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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for DPYD |
Gene summary |
| Gene information | Gene symbol | DPYD | Gene ID | 1806 |
| Gene name | dihydropyrimidine dehydrogenase | |
| Synonyms | DHP|DHPDHASE|DPD | |
| Cytomap | 1p21.3 | |
| Type of gene | protein-coding | |
| Description | dihydropyrimidine dehydrogenase [NADP(+)]dihydrothymine dehydrogenasedihydrouracil dehydrogenase | |
| Modification date | 20200313 | |
| UniProtAcc | Q12882, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| DPYD | GO:0006210 | thymine catabolic process | 10410956 |
| DPYD | GO:0006212 | uracil catabolic process | 1512248|18075467 |
| DPYD | GO:0006214 | thymidine catabolic process | 1512248 |
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RNA A-to-I events for DPYD |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_152301(97333617, -), ADediting_152302(97333618, -), ADediting_152303(97333658, -), ADediting_152304(97333659, -), ADediting_152329(97405584, -), ADediting_152330(97405601, -), ADediting_152342(97440019, -), ADediting_152343(97440153, -), ADediting_152344(97445818, -), ADediting_152431(97484102, -), ADediting_152432(97484139, -), ADediting_152433(97484220, -), ADediting_152434(97485270, -), ADediting_152444(97487484, -), ADediting_152470(97522529, -), ADediting_152471(97522533, -), ADediting_152472(97522610, -), ADediting_152473(97522611, -), ADediting_152474(97522619, -), ADediting_152525(97549112, -), ADediting_152526(97549139, -), ADediting_152527(97549140, -), ADediting_152528(97549202, -), ADediting_152529(97549231, -), ADediting_152530(97549285, -), ADediting_152646(97657228, -), ADediting_152648(97662090, -), ADediting_152649(97662097, -), ADediting_152650(97662139, -), ADediting_152651(97662165, -), ADediting_152652(97662172, -), ADediting_152653(97662181, -), ADediting_152654(97662184, -), ADediting_152655(97662195, -), ADediting_152656(97662205, -), ADediting_152657(97662258, -), ADediting_152658(97662398, -), ADediting_152659(97662419, -), ADediting_152660(97662457, -), ADediting_152661(97662463, -), ADediting_152662(97662465, -), ADediting_152663(97662468, -), ADediting_152664(97662474, -), ADediting_152665(97662484, -), ADediting_152666(97662485, -), ADediting_152667(97662511, -), ADediting_152668(97662521, -), ADediting_152669(97662524, -), ADediting_152670(97662533, -), ADediting_152671(97662569, -), ADediting_152672(97662570, -), ADediting_152673(97662618, -), ADediting_152674(97662627, -), ADediting_152737(97730319, -), ADediting_152738(97730320, -), ADediting_152739(97730327, -), ADediting_152740(97730386, -), ADediting_152741(97730427, -), ADediting_152742(97730428, -), ADediting_152743(97732287, -), ADediting_152744(97732308, -), ADediting_152745(97732312, -), ADediting_152746(97732351, -), ADediting_152747(97732353, -), ADediting_152748(97732363, -), ADediting_152749(97732392, -), ADediting_152750(97732393, -), ADediting_152766(97823293, -), ADediting_152823(97927989, -), ADediting_152828(97944110, -), ADediting_152829(97944115, -), ADediting_152830(97944129, -), ADediting_152831(97944164, -), ADediting_152832(97944197, -), ADediting_152834(97944217, -), ADediting_152835(97944286, -), ADediting_152836(97944298, -), ADediting_152837(97944302, -), ADediting_152838(97944304, -), ADediting_152839(97944305, -), ADediting_152840(97944348, -), ADediting_152841(97944349, -), ADediting_152849(97946106, -), ADediting_152850(97946175, -), ADediting_152851(97946191, -), ADediting_152852(97946203, -), ADediting_152853(97946216, -), ADediting_152854(97946220, -), ADediting_152855(97946221, -), ADediting_152856(97946227, -), ADediting_152857(97946255, -), ADediting_152858(97946258, -), ADediting_152859(97946280, -), ADediting_152865(97962033, -), ADediting_152866(97962042, -), ADediting_152867(97962073, -), ADediting_152868(97962079, -), ADediting_152869(97962110, -), ADediting_152870(97962118, -), ADediting_152871(97962121, -), ADediting_152872(97962124, -), ADediting_152873(97962152, -), ADediting_152874(97962178, -), ADediting_152875(97962181, -), ADediting_152876(97962190, -), ADediting_152877(97962205, -), ADediting_152878(97962207, -), ADediting_152879(97962214, -), ADediting_152880(97962426, -), ADediting_152881(97962461, -), ADediting_152882(97962508, -), ADediting_152883(97962512, -), ADediting_152884(97962523, -), ADediting_152885(97962525, -), ADediting_152886(97962526, -), ADediting_152887(97962533, -), ADediting_152888(97962580, -), ADediting_152889(97962585, -), ADediting_152890(97962594, -), ADediting_152891(97962602, -), ADediting_152892(97962603, -), ADediting_152893(97962630, -), ADediting_152896(97969603, -), ADediting_152897(97969715, -), ADediting_152898(97969737, -), ADediting_152899(97969754, -), ADediting_152902(97983722, -), ADediting_152903(97983730, -), ADediting_152904(97985127, -), ADediting_152905(97985211, -), ADediting_152907(97989462, -), ADediting_152908(97989472, -), ADediting_152909(97989489, -), ADediting_152910(97989490, -), ADediting_152911(97989497, -), ADediting_152912(97989510, -), ADediting_152913(97989512, -), ADediting_152914(97989533, -), ADediting_152915(97989546, -), ADediting_152916(97990364, -), ADediting_152917(97990926, -), ADediting_152918(97990927, -), ADediting_152919(97990962, -), ADediting_152920(97990963, -), ADediting_152921(97990973, -), ADediting_152922(97992270, -), ADediting_152923(97994305, -), ADediting_152924(97994315, -), ADediting_152925(97994318, -), ADediting_152926(97994325, -), ADediting_152927(97994345, -), ADediting_152928(97994359, -), ADediting_152929(97994368, -), ADediting_152930(97994380, -), ADediting_152931(97994381, -), ADediting_152932(97994391, -), ADediting_152933(97994411, -), ADediting_152934(97994415, -), ADediting_152935(97994421, -), ADediting_152936(97994429, -), ADediting_152937(97994439, -), ADediting_152938(97994466, -), ADediting_152939(97994567, -), ADediting_1521929(97730451, -), ADediting_1521930(97730496, -), ADediting_1603300(97331217, -), ADediting_1603301(97356131, -), ADediting_1603302(97356155, -), ADediting_1603303(97445934, -), ADediting_1603304(97448056, -), ADediting_1603305(97448058, -), ADediting_1603306(97470938, -), ADediting_1603307(97471657, -), ADediting_1603308(97471667, -), ADediting_1603309(97548544, -), ADediting_1603310(97548588, -), ADediting_1603311(97548618, -), ADediting_1603312(97548717, -), ADediting_1603313(97549223, -), ADediting_1603314(97549248, -), ADediting_1603315(97549284, -), ADediting_1603316(97585434, -), ADediting_1603317(97585441, -), ADediting_1603318(97585442, -), ADediting_1603319(97585465, -), ADediting_1603320(97585476, -), ADediting_1603321(97587158, -), ADediting_1603322(97587190, -), ADediting_1603323(97587192, -), ADediting_1603324(97587198, -), ADediting_1603325(97587205, -), ADediting_1603326(97587206, -), ADediting_1603327(97587214, -), ADediting_1603328(97587217, -), ADediting_1603329(97587222, -), ADediting_1603330(97587230, -), ADediting_1603331(97587245, -), ADediting_1603332(97627150, -), ADediting_1603333(97662114, -), ADediting_1603334(97662133, -), ADediting_1603335(97662168, -), ADediting_1603336(97662170, -), ADediting_1603337(97662509, -), ADediting_1603338(97730362, -), ADediting_1603339(97732295, -), ADediting_1603340(97732309, -), ADediting_1603343(97881130, -), ADediting_1603344(97887387, -), ADediting_1603345(97916803, -), ADediting_1603349(97946239, -), ADediting_1603350(97946240, -), ADediting_1603351(97962142, -), ADediting_1603352(97962168, -), ADediting_1603353(97962251, -), ADediting_1603354(97962496, -), ADediting_1603355(97962626, -), ADediting_1603356(97994354, -), |
Top |
RNA editing positional annotations for DPYD using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_152301 | chr1_97333617_- | intronic |
| ADediting_152302 | chr1_97333618_- | intronic |
| ADediting_152303 | chr1_97333658_- | intronic |
| ADediting_152304 | chr1_97333659_- | intronic |
| ADediting_152329 | chr1_97405584_- | ncRNA_intronic |
| ADediting_152330 | chr1_97405601_- | ncRNA_intronic |
| ADediting_152342 | chr1_97440019_- | intronic |
| ADediting_152343 | chr1_97440153_- | intronic |
| ADediting_152344 | chr1_97445818_- | intronic |
| ADediting_152431 | chr1_97484102_- | intronic |
| ADediting_152432 | chr1_97484139_- | intronic |
| ADediting_152433 | chr1_97484220_- | intronic |
| ADediting_152434 | chr1_97485270_- | intronic |
| ADediting_152444 | chr1_97487484_- | intronic |
| ADediting_152470 | chr1_97522529_- | intronic |
| ADediting_152471 | chr1_97522533_- | intronic |
| ADediting_152472 | chr1_97522610_- | intronic |
| ADediting_152473 | chr1_97522611_- | intronic |
| ADediting_152474 | chr1_97522619_- | intronic |
| ADediting_152525 | chr1_97549112_- | intronic |
| ADediting_152526 | chr1_97549139_- | intronic |
| ADediting_152527 | chr1_97549140_- | intronic |
| ADediting_152528 | chr1_97549202_- | intronic |
| ADediting_152529 | chr1_97549231_- | intronic |
| ADediting_152530 | chr1_97549285_- | intronic |
| ADediting_152646 | chr1_97657228_- | intronic |
| ADediting_152648 | chr1_97662090_- | intronic |
| ADediting_152649 | chr1_97662097_- | intronic |
| ADediting_152650 | chr1_97662139_- | intronic |
| ADediting_152651 | chr1_97662165_- | intronic |
| ADediting_152652 | chr1_97662172_- | intronic |
| ADediting_152653 | chr1_97662181_- | intronic |
| ADediting_152654 | chr1_97662184_- | intronic |
| ADediting_152655 | chr1_97662195_- | intronic |
| ADediting_152656 | chr1_97662205_- | intronic |
| ADediting_152657 | chr1_97662258_- | intronic |
| ADediting_152658 | chr1_97662398_- | intronic |
| ADediting_152659 | chr1_97662419_- | intronic |
| ADediting_152660 | chr1_97662457_- | intronic |
| ADediting_152661 | chr1_97662463_- | intronic |
| ADediting_152662 | chr1_97662465_- | intronic |
| ADediting_152663 | chr1_97662468_- | intronic |
| ADediting_152664 | chr1_97662474_- | intronic |
| ADediting_152665 | chr1_97662484_- | intronic |
| ADediting_152666 | chr1_97662485_- | intronic |
| ADediting_152667 | chr1_97662511_- | intronic |
| ADediting_152668 | chr1_97662521_- | intronic |
| ADediting_152669 | chr1_97662524_- | intronic |
| ADediting_152670 | chr1_97662533_- | intronic |
| ADediting_152671 | chr1_97662569_- | intronic |
| ADediting_152672 | chr1_97662570_- | intronic |
| ADediting_152673 | chr1_97662618_- | intronic |
| ADediting_152674 | chr1_97662627_- | intronic |
| ADediting_152737 | chr1_97730319_- | intronic |
| ADediting_152738 | chr1_97730320_- | intronic |
| ADediting_152739 | chr1_97730327_- | intronic |
| ADediting_152740 | chr1_97730386_- | intronic |
| ADediting_152741 | chr1_97730427_- | intronic |
| ADediting_152742 | chr1_97730428_- | intronic |
| ADediting_152743 | chr1_97732287_- | intronic |
| ADediting_152744 | chr1_97732308_- | intronic |
| ADediting_152745 | chr1_97732312_- | intronic |
| ADediting_152746 | chr1_97732351_- | intronic |
| ADediting_152747 | chr1_97732353_- | intronic |
| ADediting_152748 | chr1_97732363_- | intronic |
| ADediting_152749 | chr1_97732392_- | intronic |
| ADediting_152750 | chr1_97732393_- | intronic |
| ADediting_152766 | chr1_97823293_- | intronic |
| ADediting_152823 | chr1_97927989_- | intergenic |
| ADediting_152828 | chr1_97944110_- | ncRNA_intronic |
| ADediting_152829 | chr1_97944115_- | ncRNA_intronic |
| ADediting_152830 | chr1_97944129_- | ncRNA_intronic |
| ADediting_152831 | chr1_97944164_- | ncRNA_intronic |
| ADediting_152832 | chr1_97944197_- | ncRNA_intronic |
| ADediting_152834 | chr1_97944217_- | ncRNA_intronic |
| ADediting_152835 | chr1_97944286_- | ncRNA_intronic |
| ADediting_152836 | chr1_97944298_- | ncRNA_intronic |
| ADediting_152837 | chr1_97944302_- | ncRNA_intronic |
| ADediting_152838 | chr1_97944304_- | ncRNA_intronic |
| ADediting_152839 | chr1_97944305_- | ncRNA_intronic |
| ADediting_152840 | chr1_97944348_- | ncRNA_intronic |
| ADediting_152841 | chr1_97944349_- | ncRNA_intronic |
| ADediting_152849 | chr1_97946106_- | ncRNA_intronic |
| ADediting_152850 | chr1_97946175_- | ncRNA_intronic |
| ADediting_152851 | chr1_97946191_- | ncRNA_intronic |
| ADediting_152852 | chr1_97946203_- | ncRNA_intronic |
| ADediting_152853 | chr1_97946216_- | ncRNA_intronic |
| ADediting_152854 | chr1_97946220_- | ncRNA_intronic |
| ADediting_152855 | chr1_97946221_- | ncRNA_intronic |
| ADediting_152856 | chr1_97946227_- | ncRNA_intronic |
| ADediting_152857 | chr1_97946255_- | ncRNA_intronic |
| ADediting_152858 | chr1_97946258_- | ncRNA_intronic |
| ADediting_152859 | chr1_97946280_- | ncRNA_intronic |
| ADediting_152865 | chr1_97962033_- | ncRNA_intronic |
| ADediting_152866 | chr1_97962042_- | ncRNA_intronic |
| ADediting_152867 | chr1_97962073_- | ncRNA_intronic |
| ADediting_152868 | chr1_97962079_- | ncRNA_intronic |
| ADediting_152869 | chr1_97962110_- | ncRNA_intronic |
| ADediting_152870 | chr1_97962118_- | ncRNA_intronic |
| ADediting_152871 | chr1_97962121_- | ncRNA_intronic |
| ADediting_152872 | chr1_97962124_- | ncRNA_intronic |
| ADediting_152873 | chr1_97962152_- | ncRNA_intronic |
| ADediting_152874 | chr1_97962178_- | ncRNA_intronic |
| ADediting_152875 | chr1_97962181_- | ncRNA_intronic |
| ADediting_152876 | chr1_97962190_- | ncRNA_intronic |
| ADediting_152877 | chr1_97962205_- | ncRNA_intronic |
| ADediting_152878 | chr1_97962207_- | ncRNA_intronic |
| ADediting_152879 | chr1_97962214_- | ncRNA_intronic |
| ADediting_152880 | chr1_97962426_- | ncRNA_intronic |
| ADediting_152881 | chr1_97962461_- | ncRNA_intronic |
| ADediting_152882 | chr1_97962508_- | ncRNA_intronic |
| ADediting_152883 | chr1_97962512_- | ncRNA_intronic |
| ADediting_152884 | chr1_97962523_- | ncRNA_intronic |
| ADediting_152885 | chr1_97962525_- | ncRNA_intronic |
| ADediting_152886 | chr1_97962526_- | ncRNA_intronic |
| ADediting_152887 | chr1_97962533_- | ncRNA_intronic |
| ADediting_152888 | chr1_97962580_- | ncRNA_intronic |
| ADediting_152889 | chr1_97962585_- | ncRNA_intronic |
| ADediting_152890 | chr1_97962594_- | ncRNA_intronic |
| ADediting_152891 | chr1_97962602_- | ncRNA_intronic |
| ADediting_152892 | chr1_97962603_- | ncRNA_intronic |
| ADediting_152893 | chr1_97962630_- | ncRNA_intronic |
| ADediting_152896 | chr1_97969603_- | ncRNA_intronic |
| ADediting_152897 | chr1_97969715_- | ncRNA_intronic |
| ADediting_152898 | chr1_97969737_- | ncRNA_intronic |
| ADediting_152899 | chr1_97969754_- | ncRNA_intronic |
| ADediting_152902 | chr1_97983722_- | ncRNA_intronic |
| ADediting_152903 | chr1_97983730_- | ncRNA_intronic |
| ADediting_152904 | chr1_97985127_- | ncRNA_intronic |
| ADediting_152905 | chr1_97985211_- | ncRNA_intronic |
| ADediting_152907 | chr1_97989462_- | ncRNA_exonic |
| ADediting_152908 | chr1_97989472_- | ncRNA_exonic |
| ADediting_152909 | chr1_97989489_- | ncRNA_exonic |
| ADediting_152910 | chr1_97989490_- | ncRNA_exonic |
| ADediting_152911 | chr1_97989497_- | ncRNA_exonic |
| ADediting_152912 | chr1_97989510_- | ncRNA_exonic |
| ADediting_152913 | chr1_97989512_- | ncRNA_exonic |
| ADediting_152914 | chr1_97989533_- | ncRNA_exonic |
| ADediting_152915 | chr1_97989546_- | ncRNA_exonic |
| ADediting_152916 | chr1_97990364_- | ncRNA_intronic |
| ADediting_152917 | chr1_97990926_- | ncRNA_intronic |
| ADediting_152918 | chr1_97990927_- | ncRNA_intronic |
| ADediting_152919 | chr1_97990962_- | ncRNA_intronic |
| ADediting_152920 | chr1_97990963_- | ncRNA_intronic |
| ADediting_152921 | chr1_97990973_- | ncRNA_intronic |
| ADediting_152922 | chr1_97992270_- | ncRNA_intronic |
| ADediting_152923 | chr1_97994305_- | ncRNA_intronic |
| ADediting_152924 | chr1_97994315_- | ncRNA_intronic |
| ADediting_152925 | chr1_97994318_- | ncRNA_intronic |
| ADediting_152926 | chr1_97994325_- | ncRNA_intronic |
| ADediting_152927 | chr1_97994345_- | ncRNA_intronic |
| ADediting_152928 | chr1_97994359_- | ncRNA_intronic |
| ADediting_152929 | chr1_97994368_- | ncRNA_intronic |
| ADediting_152930 | chr1_97994380_- | ncRNA_intronic |
| ADediting_152931 | chr1_97994381_- | ncRNA_intronic |
| ADediting_152932 | chr1_97994391_- | ncRNA_intronic |
| ADediting_152933 | chr1_97994411_- | ncRNA_intronic |
| ADediting_152934 | chr1_97994415_- | ncRNA_intronic |
| ADediting_152935 | chr1_97994421_- | ncRNA_intronic |
| ADediting_152936 | chr1_97994429_- | ncRNA_intronic |
| ADediting_152937 | chr1_97994439_- | ncRNA_intronic |
| ADediting_152938 | chr1_97994466_- | ncRNA_intronic |
| ADediting_152939 | chr1_97994567_- | ncRNA_intronic |
| ADediting_1521929 | chr1_97730451_- | intronic |
| ADediting_1521930 | chr1_97730496_- | intronic |
| ADediting_1603300 | chr1_97331217_- | intronic |
| ADediting_1603301 | chr1_97356131_- | intronic |
| ADediting_1603302 | chr1_97356155_- | intronic |
| ADediting_1603303 | chr1_97445934_- | intronic |
| ADediting_1603304 | chr1_97448056_- | intronic |
| ADediting_1603305 | chr1_97448058_- | intronic |
| ADediting_1603306 | chr1_97470938_- | intronic |
| ADediting_1603307 | chr1_97471657_- | intronic |
| ADediting_1603308 | chr1_97471667_- | intronic |
| ADediting_1603309 | chr1_97548544_- | intronic |
| ADediting_1603310 | chr1_97548588_- | intronic |
| ADediting_1603311 | chr1_97548618_- | intronic |
| ADediting_1603312 | chr1_97548717_- | intronic |
| ADediting_1603313 | chr1_97549223_- | intronic |
| ADediting_1603314 | chr1_97549248_- | intronic |
| ADediting_1603315 | chr1_97549284_- | intronic |
| ADediting_1603316 | chr1_97585434_- | intronic |
| ADediting_1603317 | chr1_97585441_- | intronic |
| ADediting_1603318 | chr1_97585442_- | intronic |
| ADediting_1603319 | chr1_97585465_- | intronic |
| ADediting_1603320 | chr1_97585476_- | intronic |
| ADediting_1603321 | chr1_97587158_- | intronic |
| ADediting_1603322 | chr1_97587190_- | intronic |
| ADediting_1603323 | chr1_97587192_- | intronic |
| ADediting_1603324 | chr1_97587198_- | intronic |
| ADediting_1603325 | chr1_97587205_- | intronic |
| ADediting_1603326 | chr1_97587206_- | intronic |
| ADediting_1603327 | chr1_97587214_- | intronic |
| ADediting_1603328 | chr1_97587217_- | intronic |
| ADediting_1603329 | chr1_97587222_- | intronic |
| ADediting_1603330 | chr1_97587230_- | intronic |
| ADediting_1603331 | chr1_97587245_- | intronic |
| ADediting_1603332 | chr1_97627150_- | intronic |
| ADediting_1603333 | chr1_97662114_- | intronic |
| ADediting_1603334 | chr1_97662133_- | intronic |
| ADediting_1603335 | chr1_97662168_- | intronic |
| ADediting_1603336 | chr1_97662170_- | intronic |
| ADediting_1603337 | chr1_97662509_- | intronic |
| ADediting_1603338 | chr1_97730362_- | intronic |
| ADediting_1603339 | chr1_97732295_- | intronic |
| ADediting_1603340 | chr1_97732309_- | intronic |
| ADediting_1603343 | chr1_97881130_- | intronic |
| ADediting_1603344 | chr1_97887387_- | intronic |
| ADediting_1603345 | chr1_97916803_- | intronic |
| ADediting_1603349 | chr1_97946239_- | ncRNA_intronic |
| ADediting_1603350 | chr1_97946240_- | ncRNA_intronic |
| ADediting_1603351 | chr1_97962142_- | ncRNA_intronic |
| ADediting_1603352 | chr1_97962168_- | ncRNA_intronic |
| ADediting_1603353 | chr1_97962251_- | ncRNA_intronic |
| ADediting_1603354 | chr1_97962496_- | ncRNA_intronic |
| ADediting_1603355 | chr1_97962626_- | ncRNA_intronic |
| ADediting_1603356 | chr1_97994354_- | ncRNA_intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_152301 | chr1_97333617_- | SINE | Alu | Name=AluY |
| ADediting_152302 | chr1_97333618_- | SINE | Alu | Name=AluY |
| ADediting_152303 | chr1_97333658_- | SINE | Alu | Name=AluY |
| ADediting_152304 | chr1_97333659_- | SINE | Alu | Name=AluY |
| ADediting_152329 | chr1_97405584_- | SINE | Alu | Name=AluSz |
| ADediting_152330 | chr1_97405601_- | SINE | Alu | Name=AluSz |
| ADediting_152342 | chr1_97440019_- | SINE | Alu | Name=AluSp |
| ADediting_152343 | chr1_97440153_- | SINE | Alu | Name=AluSp |
| ADediting_152344 | chr1_97445818_- | SINE | Alu | Name=AluSq |
| ADediting_152431 | chr1_97484102_- | SINE | Alu | Name=AluSx |
| ADediting_152432 | chr1_97484139_- | SINE | Alu | Name=AluSx |
| ADediting_152433 | chr1_97484220_- | SINE | Alu | Name=AluSx |
| ADediting_152434 | chr1_97485270_- | SINE | Alu | Name=AluSz6 |
| ADediting_152444 | chr1_97487484_- | SINE | Alu | Name=AluY |
| ADediting_152470 | chr1_97522529_- | SINE | Alu | Name=AluYa5 |
| ADediting_152471 | chr1_97522533_- | SINE | Alu | Name=AluYa5 |
| ADediting_152472 | chr1_97522610_- | SINE | Alu | Name=AluYa5 |
| ADediting_152473 | chr1_97522611_- | SINE | Alu | Name=AluYa5 |
| ADediting_152474 | chr1_97522619_- | SINE | Alu | Name=AluYa5 |
| ADediting_152525 | chr1_97549112_- | SINE | Alu | Name=AluJo |
| ADediting_152526 | chr1_97549139_- | SINE | Alu | Name=AluJo |
| ADediting_152527 | chr1_97549140_- | SINE | Alu | Name=AluJo |
| ADediting_152528 | chr1_97549202_- | SINE | Alu | Name=AluJo |
| ADediting_152529 | chr1_97549231_- | SINE | Alu | Name=AluJo |
| ADediting_152530 | chr1_97549285_- | SINE | Alu | Name=AluJo |
| ADediting_152646 | chr1_97657228_- | SINE | Alu | Name=AluSx |
| ADediting_152648 | chr1_97662090_- | SINE | Alu | Name=AluY |
| ADediting_152649 | chr1_97662097_- | SINE | Alu | Name=AluY |
| ADediting_152650 | chr1_97662139_- | SINE | Alu | Name=AluY |
| ADediting_152651 | chr1_97662165_- | SINE | Alu | Name=AluY |
| ADediting_152652 | chr1_97662172_- | SINE | Alu | Name=AluY |
| ADediting_152653 | chr1_97662181_- | SINE | Alu | Name=AluY |
| ADediting_152654 | chr1_97662184_- | SINE | Alu | Name=AluY |
| ADediting_152655 | chr1_97662195_- | SINE | Alu | Name=AluY |
| ADediting_152656 | chr1_97662205_- | SINE | Alu | Name=AluY |
| ADediting_152657 | chr1_97662258_- | SINE | Alu | Name=AluY |
| ADediting_152658 | chr1_97662398_- | SINE | Alu | Name=AluSc8 |
| ADediting_152659 | chr1_97662419_- | SINE | Alu | Name=AluSc8 |
| ADediting_152660 | chr1_97662457_- | SINE | Alu | Name=AluSc8 |
| ADediting_152661 | chr1_97662463_- | SINE | Alu | Name=AluSc8 |
| ADediting_152662 | chr1_97662465_- | SINE | Alu | Name=AluSc8 |
| ADediting_152663 | chr1_97662468_- | SINE | Alu | Name=AluSc8 |
| ADediting_152664 | chr1_97662474_- | SINE | Alu | Name=AluSc8 |
| ADediting_152665 | chr1_97662484_- | SINE | Alu | Name=AluSc8 |
| ADediting_152666 | chr1_97662485_- | SINE | Alu | Name=AluSc8 |
| ADediting_152667 | chr1_97662511_- | SINE | Alu | Name=AluSc8 |
| ADediting_152668 | chr1_97662521_- | SINE | Alu | Name=AluSc8 |
| ADediting_152669 | chr1_97662524_- | SINE | Alu | Name=AluSc8 |
| ADediting_152670 | chr1_97662533_- | SINE | Alu | Name=AluSc8 |
| ADediting_152671 | chr1_97662569_- | SINE | Alu | Name=AluSc8 |
| ADediting_152672 | chr1_97662570_- | SINE | Alu | Name=AluSc8 |
| ADediting_152673 | chr1_97662618_- | SINE | Alu | Name=AluSc8 |
| ADediting_152674 | chr1_97662627_- | SINE | Alu | Name=AluSc8 |
| ADediting_152737 | chr1_97730319_- | SINE | Alu | Name=AluSz |
| ADediting_152738 | chr1_97730320_- | SINE | Alu | Name=AluSz |
| ADediting_152739 | chr1_97730327_- | SINE | Alu | Name=AluSz |
| ADediting_152740 | chr1_97730386_- | SINE | Alu | Name=AluSz |
| ADediting_152741 | chr1_97730427_- | SINE | Alu | Name=AluSz |
| ADediting_152742 | chr1_97730428_- | SINE | Alu | Name=AluSz |
| ADediting_152743 | chr1_97732287_- | SINE | Alu | Name=AluSc8 |
| ADediting_152744 | chr1_97732308_- | SINE | Alu | Name=AluSc8 |
| ADediting_152745 | chr1_97732312_- | SINE | Alu | Name=AluSc8 |
| ADediting_152746 | chr1_97732351_- | SINE | Alu | Name=AluSc8 |
| ADediting_152747 | chr1_97732353_- | SINE | Alu | Name=AluSc8 |
| ADediting_152748 | chr1_97732363_- | SINE | Alu | Name=AluSc8 |
| ADediting_152749 | chr1_97732392_- | SINE | Alu | Name=AluSc8 |
| ADediting_152750 | chr1_97732393_- | SINE | Alu | Name=AluSc8 |
| ADediting_152766 | chr1_97823293_- | SINE | Alu | Name=AluY |
| ADediting_152823 | chr1_97927989_- | SINE | Alu | Name=AluSc |
| ADediting_152828 | chr1_97944110_- | SINE | Alu | Name=AluSc |
| ADediting_152829 | chr1_97944115_- | SINE | Alu | Name=AluSc |
| ADediting_152830 | chr1_97944129_- | SINE | Alu | Name=AluSc |
| ADediting_152831 | chr1_97944164_- | SINE | Alu | Name=AluSc |
| ADediting_152832 | chr1_97944197_- | SINE | Alu | Name=AluSc |
| ADediting_152834 | chr1_97944217_- | SINE | Alu | Name=AluSc |
| ADediting_152835 | chr1_97944286_- | SINE | Alu | Name=AluSc |
| ADediting_152836 | chr1_97944298_- | SINE | Alu | Name=AluSc |
| ADediting_152837 | chr1_97944302_- | SINE | Alu | Name=AluSc |
| ADediting_152838 | chr1_97944304_- | SINE | Alu | Name=AluSc |
| ADediting_152839 | chr1_97944305_- | SINE | Alu | Name=AluSc |
| ADediting_152840 | chr1_97944348_- | SINE | Alu | Name=AluSc |
| ADediting_152841 | chr1_97944349_- | SINE | Alu | Name=AluSc |
| ADediting_152849 | chr1_97946106_- | SINE | Alu | Name=AluSz |
| ADediting_152850 | chr1_97946175_- | SINE | Alu | Name=AluSz |
| ADediting_152851 | chr1_97946191_- | SINE | Alu | Name=AluSz |
| ADediting_152852 | chr1_97946203_- | SINE | Alu | Name=AluSz |
| ADediting_152853 | chr1_97946216_- | SINE | Alu | Name=AluSz |
| ADediting_152854 | chr1_97946220_- | SINE | Alu | Name=AluSz |
| ADediting_152855 | chr1_97946221_- | SINE | Alu | Name=AluSz |
| ADediting_152856 | chr1_97946227_- | SINE | Alu | Name=AluSz |
| ADediting_152857 | chr1_97946255_- | SINE | Alu | Name=AluSz |
| ADediting_152858 | chr1_97946258_- | SINE | Alu | Name=AluSz |
| ADediting_152859 | chr1_97946280_- | SINE | Alu | Name=AluSz |
| ADediting_152865 | chr1_97962033_- | SINE | Alu | Name=AluSx |
| ADediting_152866 | chr1_97962042_- | SINE | Alu | Name=AluSx |
| ADediting_152867 | chr1_97962073_- | SINE | Alu | Name=AluSx |
| ADediting_152868 | chr1_97962079_- | SINE | Alu | Name=AluSx |
| ADediting_152869 | chr1_97962110_- | SINE | Alu | Name=AluSx |
| ADediting_152870 | chr1_97962118_- | SINE | Alu | Name=AluSx |
| ADediting_152871 | chr1_97962121_- | SINE | Alu | Name=AluSx |
| ADediting_152872 | chr1_97962124_- | SINE | Alu | Name=AluSx |
| ADediting_152873 | chr1_97962152_- | SINE | Alu | Name=AluSx |
| ADediting_152874 | chr1_97962178_- | SINE | Alu | Name=AluSx |
| ADediting_152875 | chr1_97962181_- | SINE | Alu | Name=AluSx |
| ADediting_152876 | chr1_97962190_- | SINE | Alu | Name=AluSx |
| ADediting_152877 | chr1_97962205_- | SINE | Alu | Name=AluSx |
| ADediting_152878 | chr1_97962207_- | SINE | Alu | Name=AluSx |
| ADediting_152879 | chr1_97962214_- | SINE | Alu | Name=AluSx |
| ADediting_152880 | chr1_97962426_- | SINE | Alu | Name=AluJb |
| ADediting_152881 | chr1_97962461_- | SINE | Alu | Name=AluJb |
| ADediting_152882 | chr1_97962508_- | SINE | Alu | Name=AluJb |
| ADediting_152883 | chr1_97962512_- | SINE | Alu | Name=AluJb |
| ADediting_152884 | chr1_97962523_- | SINE | Alu | Name=AluJb |
| ADediting_152885 | chr1_97962525_- | SINE | Alu | Name=AluJb |
| ADediting_152886 | chr1_97962526_- | SINE | Alu | Name=AluJb |
| ADediting_152887 | chr1_97962533_- | SINE | Alu | Name=AluJb |
| ADediting_152888 | chr1_97962580_- | SINE | Alu | Name=AluJb |
| ADediting_152889 | chr1_97962585_- | SINE | Alu | Name=AluJb |
| ADediting_152890 | chr1_97962594_- | SINE | Alu | Name=AluJb |
| ADediting_152891 | chr1_97962602_- | SINE | Alu | Name=AluJb |
| ADediting_152892 | chr1_97962603_- | SINE | Alu | Name=AluJb |
| ADediting_152896 | chr1_97969603_- | SINE | Alu | Name=AluSc8 |
| ADediting_152897 | chr1_97969715_- | SINE | Alu | Name=AluSc8 |
| ADediting_152898 | chr1_97969737_- | SINE | Alu | Name=AluSc8 |
| ADediting_152899 | chr1_97969754_- | SINE | Alu | Name=AluSc8 |
| ADediting_152902 | chr1_97983722_- | SINE | Alu | Name=AluYc |
| ADediting_152903 | chr1_97983730_- | SINE | Alu | Name=AluYc |
| ADediting_152904 | chr1_97985127_- | SINE | Alu | Name=AluJb |
| ADediting_152905 | chr1_97985211_- | SINE | Alu | Name=AluJb |
| ADediting_152907 | chr1_97989462_- | SINE | Alu | Name=AluSp |
| ADediting_152908 | chr1_97989472_- | SINE | Alu | Name=AluSp |
| ADediting_152909 | chr1_97989489_- | SINE | Alu | Name=AluSp |
| ADediting_152910 | chr1_97989490_- | SINE | Alu | Name=AluSp |
| ADediting_152911 | chr1_97989497_- | SINE | Alu | Name=AluSp |
| ADediting_152912 | chr1_97989510_- | SINE | Alu | Name=AluSp |
| ADediting_152913 | chr1_97989512_- | SINE | Alu | Name=AluSp |
| ADediting_152914 | chr1_97989533_- | SINE | Alu | Name=AluSp |
| ADediting_152915 | chr1_97989546_- | SINE | Alu | Name=AluSp |
| ADediting_152916 | chr1_97990364_- | LINE | L1 | Name=L1PA13 |
| ADediting_152917 | chr1_97990926_- | SINE | Alu | Name=AluY |
| ADediting_152918 | chr1_97990927_- | SINE | Alu | Name=AluY |
| ADediting_152919 | chr1_97990962_- | SINE | Alu | Name=AluY |
| ADediting_152920 | chr1_97990963_- | SINE | Alu | Name=AluY |
| ADediting_152921 | chr1_97990973_- | SINE | Alu | Name=AluY |
| ADediting_152922 | chr1_97992270_- | LINE | L1 | Name=L1MEd |
| ADediting_152923 | chr1_97994305_- | SINE | Alu | Name=AluSx |
| ADediting_152924 | chr1_97994315_- | SINE | Alu | Name=AluSx |
| ADediting_152925 | chr1_97994318_- | SINE | Alu | Name=AluSx |
| ADediting_152926 | chr1_97994325_- | SINE | Alu | Name=AluSx |
| ADediting_152927 | chr1_97994345_- | SINE | Alu | Name=AluSx |
| ADediting_152928 | chr1_97994359_- | SINE | Alu | Name=AluSx |
| ADediting_152929 | chr1_97994368_- | SINE | Alu | Name=AluSx |
| ADediting_152930 | chr1_97994380_- | SINE | Alu | Name=AluSx |
| ADediting_152931 | chr1_97994381_- | SINE | Alu | Name=AluSx |
| ADediting_152932 | chr1_97994391_- | SINE | Alu | Name=AluSx |
| ADediting_152933 | chr1_97994411_- | SINE | Alu | Name=AluSx |
| ADediting_152934 | chr1_97994415_- | SINE | Alu | Name=AluSx |
| ADediting_152935 | chr1_97994421_- | SINE | Alu | Name=AluSx |
| ADediting_152936 | chr1_97994429_- | SINE | Alu | Name=AluSx |
| ADediting_152937 | chr1_97994439_- | SINE | Alu | Name=AluSx |
| ADediting_152938 | chr1_97994466_- | SINE | Alu | Name=AluSx |
| ADediting_152939 | chr1_97994567_- | SINE | Alu | Name=AluSx |
| ADediting_1521929 | chr1_97730451_- | SINE | Alu | Name=AluSz |
| ADediting_1521930 | chr1_97730496_- | SINE | Alu | Name=AluSz |
| ADediting_1603300 | chr1_97331217_- | SINE | Alu | Name=AluJr4 |
| ADediting_1603301 | chr1_97356131_- | LINE | L1 | Name=L1MA7 |
| ADediting_1603302 | chr1_97356155_- | LINE | L1 | Name=L1MA7 |
| ADediting_1603303 | chr1_97445934_- | SINE | Alu | Name=AluSq |
| ADediting_1603304 | chr1_97448056_- | SINE | Alu | Name=AluJo |
| ADediting_1603305 | chr1_97448058_- | SINE | Alu | Name=AluJo |
| ADediting_1603306 | chr1_97470938_- | SINE | Alu | Name=AluSq |
| ADediting_1603307 | chr1_97471657_- | SINE | Alu | Name=AluSx1 |
| ADediting_1603308 | chr1_97471667_- | SINE | Alu | Name=AluSx1 |
| ADediting_1603309 | chr1_97548544_- | SINE | Alu | Name=AluSz6 |
| ADediting_1603310 | chr1_97548588_- | SINE | Alu | Name=AluSz6 |
| ADediting_1603311 | chr1_97548618_- | SINE | Alu | Name=AluSz6 |
| ADediting_1603312 | chr1_97548717_- | SINE | Alu | Name=AluSz6 |
| ADediting_1603313 | chr1_97549223_- | SINE | Alu | Name=AluJo |
| ADediting_1603314 | chr1_97549248_- | SINE | Alu | Name=AluJo |
| ADediting_1603315 | chr1_97549284_- | SINE | Alu | Name=AluJo |
| ADediting_1603332 | chr1_97627150_- | LTR | ERVL-MaLR | Name=MLT1A0 |
| ADediting_1603333 | chr1_97662114_- | SINE | Alu | Name=AluY |
| ADediting_1603334 | chr1_97662133_- | SINE | Alu | Name=AluY |
| ADediting_1603335 | chr1_97662168_- | SINE | Alu | Name=AluY |
| ADediting_1603336 | chr1_97662170_- | SINE | Alu | Name=AluY |
| ADediting_1603337 | chr1_97662509_- | SINE | Alu | Name=AluSc8 |
| ADediting_1603338 | chr1_97730362_- | SINE | Alu | Name=AluSz |
| ADediting_1603339 | chr1_97732295_- | SINE | Alu | Name=AluSc8 |
| ADediting_1603340 | chr1_97732309_- | SINE | Alu | Name=AluSc8 |
| ADediting_1603343 | chr1_97881130_- | LTR | ERVL-MaLR | Name=MLT1B |
| ADediting_1603344 | chr1_97887387_- | SINE | Alu | Name=AluJb |
| ADediting_1603345 | chr1_97916803_- | SINE | Alu | Name=AluJo |
| ADediting_1603349 | chr1_97946239_- | SINE | Alu | Name=AluSz |
| ADediting_1603350 | chr1_97946240_- | SINE | Alu | Name=AluSz |
| ADediting_1603351 | chr1_97962142_- | SINE | Alu | Name=AluSx |
| ADediting_1603352 | chr1_97962168_- | SINE | Alu | Name=AluSx |
| ADediting_1603353 | chr1_97962251_- | SINE | Alu | Name=AluSx |
| ADediting_1603354 | chr1_97962496_- | SINE | Alu | Name=AluJb |
| ADediting_1603355 | chr1_97962626_- | SINE | Alu | Name=AluJb |
| ADediting_1603356 | chr1_97994354_- | SINE | Alu | Name=AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for DPYD |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for DPYD |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for DPYD |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for DPYD |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000188641.13 | ENST00000306031.5 | DPYD-201 | hsa-miR-4477b | chr1 | 97720622 | 97720628 | 7mer-m8 | 97720621 | 97720642 | 153 | -13.31 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-381-3p | chr1 | 97077784 | 97077790 | 7mer-m8 | 97077783 | 97077804 | 140 | -15.8 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-641 | chr1 | 97078810 | 97078817 | 8mer-1a | 97078810 | 97078833 | 149 | -10.53 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000188641.13 | ENST00000306031.5 | DPYD-201 | hsa-miR-641 | chr1 | 97719773 | 97719779 | 7mer-m8 | 97719772 | 97719795 | 140 | -11.2 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-4775 | chr1 | 97078911 | 97078917 | 7mer-m8 | 97078910 | 97078931 | 140 | -9.72 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-5585-3p | chr1 | 97078315 | 97078321 | 7mer-m8 | 97078314 | 97078334 | 143 | -12.32 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-5585-3p | chr1 | 97078322 | 97078328 | 7mer-m8 | 97078321 | 97078342 | 140 | -10.34 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-5585-3p | chr1 | 97078793 | 97078800 | 8mer-1a | 97078793 | 97078815 | 143 | -14.26 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_843620 | chr2_207754818_+ | ENSG00000188641.13 | ENST00000370192.7 | DPYD-202 | hsa-miR-4775 | chr1 | 97078532 | 97078538 | 7mer-m8 | 97078531 | 97078552 | 148 | -2.07 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for DPYD |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for DPYD |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_152648 | chr1_97662090_- | 0.796215228042264 | -0.0147262168611172 | 0.0580141207044852 | -0.107783927802834 | 4.68940753048409e-11 | 0.362427024971178 |
| DLPFC | ADediting_152662 | chr1_97662465_- | 0.210388668928692 | -0.0713345911343326 | 0.00357654104824955 | -0.164994218926893 | 4.83964302720792e-11 | 0.362186465012616 |
| DLPFC | ADediting_152663 | chr1_97662468_- | 0.338384131478613 | -0.0545544408991238 | 0.019158061428081 | -0.132987491481299 | 1.58572648208376e-09 | 0.334229807379523 |
| DLPFC | ADediting_152670 | chr1_97662533_- | 0.714019318193286 | -0.0208958639143609 | 0.022340093550289 | -0.129728185437368 | 1.33444914487116e-13 | 0.404017957079194 |
| STG | ADediting_152865 | chr1_97962033_- | 3.86293074639827e-05 | 0.433160597077103 | 0.000140909709778837 | 0.40356671432236 | 0.988492701653827 | 0.00159758950990476 |
| STG | ADediting_152866 | chr1_97962042_- | 6.82623674884977e-06 | 0.468927023331487 | 2.75806531875331e-05 | 0.440433911617651 | 0.729853221727392 | 0.0382367376460351 |
| DLPFC | ADediting_152878 | chr1_97962207_- | 0.842337851844317 | 0.0113424445683869 | 0.27612689419301 | -0.0620455568218204 | 1.56214432580803e-08 | 0.31425621275208 |
| STG | ADediting_152889 | chr1_97962585_- | 0.00350768790430646 | 0.315091605315879 | 0.00201692989013673 | 0.332251342949096 | 0.700569208662861 | -0.0425770184566512 |
| STG | ADediting_152891 | chr1_97962602_- | 0.00306544615413846 | 0.319361592923082 | 0.013520031275412 | 0.268528405689336 | 0.505714257039947 | -0.0736192878598308 |
| STG | ADediting_152893 | chr1_97962630_- | 0.000132994792764973 | 0.404949232491836 | 6.48815700773541e-05 | 0.421630718748856 | 0.589560105445226 | -0.0597034360745384 |
| TCX | ADediting_152909 | chr1_97989489_- | 0.000271360129215113 | 0.293195223812636 | 2.87422699407078e-06 | 0.371435873467482 | 0.0180316885908819 | -0.192895245030987 |
| FP | ADediting_152909 | chr1_97989489_- | 2.83792519457283e-05 | 0.308257923328553 | 0.0272477614631475 | 0.165515780420116 | 0.0251179757797907 | 0.167853640795782 |
| STG | ADediting_152909 | chr1_97989489_- | 0.00346104573477277 | 0.315518488486178 | 0.00100217390637367 | 0.352637816951662 | 0.68710265606453 | -0.0445943219763021 |
| TCX | ADediting_152910 | chr1_97989490_- | 0.000233350471973732 | 0.296168384725699 | 5.70693542398113e-06 | 0.360898243944794 | 0.0470442428942377 | -0.162428541895034 |
| STG | ADediting_152910 | chr1_97989490_- | 0.000377443494482489 | 0.379022040053418 | 5.79401094027038e-05 | 0.424182506624361 | 0.704385174495346 | 0.0420079272947451 |
| TCX | ADediting_152913 | chr1_97989512_- | 0.00129931668159443 | 0.260233401580106 | 2.596299816973e-05 | 0.336200918994964 | 0.205374107686162 | -0.103989510772198 |
| FP | ADediting_152913 | chr1_97989512_- | 1.13569172684242e-06 | 0.355293640439875 | 9.20220464624049e-05 | 0.288881699158702 | 0.031494216755862 | 0.161286519027695 |
| STG | ADediting_152913 | chr1_97989512_- | 0.0121161509989863 | 0.272605527148574 | 0.00134425066621902 | 0.344242678622176 | 0.937668666979571 | -0.00866199178709909 |
| STG | ADediting_152914 | chr1_97989533_- | 0.0111236029637015 | 0.275743890035117 | 0.0018347283534112 | 0.335092046599351 | 0.571105614246569 | -0.0626802930823732 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.02337480321726e-15 | 0.42809103175248 | 8.63929077563569e-06 | 0.249665040674506 | 0.706231141075309 | 0.0214921138546479 |
| AC | 3.17819261289649e-37 | 0.693817669589521 | 2.76780358907887e-19 | 0.527185686122697 | 9.07891820642222e-20 | 0.533219259104527 |
| PCC | 9.51693218991615e-16 | 0.538388779699499 | 2.70039279015844e-11 | 0.458013964880337 | 5.42365919723724e-10 | 0.429893694140774 |
| CER | 5.59098994502623e-07 | 0.395190052376136 | 0.0140146798503866 | 0.20024300675726 | 5.47863986817955e-09 | 0.453783439335419 |
| TCX | 3.70618721896552e-10 | 0.483408424532255 | 0.357075019848978 | -0.0757209042574051 | 7.55511794422966e-21 | 0.669483115921644 |
| FP | 1.97887845940915e-20 | 0.621850710893234 | 4.97526858198475e-27 | 0.695217683139628 | 0.000694014333603853 | 0.251898580265254 |
| IFG | 0.0209772053011329 | 0.459072063053066 | 0.183752860603707 | 0.274773770606472 | 0.00031028202206233 | 0.662278689582285 |
| PG | 9.99265132719591e-44 | 0.805769137870709 | 1.09280054319991e-23 | 0.64974748148994 | 0.353303562239136 | 0.0684404998136273 |
| STG | 4.32683234900244e-12 | 0.666925197180964 | 8.47928242402377e-07 | 0.507233066587888 | 0.00824152212869236 | 0.286490531309387 |
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Relation with AD stages for DPYD |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_152850 | chr1_97946175_- | 0.0354713369979928 | 0.422303326441651 |
| IFG | ADediting_152868 | chr1_97962079_- | 0.0354713369979928 | 0.422303326441651 |
| IFG | ADediting_152870 | chr1_97962118_- | 0.0113059937049014 | 0.497952103823781 |
| PG | ADediting_152869 | chr1_97962110_- | 3.71979899693599e-06 | -0.331804822588721 |
| PG | ADediting_152871 | chr1_97962121_- | 1.809379875772e-05 | -0.308720890187399 |
| PG | ADediting_152880 | chr1_97962426_- | 7.24759257750614e-06 | -0.322302080902335 |
| STG | ADediting_152890 | chr1_97962594_- | 0.00382908072643972 | -0.31228072267239 |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000306755541474437 | 0.34083294302277 |
| TCX | 1.02471770277005e-09 | 0.549909818530127 |
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RelatedDrugs for DPYD |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DPYD |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| DPYD | C1959620 | Dihydropyrimidine Dehydrogenase Deficiency | 6 | CTD_human;ORPHANET;UNIPROT |
| DPYD | C0009402 | Colorectal Carcinoma | 5 | CTD_human |
| DPYD | C0009404 | Colorectal Neoplasms | 5 | CTD_human |
| DPYD | C1527249 | Colorectal Cancer | 5 | CTD_human |
| DPYD | C0274576 | Poisoning by fluorouracil | 4 | ORPHANET;UNIPROT |
| DPYD | C0024623 | Malignant neoplasm of stomach | 3 | CTD_human |
| DPYD | C0038356 | Stomach Neoplasms | 3 | CTD_human |
| DPYD | C1708349 | Hereditary Diffuse Gastric Cancer | 3 | CTD_human |
| DPYD | C0030297 | Pancreatic Neoplasm | 2 | CTD_human |
| DPYD | C0034139 | Purine-Pyrimidine Metabolism, Inborn Errors | 2 | CTD_human |
| DPYD | C0036341 | Schizophrenia | 2 | CTD_human |
| DPYD | C0346647 | Malignant neoplasm of pancreas | 2 | CTD_human |
| DPYD | C1510586 | Autism Spectrum Disorders | 2 | CTD_human |
| DPYD | C3495551 | Dihydropyrimidinuria | 2 | CTD_human |
| DPYD | C0004352 | Autistic Disorder | 1 | CTD_human |
| DPYD | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
| DPYD | C0007102 | Malignant tumor of colon | 1 | CTD_human |
| DPYD | C0009375 | Colonic Neoplasms | 1 | CTD_human |
| DPYD | C0018671 | Head and Neck Neoplasms | 1 | CTD_human |
| DPYD | C0018675 | Head Neoplasms | 1 | CTD_human |
| DPYD | C0023012 | Language Delay | 1 | CTD_human |
| DPYD | C0023014 | Language Development Disorders | 1 | CTD_human |
| DPYD | C0024121 | Lung Neoplasms | 1 | CTD_human |
| DPYD | C0027533 | Neck Neoplasms | 1 | CTD_human |
| DPYD | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
| DPYD | C0027765 | nervous system disorder | 1 | CTD_human |
| DPYD | C0027947 | Neutropenia | 1 | CTD_human |
| DPYD | C0028754 | Obesity | 1 | CTD_human |
| DPYD | C0031117 | Peripheral Neuropathy | 1 | CTD_human |
| DPYD | C0241210 | Speech Delay | 1 | CTD_human |
| DPYD | C0242379 | Malignant neoplasm of lung | 1 | CTD_human |
| DPYD | C0270612 | Leukoencephalopathies | 1 | CTD_human |
| DPYD | C0278996 | Malignant Head and Neck Neoplasm | 1 | CTD_human |
| DPYD | C0454655 | Semantic-Pragmatic Disorder | 1 | CTD_human |
| DPYD | C0678222 | Breast Carcinoma | 1 | CTD_human |
| DPYD | C0746787 | Cancer of Neck | 1 | CTD_human |
| DPYD | C0751177 | Cancer of Head | 1 | CTD_human |
| DPYD | C0751257 | Auditory Processing Disorder, Central | 1 | CTD_human |
| DPYD | C0887900 | Upper Aerodigestive Tract Neoplasms | 1 | CTD_human |
| DPYD | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
| DPYD | C1458155 | Mammary Neoplasms | 1 | CTD_human |
| DPYD | C1858991 | Childhood Ataxia with Central Nervous System Hypomyelinization | 1 | CTD_human |
| DPYD | C2239176 | Liver carcinoma | 1 | CTD_human |