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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for ERCC1 |
 Gene summary |
| Gene information | Gene symbol | ERCC1 | Gene ID | 2067 |
| Gene name | ERCC excision repair 1, endonuclease non-catalytic subunit | |
| Synonyms | COFS4|RAD10|UV20 | |
| Cytomap | 19q13.32 | |
| Type of gene | protein-coding | |
| Description | DNA excision repair protein ERCC-1excision repair cross-complementation group 1excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) | |
| Modification date | 20200329 | |
| UniProtAcc | P07992, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| ERCC1 | GO:0006289 | nucleotide-excision repair | 3290851 |
Top |
RNA A-to-I events for ERCC1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_761793(45410881, -), ADediting_761794(45410891, -), ADediting_761795(45410892, -), ADediting_761796(45410952, -), ADediting_761797(45410961, -), ADediting_761798(45410962, -), ADediting_761799(45410992, -), ADediting_761800(45411027, -), ADediting_761801(45411042, -), ADediting_761802(45411048, -), ADediting_761803(45411051, -), ADediting_761804(45411061, -), ADediting_761805(45411091, -), ADediting_761806(45411096, -), ADediting_761807(45411537, -), ADediting_761808(45411549, -), ADediting_761809(45411564, -), ADediting_761810(45411568, -), ADediting_761811(45411572, -), ADediting_761812(45411589, -), ADediting_761813(45411628, -), ADediting_761814(45411631, -), ADediting_761815(45411646, -), ADediting_761816(45411650, -), ADediting_761817(45411666, -), ADediting_761818(45411670, -), ADediting_761819(45411672, -), ADediting_761820(45411682, -), ADediting_761821(45411694, -), ADediting_761822(45411711, -), ADediting_761823(45411731, -), ADediting_761824(45411750, -), ADediting_761825(45411755, -), ADediting_761826(45411792, -), ADediting_761827(45411892, -), ADediting_761828(45411917, -), ADediting_761829(45411942, -), ADediting_761830(45411985, -), ADediting_761831(45411995, -), ADediting_761832(45412001, -), ADediting_761833(45412054, -), ADediting_761834(45412064, -), ADediting_761835(45412126, -), ADediting_761836(45412131, -), ADediting_761837(45412132, -), ADediting_761838(45412140, -), ADediting_761839(45412219, -), ADediting_761840(45412224, -), ADediting_761841(45412225, -), ADediting_761842(45412256, -), ADediting_761843(45412270, -), ADediting_761844(45412287, -), ADediting_761845(45412323, -), ADediting_761846(45412327, -), ADediting_761847(45412329, -), ADediting_761848(45412341, -), ADediting_761849(45412352, -), ADediting_761850(45412401, -), ADediting_761851(45412426, -), ADediting_761852(45412431, -), ADediting_761853(45412448, -), ADediting_761854(45412808, -), ADediting_761855(45412851, -), ADediting_761856(45412868, -), ADediting_761857(45412878, -), ADediting_761858(45412968, -), ADediting_761859(45412973, -), ADediting_761860(45412978, -), ADediting_761861(45413008, -), ADediting_761862(45413013, -), ADediting_761863(45413014, -), ADediting_761864(45413321, -), ADediting_761865(45413405, -), ADediting_761866(45413457, -), ADediting_761867(45413458, -), ADediting_761868(45413527, -), ADediting_761869(45414438, -), ADediting_761870(45415918, -), ADediting_761871(45416997, -), ADediting_761872(45417002, -), ADediting_761873(45417059, -), ADediting_761874(45417083, -), ADediting_761875(45417762, -), ADediting_761876(45417767, -), ADediting_761877(45417768, -), ADediting_761878(45417772, -), ADediting_761879(45417775, -), ADediting_761880(45417796, -), ADediting_761881(45417811, -), ADediting_761882(45417824, -), ADediting_761883(45417828, -), ADediting_761884(45417838, -), ADediting_761885(45417840, -), ADediting_761886(45417891, -), ADediting_761887(45417918, -), ADediting_761888(45417919, -), ADediting_761889(45418039, -), ADediting_761890(45418156, -), ADediting_761891(45418165, -), ADediting_761892(45418225, -), ADediting_761893(45418237, -), ADediting_761894(45418239, -), ADediting_761895(45418240, -), ADediting_761896(45418267, -), ADediting_761897(45418302, -), ADediting_761898(45418311, -), ADediting_761899(45418343, -), ADediting_761900(45418468, -), ADediting_761901(45418481, -), ADediting_761902(45418517, -), ADediting_761903(45418740, -), ADediting_761904(45418741, -), ADediting_761905(45418784, -), ADediting_761906(45421524, -), ADediting_761907(45421545, -), ADediting_761908(45421587, -), ADediting_761909(45421731, -), ADediting_761910(45421826, -), ADediting_761911(45421827, -), ADediting_761912(45421897, -), ADediting_761913(45421912, -), ADediting_761914(45422509, -), ADediting_761915(45422528, -), ADediting_761916(45422529, -), ADediting_761917(45422555, -), ADediting_761918(45422599, -), ADediting_761919(45422602, -), ADediting_761920(45422608, -), ADediting_761921(45422674, -), ADediting_761922(45422675, -), ADediting_761923(45424994, -), ADediting_761924(45425517, -), ADediting_761925(45425527, -), ADediting_761926(45425596, -), ADediting_761927(45425993, -), ADediting_761928(45426897, -), ADediting_761929(45426900, -), ADediting_761930(45427043, -), ADediting_761931(45427353, -), ADediting_761932(45428144, -), ADediting_761933(45428243, -), ADediting_761934(45430656, -), ADediting_761935(45430713, -), ADediting_761936(45430789, -), ADediting_761937(45430805, -), ADediting_761938(45430809, -), ADediting_761939(45430822, -), ADediting_761940(45430850, -), ADediting_761941(45430855, -), ADediting_761942(45430860, -), ADediting_761943(45431511, -), ADediting_761944(45432040, -), ADediting_761945(45432068, -), ADediting_761946(45432069, -), ADediting_761947(45432741, -), ADediting_761948(45432958, -), ADediting_761949(45434408, -), ADediting_761950(45434478, -), ADediting_761951(45434646, -), ADediting_761952(45434682, -), ADediting_761953(45434697, -), ADediting_761954(45434724, -), ADediting_761955(45435654, -), ADediting_761956(45435846, -), ADediting_761957(45436382, -), ADediting_761958(45436462, -), ADediting_761959(45436857, -), ADediting_761960(45436993, -), ADediting_761961(45437127, -), ADediting_761962(45437187, -), ADediting_761963(45438585, -), ADediting_761964(45438714, -), ADediting_761965(45438920, -), ADediting_761966(45439037, -), ADediting_761967(45439038, -), ADediting_761968(45439048, -), ADediting_761969(45439051, -), ADediting_761970(45439062, -), ADediting_761971(45439064, -), ADediting_761972(45439074, -), ADediting_761973(45440872, -), ADediting_761974(45440981, -), ADediting_761975(45441525, -), ADediting_761976(45441571, -), ADediting_761977(45441816, -), ADediting_761978(45441847, -), ADediting_761979(45442129, -), ADediting_761980(45442216, -), ADediting_761981(45442257, -), ADediting_761982(45445154, -), ADediting_761983(45446017, -), ADediting_761984(45446127, -), ADediting_761985(45446132, -), ADediting_761986(45446743, -), ADediting_761987(45446755, -), ADediting_761988(45446806, -), ADediting_761989(45446815, -), ADediting_761990(45446832, -), ADediting_761991(45446841, -), ADediting_761992(45446850, -), ADediting_761993(45446886, -), ADediting_761994(45446914, -), ADediting_761995(45446915, -), ADediting_761996(45446959, -), ADediting_761997(45446984, -), ADediting_761998(45447057, -), ADediting_761999(45447343, -), ADediting_762000(45447414, -), ADediting_762001(45447493, -), ADediting_762002(45447494, -), ADediting_762003(45447547, -), ADediting_762004(45447548, -), ADediting_762007(45448036, -), ADediting_762008(45448065, -), ADediting_762011(45448138, -), ADediting_762012(45448144, -), ADediting_762013(45448145, -), ADediting_762015(45448631, -), ADediting_762016(45450513, -), ADediting_762017(45450525, -), ADediting_762018(45450582, -), ADediting_762019(45450607, -), ADediting_762020(45450613, -), ADediting_762021(45450644, -), ADediting_762022(45450654, -), ADediting_762023(45450703, -), ADediting_762024(45450719, -), ADediting_762033(45476949, -), ADediting_1556699(45410876, -), ADediting_1556700(45411043, -), ADediting_1556701(45412062, -), ADediting_1556702(45413395, -), ADediting_1556703(45414463, -), ADediting_1556704(45415843, -), |
Top |
RNA editing positional annotations for ERCC1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_761793 | chr19_45410881_- | intronic |
| ADediting_761794 | chr19_45410891_- | intronic |
| ADediting_761795 | chr19_45410892_- | intronic |
| ADediting_761796 | chr19_45410952_- | intronic |
| ADediting_761797 | chr19_45410961_- | intronic |
| ADediting_761798 | chr19_45410962_- | intronic |
| ADediting_761799 | chr19_45410992_- | intronic |
| ADediting_761800 | chr19_45411027_- | intronic |
| ADediting_761801 | chr19_45411042_- | intronic |
| ADediting_761802 | chr19_45411048_- | intronic |
| ADediting_761803 | chr19_45411051_- | intronic |
| ADediting_761804 | chr19_45411061_- | intronic |
| ADediting_761805 | chr19_45411091_- | intronic |
| ADediting_761806 | chr19_45411096_- | intronic |
| ADediting_761807 | chr19_45411537_- | intronic |
| ADediting_761808 | chr19_45411549_- | intronic |
| ADediting_761809 | chr19_45411564_- | intronic |
| ADediting_761810 | chr19_45411568_- | intronic |
| ADediting_761811 | chr19_45411572_- | intronic |
| ADediting_761812 | chr19_45411589_- | intronic |
| ADediting_761813 | chr19_45411628_- | intronic |
| ADediting_761814 | chr19_45411631_- | intronic |
| ADediting_761815 | chr19_45411646_- | intronic |
| ADediting_761816 | chr19_45411650_- | intronic |
| ADediting_761817 | chr19_45411666_- | intronic |
| ADediting_761818 | chr19_45411670_- | intronic |
| ADediting_761819 | chr19_45411672_- | intronic |
| ADediting_761820 | chr19_45411682_- | intronic |
| ADediting_761821 | chr19_45411694_- | intronic |
| ADediting_761822 | chr19_45411711_- | intronic |
| ADediting_761823 | chr19_45411731_- | intronic |
| ADediting_761824 | chr19_45411750_- | intronic |
| ADediting_761825 | chr19_45411755_- | intronic |
| ADediting_761826 | chr19_45411792_- | intronic |
| ADediting_761827 | chr19_45411892_- | intronic |
| ADediting_761828 | chr19_45411917_- | intronic |
| ADediting_761829 | chr19_45411942_- | intronic |
| ADediting_761830 | chr19_45411985_- | intronic |
| ADediting_761831 | chr19_45411995_- | intronic |
| ADediting_761832 | chr19_45412001_- | intronic |
| ADediting_761833 | chr19_45412054_- | intronic |
| ADediting_761834 | chr19_45412064_- | intronic |
| ADediting_761835 | chr19_45412126_- | intronic |
| ADediting_761836 | chr19_45412131_- | intronic |
| ADediting_761837 | chr19_45412132_- | intronic |
| ADediting_761838 | chr19_45412140_- | intronic |
| ADediting_761839 | chr19_45412219_- | intronic |
| ADediting_761840 | chr19_45412224_- | intronic |
| ADediting_761841 | chr19_45412225_- | intronic |
| ADediting_761842 | chr19_45412256_- | intronic |
| ADediting_761843 | chr19_45412270_- | intronic |
| ADediting_761844 | chr19_45412287_- | intronic |
| ADediting_761845 | chr19_45412323_- | intronic |
| ADediting_761846 | chr19_45412327_- | intronic |
| ADediting_761847 | chr19_45412329_- | intronic |
| ADediting_761848 | chr19_45412341_- | intronic |
| ADediting_761849 | chr19_45412352_- | intronic |
| ADediting_761850 | chr19_45412401_- | intronic |
| ADediting_761851 | chr19_45412426_- | intronic |
| ADediting_761852 | chr19_45412431_- | intronic |
| ADediting_761853 | chr19_45412448_- | intronic |
| ADediting_761854 | chr19_45412808_- | intronic |
| ADediting_761855 | chr19_45412851_- | intronic |
| ADediting_761856 | chr19_45412868_- | intronic |
| ADediting_761857 | chr19_45412878_- | intronic |
| ADediting_761858 | chr19_45412968_- | intronic |
| ADediting_761859 | chr19_45412973_- | intronic |
| ADediting_761860 | chr19_45412978_- | intronic |
| ADediting_761861 | chr19_45413008_- | intronic |
| ADediting_761862 | chr19_45413013_- | intronic |
| ADediting_761863 | chr19_45413014_- | intronic |
| ADediting_761864 | chr19_45413321_- | intronic |
| ADediting_761865 | chr19_45413405_- | intronic |
| ADediting_761866 | chr19_45413457_- | UTR3 |
| ADediting_761867 | chr19_45413458_- | UTR3 |
| ADediting_761868 | chr19_45413527_- | UTR3 |
| ADediting_761869 | chr19_45414438_- | intronic |
| ADediting_761870 | chr19_45415918_- | intronic |
| ADediting_761871 | chr19_45416997_- | intronic |
| ADediting_761872 | chr19_45417002_- | intronic |
| ADediting_761873 | chr19_45417059_- | intronic |
| ADediting_761874 | chr19_45417083_- | intronic |
| ADediting_761875 | chr19_45417762_- | intronic |
| ADediting_761876 | chr19_45417767_- | intronic |
| ADediting_761877 | chr19_45417768_- | intronic |
| ADediting_761878 | chr19_45417772_- | intronic |
| ADediting_761879 | chr19_45417775_- | intronic |
| ADediting_761880 | chr19_45417796_- | intronic |
| ADediting_761881 | chr19_45417811_- | intronic |
| ADediting_761882 | chr19_45417824_- | intronic |
| ADediting_761883 | chr19_45417828_- | intronic |
| ADediting_761884 | chr19_45417838_- | intronic |
| ADediting_761885 | chr19_45417840_- | intronic |
| ADediting_761886 | chr19_45417891_- | intronic |
| ADediting_761887 | chr19_45417918_- | intronic |
| ADediting_761888 | chr19_45417919_- | intronic |
| ADediting_761889 | chr19_45418039_- | intronic |
| ADediting_761890 | chr19_45418156_- | intronic |
| ADediting_761891 | chr19_45418165_- | intronic |
| ADediting_761892 | chr19_45418225_- | intronic |
| ADediting_761893 | chr19_45418237_- | intronic |
| ADediting_761894 | chr19_45418239_- | intronic |
| ADediting_761895 | chr19_45418240_- | intronic |
| ADediting_761896 | chr19_45418267_- | intronic |
| ADediting_761897 | chr19_45418302_- | intronic |
| ADediting_761898 | chr19_45418311_- | intronic |
| ADediting_761899 | chr19_45418343_- | intronic |
| ADediting_761900 | chr19_45418468_- | intronic |
| ADediting_761901 | chr19_45418481_- | intronic |
| ADediting_761902 | chr19_45418517_- | intronic |
| ADediting_761903 | chr19_45418740_- | intronic |
| ADediting_761904 | chr19_45418741_- | intronic |
| ADediting_761905 | chr19_45418784_- | intronic |
| ADediting_761906 | chr19_45421524_- | intronic |
| ADediting_761907 | chr19_45421545_- | intronic |
| ADediting_761908 | chr19_45421587_- | intronic |
| ADediting_761909 | chr19_45421731_- | intronic |
| ADediting_761910 | chr19_45421826_- | intronic |
| ADediting_761911 | chr19_45421827_- | intronic |
| ADediting_761912 | chr19_45421897_- | intronic |
| ADediting_761913 | chr19_45421912_- | intronic |
| ADediting_761914 | chr19_45422509_- | intronic |
| ADediting_761915 | chr19_45422528_- | intronic |
| ADediting_761916 | chr19_45422529_- | intronic |
| ADediting_761917 | chr19_45422555_- | intronic |
| ADediting_761918 | chr19_45422599_- | intronic |
| ADediting_761919 | chr19_45422602_- | intronic |
| ADediting_761920 | chr19_45422608_- | intronic |
| ADediting_761921 | chr19_45422674_- | intronic |
| ADediting_761922 | chr19_45422675_- | intronic |
| ADediting_761923 | chr19_45424994_- | intronic |
| ADediting_761924 | chr19_45425517_- | intronic |
| ADediting_761925 | chr19_45425527_- | intronic |
| ADediting_761926 | chr19_45425596_- | intronic |
| ADediting_761927 | chr19_45425993_- | intronic |
| ADediting_761928 | chr19_45426897_- | intronic |
| ADediting_761929 | chr19_45426900_- | intronic |
| ADediting_761930 | chr19_45427043_- | intronic |
| ADediting_761931 | chr19_45427353_- | intronic |
| ADediting_761932 | chr19_45428144_- | intronic |
| ADediting_761933 | chr19_45428243_- | intronic |
| ADediting_761934 | chr19_45430656_- | intronic |
| ADediting_761935 | chr19_45430713_- | intronic |
| ADediting_761936 | chr19_45430789_- | intronic |
| ADediting_761937 | chr19_45430805_- | intronic |
| ADediting_761938 | chr19_45430809_- | intronic |
| ADediting_761939 | chr19_45430822_- | intronic |
| ADediting_761940 | chr19_45430850_- | intronic |
| ADediting_761941 | chr19_45430855_- | intronic |
| ADediting_761942 | chr19_45430860_- | intronic |
| ADediting_761943 | chr19_45431511_- | intronic |
| ADediting_761944 | chr19_45432040_- | intronic |
| ADediting_761945 | chr19_45432068_- | intronic |
| ADediting_761946 | chr19_45432069_- | intronic |
| ADediting_761947 | chr19_45432741_- | intronic |
| ADediting_761948 | chr19_45432958_- | intronic |
| ADediting_761949 | chr19_45434408_- | intronic |
| ADediting_761950 | chr19_45434478_- | intronic |
| ADediting_761951 | chr19_45434646_- | intronic |
| ADediting_761952 | chr19_45434682_- | intronic |
| ADediting_761953 | chr19_45434697_- | intronic |
| ADediting_761954 | chr19_45434724_- | intronic |
| ADediting_761955 | chr19_45435654_- | intronic |
| ADediting_761956 | chr19_45435846_- | intronic |
| ADediting_761957 | chr19_45436382_- | intronic |
| ADediting_761958 | chr19_45436462_- | intronic |
| ADediting_761959 | chr19_45436857_- | intronic |
| ADediting_761960 | chr19_45436993_- | intronic |
| ADediting_761961 | chr19_45437127_- | intronic |
| ADediting_761962 | chr19_45437187_- | intronic |
| ADediting_761963 | chr19_45438585_- | intronic |
| ADediting_761964 | chr19_45438714_- | intronic |
| ADediting_761965 | chr19_45438920_- | intronic |
| ADediting_761966 | chr19_45439037_- | intronic |
| ADediting_761967 | chr19_45439038_- | intronic |
| ADediting_761968 | chr19_45439048_- | intronic |
| ADediting_761969 | chr19_45439051_- | intronic |
| ADediting_761970 | chr19_45439062_- | intronic |
| ADediting_761971 | chr19_45439064_- | intronic |
| ADediting_761972 | chr19_45439074_- | intronic |
| ADediting_761973 | chr19_45440872_- | intronic |
| ADediting_761974 | chr19_45440981_- | intronic |
| ADediting_761975 | chr19_45441525_- | intronic |
| ADediting_761976 | chr19_45441571_- | intronic |
| ADediting_761977 | chr19_45441816_- | intronic |
| ADediting_761978 | chr19_45441847_- | intronic |
| ADediting_761979 | chr19_45442129_- | intronic |
| ADediting_761980 | chr19_45442216_- | intronic |
| ADediting_761981 | chr19_45442257_- | intronic |
| ADediting_761982 | chr19_45445154_- | intronic |
| ADediting_761983 | chr19_45446017_- | intronic |
| ADediting_761984 | chr19_45446127_- | intronic |
| ADediting_761985 | chr19_45446132_- | intronic |
| ADediting_761986 | chr19_45446743_- | intronic |
| ADediting_761987 | chr19_45446755_- | intronic |
| ADediting_761988 | chr19_45446806_- | intronic |
| ADediting_761989 | chr19_45446815_- | intronic |
| ADediting_761990 | chr19_45446832_- | intronic |
| ADediting_761991 | chr19_45446841_- | intronic |
| ADediting_761992 | chr19_45446850_- | intronic |
| ADediting_761993 | chr19_45446886_- | intronic |
| ADediting_761994 | chr19_45446914_- | intronic |
| ADediting_761995 | chr19_45446915_- | intronic |
| ADediting_761996 | chr19_45446959_- | intronic |
| ADediting_761997 | chr19_45446984_- | intronic |
| ADediting_761998 | chr19_45447057_- | intronic |
| ADediting_761999 | chr19_45447343_- | intronic |
| ADediting_762000 | chr19_45447414_- | intronic |
| ADediting_762001 | chr19_45447493_- | intronic |
| ADediting_762002 | chr19_45447494_- | intronic |
| ADediting_762003 | chr19_45447547_- | intronic |
| ADediting_762004 | chr19_45447548_- | intronic |
| ADediting_762007 | chr19_45448036_- | intronic |
| ADediting_762008 | chr19_45448065_- | intronic |
| ADediting_762011 | chr19_45448138_- | intronic |
| ADediting_762012 | chr19_45448144_- | intronic |
| ADediting_762013 | chr19_45448145_- | intronic |
| ADediting_762015 | chr19_45448631_- | intronic |
| ADediting_762016 | chr19_45450513_- | intronic |
| ADediting_762017 | chr19_45450525_- | intronic |
| ADediting_762018 | chr19_45450582_- | intronic |
| ADediting_762019 | chr19_45450607_- | intronic |
| ADediting_762020 | chr19_45450613_- | intronic |
| ADediting_762021 | chr19_45450644_- | UTR5 |
| ADediting_762022 | chr19_45450654_- | UTR5 |
| ADediting_762023 | chr19_45450703_- | UTR5 |
| ADediting_762024 | chr19_45450719_- | UTR5 |
| ADediting_762033 | chr19_45476949_- | intronic |
| ADediting_1556699 | chr19_45410876_- | intronic |
| ADediting_1556700 | chr19_45411043_- | intronic |
| ADediting_1556701 | chr19_45412062_- | intronic |
| ADediting_1556702 | chr19_45413395_- | intronic |
| ADediting_1556703 | chr19_45414463_- | intronic |
| ADediting_1556704 | chr19_45415843_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_761793 | chr19_45410881_- | SINE | Alu | Name=AluSz |
| ADediting_761794 | chr19_45410891_- | SINE | Alu | Name=AluSz |
| ADediting_761795 | chr19_45410892_- | SINE | Alu | Name=AluSz |
| ADediting_761796 | chr19_45410952_- | SINE | Alu | Name=AluSz |
| ADediting_761797 | chr19_45410961_- | SINE | Alu | Name=AluSz |
| ADediting_761798 | chr19_45410962_- | SINE | Alu | Name=AluSz |
| ADediting_761799 | chr19_45410992_- | SINE | Alu | Name=AluSz |
| ADediting_761800 | chr19_45411027_- | SINE | Alu | Name=AluSz |
| ADediting_761801 | chr19_45411042_- | SINE | Alu | Name=AluSz |
| ADediting_761802 | chr19_45411048_- | SINE | Alu | Name=AluSz |
| ADediting_761803 | chr19_45411051_- | SINE | Alu | Name=AluSz |
| ADediting_761804 | chr19_45411061_- | SINE | Alu | Name=AluSz |
| ADediting_761805 | chr19_45411091_- | SINE | Alu | Name=AluSz |
| ADediting_761806 | chr19_45411096_- | SINE | Alu | Name=AluSz |
| ADediting_761807 | chr19_45411537_- | SINE | Alu | Name=AluSx1 |
| ADediting_761808 | chr19_45411549_- | SINE | Alu | Name=AluSx1 |
| ADediting_761809 | chr19_45411564_- | SINE | Alu | Name=AluSx1 |
| ADediting_761810 | chr19_45411568_- | SINE | Alu | Name=AluSx1 |
| ADediting_761811 | chr19_45411572_- | SINE | Alu | Name=AluSx1 |
| ADediting_761812 | chr19_45411589_- | SINE | Alu | Name=AluSx1 |
| ADediting_761813 | chr19_45411628_- | SINE | Alu | Name=AluSx1 |
| ADediting_761814 | chr19_45411631_- | SINE | Alu | Name=AluSx1 |
| ADediting_761815 | chr19_45411646_- | SINE | Alu | Name=AluSx1 |
| ADediting_761816 | chr19_45411650_- | SINE | Alu | Name=AluSx1 |
| ADediting_761817 | chr19_45411666_- | SINE | Alu | Name=AluSx1 |
| ADediting_761818 | chr19_45411670_- | SINE | Alu | Name=AluSx1 |
| ADediting_761819 | chr19_45411672_- | SINE | Alu | Name=AluSx1 |
| ADediting_761820 | chr19_45411682_- | SINE | Alu | Name=AluSx1 |
| ADediting_761821 | chr19_45411694_- | SINE | Alu | Name=AluSx1 |
| ADediting_761822 | chr19_45411711_- | SINE | Alu | Name=AluSx1 |
| ADediting_761823 | chr19_45411731_- | SINE | Alu | Name=AluSx1 |
| ADediting_761824 | chr19_45411750_- | SINE | Alu | Name=AluSx1 |
| ADediting_761825 | chr19_45411755_- | SINE | Alu | Name=AluSx1 |
| ADediting_761826 | chr19_45411792_- | SINE | Alu | Name=AluSx1 |
| ADediting_761827 | chr19_45411892_- | SINE | Alu | Name=AluY |
| ADediting_761828 | chr19_45411917_- | SINE | Alu | Name=AluY |
| ADediting_761829 | chr19_45411942_- | SINE | Alu | Name=AluY |
| ADediting_761830 | chr19_45411985_- | SINE | Alu | Name=AluY |
| ADediting_761831 | chr19_45411995_- | SINE | Alu | Name=AluY |
| ADediting_761832 | chr19_45412001_- | SINE | Alu | Name=AluY |
| ADediting_761833 | chr19_45412054_- | SINE | Alu | Name=AluY |
| ADediting_761834 | chr19_45412064_- | SINE | Alu | Name=AluY |
| ADediting_761835 | chr19_45412126_- | SINE | Alu | Name=AluY |
| ADediting_761836 | chr19_45412131_- | SINE | Alu | Name=AluY |
| ADediting_761837 | chr19_45412132_- | SINE | Alu | Name=AluY |
| ADediting_761838 | chr19_45412140_- | SINE | Alu | Name=AluY |
| ADediting_761839 | chr19_45412219_- | SINE | Alu | Name=AluSz |
| ADediting_761840 | chr19_45412224_- | SINE | Alu | Name=AluSz |
| ADediting_761841 | chr19_45412225_- | SINE | Alu | Name=AluSz |
| ADediting_761842 | chr19_45412256_- | SINE | Alu | Name=AluSz |
| ADediting_761843 | chr19_45412270_- | SINE | Alu | Name=AluSz |
| ADediting_761844 | chr19_45412287_- | SINE | Alu | Name=AluSz |
| ADediting_761845 | chr19_45412323_- | SINE | Alu | Name=AluSz |
| ADediting_761846 | chr19_45412327_- | SINE | Alu | Name=AluSz |
| ADediting_761847 | chr19_45412329_- | SINE | Alu | Name=AluSz |
| ADediting_761848 | chr19_45412341_- | SINE | Alu | Name=AluSz |
| ADediting_761849 | chr19_45412352_- | SINE | Alu | Name=AluSz |
| ADediting_761850 | chr19_45412401_- | SINE | Alu | Name=AluSz |
| ADediting_761851 | chr19_45412426_- | SINE | Alu | Name=AluSz |
| ADediting_761852 | chr19_45412431_- | SINE | Alu | Name=AluSz |
| ADediting_761853 | chr19_45412448_- | SINE | Alu | Name=AluSz |
| ADediting_761854 | chr19_45412808_- | SINE | Alu | Name=AluSp |
| ADediting_761855 | chr19_45412851_- | SINE | Alu | Name=AluSp |
| ADediting_761856 | chr19_45412868_- | SINE | Alu | Name=AluSp |
| ADediting_761857 | chr19_45412878_- | SINE | Alu | Name=AluSp |
| ADediting_761858 | chr19_45412968_- | SINE | Alu | Name=AluSp |
| ADediting_761859 | chr19_45412973_- | SINE | Alu | Name=AluSp |
| ADediting_761860 | chr19_45412978_- | SINE | Alu | Name=AluSp |
| ADediting_761861 | chr19_45413008_- | SINE | Alu | Name=AluSp |
| ADediting_761862 | chr19_45413013_- | SINE | Alu | Name=AluSp |
| ADediting_761863 | chr19_45413014_- | SINE | Alu | Name=AluSp |
| ADediting_761864 | chr19_45413321_- | SINE | Alu | Name=AluJr |
| ADediting_761865 | chr19_45413405_- | SINE | Alu | Name=AluJr |
| ADediting_761866 | chr19_45413457_- | SINE | Alu | Name=AluJr |
| ADediting_761867 | chr19_45413458_- | SINE | Alu | Name=AluJr |
| ADediting_761868 | chr19_45413527_- | SINE | Alu | Name=AluJr |
| ADediting_761869 | chr19_45414438_- | SINE | Alu | Name=AluSx1 |
| ADediting_761870 | chr19_45415918_- | SINE | Alu | Name=AluJb |
| ADediting_761871 | chr19_45416997_- | SINE | Alu | Name=AluSx1 |
| ADediting_761872 | chr19_45417002_- | SINE | Alu | Name=AluSx1 |
| ADediting_761873 | chr19_45417059_- | SINE | Alu | Name=AluSx1 |
| ADediting_761874 | chr19_45417083_- | SINE | Alu | Name=AluSx1 |
| ADediting_761875 | chr19_45417762_- | SINE | Alu | Name=AluSx1 |
| ADediting_761876 | chr19_45417767_- | SINE | Alu | Name=AluSx1 |
| ADediting_761877 | chr19_45417768_- | SINE | Alu | Name=AluSx1 |
| ADediting_761878 | chr19_45417772_- | SINE | Alu | Name=AluSx1 |
| ADediting_761879 | chr19_45417775_- | SINE | Alu | Name=AluSx1 |
| ADediting_761880 | chr19_45417796_- | SINE | Alu | Name=AluSx1 |
| ADediting_761881 | chr19_45417811_- | SINE | Alu | Name=AluSx1 |
| ADediting_761882 | chr19_45417824_- | SINE | Alu | Name=AluSx1 |
| ADediting_761883 | chr19_45417828_- | SINE | Alu | Name=AluSx1 |
| ADediting_761884 | chr19_45417838_- | SINE | Alu | Name=AluSx1 |
| ADediting_761885 | chr19_45417840_- | SINE | Alu | Name=AluSx1 |
| ADediting_761886 | chr19_45417891_- | SINE | Alu | Name=AluSx1 |
| ADediting_761887 | chr19_45417918_- | SINE | Alu | Name=AluSx1 |
| ADediting_761888 | chr19_45417919_- | SINE | Alu | Name=AluSx1 |
| ADediting_761889 | chr19_45418039_- | SINE | Alu | Name=AluSz6 |
| ADediting_761890 | chr19_45418156_- | SINE | Alu | Name=AluSx |
| ADediting_761891 | chr19_45418165_- | SINE | Alu | Name=AluSx |
| ADediting_761892 | chr19_45418225_- | SINE | Alu | Name=AluSx |
| ADediting_761893 | chr19_45418237_- | SINE | Alu | Name=AluSx |
| ADediting_761894 | chr19_45418239_- | SINE | Alu | Name=AluSx |
| ADediting_761895 | chr19_45418240_- | SINE | Alu | Name=AluSx |
| ADediting_761896 | chr19_45418267_- | SINE | Alu | Name=AluSx |
| ADediting_761897 | chr19_45418302_- | SINE | Alu | Name=AluSx |
| ADediting_761898 | chr19_45418311_- | SINE | Alu | Name=AluSx |
| ADediting_761899 | chr19_45418343_- | SINE | Alu | Name=AluSx |
| ADediting_761900 | chr19_45418468_- | SINE | Alu | Name=AluSz6 |
| ADediting_761901 | chr19_45418481_- | SINE | Alu | Name=AluSz6 |
| ADediting_761902 | chr19_45418517_- | SINE | Alu | Name=AluSz6 |
| ADediting_761903 | chr19_45418740_- | SINE | Alu | Name=AluSq2 |
| ADediting_761904 | chr19_45418741_- | SINE | Alu | Name=AluSq2 |
| ADediting_761905 | chr19_45418784_- | SINE | Alu | Name=AluSq2 |
| ADediting_761906 | chr19_45421524_- | SINE | Alu | Name=AluSg7 |
| ADediting_761907 | chr19_45421545_- | SINE | Alu | Name=AluSg7 |
| ADediting_761908 | chr19_45421587_- | SINE | Alu | Name=AluSg7 |
| ADediting_761909 | chr19_45421731_- | SINE | Alu | Name=AluSx |
| ADediting_761910 | chr19_45421826_- | SINE | Alu | Name=AluSx |
| ADediting_761911 | chr19_45421827_- | SINE | Alu | Name=AluSx |
| ADediting_761912 | chr19_45421897_- | SINE | Alu | Name=AluSx |
| ADediting_761913 | chr19_45421912_- | SINE | Alu | Name=AluSx |
| ADediting_761914 | chr19_45422509_- | SINE | Alu | Name=AluSz |
| ADediting_761915 | chr19_45422528_- | SINE | Alu | Name=AluSz |
| ADediting_761916 | chr19_45422529_- | SINE | Alu | Name=AluSz |
| ADediting_761917 | chr19_45422555_- | SINE | Alu | Name=AluSz |
| ADediting_761918 | chr19_45422599_- | SINE | Alu | Name=AluSz |
| ADediting_761919 | chr19_45422602_- | SINE | Alu | Name=AluSz |
| ADediting_761920 | chr19_45422608_- | SINE | Alu | Name=AluSz |
| ADediting_761921 | chr19_45422674_- | SINE | Alu | Name=AluSz |
| ADediting_761922 | chr19_45422675_- | SINE | Alu | Name=AluSz |
| ADediting_761923 | chr19_45424994_- | SINE | Alu | Name=AluSq2 |
| ADediting_761924 | chr19_45425517_- | SINE | Alu | Name=AluSq2 |
| ADediting_761925 | chr19_45425527_- | SINE | Alu | Name=AluSq2 |
| ADediting_761926 | chr19_45425596_- | SINE | Alu | Name=AluSq2 |
| ADediting_761927 | chr19_45425993_- | SINE | Alu | Name=AluSp |
| ADediting_761928 | chr19_45426897_- | SINE | Alu | Name=AluSq2 |
| ADediting_761929 | chr19_45426900_- | SINE | Alu | Name=AluSq2 |
| ADediting_761930 | chr19_45427043_- | SINE | Alu | Name=AluJb |
| ADediting_761931 | chr19_45427353_- | SINE | Alu | Name=AluSg7 |
| ADediting_761932 | chr19_45428144_- | SINE | Alu | Name=AluJb |
| ADediting_761933 | chr19_45428243_- | SINE | Alu | Name=AluJb |
| ADediting_761934 | chr19_45430656_- | SINE | Alu | Name=AluSx1 |
| ADediting_761935 | chr19_45430713_- | SINE | Alu | Name=AluSx1 |
| ADediting_761936 | chr19_45430789_- | SINE | Alu | Name=AluSx1 |
| ADediting_761937 | chr19_45430805_- | SINE | Alu | Name=AluSx1 |
| ADediting_761938 | chr19_45430809_- | SINE | Alu | Name=AluSx1 |
| ADediting_761939 | chr19_45430822_- | SINE | Alu | Name=AluSx1 |
| ADediting_761940 | chr19_45430850_- | SINE | Alu | Name=AluSx1 |
| ADediting_761941 | chr19_45430855_- | SINE | Alu | Name=AluSx1 |
| ADediting_761942 | chr19_45430860_- | SINE | Alu | Name=AluSx1 |
| ADediting_761943 | chr19_45431511_- | SINE | Alu | Name=AluSp |
| ADediting_761944 | chr19_45432040_- | SINE | Alu | Name=AluSc8 |
| ADediting_761945 | chr19_45432068_- | SINE | Alu | Name=AluSc8 |
| ADediting_761946 | chr19_45432069_- | SINE | Alu | Name=AluSc8 |
| ADediting_761947 | chr19_45432741_- | SINE | Alu | Name=AluJr |
| ADediting_761948 | chr19_45432958_- | SINE | Alu | Name=AluSp |
| ADediting_761949 | chr19_45434408_- | SINE | Alu | Name=AluJb |
| ADediting_761950 | chr19_45434478_- | SINE | Alu | Name=AluJb |
| ADediting_761951 | chr19_45434646_- | SINE | Alu | Name=AluSx3 |
| ADediting_761952 | chr19_45434682_- | SINE | Alu | Name=AluSx3 |
| ADediting_761953 | chr19_45434697_- | SINE | Alu | Name=AluSx3 |
| ADediting_761954 | chr19_45434724_- | SINE | Alu | Name=AluSx3 |
| ADediting_761955 | chr19_45435654_- | SINE | Alu | Name=AluJo |
| ADediting_761956 | chr19_45435846_- | SINE | Alu | Name=AluSx |
| ADediting_761957 | chr19_45436382_- | SINE | Alu | Name=AluY |
| ADediting_761958 | chr19_45436462_- | SINE | Alu | Name=AluY |
| ADediting_761959 | chr19_45436857_- | SINE | Alu | Name=FLAM_A |
| ADediting_761960 | chr19_45436993_- | SINE | Alu | Name=AluSx |
| ADediting_761961 | chr19_45437127_- | SINE | Alu | Name=AluSx |
| ADediting_761962 | chr19_45437187_- | SINE | Alu | Name=AluSx |
| ADediting_761963 | chr19_45438585_- | SINE | Alu | Name=AluSx3 |
| ADediting_761964 | chr19_45438714_- | SINE | Alu | Name=AluSp |
| ADediting_761965 | chr19_45438920_- | SINE | Alu | Name=AluSp |
| ADediting_761966 | chr19_45439037_- | SINE | Alu | Name=AluSx |
| ADediting_761967 | chr19_45439038_- | SINE | Alu | Name=AluSx |
| ADediting_761968 | chr19_45439048_- | SINE | Alu | Name=AluSx |
| ADediting_761969 | chr19_45439051_- | SINE | Alu | Name=AluSx |
| ADediting_761970 | chr19_45439062_- | SINE | Alu | Name=AluSx |
| ADediting_761971 | chr19_45439064_- | SINE | Alu | Name=AluSx |
| ADediting_761972 | chr19_45439074_- | SINE | Alu | Name=AluSx |
| ADediting_761973 | chr19_45440872_- | SINE | Alu | Name=AluJr |
| ADediting_761974 | chr19_45440981_- | SINE | Alu | Name=AluJr |
| ADediting_761975 | chr19_45441525_- | SINE | Alu | Name=AluSx1 |
| ADediting_761976 | chr19_45441571_- | SINE | Alu | Name=AluSx1 |
| ADediting_761977 | chr19_45441816_- | SINE | Alu | Name=AluSc8 |
| ADediting_761978 | chr19_45441847_- | SINE | Alu | Name=AluSc8 |
| ADediting_761979 | chr19_45442129_- | SINE | Alu | Name=AluJb |
| ADediting_761980 | chr19_45442216_- | SINE | Alu | Name=AluJb |
| ADediting_761981 | chr19_45442257_- | SINE | Alu | Name=AluJb |
| ADediting_761982 | chr19_45445154_- | SINE | Alu | Name=AluSz |
| ADediting_761983 | chr19_45446017_- | SINE | Alu | Name=AluSq2 |
| ADediting_761984 | chr19_45446127_- | SINE | Alu | Name=AluSq2 |
| ADediting_761985 | chr19_45446132_- | SINE | Alu | Name=AluSq2 |
| ADediting_761986 | chr19_45446743_- | SINE | Alu | Name=AluSg |
| ADediting_761987 | chr19_45446755_- | SINE | Alu | Name=AluSg |
| ADediting_761988 | chr19_45446806_- | SINE | Alu | Name=AluSg |
| ADediting_761989 | chr19_45446815_- | SINE | Alu | Name=AluSg |
| ADediting_761990 | chr19_45446832_- | SINE | Alu | Name=AluSg |
| ADediting_761991 | chr19_45446841_- | SINE | Alu | Name=AluSg |
| ADediting_761992 | chr19_45446850_- | SINE | Alu | Name=AluSg |
| ADediting_761993 | chr19_45446886_- | SINE | Alu | Name=AluSg |
| ADediting_761994 | chr19_45446914_- | SINE | Alu | Name=AluSg |
| ADediting_761995 | chr19_45446915_- | SINE | Alu | Name=AluSg |
| ADediting_761996 | chr19_45446959_- | SINE | Alu | Name=AluSg |
| ADediting_761997 | chr19_45446984_- | SINE | Alu | Name=AluSg |
| ADediting_761999 | chr19_45447343_- | SINE | Alu | Name=AluSq2 |
| ADediting_762000 | chr19_45447414_- | SINE | Alu | Name=AluSq2 |
| ADediting_762001 | chr19_45447493_- | SINE | Alu | Name=AluSq2 |
| ADediting_762002 | chr19_45447494_- | SINE | Alu | Name=AluSq2 |
| ADediting_762003 | chr19_45447547_- | SINE | Alu | Name=AluSq2 |
| ADediting_762004 | chr19_45447548_- | SINE | Alu | Name=AluSq2 |
| ADediting_762007 | chr19_45448036_- | SINE | Alu | Name=AluSx |
| ADediting_762008 | chr19_45448065_- | SINE | Alu | Name=AluSx |
| ADediting_762011 | chr19_45448138_- | SINE | Alu | Name=AluSx |
| ADediting_762012 | chr19_45448144_- | SINE | Alu | Name=AluSx |
| ADediting_762013 | chr19_45448145_- | SINE | Alu | Name=AluSx |
| ADediting_762015 | chr19_45448631_- | SINE | Alu | Name=FLAM_C |
| ADediting_762016 | chr19_45450513_- | SINE | Alu | Name=AluSx |
| ADediting_762017 | chr19_45450525_- | SINE | Alu | Name=AluSx |
| ADediting_762018 | chr19_45450582_- | SINE | Alu | Name=AluSx |
| ADediting_762019 | chr19_45450607_- | SINE | Alu | Name=AluSx |
| ADediting_762020 | chr19_45450613_- | SINE | Alu | Name=AluSx |
| ADediting_762021 | chr19_45450644_- | SINE | Alu | Name=AluSx |
| ADediting_762022 | chr19_45450654_- | SINE | Alu | Name=AluSx |
| ADediting_762023 | chr19_45450703_- | SINE | Alu | Name=AluSx |
| ADediting_762024 | chr19_45450719_- | SINE | Alu | Name=AluSx |
| ADediting_762033 | chr19_45476949_- | SINE | Alu | Name=AluSx1 |
| ADediting_1556699 | chr19_45410876_- | SINE | Alu | Name=AluSz |
| ADediting_1556700 | chr19_45411043_- | SINE | Alu | Name=AluSz |
| ADediting_1556701 | chr19_45412062_- | SINE | Alu | Name=AluY |
| ADediting_1556702 | chr19_45413395_- | SINE | Alu | Name=AluJr |
| ADediting_1556703 | chr19_45414463_- | SINE | Alu | Name=AluSx1 |
| ADediting_1556704 | chr19_45415843_- | SINE | MIR | Name=MIR |
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RNA A-to-I editing events in the alternative splicing sites for ERCC1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_1556703 | chr19_45414463_- | 45414447:45414469 | 3ss | 14i | AGTCTCACTCTCTTGCCCAGGCT | 5.09 | AGTCTCGCTCTCTTGCCCAGGCT | 5.84 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ERCC1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ERCC1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for ERCC1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000013807.9 | ERCC1-201 | hsa-miR-30a-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 145 | -10 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000013807.9 | ERCC1-201 | hsa-miR-30d-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 149 | -10.76 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000013807.9 | ERCC1-201 | hsa-miR-30e-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 145 | -8.82 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000013807.9 | ERCC1-201 | hsa-miR-545-5p | chr19 | 45413457 | 45413464 | 8mer-1a | 45413457 | 45413478 | 143 | -11.04 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592444.5 | ERCC1-216 | hsa-miR-30a-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 145 | -10 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592444.5 | ERCC1-216 | hsa-miR-30d-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 149 | -10.76 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592444.5 | ERCC1-216 | hsa-miR-30e-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 145 | -8.82 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592444.5 | ERCC1-216 | hsa-miR-545-5p | chr19 | 45413457 | 45413464 | 8mer-1a | 45413457 | 45413478 | 143 | -11.04 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_761868 | chr19_45413527_- | ENSG00000012061.15 | ENST00000013807.9 | ERCC1-201 | hsa-miR-212-5p | chr19 | 45413524 | 45413530 | 7mer-m8 | 45413523 | 45413547 | 154 | -19.79 |
| ADediting_761868 | chr19_45413527_- | ENSG00000012061.15 | ENST00000013807.9 | ERCC1-201 | hsa-miR-6878-3p | chr19 | 45413526 | 45413533 | 8mer-1a | 45413526 | 45413546 | 142 | -13.55 |
| ADediting_761868 | chr19_45413527_- | ENSG00000012061.15 | ENST00000592444.5 | ERCC1-216 | hsa-miR-212-5p | chr19 | 45413524 | 45413530 | 7mer-m8 | 45413523 | 45413547 | 154 | -19.79 |
| ADediting_761868 | chr19_45413527_- | ENSG00000012061.15 | ENST00000592444.5 | ERCC1-216 | hsa-miR-6878-3p | chr19 | 45413526 | 45413533 | 8mer-1a | 45413526 | 45413546 | 142 | -13.55 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-30a-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 145 | -10 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-30d-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 149 | -10.76 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-30e-3p | chr19 | 45413454 | 45413461 | 8mer-1a | 45413454 | 45413476 | 145 | -8.82 |
| ADediting_761867 | chr19_45413458_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-545-5p | chr19 | 45413457 | 45413464 | 8mer-1a | 45413457 | 45413478 | 143 | -11.04 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-4793-3p | chr19 | 45414438 | 45414444 | 7mer-m8 | 45414437 | 45414459 | 149 | -19.2 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-4793-3p | chr19 | 45414438 | 45414444 | 7mer-m8 | 45414437 | 45414459 | 149 | -19.2 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1556703 | chr19_45414463_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-4693-3p | chr19 | 45414458 | 45414464 | 7mer-m8 | 45414457 | 45414478 | 155 | -18.76 |
| ADediting_1556703 | chr19_45414463_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-5586-3p | chr19 | 45414459 | 45414465 | 7mer-m8 | 45414458 | 45414479 | 148 | -10.15 |
| ADediting_761868 | chr19_45413527_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-212-5p | chr19 | 45413524 | 45413530 | 7mer-m8 | 45413523 | 45413547 | 154 | -19.79 |
| ADediting_761868 | chr19_45413527_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-6878-3p | chr19 | 45413526 | 45413533 | 8mer-1a | 45413526 | 45413546 | 142 | -13.55 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-1912-5p | chr19 | 45414435 | 45414441 | 7mer-m8 | 45414434 | 45414458 | 155 | -15.86 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-32-5p | chr19 | 45414437 | 45414443 | 7mer-m8 | 45414436 | 45414457 | 144 | -12.53 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-363-3p | chr19 | 45414437 | 45414443 | 7mer-m8 | 45414436 | 45414457 | 147 | -16.12 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-616-3p | chr19 | 45414433 | 45414440 | 8mer-1a | 45414433 | 45414457 | 147 | -17.17 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000588738.5 | ERCC1-207 | hsa-miR-92a-3p | chr19 | 45414437 | 45414443 | 7mer-m8 | 45414436 | 45414453 | 155 | -26.92 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-1912-5p | chr19 | 45414435 | 45414441 | 7mer-m8 | 45414434 | 45414458 | 155 | -15.86 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-32-5p | chr19 | 45414437 | 45414443 | 7mer-m8 | 45414436 | 45414457 | 144 | -12.53 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-363-3p | chr19 | 45414437 | 45414443 | 7mer-m8 | 45414436 | 45414457 | 147 | -16.12 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-616-3p | chr19 | 45414433 | 45414440 | 8mer-1a | 45414433 | 45414457 | 147 | -17.17 |
| ADediting_761869 | chr19_45414438_- | ENSG00000012061.15 | ENST00000592410.5 | ERCC1-215 | hsa-miR-92a-3p | chr19 | 45414437 | 45414443 | 7mer-m8 | 45414436 | 45414453 | 155 | -26.92 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000012061.15 | ENST00000300853.7 | ERCC1-202 | hsa-miR-589-3p | chr19 | 45408035 | 45408041 | 7mer-m8 | 45408034 | 45408057 | 145 | -17.35 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000012061.15 | ENST00000423698.6 | ERCC1-204 | hsa-miR-589-3p | chr19 | 45408035 | 45408041 | 7mer-m8 | 45408034 | 45408057 | 145 | -17.35 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000012061.15 | ENST00000300853.7 | ERCC1-202 | hsa-miR-641 | chr19 | 45407586 | 45407593 | 8mer-1a | 45407586 | 45407610 | 149 | -16.76 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000012061.15 | ENST00000423698.6 | ERCC1-204 | hsa-miR-641 | chr19 | 45407586 | 45407593 | 8mer-1a | 45407586 | 45407610 | 149 | -16.76 |
| ADediting_496066 | chr15_66496985_- | ENSG00000012061.15 | ENST00000300853.7 | ERCC1-202 | hsa-miR-4512 | chr19 | 45409179 | 45409186 | 8mer-1a | 45409179 | 45409204 | 150 | -21.05 |
| ADediting_496066 | chr15_66496985_- | ENSG00000012061.15 | ENST00000423698.6 | ERCC1-204 | hsa-miR-4512 | chr19 | 45409179 | 45409186 | 8mer-1a | 45409179 | 45409204 | 150 | -21.05 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000012061.15 | ENST00000300853.7 | ERCC1-202 | hsa-miR-5585-3p | chr19 | 45408540 | 45408546 | 7mer-m8 | 45408539 | 45408562 | 146 | -18.16 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000012061.15 | ENST00000423698.6 | ERCC1-204 | hsa-miR-5585-3p | chr19 | 45408540 | 45408546 | 7mer-m8 | 45408539 | 45408562 | 146 | -18.16 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_496066 | chr15_66496985_- | ENSG00000012061.15 | ENST00000300853.7 | ERCC1-202 | hsa-miR-4512 | chr19 | 45408445 | 45408451 | 7mer-m8 | 45408444 | 45408465 | 140 | -21.53 |
| ADediting_496066 | chr15_66496985_- | ENSG00000012061.15 | ENST00000300853.7 | ERCC1-202 | hsa-miR-4512 | chr19 | 45408649 | 45408655 | 7mer-m8 | 45408648 | 45408669 | 140 | -18.52 |
| ADediting_496066 | chr15_66496985_- | ENSG00000012061.15 | ENST00000423698.6 | ERCC1-204 | hsa-miR-4512 | chr19 | 45408445 | 45408451 | 7mer-m8 | 45408444 | 45408465 | 140 | -21.53 |
| ADediting_496066 | chr15_66496985_- | ENSG00000012061.15 | ENST00000423698.6 | ERCC1-204 | hsa-miR-4512 | chr19 | 45408649 | 45408655 | 7mer-m8 | 45408648 | 45408669 | 140 | -18.52 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for ERCC1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000588738.5 | lncRNA |  |  |
| ENST00000592410.5 | lncRNA |  |  |
| ENST00000013807.9 | protein_coding |  |  |
| ENST00000592444.5 | protein_coding |  |  |
| ENST00000592083.5 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_761866 | ENST00000013807.9 | chr19_45413457_- | 1255 | -490.80 | -489.40 | -491.20 |
| ADediting_761867 | ENST00000013807.9 | chr19_45413458_- | 1254 | -490.00 | -489.40 | -491.20 |
| ADediting_761868 | ENST00000013807.9 | chr19_45413527_- | 1185 | -489.80 | -489.40 | -491.20 |
| ADediting_761866 | ENST00000592444.5 | chr19_45413457_- | 428 | -146.60 | -145.10 | -145.80 |
| ADediting_761867 | ENST00000592444.5 | chr19_45413458_- | 427 | -145.50 | -145.10 | -145.80 |
| ADediting_761868 | ENST00000592444.5 | chr19_45413527_- | 358 | -145.10 | -145.10 | -145.80 |
| ADediting_762021 | ENST00000592083.5 | chr19_45450644_- | 82 | -358.10 | -356.90 | -361.70 |
| ADediting_762022 | ENST00000592083.5 | chr19_45450654_- | 72 | -356.90 | -356.90 | -361.70 |
| ADediting_762023 | ENST00000592083.5 | chr19_45450703_- | 23 | -358.10 | -356.90 | -361.70 |
| ADediting_762024 | ENST00000592083.5 | chr19_45450719_- | 7 | -361.90 | -356.90 | -361.70 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_761869 | ENST00000588738.5 | chr19_45414438_- | 179 | -197.20 | -193.30 | -198.70 |
| ADediting_1556703 | ENST00000588738.5 | chr19_45414463_- | 154 | -195.40 | -193.30 | -198.70 |
| ADediting_761866 | ENST00000592410.5 | chr19_45413457_- | 487 | -185.90 | -184.80 | -190.60 |
| ADediting_761867 | ENST00000592410.5 | chr19_45413458_- | 486 | -184.80 | -184.80 | -190.60 |
| ADediting_761868 | ENST00000592410.5 | chr19_45413527_- | 417 | -185.30 | -184.80 | -190.60 |
| ADediting_761869 | ENST00000592410.5 | chr19_45414438_- | 40 | -189.80 | -184.80 | -190.60 |
| ADediting_1556703 | ENST00000592410.5 | chr19_45414463_- | 15 | -184.40 | -184.80 | -190.60 |
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Relation with ADAR for ERCC1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_761795 | chr19_45410892_- | 1.46694389916757e-07 | 0.293157526621966 | 8.10114874475858e-10 | 0.339830151958739 | 0.000505570931074548 | 0.196391403928209 |
| TCX | ADediting_761795 | chr19_45410892_- | 0.000466002435000073 | 0.28226726406124 | 4.12951088250099e-08 | 0.429551094944271 | 0.30162421601008 | -0.0848983865879325 |
| DLPFC | ADediting_761805 | chr19_45411091_- | 3.11369566804033e-05 | 0.234203316356298 | 1.44378394415825e-08 | 0.314968991394552 | 0.0117020718839422 | 0.143024301370654 |
| TCX | ADediting_761805 | chr19_45411091_- | 0.0301132059696358 | 0.177144392409957 | 2.08456329566865e-07 | 0.408656874157526 | 0.00139041689688572 | -0.258709964060913 |
| TCX | ADediting_761807 | chr19_45411537_- | 0.00108977841623837 | 0.264145808924668 | 9.99760496686822e-09 | 0.446763266016978 | 0.057806164134249 | -0.155261008086931 |
| TCX | ADediting_761809 | chr19_45411564_- | 6.69868769475401e-05 | 0.319609858552848 | 2.83075134536453e-06 | 0.371665866977306 | 0.96443464913913 | -0.00367140424872815 |
| TCX | ADediting_761810 | chr19_45411568_- | 3.89920114883697e-05 | 0.329199158152329 | 4.52722537392791e-10 | 0.481302056895479 | 0.314536430913637 | -0.0826699524837818 |
| DLPFC | ADediting_761815 | chr19_45411646_- | 1.42259931656679e-05 | 0.24377091470863 | 2.39238696044744e-09 | 0.330744218031336 | 0.00158684080178163 | 0.178656636770352 |
| DLPFC | ADediting_761816 | chr19_45411650_- | 2.30793818613626e-05 | 0.237907675786277 | 2.24230769467418e-08 | 0.310962131993077 | 0.0299528104420725 | 0.123315500921757 |
| TCX | ADediting_761831 | chr19_45411995_- | 6.96805928854829e-06 | 0.357759507145448 | 2.81060939818884e-07 | 0.404639962448389 | 0.0131859786525703 | -0.2019847197852 |
| TCX | ADediting_761832 | chr19_45412001_- | 7.74218699761777e-05 | 0.316988774099498 | 2.3270421164124e-05 | 0.338057376787462 | 0.016977205702462 | -0.194674087296293 |
| TCX | ADediting_761835 | chr19_45412126_- | 0.000161313335178453 | 0.303309969217142 | 2.22394374913523e-10 | 0.488720463986702 | 0.332024083164661 | -0.0797447192689486 |
| TCX | ADediting_761836 | chr19_45412131_- | 0.000433973149145729 | 0.283731749221701 | 1.35069314444641e-09 | 0.469536583276569 | 0.0307345751457492 | -0.176492708090575 |
| TCX | ADediting_761837 | chr19_45412132_- | 3.49345220779072e-05 | 0.331107757091397 | 1.42366485932214e-05 | 0.346246037844445 | 0.804375714376732 | -0.0203921378927354 |
| TCX | ADediting_761839 | chr19_45412219_- | 0.000830886132339426 | 0.270067415632698 | 1.52618592690138e-07 | 0.41279249054223 | 0.22841806086765 | -0.0989285751672348 |
| TCX | ADediting_761851 | chr19_45412426_- | 8.64815478854184e-05 | 0.314968787404598 | 6.31441592330785e-10 | 0.477767730374469 | 0.00133113215164381 | -0.259690581581789 |
| CER | ADediting_761858 | chr19_45412968_- | 0.0179763791231834 | 0.192986275915495 | 0.00112206854683209 | 0.263500271873697 | 1.97311436752901e-05 | 0.340832589205598 |
| DLPFC | ADediting_761905 | chr19_45418784_- | 0.113666151241682 | 0.0900285929632255 | 0.816684469306451 | -0.0132188308065353 | 7.7611619622442e-10 | 0.340183881207752 |
| DLPFC | ADediting_761913 | chr19_45421912_- | 0.899102244796337 | 0.00723061720558304 | 0.077531274853826 | -0.100408363960752 | 3.46498090670562e-19 | 0.479009511457361 |
| DLPFC | ADediting_761921 | chr19_45422674_- | 0.941197836692378 | -0.00420651243606183 | 0.125733470881068 | -0.0871497418626652 | 2.43487640375581e-09 | 0.33059402862357 |
| DLPFC | ADediting_761922 | chr19_45422675_- | 0.973913488623654 | 0.0018647907726549 | 0.0946671719331512 | -0.095091038609234 | 3.692400451953e-11 | 0.364243943520867 |
| DLPFC | ADediting_761923 | chr19_45424994_- | 0.993308346035778 | -0.000478272744940176 | 0.0665551386863208 | -0.10433896718185 | 5.31595160128816e-15 | 0.424623747717198 |
| DLPFC | ADediting_761926 | chr19_45425596_- | 0.512608963874072 | 0.0373268733466998 | 0.254856051653934 | -0.0648639476063125 | 2.64083480128004e-13 | 0.399465896724147 |
| DLPFC | ADediting_761927 | chr19_45425993_- | 0.486747203473795 | 0.0396459015239435 | 0.105848393063769 | -0.092024063027544 | 1.12548020637664e-22 | 0.517926718353484 |
| DLPFC | ADediting_761966 | chr19_45439037_- | 0.0555319295933472 | 0.108863514391277 | 0.910731860738274 | -0.00639349323655513 | 7.46949407438909e-22 | 0.509194892052856 |
| DLPFC | ADediting_761970 | chr19_45439062_- | 0.0668866564200431 | 0.104212752607021 | 0.950099525170843 | 0.0035688130369224 | 5.80834977380082e-14 | 0.409473008678689 |
| DLPFC | ADediting_761971 | chr19_45439064_- | 0.0317652078830567 | 0.121998370363999 | 0.729569495172367 | 0.0197120655672032 | 1.12611278362394e-15 | 0.434064809304303 |
| DLPFC | ADediting_761972 | chr19_45439074_- | 0.0584332513797695 | 0.107605421925497 | 0.917607871920604 | 0.00589919932737898 | 3.18511084326523e-16 | 0.441536003167077 |
| DLPFC | ADediting_761987 | chr19_45446755_- | 0.0663857745317872 | 0.104403646022764 | 0.795256519342275 | 0.0147970611058687 | 1.13008232428243e-11 | 0.373079237277909 |
| DLPFC | ADediting_762000 | chr19_45447414_- | 0.562979907977686 | -0.0329763864855846 | 0.0751259712057896 | -0.101228998563332 | 4.82772191640029e-08 | 0.303836422530734 |
| DLPFC | ADediting_762002 | chr19_45447494_- | 0.588726939981609 | -0.0308258916256445 | 0.0275509353404413 | -0.125170358684293 | 6.20727907723429e-12 | 0.377450062766961 |
| DLPFC | ADediting_762018 | chr19_45450582_- | 0.252655425464315 | 0.0651646527340703 | 0.527754046232443 | -0.0359970740217315 | 1.05142775880369e-14 | 0.420379561369211 |
| DLPFC | ADediting_762022 | chr19_45450654_- | 0.404908972839704 | 0.0474698445469546 | 0.956090411402763 | 0.00313989251641346 | 2.61946914115751e-08 | 0.309532788613911 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.72098817923438e-51 | 0.722467922033466 | 7.95853084014352e-59 | 0.756808786391092 | 2.49145003803759e-15 | 0.429270847413725 |
| AC | 9.98820354072834e-87 | 0.890365289677785 | 6.82226309663553e-55 | 0.791232735463104 | 2.96278462825372e-15 | 0.471697356371085 |
| PCC | 9.12039558435822e-41 | 0.782622693848549 | 3.37432472319382e-39 | 0.772953654301127 | 0.0100808966602986 | 0.185774715807766 |
| CER | 6.60637141864531e-17 | 0.613931348237615 | 2.67290336684063e-08 | 0.434932091106694 | 0.345415003592199 | 0.0775708434263962 |
| TCX | 5.61007299100314e-34 | 0.795255379446435 | 5.13081561263096e-15 | 0.582763706870181 | 0.00152804397071617 | 0.25657300077664 |
| FP | 2.8449902517944e-40 | 0.796291392322883 | 4.31049608828296e-33 | 0.747501816012021 | 0.000323747710457574 | 0.266483060744322 |
| IFG | 4.11670747765557e-08 | 0.858231366519012 | 2.86701814082307e-06 | 0.788348881985517 | 0.207657448785759 | 0.260972857289755 |
| PG | 0.00167090982493166 | 0.228947580242713 | 2.2429610946005e-06 | 0.338805937026607 | 0.561543254701589 | 0.042837280454676 |
| STG | 3.40964557727287e-27 | 0.87222286108915 | 3.55497660062047e-12 | 0.668884198912466 | 0.157492437425311 | 0.15562196266026 |
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Relation with AD stages for ERCC1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_761858 | chr19_45412968_- | 0.00136470271053416 | 0.304313075575624 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
Top |
RelatedDrugs for ERCC1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ERCC1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| ERCC1 | C0007131 | Non-Small Cell Lung Carcinoma | 2 | CTD_human |
| ERCC1 | C1853100 | CEREBROOCULOFACIOSKELETAL SYNDROME 4 | 2 | CTD_human;UNIPROT |
| ERCC1 | C0001956 | Alcohol Use Disorder | 1 | PSYGENET |
| ERCC1 | C0004403 | Autosome Abnormalities | 1 | CTD_human |
| ERCC1 | C0006826 | Malignant Neoplasms | 1 | CTD_human |
| ERCC1 | C0007873 | Uterine Cervical Neoplasm | 1 | CTD_human |
| ERCC1 | C0008625 | Chromosome Aberrations | 1 | CTD_human |
| ERCC1 | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
| ERCC1 | C0025202 | melanoma | 1 | CTD_human |
| ERCC1 | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
| ERCC1 | C0027651 | Neoplasms | 1 | CTD_human |
| ERCC1 | C0027654 | Embryonal Neoplasm | 1 | CTD_human |
| ERCC1 | C0027658 | Neoplasms, Germ Cell and Embryonal | 1 | CTD_human |
| ERCC1 | C0031117 | Peripheral Neuropathy | 1 | CTD_human |
| ERCC1 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
| ERCC1 | C0039590 | Testicular Neoplasms | 1 | CTD_human |
| ERCC1 | C0086692 | Benign Neoplasm | 1 | CTD_human |
| ERCC1 | C0152013 | Adenocarcinoma of lung (disorder) | 1 | CTD_human |
| ERCC1 | C0153594 | Malignant neoplasm of testis | 1 | CTD_human |
| ERCC1 | C0205851 | Germ cell tumor | 1 | CTD_human |
| ERCC1 | C0205852 | Neoplasms, Embryonal and Mixed | 1 | CTD_human |
| ERCC1 | C0274861 | Arsenic Poisoning, Inorganic | 1 | CTD_human |
| ERCC1 | C0274862 | Nervous System, Organic Arsenic Poisoning | 1 | CTD_human |
| ERCC1 | C0311375 | Arsenic Poisoning | 1 | CTD_human |
| ERCC1 | C0740345 | Germ Cell Cancer | 1 | CTD_human |
| ERCC1 | C0751364 | Cancer, Embryonal | 1 | CTD_human |
| ERCC1 | C0751365 | Cancer, Embryonal and Mixed | 1 | CTD_human |
| ERCC1 | C0751851 | Arsenic Encephalopathy | 1 | CTD_human |
| ERCC1 | C0751852 | Arsenic Induced Polyneuropathy | 1 | CTD_human |
| ERCC1 | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |
| ERCC1 | C1720811 | Tumor of Rete Testis | 1 | CTD_human |
| ERCC1 | C2931822 | Nasopharyngeal carcinoma | 1 | CTD_human |
| ERCC1 | C3714756 | Intellectual Disability | 1 | GENOMICS_ENGLAND |
| ERCC1 | C4048328 | cervical cancer | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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