_45194356_-4101-2932.50-2932.60-2944.70
ADediting_1003661ENST00000336156.9chr22_45194408_-4049-2939.30-2932.60-2944.70
ADediting_1003662ENST00000336156.9chr22_45194413_-4044-2939.30-2932.60-2944.70
ADediting_1003663ENST00000336156.9chr22_45194414_-4043-2932.30-2932.60-2944.70
ADediting_1003664ENST00000336156.9chr22_45194421_-4036-2931.80-2932.60-2944.70
ADediting_1003665ENST00000336156.9chr22_45194478_-3979-2932.90-2932.60-2944.70

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for KIAA0930

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STGADediting_1003665chr22_45194478_-0.01123703874945620.2753731426933690.005252860452941320.3019171189112150.447133328055664-0.0840574897510214
DLPFCADediting_1003723chr22_45220369_-0.02496105657431210.1273329610982450.6178474116953470.02844498752552916.57368108811083e-150.423308621884978
DLPFCADediting_1003725chr22_45220392_-0.01829063051155380.1339574811512120.8547473912110310.01043925502624481.94425974843134e-190.48198119871031
DLPFCADediting_1003753chr22_45231170_-0.4378220647059510.04422389900095570.37341508883352-0.05072634475214711.36365130958259e-130.403874654433926

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.98002440146583e-080.3121003787851862.21052368351936e-090.3314177240029875.49164127877428e-440.683358628269602
AC4.03047291514482e-260.6027799169199473.87933473018377e-150.4699248758834733.2887889581207e-340.672056103404533
PCC0.01219189578651120.1810539727722450.0164691239550490.1733604289780257.94185471717902e-100.426127145448303
CER0.4436028892381570.06301868230921720.003965046130428130.2339113413138964.8621577251586e-100.480547291389546
TCX0.8924082614759680.01113655138241140.00262082909146307-0.2440029176881374.02449384252038e-130.54779196909427
FP2.65787799861069e-080.4020392971434240.00532775356665330.208034028783226.52183402531305e-080.391509466840844
IFG0.0001059109178432440.6976560203178750.0001510067564360250.6864998200194680.0002152358718436820.674854072002168
PG0.6583275824368460.03263676386405950.103397995031060.1197918025684542.43834520923005e-100.442945107130626
STG1.9420101722187e-070.5317417663415430.0001734912767656740.3985416368933031.13013890085635e-060.502224148788084

Top

Relation with AD stages for KIAA0930

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
TCXADediting_1003668chr22_45217098_-0.00075662997692376-0.322198123518124

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
PCC1.11862142847486e-050.311937390932982
CER3.10178018408453e-060.431627327305658
TCX0.0001041630286922360.367974342272551

Top

RelatedDrugs for KIAA0930

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for KIAA0930

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource