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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SNAI3-AS1 |
 Gene summary |
| Gene information | Gene symbol | SNAI3-AS1 | Gene ID | 197187 |
| Gene name | SNAI3 antisense RNA 1 | |
| Synonyms | - | |
| Cytomap | 16q24.2 | |
| Type of gene | ncRNA | |
| Description | - | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for SNAI3-AS1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_581392(88664325, +), ADediting_581393(88664326, +), ADediting_581394(88664334, +), ADediting_581395(88664392, +), ADediting_581396(88664393, +), ADediting_581397(88664403, +), ADediting_581398(88664432, +), ADediting_581399(88664457, +), ADediting_581400(88664458, +), ADediting_581401(88664463, +), ADediting_581402(88664467, +), ADediting_581403(88664484, +), ADediting_581404(88664513, +), ADediting_581405(88664773, +), ADediting_581406(88664776, +), ADediting_581407(88664791, +), ADediting_581408(88664798, +), ADediting_581409(88664810, +), ADediting_581410(88664811, +), ADediting_581411(88664823, +), ADediting_581412(88664828, +), ADediting_581413(88664840, +), ADediting_581414(88664850, +), ADediting_581415(88664856, +), ADediting_581416(88664899, +), ADediting_581417(88664972, +), ADediting_581418(88664982, +), ADediting_581419(88664985, +), ADediting_581420(88664994, +), ADediting_581421(88665718, +), ADediting_581422(88665792, +), ADediting_581423(88665805, +), ADediting_581424(88665872, +), ADediting_581425(88665887, +), ADediting_581426(88666045, +), ADediting_581427(88666357, +), ADediting_581428(88666427, +), ADediting_581429(88666472, +), ADediting_581430(88666481, +), ADediting_581431(88666482, +), ADediting_581432(88666916, +), ADediting_581433(88667034, +), ADediting_581434(88667113, +), ADediting_581435(88667119, +), ADediting_581436(88667120, +), ADediting_581437(88667137, +), ADediting_581438(88667149, +), ADediting_581439(88667205, +), ADediting_581440(88667269, +), ADediting_581441(88667288, +), ADediting_581442(88667300, +), ADediting_581443(88667349, +), ADediting_581444(88667359, +), ADediting_581445(88667385, +), ADediting_581446(88667388, +), ADediting_581447(88667397, +), ADediting_581448(88667399, +), ADediting_581449(88667421, +), ADediting_581450(88668625, +), ADediting_581451(88668626, +), ADediting_581452(88668629, +), ADediting_581453(88668656, +), ADediting_581454(88668720, +), ADediting_581455(88668754, +), ADediting_581456(88668769, +), ADediting_581457(88668773, +), ADediting_581458(88668796, +), ADediting_581459(88669049, +), ADediting_581460(88669102, +), ADediting_581461(88669103, +), ADediting_581462(88669185, +), ADediting_581463(88669195, +), ADediting_581464(88669227, +), ADediting_581465(88669249, +), ADediting_581466(88669250, +), ADediting_581467(88669417, +), ADediting_581468(88669418, +), ADediting_581469(88669459, +), ADediting_581470(88669487, +), ADediting_581471(88669579, +), ADediting_581472(88669594, +), ADediting_581473(88670558, +), ADediting_581474(88670711, +), ADediting_581475(88670716, +), ADediting_581476(88670831, +), ADediting_581477(88670834, +), ADediting_581478(88670853, +), ADediting_581479(88670976, +), ADediting_581480(88671055, +), ADediting_581481(88674339, +), ADediting_581482(88675599, +), ADediting_581483(88675610, +), ADediting_581484(88675612, +), ADediting_581485(88675613, +), ADediting_581486(88675616, +), ADediting_581487(88675617, +), ADediting_581488(88675642, +), ADediting_581489(88675647, +), ADediting_581490(88675652, +), ADediting_581491(88675654, +), ADediting_581492(88675670, +), ADediting_581493(88675689, +), ADediting_581494(88675695, +), ADediting_581495(88675698, +), ADediting_581496(88675704, +), ADediting_581497(88675715, +), ADediting_581498(88675724, +), ADediting_581499(88675735, +), ADediting_581500(88675736, +), ADediting_581501(88675737, +), ADediting_1544916(88664755, +), ADediting_1544917(88666844, +), ADediting_1544918(88667398, +), ADediting_1544919(88668550, +), ADediting_1544920(88671118, +), ADediting_1544921(88675557, +), ADediting_1544922(88675706, +), ADediting_1625836(88670698, +), |
Top |
RNA editing positional annotations for SNAI3-AS1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_581392 | chr16_88664325_+ | ncRNA_intronic |
| ADediting_581393 | chr16_88664326_+ | ncRNA_intronic |
| ADediting_581394 | chr16_88664334_+ | ncRNA_intronic |
| ADediting_581395 | chr16_88664392_+ | ncRNA_intronic |
| ADediting_581396 | chr16_88664393_+ | ncRNA_intronic |
| ADediting_581397 | chr16_88664403_+ | ncRNA_intronic |
| ADediting_581398 | chr16_88664432_+ | ncRNA_intronic |
| ADediting_581399 | chr16_88664457_+ | ncRNA_intronic |
| ADediting_581400 | chr16_88664458_+ | ncRNA_intronic |
| ADediting_581401 | chr16_88664463_+ | ncRNA_intronic |
| ADediting_581402 | chr16_88664467_+ | ncRNA_intronic |
| ADediting_581403 | chr16_88664484_+ | ncRNA_intronic |
| ADediting_581404 | chr16_88664513_+ | ncRNA_intronic |
| ADediting_581405 | chr16_88664773_+ | ncRNA_intronic |
| ADediting_581406 | chr16_88664776_+ | ncRNA_intronic |
| ADediting_581407 | chr16_88664791_+ | ncRNA_intronic |
| ADediting_581408 | chr16_88664798_+ | ncRNA_intronic |
| ADediting_581409 | chr16_88664810_+ | ncRNA_intronic |
| ADediting_581410 | chr16_88664811_+ | ncRNA_intronic |
| ADediting_581411 | chr16_88664823_+ | ncRNA_intronic |
| ADediting_581412 | chr16_88664828_+ | ncRNA_intronic |
| ADediting_581413 | chr16_88664840_+ | ncRNA_intronic |
| ADediting_581414 | chr16_88664850_+ | ncRNA_intronic |
| ADediting_581415 | chr16_88664856_+ | ncRNA_intronic |
| ADediting_581416 | chr16_88664899_+ | ncRNA_intronic |
| ADediting_581417 | chr16_88664972_+ | ncRNA_intronic |
| ADediting_581418 | chr16_88664982_+ | ncRNA_intronic |
| ADediting_581419 | chr16_88664985_+ | ncRNA_intronic |
| ADediting_581420 | chr16_88664994_+ | ncRNA_intronic |
| ADediting_581421 | chr16_88665718_+ | ncRNA_intronic |
| ADediting_581422 | chr16_88665792_+ | ncRNA_intronic |
| ADediting_581423 | chr16_88665805_+ | ncRNA_intronic |
| ADediting_581424 | chr16_88665872_+ | ncRNA_intronic |
| ADediting_581425 | chr16_88665887_+ | ncRNA_intronic |
| ADediting_581426 | chr16_88666045_+ | ncRNA_intronic |
| ADediting_581427 | chr16_88666357_+ | ncRNA_intronic |
| ADediting_581428 | chr16_88666427_+ | ncRNA_intronic |
| ADediting_581429 | chr16_88666472_+ | ncRNA_intronic |
| ADediting_581430 | chr16_88666481_+ | ncRNA_intronic |
| ADediting_581431 | chr16_88666482_+ | ncRNA_intronic |
| ADediting_581432 | chr16_88666916_+ | ncRNA_intronic |
| ADediting_581433 | chr16_88667034_+ | ncRNA_intronic |
| ADediting_581434 | chr16_88667113_+ | ncRNA_intronic |
| ADediting_581435 | chr16_88667119_+ | ncRNA_intronic |
| ADediting_581436 | chr16_88667120_+ | ncRNA_intronic |
| ADediting_581437 | chr16_88667137_+ | ncRNA_intronic |
| ADediting_581438 | chr16_88667149_+ | ncRNA_intronic |
| ADediting_581439 | chr16_88667205_+ | ncRNA_intronic |
| ADediting_581440 | chr16_88667269_+ | ncRNA_intronic |
| ADediting_581441 | chr16_88667288_+ | ncRNA_intronic |
| ADediting_581442 | chr16_88667300_+ | ncRNA_intronic |
| ADediting_581443 | chr16_88667349_+ | ncRNA_intronic |
| ADediting_581444 | chr16_88667359_+ | ncRNA_intronic |
| ADediting_581445 | chr16_88667385_+ | ncRNA_intronic |
| ADediting_581446 | chr16_88667388_+ | ncRNA_intronic |
| ADediting_581447 | chr16_88667397_+ | ncRNA_intronic |
| ADediting_581448 | chr16_88667399_+ | ncRNA_intronic |
| ADediting_581449 | chr16_88667421_+ | ncRNA_intronic |
| ADediting_581450 | chr16_88668625_+ | ncRNA_intronic |
| ADediting_581451 | chr16_88668626_+ | ncRNA_intronic |
| ADediting_581452 | chr16_88668629_+ | ncRNA_intronic |
| ADediting_581453 | chr16_88668656_+ | ncRNA_intronic |
| ADediting_581454 | chr16_88668720_+ | ncRNA_intronic |
| ADediting_581455 | chr16_88668754_+ | ncRNA_intronic |
| ADediting_581456 | chr16_88668769_+ | ncRNA_intronic |
| ADediting_581457 | chr16_88668773_+ | ncRNA_intronic |
| ADediting_581458 | chr16_88668796_+ | ncRNA_intronic |
| ADediting_581459 | chr16_88669049_+ | ncRNA_intronic |
| ADediting_581460 | chr16_88669102_+ | ncRNA_intronic |
| ADediting_581461 | chr16_88669103_+ | ncRNA_intronic |
| ADediting_581462 | chr16_88669185_+ | ncRNA_intronic |
| ADediting_581463 | chr16_88669195_+ | ncRNA_intronic |
| ADediting_581464 | chr16_88669227_+ | ncRNA_intronic |
| ADediting_581465 | chr16_88669249_+ | ncRNA_intronic |
| ADediting_581466 | chr16_88669250_+ | ncRNA_intronic |
| ADediting_581467 | chr16_88669417_+ | ncRNA_intronic |
| ADediting_581468 | chr16_88669418_+ | ncRNA_intronic |
| ADediting_581469 | chr16_88669459_+ | ncRNA_intronic |
| ADediting_581470 | chr16_88669487_+ | ncRNA_intronic |
| ADediting_581471 | chr16_88669579_+ | ncRNA_intronic |
| ADediting_581472 | chr16_88669594_+ | ncRNA_intronic |
| ADediting_581473 | chr16_88670558_+ | ncRNA_intronic |
| ADediting_581474 | chr16_88670711_+ | ncRNA_intronic |
| ADediting_581475 | chr16_88670716_+ | ncRNA_intronic |
| ADediting_581476 | chr16_88670831_+ | ncRNA_intronic |
| ADediting_581477 | chr16_88670834_+ | ncRNA_intronic |
| ADediting_581478 | chr16_88670853_+ | ncRNA_intronic |
| ADediting_581479 | chr16_88670976_+ | ncRNA_intronic |
| ADediting_581480 | chr16_88671055_+ | ncRNA_intronic |
| ADediting_581481 | chr16_88674339_+ | ncRNA_exonic |
| ADediting_581482 | chr16_88675599_+ | ncRNA_exonic |
| ADediting_581483 | chr16_88675610_+ | ncRNA_exonic |
| ADediting_581484 | chr16_88675612_+ | ncRNA_exonic |
| ADediting_581485 | chr16_88675613_+ | ncRNA_exonic |
| ADediting_581486 | chr16_88675616_+ | ncRNA_exonic |
| ADediting_581487 | chr16_88675617_+ | ncRNA_exonic |
| ADediting_581488 | chr16_88675642_+ | ncRNA_exonic |
| ADediting_581489 | chr16_88675647_+ | ncRNA_exonic |
| ADediting_581490 | chr16_88675652_+ | ncRNA_exonic |
| ADediting_581491 | chr16_88675654_+ | ncRNA_exonic |
| ADediting_581492 | chr16_88675670_+ | ncRNA_exonic |
| ADediting_581493 | chr16_88675689_+ | ncRNA_exonic |
| ADediting_581494 | chr16_88675695_+ | ncRNA_exonic |
| ADediting_581495 | chr16_88675698_+ | ncRNA_exonic |
| ADediting_581496 | chr16_88675704_+ | ncRNA_exonic |
| ADediting_581497 | chr16_88675715_+ | ncRNA_exonic |
| ADediting_581498 | chr16_88675724_+ | ncRNA_exonic |
| ADediting_581499 | chr16_88675735_+ | ncRNA_exonic |
| ADediting_581500 | chr16_88675736_+ | ncRNA_exonic |
| ADediting_581501 | chr16_88675737_+ | ncRNA_exonic |
| ADediting_1544916 | chr16_88664755_+ | ncRNA_intronic |
| ADediting_1544917 | chr16_88666844_+ | ncRNA_intronic |
| ADediting_1544918 | chr16_88667398_+ | ncRNA_intronic |
| ADediting_1544919 | chr16_88668550_+ | ncRNA_intronic |
| ADediting_1544920 | chr16_88671118_+ | ncRNA_intronic |
| ADediting_1544921 | chr16_88675557_+ | ncRNA_exonic |
| ADediting_1544922 | chr16_88675706_+ | ncRNA_exonic |
| ADediting_1625836 | chr16_88670698_+ | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_581392 | chr16_88664325_+ | SINE | Alu | Name=AluSg |
| ADediting_581393 | chr16_88664326_+ | SINE | Alu | Name=AluSg |
| ADediting_581394 | chr16_88664334_+ | SINE | Alu | Name=AluSg |
| ADediting_581395 | chr16_88664392_+ | SINE | Alu | Name=AluSg |
| ADediting_581396 | chr16_88664393_+ | SINE | Alu | Name=AluSg |
| ADediting_581397 | chr16_88664403_+ | SINE | Alu | Name=AluSg |
| ADediting_581398 | chr16_88664432_+ | SINE | Alu | Name=AluSg |
| ADediting_581399 | chr16_88664457_+ | SINE | Alu | Name=AluSg |
| ADediting_581400 | chr16_88664458_+ | SINE | Alu | Name=AluSg |
| ADediting_581401 | chr16_88664463_+ | SINE | Alu | Name=AluSg |
| ADediting_581402 | chr16_88664467_+ | SINE | Alu | Name=AluSg |
| ADediting_581403 | chr16_88664484_+ | SINE | Alu | Name=AluSg |
| ADediting_581404 | chr16_88664513_+ | SINE | Alu | Name=AluSg |
| ADediting_581405 | chr16_88664773_+ | SINE | Alu | Name=AluJr |
| ADediting_581406 | chr16_88664776_+ | SINE | Alu | Name=AluJr |
| ADediting_581407 | chr16_88664791_+ | SINE | Alu | Name=AluJr |
| ADediting_581408 | chr16_88664798_+ | SINE | Alu | Name=AluJr |
| ADediting_581409 | chr16_88664810_+ | SINE | Alu | Name=AluJr |
| ADediting_581410 | chr16_88664811_+ | SINE | Alu | Name=AluJr |
| ADediting_581411 | chr16_88664823_+ | SINE | Alu | Name=AluJr |
| ADediting_581412 | chr16_88664828_+ | SINE | Alu | Name=AluJr |
| ADediting_581413 | chr16_88664840_+ | SINE | Alu | Name=AluJr |
| ADediting_581414 | chr16_88664850_+ | SINE | Alu | Name=AluJr |
| ADediting_581415 | chr16_88664856_+ | SINE | Alu | Name=AluJr |
| ADediting_581416 | chr16_88664899_+ | SINE | Alu | Name=AluJr |
| ADediting_581417 | chr16_88664972_+ | SINE | Alu | Name=AluJr |
| ADediting_581418 | chr16_88664982_+ | SINE | Alu | Name=AluJr |
| ADediting_581419 | chr16_88664985_+ | SINE | Alu | Name=AluJr |
| ADediting_581420 | chr16_88664994_+ | SINE | Alu | Name=AluJr |
| ADediting_581421 | chr16_88665718_+ | SINE | Alu | Name=AluJr |
| ADediting_581422 | chr16_88665792_+ | SINE | Alu | Name=AluJr |
| ADediting_581423 | chr16_88665805_+ | SINE | Alu | Name=AluJr |
| ADediting_581424 | chr16_88665872_+ | SINE | Alu | Name=AluJr |
| ADediting_581425 | chr16_88665887_+ | SINE | Alu | Name=AluJr |
| ADediting_581426 | chr16_88666045_+ | SINE | Alu | Name=AluSz6 |
| ADediting_581427 | chr16_88666357_+ | SINE | Alu | Name=AluY |
| ADediting_581428 | chr16_88666427_+ | SINE | Alu | Name=AluY |
| ADediting_581429 | chr16_88666472_+ | SINE | Alu | Name=AluY |
| ADediting_581430 | chr16_88666481_+ | SINE | Alu | Name=AluY |
| ADediting_581431 | chr16_88666482_+ | SINE | Alu | Name=AluY |
| ADediting_581432 | chr16_88666916_+ | SINE | Alu | Name=AluJb |
| ADediting_581433 | chr16_88667034_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581434 | chr16_88667113_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581435 | chr16_88667119_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581436 | chr16_88667120_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581437 | chr16_88667137_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581438 | chr16_88667149_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581439 | chr16_88667205_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581440 | chr16_88667269_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581441 | chr16_88667288_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581442 | chr16_88667300_+ | SINE | Alu | Name=AluSc8 |
| ADediting_581443 | chr16_88667349_+ | SINE | Alu | Name=AluJb |
| ADediting_581444 | chr16_88667359_+ | SINE | Alu | Name=AluJb |
| ADediting_581445 | chr16_88667385_+ | SINE | Alu | Name=AluJb |
| ADediting_581446 | chr16_88667388_+ | SINE | Alu | Name=AluJb |
| ADediting_581447 | chr16_88667397_+ | SINE | Alu | Name=AluJb |
| ADediting_581448 | chr16_88667399_+ | SINE | Alu | Name=AluJb |
| ADediting_581449 | chr16_88667421_+ | SINE | Alu | Name=AluJb |
| ADediting_581450 | chr16_88668625_+ | SINE | Alu | Name=AluJb |
| ADediting_581451 | chr16_88668626_+ | SINE | Alu | Name=AluJb |
| ADediting_581452 | chr16_88668629_+ | SINE | Alu | Name=AluJb |
| ADediting_581453 | chr16_88668656_+ | SINE | Alu | Name=AluJb |
| ADediting_581454 | chr16_88668720_+ | SINE | Alu | Name=AluJb |
| ADediting_581455 | chr16_88668754_+ | SINE | Alu | Name=AluJb |
| ADediting_581456 | chr16_88668769_+ | SINE | Alu | Name=AluJb |
| ADediting_581457 | chr16_88668773_+ | SINE | Alu | Name=AluJb |
| ADediting_581458 | chr16_88668796_+ | SINE | Alu | Name=AluJb |
| ADediting_581459 | chr16_88669049_+ | SINE | Alu | Name=AluSz |
| ADediting_581460 | chr16_88669102_+ | SINE | Alu | Name=AluSz |
| ADediting_581461 | chr16_88669103_+ | SINE | Alu | Name=AluSz |
| ADediting_581462 | chr16_88669185_+ | SINE | Alu | Name=AluSz |
| ADediting_581463 | chr16_88669195_+ | SINE | Alu | Name=AluSz |
| ADediting_581464 | chr16_88669227_+ | SINE | Alu | Name=AluSz |
| ADediting_581465 | chr16_88669249_+ | SINE | Alu | Name=AluSz |
| ADediting_581466 | chr16_88669250_+ | SINE | Alu | Name=AluSz |
| ADediting_581467 | chr16_88669417_+ | SINE | Alu | Name=AluSz |
| ADediting_581468 | chr16_88669418_+ | SINE | Alu | Name=AluSz |
| ADediting_581469 | chr16_88669459_+ | SINE | Alu | Name=AluSz |
| ADediting_581470 | chr16_88669487_+ | SINE | Alu | Name=AluSz |
| ADediting_581471 | chr16_88669579_+ | SINE | Alu | Name=AluSz |
| ADediting_581472 | chr16_88669594_+ | SINE | Alu | Name=AluSz |
| ADediting_581473 | chr16_88670558_+ | SINE | Alu | Name=AluSg |
| ADediting_581474 | chr16_88670711_+ | SINE | Alu | Name=AluJb |
| ADediting_581475 | chr16_88670716_+ | SINE | Alu | Name=AluJb |
| ADediting_581476 | chr16_88670831_+ | SINE | Alu | Name=AluJb |
| ADediting_581477 | chr16_88670834_+ | SINE | Alu | Name=AluJb |
| ADediting_581478 | chr16_88670853_+ | SINE | Alu | Name=AluJb |
| ADediting_581479 | chr16_88670976_+ | SINE | Alu | Name=AluJb |
| ADediting_581480 | chr16_88671055_+ | SINE | Alu | Name=AluJb |
| ADediting_581482 | chr16_88675599_+ | SINE | Alu | Name=AluJb |
| ADediting_581483 | chr16_88675610_+ | SINE | Alu | Name=AluJb |
| ADediting_581484 | chr16_88675612_+ | SINE | Alu | Name=AluJb |
| ADediting_581485 | chr16_88675613_+ | SINE | Alu | Name=AluJb |
| ADediting_581486 | chr16_88675616_+ | SINE | Alu | Name=AluJb |
| ADediting_581487 | chr16_88675617_+ | SINE | Alu | Name=AluJb |
| ADediting_581488 | chr16_88675642_+ | SINE | Alu | Name=AluJb |
| ADediting_581489 | chr16_88675647_+ | SINE | Alu | Name=AluJb |
| ADediting_581490 | chr16_88675652_+ | SINE | Alu | Name=AluJb |
| ADediting_581491 | chr16_88675654_+ | SINE | Alu | Name=AluJb |
| ADediting_581492 | chr16_88675670_+ | SINE | Alu | Name=AluJb |
| ADediting_581493 | chr16_88675689_+ | SINE | Alu | Name=AluJb |
| ADediting_581494 | chr16_88675695_+ | SINE | Alu | Name=AluJb |
| ADediting_581495 | chr16_88675698_+ | SINE | Alu | Name=AluJb |
| ADediting_581496 | chr16_88675704_+ | SINE | Alu | Name=AluJb |
| ADediting_581497 | chr16_88675715_+ | SINE | Alu | Name=AluJb |
| ADediting_581498 | chr16_88675724_+ | SINE | Alu | Name=AluJb |
| ADediting_581499 | chr16_88675735_+ | SINE | Alu | Name=AluJb |
| ADediting_581500 | chr16_88675736_+ | SINE | Alu | Name=AluJb |
| ADediting_581501 | chr16_88675737_+ | SINE | Alu | Name=AluJb |
| ADediting_1544916 | chr16_88664755_+ | SINE | Alu | Name=AluJr |
| ADediting_1544917 | chr16_88666844_+ | SINE | Alu | Name=AluJb |
| ADediting_1544918 | chr16_88667398_+ | SINE | Alu | Name=AluJb |
| ADediting_1544919 | chr16_88668550_+ | SINE | Alu | Name=AluJb |
| ADediting_1544920 | chr16_88671118_+ | SINE | Alu | Name=AluJb |
| ADediting_1544921 | chr16_88675557_+ | SINE | Alu | Name=AluJb |
| ADediting_1544922 | chr16_88675706_+ | SINE | Alu | Name=AluJb |
| ADediting_1625836 | chr16_88670698_+ | SINE | Alu | Name=AluJb |
Top |
RNA A-to-I editing events in the alternative splicing sites for SNAI3-AS1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SNAI3-AS1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SNAI3-AS1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SNAI3-AS1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3940-3p | chr16 | 88675555 | 88675561 | 7mer-m8 | 88675541 | 88675562 | 154 | -24.98 |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3940-3p | chr16 | 88675555 | 88675561 | 7mer-m8 | 88675541 | 88675562 | 154 | -24.98 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-10a-5p | chr16 | 88675702 | 88675708 | 7mer-m8 | 88675687 | 88675709 | 145 | -13.67 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-10b-5p | chr16 | 88675702 | 88675708 | 7mer-m8 | 88675687 | 88675709 | 140 | -13.05 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-339-5p | chr16 | 88675701 | 88675707 | 7mer-m8 | 88675684 | 88675708 | 151 | -18.58 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4421 | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675686 | 88675707 | 154 | -16.19 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-548as-3p | chr16 | 88675705 | 88675711 | 7mer-m8 | 88675691 | 88675712 | 140 | -11.21 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-5699-3p | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675686 | 88675707 | 153 | -17.34 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6732-3p | chr16 | 88675703 | 88675709 | 7mer-m8 | 88675689 | 88675710 | 158 | -19.01 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-10a-5p | chr16 | 88675702 | 88675708 | 7mer-m8 | 88675687 | 88675709 | 145 | -13.67 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-10b-5p | chr16 | 88675702 | 88675708 | 7mer-m8 | 88675687 | 88675709 | 140 | -13.05 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-339-5p | chr16 | 88675701 | 88675707 | 7mer-m8 | 88675684 | 88675708 | 151 | -18.58 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4421 | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675686 | 88675707 | 154 | -16.19 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-548as-3p | chr16 | 88675705 | 88675711 | 7mer-m8 | 88675691 | 88675712 | 140 | -11.21 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-5699-3p | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675686 | 88675707 | 153 | -17.34 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6732-3p | chr16 | 88675703 | 88675709 | 7mer-m8 | 88675689 | 88675710 | 158 | -19.01 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-4449 | chr16 | 88674338 | 88674344 | 7mer-1a | 88674324 | 88674344 | 142 | -27.05 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-4449 | chr16 | 88674338 | 88674344 | 7mer-1a | 88674324 | 88674344 | 142 | -27.05 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-4449 | chr16 | 88674338 | 88674344 | 7mer-1a | 88674324 | 88674344 | 142 | -27.05 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-4449 | chr16 | 88674338 | 88674344 | 7mer-1a | 88674324 | 88674344 | 142 | -27.05 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-25-5p | chr16 | 88675595 | 88675601 | 7mer-m8 | 88675583 | 88675602 | 143 | -19.97 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-658 | chr16 | 88675594 | 88675600 | 7mer-m8 | 88675575 | 88675601 | 153 | -29.56 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-25-5p | chr16 | 88675595 | 88675601 | 7mer-m8 | 88675583 | 88675602 | 143 | -19.97 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-658 | chr16 | 88675594 | 88675600 | 7mer-m8 | 88675575 | 88675601 | 153 | -29.56 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-1914-5p | chr16 | 88675608 | 88675614 | 7mer-m8 | 88675594 | 88675615 | 156 | -23.08 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6514-3p | chr16 | 88675610 | 88675617 | 8mer-1a | 88675597 | 88675617 | 144 | -15.03 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6529-3p | chr16 | 88675607 | 88675613 | 7mer-m8 | 88675593 | 88675614 | 141 | -17.28 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6811-3p | chr16 | 88675609 | 88675616 | 8mer-1a | 88675596 | 88675616 | 148 | -16.98 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6889-3p | chr16 | 88675607 | 88675613 | 7mer-m8 | 88675595 | 88675614 | 145 | -17.25 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-1914-5p | chr16 | 88675608 | 88675614 | 7mer-m8 | 88675594 | 88675615 | 156 | -23.08 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6514-3p | chr16 | 88675610 | 88675617 | 8mer-1a | 88675597 | 88675617 | 144 | -15.03 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6529-3p | chr16 | 88675607 | 88675613 | 7mer-m8 | 88675593 | 88675614 | 141 | -17.28 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6811-3p | chr16 | 88675609 | 88675616 | 8mer-1a | 88675596 | 88675616 | 148 | -16.98 |
| ADediting_581485 | chr16_88675613_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6889-3p | chr16 | 88675607 | 88675613 | 7mer-m8 | 88675595 | 88675614 | 145 | -17.25 |
| ADediting_581487 | chr16_88675617_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-1288-3p | chr16 | 88675614 | 88675620 | 7mer-m8 | 88675600 | 88675621 | 150 | -22.27 |
| ADediting_581487 | chr16_88675617_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3169 | chr16 | 88675615 | 88675621 | 7mer-m8 | 88675602 | 88675622 | 155 | -19.8 |
| ADediting_581487 | chr16_88675617_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-1288-3p | chr16 | 88675614 | 88675620 | 7mer-m8 | 88675600 | 88675621 | 150 | -22.27 |
| ADediting_581487 | chr16_88675617_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3169 | chr16 | 88675615 | 88675621 | 7mer-m8 | 88675602 | 88675622 | 155 | -19.8 |
| ADediting_581488 | chr16_88675642_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6807-5p | chr16 | 88675641 | 88675647 | 7mer-m8 | 88675626 | 88675648 | 143 | -22.59 |
| ADediting_581488 | chr16_88675642_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6807-5p | chr16 | 88675641 | 88675647 | 7mer-m8 | 88675626 | 88675648 | 143 | -22.59 |
| ADediting_581490 | chr16_88675652_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-17-3p | chr16 | 88675649 | 88675655 | 7mer-m8 | 88675635 | 88675656 | 142 | -19.43 |
| ADediting_581490 | chr16_88675652_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-622 | chr16 | 88675646 | 88675652 | 7mer-m8 | 88675633 | 88675653 | 140 | -17.64 |
| ADediting_581490 | chr16_88675652_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-17-3p | chr16 | 88675649 | 88675655 | 7mer-m8 | 88675635 | 88675656 | 142 | -19.43 |
| ADediting_581490 | chr16_88675652_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-622 | chr16 | 88675646 | 88675652 | 7mer-m8 | 88675633 | 88675653 | 140 | -17.64 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-1285-3p | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675655 | 88675676 | 140 | -18.02 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3187-5p | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675654 | 88675676 | 149 | -21.16 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3622b-5p | chr16 | 88675666 | 88675672 | 7mer-m8 | 88675654 | 88675673 | 143 | -17.25 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4253 | chr16 | 88675667 | 88675674 | 8mer-1a | 88675657 | 88675674 | 140 | -14.06 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-5189-5p | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675654 | 88675676 | 145 | -20.01 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-612 | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675653 | 88675676 | 153 | -29.06 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6860 | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675655 | 88675676 | 148 | -19.63 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6862-5p | chr16 | 88675667 | 88675674 | 8mer-1a | 88675653 | 88675674 | 156 | -20.49 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-1285-3p | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675655 | 88675676 | 140 | -18.02 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3187-5p | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675654 | 88675676 | 149 | -21.16 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3622b-5p | chr16 | 88675666 | 88675672 | 7mer-m8 | 88675654 | 88675673 | 143 | -17.25 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4253 | chr16 | 88675667 | 88675674 | 8mer-1a | 88675657 | 88675674 | 140 | -14.06 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-5189-5p | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675654 | 88675676 | 145 | -20.01 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-612 | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675653 | 88675676 | 153 | -29.06 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6860 | chr16 | 88675669 | 88675675 | 7mer-m8 | 88675655 | 88675676 | 148 | -19.63 |
| ADediting_581492 | chr16_88675670_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6862-5p | chr16 | 88675667 | 88675674 | 8mer-1a | 88675653 | 88675674 | 156 | -20.49 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-340-3p | chr16 | 88675699 | 88675706 | 8mer-1a | 88675685 | 88675706 | 149 | -18.08 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6827-3p | chr16 | 88675699 | 88675706 | 8mer-1a | 88675686 | 88675706 | 153 | -17.62 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-340-3p | chr16 | 88675699 | 88675706 | 8mer-1a | 88675685 | 88675706 | 149 | -18.08 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6827-3p | chr16 | 88675699 | 88675706 | 8mer-1a | 88675686 | 88675706 | 153 | -17.62 |
| ADediting_581497 | chr16_88675715_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4445-3p | chr16 | 88675710 | 88675716 | 7mer-m8 | 88675697 | 88675717 | 150 | -16.98 |
| ADediting_581497 | chr16_88675715_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-548al | chr16 | 88675710 | 88675716 | 7mer-m8 | 88675698 | 88675717 | 154 | -17.48 |
| ADediting_581497 | chr16_88675715_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4445-3p | chr16 | 88675710 | 88675716 | 7mer-m8 | 88675697 | 88675717 | 150 | -16.98 |
| ADediting_581497 | chr16_88675715_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-548al | chr16 | 88675710 | 88675716 | 7mer-m8 | 88675698 | 88675717 | 154 | -17.48 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3940-3p | chr16 | 88675722 | 88675728 | 7mer-m8 | 88675708 | 88675729 | 143 | -21.15 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3940-3p | chr16 | 88675722 | 88675728 | 7mer-m8 | 88675708 | 88675729 | 143 | -21.15 |
| ADediting_581500 | chr16_88675736_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4294 | chr16 | 88675735 | 88675741 | 7mer-m8 | 88675725 | 88675742 | 150 | -18.29 |
| ADediting_581500 | chr16_88675736_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4329 | chr16 | 88675730 | 88675737 | 8mer-1a | 88675719 | 88675737 | 145 | -14.9 |
| ADediting_581500 | chr16_88675736_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4294 | chr16 | 88675735 | 88675741 | 7mer-m8 | 88675725 | 88675742 | 150 | -18.29 |
| ADediting_581500 | chr16_88675736_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4329 | chr16 | 88675730 | 88675737 | 8mer-1a | 88675719 | 88675737 | 145 | -14.9 |
| ADediting_581501 | chr16_88675737_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-28-5p | chr16 | 88675736 | 88675742 | 7mer-m8 | 88675723 | 88675743 | 143 | -18.76 |
| ADediting_581501 | chr16_88675737_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3139 | chr16 | 88675736 | 88675742 | 7mer-m8 | 88675721 | 88675743 | 157 | -23.25 |
| ADediting_581501 | chr16_88675737_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-708-5p | chr16 | 88675736 | 88675742 | 7mer-m8 | 88675722 | 88675743 | 154 | -22.59 |
| ADediting_581501 | chr16_88675737_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-28-5p | chr16 | 88675736 | 88675742 | 7mer-m8 | 88675723 | 88675743 | 143 | -18.76 |
| ADediting_581501 | chr16_88675737_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3139 | chr16 | 88675736 | 88675742 | 7mer-m8 | 88675721 | 88675743 | 157 | -23.25 |
| ADediting_581501 | chr16_88675737_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-708-5p | chr16 | 88675736 | 88675742 | 7mer-m8 | 88675722 | 88675743 | 154 | -22.59 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4486 | chr16 | 88675552 | 88675558 | 7mer-m8 | 88675541 | 88675559 | 150 | -23.59 |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-661 | chr16 | 88675554 | 88675560 | 7mer-m8 | 88675538 | 88675561 | 154 | -23.92 |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-939-3p | chr16 | 88675553 | 88675559 | 7mer-m8 | 88675540 | 88675560 | 144 | -17.65 |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4486 | chr16 | 88675552 | 88675558 | 7mer-m8 | 88675541 | 88675559 | 150 | -23.59 |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-661 | chr16 | 88675554 | 88675560 | 7mer-m8 | 88675538 | 88675561 | 154 | -23.92 |
| ADediting_1544921 | chr16_88675557_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-939-3p | chr16 | 88675553 | 88675559 | 7mer-m8 | 88675540 | 88675560 | 144 | -17.65 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6888-3p | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675687 | 88675707 | 154 | -14.28 |
| ADediting_1544922 | chr16_88675706_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6888-3p | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675687 | 88675707 | 154 | -14.28 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-1200 | chr16 | 88674336 | 88674342 | 7mer-m8 | 88674325 | 88674343 | 154 | -19.71 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-1200 | chr16 | 88674336 | 88674342 | 7mer-m8 | 88674325 | 88674343 | 154 | -19.71 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-1200 | chr16 | 88674336 | 88674342 | 7mer-m8 | 88674325 | 88674343 | 154 | -19.71 |
| ADediting_581481 | chr16_88674339_+ | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-1200 | chr16 | 88674336 | 88674342 | 7mer-m8 | 88674325 | 88674343 | 154 | -19.71 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-3689d | chr16 | 88675598 | 88675604 | 7mer-m8 | 88675585 | 88675605 | 146 | -14.77 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6851-5p | chr16 | 88675598 | 88675604 | 7mer-m8 | 88675579 | 88675605 | 155 | -31.77 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-7847-3p | chr16 | 88675594 | 88675600 | 7mer-m8 | 88675579 | 88675601 | 146 | -19.07 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-3689d | chr16 | 88675598 | 88675604 | 7mer-m8 | 88675585 | 88675605 | 146 | -14.77 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6851-5p | chr16 | 88675598 | 88675604 | 7mer-m8 | 88675579 | 88675605 | 155 | -31.77 |
| ADediting_581482 | chr16_88675599_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-7847-3p | chr16 | 88675594 | 88675600 | 7mer-m8 | 88675579 | 88675601 | 146 | -19.07 |
| ADediting_581489 | chr16_88675647_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4303 | chr16 | 88675643 | 88675649 | 7mer-m8 | 88675631 | 88675650 | 149 | -16.98 |
| ADediting_581489 | chr16_88675647_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4303 | chr16 | 88675643 | 88675649 | 7mer-m8 | 88675631 | 88675650 | 149 | -16.98 |
| ADediting_581495 | chr16_88675698_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-593-3p | chr16 | 88675698 | 88675704 | 7mer-1a | 88675686 | 88675704 | 140 | -19.02 |
| ADediting_581495 | chr16_88675698_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-593-3p | chr16 | 88675698 | 88675704 | 7mer-1a | 88675686 | 88675704 | 140 | -19.02 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6818-3p | chr16 | 88675698 | 88675704 | 7mer-m8 | 88675684 | 88675705 | 140 | -12.56 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6888-3p | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675687 | 88675707 | 154 | -14.28 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6818-3p | chr16 | 88675698 | 88675704 | 7mer-m8 | 88675684 | 88675705 | 140 | -12.56 |
| ADediting_581496 | chr16_88675704_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6888-3p | chr16 | 88675700 | 88675706 | 7mer-m8 | 88675687 | 88675707 | 154 | -14.28 |
| ADediting_581497 | chr16_88675715_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-942-3p | chr16 | 88675712 | 88675718 | 7mer-m8 | 88675699 | 88675719 | 152 | -14.39 |
| ADediting_581497 | chr16_88675715_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-942-3p | chr16 | 88675712 | 88675718 | 7mer-m8 | 88675699 | 88675719 | 152 | -14.39 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-5189-5p | chr16 | 88675719 | 88675725 | 7mer-m8 | 88675701 | 88675726 | 154 | -24.18 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-612 | chr16 | 88675719 | 88675725 | 7mer-m8 | 88675702 | 88675726 | 154 | -24.32 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-661 | chr16 | 88675721 | 88675727 | 7mer-m8 | 88675704 | 88675728 | 151 | -22.73 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-6860 | chr16 | 88675719 | 88675725 | 7mer-m8 | 88675708 | 88675726 | 148 | -19.34 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-939-3p | chr16 | 88675720 | 88675726 | 7mer-m8 | 88675707 | 88675727 | 140 | -15.63 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-5189-5p | chr16 | 88675719 | 88675725 | 7mer-m8 | 88675701 | 88675726 | 154 | -24.18 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-612 | chr16 | 88675719 | 88675725 | 7mer-m8 | 88675702 | 88675726 | 154 | -24.32 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-661 | chr16 | 88675721 | 88675727 | 7mer-m8 | 88675704 | 88675728 | 151 | -22.73 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-6860 | chr16 | 88675719 | 88675725 | 7mer-m8 | 88675708 | 88675726 | 148 | -19.34 |
| ADediting_581498 | chr16_88675724_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-939-3p | chr16 | 88675720 | 88675726 | 7mer-m8 | 88675707 | 88675727 | 140 | -15.63 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000260630.7 | ENST00000563261.6 | SNAI3-AS1-201 | hsa-miR-5688 | chr16 | 88687064 | 88687070 | 7mer-m8 | 88687050 | 88687071 | 155 | -13.56 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000260630.7 | ENST00000567997.1 | SNAI3-AS1-204 | hsa-miR-5688 | chr16 | 88687064 | 88687070 | 7mer-m8 | 88687050 | 88687071 | 155 | -13.56 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-589-3p | chr16 | 88674013 | 88674019 | 7mer-m8 | 88673997 | 88674020 | 140 | -14.39 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-589-3p | chr16 | 88674013 | 88674019 | 7mer-m8 | 88673997 | 88674020 | 140 | -14.39 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-589-3p | chr16 | 88674013 | 88674019 | 7mer-m8 | 88673997 | 88674020 | 140 | -14.39 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-589-3p | chr16 | 88674013 | 88674019 | 7mer-m8 | 88673997 | 88674020 | 140 | -14.39 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-4477b | chr16 | 88675337 | 88675343 | 7mer-m8 | 88675322 | 88675344 | 143 | -9.45 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-4477b | chr16 | 88675337 | 88675343 | 7mer-m8 | 88675322 | 88675344 | 143 | -9.45 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-4477b | chr16 | 88675337 | 88675343 | 7mer-m8 | 88675322 | 88675344 | 143 | -9.45 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-4477b | chr16 | 88675337 | 88675343 | 7mer-m8 | 88675322 | 88675344 | 143 | -9.45 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000260630.7 | ENST00000567997.1 | SNAI3-AS1-204 | hsa-miR-4477b | chr16 | 88685604 | 88685610 | 7mer-m8 | 88685590 | 88685611 | 157 | -16.79 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000260630.7 | ENST00000654033.1 | SNAI3-AS1-207 | hsa-miR-337-3p | chr16 | 88675788 | 88675794 | 7mer-m8 | 88675776 | 88675795 | 145 | -19.95 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-337-3p | chr16 | 88675788 | 88675794 | 7mer-m8 | 88675776 | 88675795 | 145 | -19.95 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000260630.7 | ENST00000663493.1 | SNAI3-AS1-210 | hsa-miR-381-3p | chr16 | 88667855 | 88667861 | 7mer-m8 | 88667842 | 88667862 | 146 | -13.22 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-556-3p | chr16 | 88674036 | 88674043 | 8mer-1a | 88674022 | 88674043 | 152 | -10.25 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-556-3p | chr16 | 88674036 | 88674043 | 8mer-1a | 88674022 | 88674043 | 152 | -10.25 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-556-3p | chr16 | 88674036 | 88674043 | 8mer-1a | 88674022 | 88674043 | 152 | -10.25 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-556-3p | chr16 | 88674036 | 88674043 | 8mer-1a | 88674022 | 88674043 | 152 | -10.25 |
| ADediting_291761 | chr11_93733708_- | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-1304-3p | chr16 | 88674189 | 88674196 | 8mer-1a | 88674177 | 88674196 | 148 | -21.05 |
| ADediting_291761 | chr11_93733708_- | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-1304-3p | chr16 | 88674189 | 88674196 | 8mer-1a | 88674177 | 88674196 | 148 | -21.05 |
| ADediting_291761 | chr11_93733708_- | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-1304-3p | chr16 | 88674189 | 88674196 | 8mer-1a | 88674177 | 88674196 | 148 | -21.05 |
| ADediting_291761 | chr11_93733708_- | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-1304-3p | chr16 | 88674189 | 88674196 | 8mer-1a | 88674177 | 88674196 | 148 | -21.05 |
| ADediting_496066 | chr15_66496985_- | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-4512 | chr16 | 88674876 | 88674882 | 7mer-m8 | 88674861 | 88674883 | 142 | -16.4 |
| ADediting_496066 | chr15_66496985_- | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-4512 | chr16 | 88674876 | 88674882 | 7mer-m8 | 88674861 | 88674883 | 142 | -16.4 |
| ADediting_496066 | chr15_66496985_- | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-4512 | chr16 | 88674876 | 88674882 | 7mer-m8 | 88674861 | 88674883 | 142 | -16.4 |
| ADediting_496066 | chr15_66496985_- | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-4512 | chr16 | 88674876 | 88674882 | 7mer-m8 | 88674861 | 88674883 | 142 | -16.4 |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-589-3p | chr16 | 88673822 | 88673828 | 7mer-m8 | 88673807 | 88673829 | 142 | -14.79 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-589-3p | chr16 | 88673822 | 88673828 | 7mer-m8 | 88673807 | 88673829 | 142 | -14.79 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-589-3p | chr16 | 88673822 | 88673828 | 7mer-m8 | 88673807 | 88673829 | 142 | -14.79 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-589-3p | chr16 | 88673822 | 88673828 | 7mer-m8 | 88673807 | 88673829 | 142 | -14.79 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000260630.7 | ENST00000563475.2 | SNAI3-AS1-202 | hsa-miR-337-3p | chr16 | 88674006 | 88674012 | 7mer-m8 | 88673993 | 88674013 | 154 | -8.29 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000260630.7 | ENST00000568633.1 | SNAI3-AS1-205 | hsa-miR-337-3p | chr16 | 88674006 | 88674012 | 7mer-m8 | 88673993 | 88674013 | 154 | -8.29 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000260630.7 | ENST00000661622.1 | SNAI3-AS1-208 | hsa-miR-337-3p | chr16 | 88674006 | 88674012 | 7mer-m8 | 88673993 | 88674013 | 154 | -8.29 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000260630.7 | ENST00000669434.1 | SNAI3-AS1-211 | hsa-miR-337-3p | chr16 | 88674006 | 88674012 | 7mer-m8 | 88673993 | 88674013 | 154 | -8.29 |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for SNAI3-AS1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000669434.1 | lncRNA |  |  |
| ENST00000563475.2 | lncRNA |  |  |
| ENST00000654033.1 | lncRNA |  |  |
| ENST00000661622.1 | lncRNA |  |  |
| ENST00000663493.1 | lncRNA |  |  |
| ENST00000568633.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_581481 | ENST00000669434.1 | chr16_88674339_+ | 1301 | -1013.80 | -1011.70 | -1013.80 |
| ADediting_581481 | ENST00000563475.2 | chr16_88674339_+ | 1250 | -835.70 | -833.60 | -835.70 |
| ADediting_1544921 | ENST00000654033.1 | chr16_88675557_+ | 1220 | -729.60 | -729.70 | -760.70 |
| ADediting_581482 | ENST00000654033.1 | chr16_88675599_+ | 1262 | -731.60 | -729.70 | -760.70 |
| ADediting_581483 | ENST00000654033.1 | chr16_88675610_+ | 1273 | -730.50 | -729.70 | -760.70 |
| ADediting_581484 | ENST00000654033.1 | chr16_88675612_+ | 1275 | -729.90 | -729.70 | -760.70 |
| ADediting_581485 | ENST00000654033.1 | chr16_88675613_+ | 1276 | -734.50 | -729.70 | -760.70 |
| ADediting_581486 | ENST00000654033.1 | chr16_88675616_+ | 1279 | -731.10 | -729.70 | -760.70 |
| ADediting_581487 | ENST00000654033.1 | chr16_88675617_+ | 1280 | -731.20 | -729.70 | -760.70 |
| ADediting_581488 | ENST00000654033.1 | chr16_88675642_+ | 1305 | -729.20 | -729.70 | -760.70 |
| ADediting_581489 | ENST00000654033.1 | chr16_88675647_+ | 1310 | -731.40 | -729.70 | -760.70 |
| ADediting_581490 | ENST00000654033.1 | chr16_88675652_+ | 1315 | -730.70 | -729.70 | -760.70 |
| ADediting_581491 | ENST00000654033.1 | chr16_88675654_+ | 1317 | -732.70 | -729.70 | -760.70 |
| ADediting_581492 | ENST00000654033.1 | chr16_88675670_+ | 1333 | -732.90 | -729.70 | -760.70 |
| ADediting_581493 | ENST00000654033.1 | chr16_88675689_+ | 1352 | -730.70 | -729.70 | -760.70 |
| ADediting_581494 | ENST00000654033.1 | chr16_88675695_+ | 1358 | -729.10 | -729.70 | -760.70 |
| ADediting_581495 | ENST00000654033.1 | chr16_88675698_+ | 1361 | -735.50 | -729.70 | -760.70 |
| ADediting_581496 | ENST00000654033.1 | chr16_88675704_+ | 1367 | -729.90 | -729.70 | -760.70 |
| ADediting_1544922 | ENST00000654033.1 | chr16_88675706_+ | 1369 | -735.10 | -729.70 | -760.70 |
| ADediting_581497 | ENST00000654033.1 | chr16_88675715_+ | 1378 | -729.30 | -729.70 | -760.70 |
| ADediting_581498 | ENST00000654033.1 | chr16_88675724_+ | 1387 | -729.00 | -729.70 | -760.70 |
| ADediting_581499 | ENST00000654033.1 | chr16_88675735_+ | 1398 | -729.70 | -729.70 | -760.70 |
| ADediting_581500 | ENST00000654033.1 | chr16_88675736_+ | 1399 | -729.70 | -729.70 | -760.70 |
| ADediting_581501 | ENST00000654033.1 | chr16_88675737_+ | 1400 | -730.00 | -729.70 | -760.70 |
| ADediting_581481 | ENST00000661622.1 | chr16_88674339_+ | 1502 | -912.80 | -910.70 | -912.80 |
| ADediting_1544921 | ENST00000663493.1 | chr16_88675557_+ | 1400 | -802.90 | -803.00 | -834.00 |
| ADediting_581482 | ENST00000663493.1 | chr16_88675599_+ | 1442 | -804.90 | -803.00 | -834.00 |
| ADediting_581483 | ENST00000663493.1 | chr16_88675610_+ | 1453 | -803.80 | -803.00 | -834.00 |
| ADediting_581484 | ENST00000663493.1 | chr16_88675612_+ | 1455 | -803.20 | -803.00 | -834.00 |
| ADediting_581485 | ENST00000663493.1 | chr16_88675613_+ | 1456 | -807.80 | -803.00 | -834.00 |
| ADediting_581486 | ENST00000663493.1 | chr16_88675616_+ | 1459 | -804.40 | -803.00 | -834.00 |
| ADediting_581487 | ENST00000663493.1 | chr16_88675617_+ | 1460 | -804.50 | -803.00 | -834.00 |
| ADediting_581488 | ENST00000663493.1 | chr16_88675642_+ | 1485 | -802.50 | -803.00 | -834.00 |
| ADediting_581489 | ENST00000663493.1 | chr16_88675647_+ | 1490 | -804.70 | -803.00 | -834.00 |
| ADediting_581490 | ENST00000663493.1 | chr16_88675652_+ | 1495 | -804.00 | -803.00 | -834.00 |
| ADediting_581491 | ENST00000663493.1 | chr16_88675654_+ | 1497 | -806.00 | -803.00 | -834.00 |
| ADediting_581492 | ENST00000663493.1 | chr16_88675670_+ | 1513 | -806.20 | -803.00 | -834.00 |
| ADediting_581493 | ENST00000663493.1 | chr16_88675689_+ | 1532 | -804.00 | -803.00 | -834.00 |
| ADediting_581494 | ENST00000663493.1 | chr16_88675695_+ | 1538 | -802.40 | -803.00 | -834.00 |
| ADediting_581495 | ENST00000663493.1 | chr16_88675698_+ | 1541 | -808.80 | -803.00 | -834.00 |
| ADediting_581496 | ENST00000663493.1 | chr16_88675704_+ | 1547 | -803.20 | -803.00 | -834.00 |
| ADediting_1544922 | ENST00000663493.1 | chr16_88675706_+ | 1549 | -808.40 | -803.00 | -834.00 |
| ADediting_581497 | ENST00000663493.1 | chr16_88675715_+ | 1558 | -802.60 | -803.00 | -834.00 |
| ADediting_581498 | ENST00000663493.1 | chr16_88675724_+ | 1567 | -802.30 | -803.00 | -834.00 |
| ADediting_581499 | ENST00000663493.1 | chr16_88675735_+ | 1578 | -803.00 | -803.00 | -834.00 |
| ADediting_581500 | ENST00000663493.1 | chr16_88675736_+ | 1579 | -803.00 | -803.00 | -834.00 |
| ADediting_581501 | ENST00000663493.1 | chr16_88675737_+ | 1580 | -803.30 | -803.00 | -834.00 |
| ADediting_581481 | ENST00000568633.1 | chr16_88674339_+ | 944 | -818.80 | -816.70 | -818.80 |
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Relation with ADAR for SNAI3-AS1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_581431 | chr16_88666482_+ | 0.0078562060676783 | 0.150720410758758 | 0.393639725477806 | 0.0486168942489974 | 3.65012232794539e-14 | 0.412476758512379 |
| DLPFC | ADediting_581434 | chr16_88667113_+ | 0.790953699198784 | -0.0151153018906076 | 0.069079592388995 | -0.103390525540685 | 1.19850118200292e-11 | 0.372646876977531 |
| DLPFC | ADediting_581437 | chr16_88667137_+ | 0.60253562328877 | -0.0296904665647608 | 0.0816795016585012 | -0.0990403257685577 | 3.49951381821399e-08 | 0.306849263935127 |
| DLPFC | ADediting_581438 | chr16_88667149_+ | 0.361871271839047 | 0.0519619755696839 | 0.283933862999507 | -0.061048316692559 | 4.06989719570099e-18 | 0.466005159634277 |
| DLPFC | ADediting_581465 | chr16_88669249_+ | 0.575219688848307 | 0.0319484315575154 | 0.342196374558892 | -0.0541260727960649 | 4.03437269985895e-14 | 0.411832101049148 |
| DLPFC | ADediting_581472 | chr16_88669594_+ | 0.716785512728486 | 0.0206846381227917 | 0.370124997787628 | -0.0510760711633711 | 2.29093367475597e-08 | 0.310765337941534 |
| DLPFC | ADediting_581473 | chr16_88670558_+ | 0.86938965996373 | -0.00937688710618854 | 0.190467023128483 | -0.0745551549723746 | 4.02864922543895e-11 | 0.363582787956049 |
| TCX | ADediting_581496 | chr16_88675704_+ | 0.0248319642008045 | 0.183201394729161 | 6.02847620196718e-05 | 0.321503329603186 | 0.659700086674874 | 0.0362439522331364 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.79305818087481e-15 | 0.43126589754459 | 3.14244885953786e-19 | 0.479514031190771 | 6.8586836426845e-20 | 0.487267783968025 |
| AC | 9.05591533235297e-11 | 0.395129706709697 | 4.33305101885964e-21 | 0.549096450006518 | 0.0341052490795931 | 0.134072580247088 |
| PCC | 3.08867320882631e-21 | 0.614745455513853 | 1.17751143816097e-24 | 0.653659888618896 | 0.123117786026135 | 0.111945933121253 |
| TCX | 3.89903135057815e-07 | 0.400178849363556 | 6.62213121258042e-15 | 0.580828096309532 | 0.000129527784306712 | -0.307469613424669 |
| FP | 2.10140907440758e-18 | 0.594664801967775 | 1.23443461756007e-15 | 0.552823942167334 | 6.9351489216241e-05 | 0.293668087690031 |
| IFG | 4.9439927416407e-07 | 0.821048864422403 | 4.69012484847101e-05 | 0.721533940055614 | 0.290762194448827 | 0.219949532261089 |
| PG | 0.00120114035327839 | 0.235700573319702 | 4.87639387901162e-10 | 0.436177424220548 | 0.334534923471716 | -0.0711485955779085 |
| STG | 4.09561463083215e-17 | 0.761565462464099 | 1.72807069824246e-14 | 0.716900118634902 | 0.10264311579836 | 0.179324832496274 |
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Relation with AD stages for SNAI3-AS1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_581498 | chr16_88675724_+ | 0.0449220351546537 | -0.404459265579513 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for SNAI3-AS1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SNAI3-AS1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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