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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for USP32P1 |
 Gene summary |
| Gene information | Gene symbol | USP32P1 | Gene ID | 162632 |
| Gene name | ubiquitin specific peptidase 32 pseudogene 1 | |
| Synonyms | - | |
| Cytomap | 17p11.2 | |
| Type of gene | pseudo | |
| Description | Protein TL13-likeProtein USP6-like 2TL132 pseudogeneubiquitin specific peptidase 6 (Tre-2 oncogene) pseudogene | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for USP32P1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_589415(16790615, +), ADediting_589416(16790617, +), ADediting_589417(16790618, +), ADediting_589418(16790631, +), ADediting_589419(16790653, +), ADediting_589420(16790656, +), ADediting_589421(16790672, +), ADediting_589422(16790677, +), ADediting_589423(16790678, +), ADediting_589424(16790691, +), ADediting_589425(16790692, +), ADediting_589426(16790704, +), ADediting_589427(16790721, +), ADediting_589428(16790734, +), ADediting_589429(16790736, +), ADediting_589430(16790740, +), ADediting_589431(16790779, +), ADediting_589432(16790782, +), ADediting_589433(16790785, +), ADediting_589434(16790786, +), ADediting_589435(16790789, +), ADediting_589436(16790799, +), ADediting_589437(16790801, +), ADediting_589438(16790917, +), ADediting_589439(16790937, +), ADediting_589440(16790952, +), ADediting_589441(16790954, +), ADediting_589442(16790961, +), ADediting_589443(16790962, +), ADediting_589444(16790978, +), ADediting_589445(16790979, +), ADediting_589446(16790982, +), ADediting_589447(16791011, +), ADediting_589448(16791058, +), ADediting_589449(16791340, +), ADediting_589450(16791358, +), ADediting_589451(16791364, +), ADediting_589452(16791377, +), ADediting_589453(16791384, +), ADediting_589454(16791387, +), ADediting_589455(16791388, +), ADediting_589456(16791409, +), ADediting_589457(16791410, +), ADediting_589458(16791413, +), ADediting_589459(16791433, +), ADediting_589460(16791441, +), ADediting_589461(16791456, +), ADediting_589462(16791462, +), ADediting_589463(16791465, +), ADediting_589464(16791504, +), ADediting_589465(16792730, +), ADediting_589466(16792733, +), ADediting_589467(16792740, +), ADediting_589468(16792761, +), ADediting_589469(16792764, +), ADediting_589470(16792781, +), ADediting_589471(16792788, +), ADediting_589472(16793547, +), ADediting_589473(16793575, +), ADediting_589474(16793610, +), ADediting_589475(16793615, +), ADediting_589476(16793616, +), ADediting_589477(16795651, +), ADediting_589478(16795775, +), ADediting_589479(16795807, +), ADediting_589480(16795849, +), ADediting_589481(16795867, +), ADediting_589482(16804373, +), ADediting_589483(16804374, +), ADediting_589484(16804402, +), ADediting_589485(16804410, +), ADediting_1545441(16790696, +), ADediting_1545442(16790731, +), ADediting_1545443(16790750, +), ADediting_1545444(16791072, +), ADediting_1545445(16792724, +), ADediting_1545446(16792738, +), ADediting_1545447(16792745, +), ADediting_1545448(16792769, +), ADediting_1545449(16795769, +), ADediting_1626016(16792737, +), |
Top |
RNA editing positional annotations for USP32P1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_589415 | chr17_16790615_+ | ncRNA_intronic |
| ADediting_589416 | chr17_16790617_+ | ncRNA_intronic |
| ADediting_589417 | chr17_16790618_+ | ncRNA_intronic |
| ADediting_589418 | chr17_16790631_+ | ncRNA_intronic |
| ADediting_589419 | chr17_16790653_+ | ncRNA_intronic |
| ADediting_589420 | chr17_16790656_+ | ncRNA_intronic |
| ADediting_589421 | chr17_16790672_+ | ncRNA_intronic |
| ADediting_589422 | chr17_16790677_+ | ncRNA_intronic |
| ADediting_589423 | chr17_16790678_+ | ncRNA_intronic |
| ADediting_589424 | chr17_16790691_+ | ncRNA_intronic |
| ADediting_589425 | chr17_16790692_+ | ncRNA_intronic |
| ADediting_589426 | chr17_16790704_+ | ncRNA_intronic |
| ADediting_589427 | chr17_16790721_+ | ncRNA_intronic |
| ADediting_589428 | chr17_16790734_+ | ncRNA_intronic |
| ADediting_589429 | chr17_16790736_+ | ncRNA_intronic |
| ADediting_589430 | chr17_16790740_+ | ncRNA_intronic |
| ADediting_589431 | chr17_16790779_+ | ncRNA_intronic |
| ADediting_589432 | chr17_16790782_+ | ncRNA_intronic |
| ADediting_589433 | chr17_16790785_+ | ncRNA_intronic |
| ADediting_589434 | chr17_16790786_+ | ncRNA_intronic |
| ADediting_589435 | chr17_16790789_+ | ncRNA_intronic |
| ADediting_589436 | chr17_16790799_+ | ncRNA_intronic |
| ADediting_589437 | chr17_16790801_+ | ncRNA_intronic |
| ADediting_589438 | chr17_16790917_+ | ncRNA_intronic |
| ADediting_589439 | chr17_16790937_+ | ncRNA_intronic |
| ADediting_589440 | chr17_16790952_+ | ncRNA_intronic |
| ADediting_589441 | chr17_16790954_+ | ncRNA_intronic |
| ADediting_589442 | chr17_16790961_+ | ncRNA_intronic |
| ADediting_589443 | chr17_16790962_+ | ncRNA_intronic |
| ADediting_589444 | chr17_16790978_+ | ncRNA_intronic |
| ADediting_589445 | chr17_16790979_+ | ncRNA_intronic |
| ADediting_589446 | chr17_16790982_+ | ncRNA_intronic |
| ADediting_589447 | chr17_16791011_+ | ncRNA_intronic |
| ADediting_589448 | chr17_16791058_+ | ncRNA_intronic |
| ADediting_589449 | chr17_16791340_+ | ncRNA_intronic |
| ADediting_589450 | chr17_16791358_+ | ncRNA_intronic |
| ADediting_589451 | chr17_16791364_+ | ncRNA_intronic |
| ADediting_589452 | chr17_16791377_+ | ncRNA_intronic |
| ADediting_589453 | chr17_16791384_+ | ncRNA_intronic |
| ADediting_589454 | chr17_16791387_+ | ncRNA_intronic |
| ADediting_589455 | chr17_16791388_+ | ncRNA_intronic |
| ADediting_589456 | chr17_16791409_+ | ncRNA_intronic |
| ADediting_589457 | chr17_16791410_+ | ncRNA_intronic |
| ADediting_589458 | chr17_16791413_+ | ncRNA_intronic |
| ADediting_589459 | chr17_16791433_+ | ncRNA_intronic |
| ADediting_589460 | chr17_16791441_+ | ncRNA_intronic |
| ADediting_589461 | chr17_16791456_+ | ncRNA_intronic |
| ADediting_589462 | chr17_16791462_+ | ncRNA_intronic |
| ADediting_589463 | chr17_16791465_+ | ncRNA_intronic |
| ADediting_589464 | chr17_16791504_+ | ncRNA_intronic |
| ADediting_589465 | chr17_16792730_+ | ncRNA_intronic |
| ADediting_589466 | chr17_16792733_+ | ncRNA_intronic |
| ADediting_589467 | chr17_16792740_+ | ncRNA_intronic |
| ADediting_589468 | chr17_16792761_+ | ncRNA_intronic |
| ADediting_589469 | chr17_16792764_+ | ncRNA_intronic |
| ADediting_589470 | chr17_16792781_+ | ncRNA_intronic |
| ADediting_589471 | chr17_16792788_+ | ncRNA_intronic |
| ADediting_589472 | chr17_16793547_+ | ncRNA_intronic |
| ADediting_589473 | chr17_16793575_+ | ncRNA_intronic |
| ADediting_589474 | chr17_16793610_+ | ncRNA_intronic |
| ADediting_589475 | chr17_16793615_+ | ncRNA_intronic |
| ADediting_589476 | chr17_16793616_+ | ncRNA_intronic |
| ADediting_589477 | chr17_16795651_+ | ncRNA_exonic |
| ADediting_589478 | chr17_16795775_+ | ncRNA_exonic |
| ADediting_589479 | chr17_16795807_+ | ncRNA_exonic |
| ADediting_589480 | chr17_16795849_+ | ncRNA_exonic |
| ADediting_589481 | chr17_16795867_+ | ncRNA_exonic |
| ADediting_589482 | chr17_16804373_+ | ncRNA_exonic |
| ADediting_589483 | chr17_16804374_+ | ncRNA_exonic |
| ADediting_589484 | chr17_16804402_+ | ncRNA_exonic |
| ADediting_589485 | chr17_16804410_+ | ncRNA_exonic |
| ADediting_1545441 | chr17_16790696_+ | ncRNA_intronic |
| ADediting_1545442 | chr17_16790731_+ | ncRNA_intronic |
| ADediting_1545443 | chr17_16790750_+ | ncRNA_intronic |
| ADediting_1545444 | chr17_16791072_+ | ncRNA_intronic |
| ADediting_1545445 | chr17_16792724_+ | ncRNA_intronic |
| ADediting_1545446 | chr17_16792738_+ | ncRNA_intronic |
| ADediting_1545447 | chr17_16792745_+ | ncRNA_intronic |
| ADediting_1545448 | chr17_16792769_+ | ncRNA_intronic |
| ADediting_1545449 | chr17_16795769_+ | ncRNA_exonic |
| ADediting_1626016 | chr17_16792737_+ | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_589415 | chr17_16790615_+ | SINE | Alu | Name=AluJb |
| ADediting_589416 | chr17_16790617_+ | SINE | Alu | Name=AluJb |
| ADediting_589417 | chr17_16790618_+ | SINE | Alu | Name=AluJb |
| ADediting_589418 | chr17_16790631_+ | SINE | Alu | Name=AluJb |
| ADediting_589419 | chr17_16790653_+ | SINE | Alu | Name=AluJb |
| ADediting_589420 | chr17_16790656_+ | SINE | Alu | Name=AluJb |
| ADediting_589421 | chr17_16790672_+ | SINE | Alu | Name=AluJb |
| ADediting_589422 | chr17_16790677_+ | SINE | Alu | Name=AluJb |
| ADediting_589423 | chr17_16790678_+ | SINE | Alu | Name=AluJb |
| ADediting_589424 | chr17_16790691_+ | SINE | Alu | Name=AluJb |
| ADediting_589425 | chr17_16790692_+ | SINE | Alu | Name=AluJb |
| ADediting_589426 | chr17_16790704_+ | SINE | Alu | Name=AluJb |
| ADediting_589427 | chr17_16790721_+ | SINE | Alu | Name=AluJb |
| ADediting_589428 | chr17_16790734_+ | SINE | Alu | Name=AluJb |
| ADediting_589429 | chr17_16790736_+ | SINE | Alu | Name=AluJb |
| ADediting_589430 | chr17_16790740_+ | SINE | Alu | Name=AluJb |
| ADediting_589431 | chr17_16790779_+ | SINE | Alu | Name=AluJb |
| ADediting_589432 | chr17_16790782_+ | SINE | Alu | Name=AluJb |
| ADediting_589433 | chr17_16790785_+ | SINE | Alu | Name=AluJb |
| ADediting_589434 | chr17_16790786_+ | SINE | Alu | Name=AluJb |
| ADediting_589435 | chr17_16790789_+ | SINE | Alu | Name=AluJb |
| ADediting_589436 | chr17_16790799_+ | SINE | Alu | Name=AluJb |
| ADediting_589437 | chr17_16790801_+ | SINE | Alu | Name=AluJb |
| ADediting_589438 | chr17_16790917_+ | SINE | Alu | Name=AluJb |
| ADediting_589439 | chr17_16790937_+ | SINE | Alu | Name=AluJb |
| ADediting_589440 | chr17_16790952_+ | SINE | Alu | Name=AluJb |
| ADediting_589441 | chr17_16790954_+ | SINE | Alu | Name=AluJb |
| ADediting_589442 | chr17_16790961_+ | SINE | Alu | Name=AluJb |
| ADediting_589443 | chr17_16790962_+ | SINE | Alu | Name=AluJb |
| ADediting_589444 | chr17_16790978_+ | SINE | Alu | Name=AluJb |
| ADediting_589445 | chr17_16790979_+ | SINE | Alu | Name=AluJb |
| ADediting_589446 | chr17_16790982_+ | SINE | Alu | Name=AluJb |
| ADediting_589447 | chr17_16791011_+ | SINE | Alu | Name=AluJb |
| ADediting_589448 | chr17_16791058_+ | SINE | Alu | Name=AluJb |
| ADediting_589449 | chr17_16791340_+ | SINE | Alu | Name=AluSp |
| ADediting_589450 | chr17_16791358_+ | SINE | Alu | Name=AluSp |
| ADediting_589451 | chr17_16791364_+ | SINE | Alu | Name=AluSp |
| ADediting_589452 | chr17_16791377_+ | SINE | Alu | Name=AluSp |
| ADediting_589453 | chr17_16791384_+ | SINE | Alu | Name=AluSp |
| ADediting_589454 | chr17_16791387_+ | SINE | Alu | Name=AluSp |
| ADediting_589455 | chr17_16791388_+ | SINE | Alu | Name=AluSp |
| ADediting_589456 | chr17_16791409_+ | SINE | Alu | Name=AluSp |
| ADediting_589457 | chr17_16791410_+ | SINE | Alu | Name=AluSp |
| ADediting_589458 | chr17_16791413_+ | SINE | Alu | Name=AluSp |
| ADediting_589459 | chr17_16791433_+ | SINE | Alu | Name=AluSp |
| ADediting_589460 | chr17_16791441_+ | SINE | Alu | Name=AluSp |
| ADediting_589461 | chr17_16791456_+ | SINE | Alu | Name=AluSp |
| ADediting_589462 | chr17_16791462_+ | SINE | Alu | Name=AluSp |
| ADediting_589463 | chr17_16791465_+ | SINE | Alu | Name=AluSp |
| ADediting_589464 | chr17_16791504_+ | SINE | Alu | Name=AluSp |
| ADediting_589472 | chr17_16793547_+ | SINE | Alu | Name=AluJb |
| ADediting_589473 | chr17_16793575_+ | SINE | Alu | Name=AluJb |
| ADediting_589474 | chr17_16793610_+ | SINE | Alu | Name=AluJb |
| ADediting_589475 | chr17_16793615_+ | SINE | Alu | Name=AluJb |
| ADediting_589476 | chr17_16793616_+ | SINE | Alu | Name=AluJb |
| ADediting_589477 | chr17_16795651_+ | SINE | Alu | Name=AluJo |
| ADediting_589478 | chr17_16795775_+ | SINE | Alu | Name=AluJo |
| ADediting_589479 | chr17_16795807_+ | SINE | Alu | Name=AluJo |
| ADediting_589480 | chr17_16795849_+ | SINE | Alu | Name=AluJo |
| ADediting_589481 | chr17_16795867_+ | SINE | Alu | Name=AluJo |
| ADediting_1545441 | chr17_16790696_+ | SINE | Alu | Name=AluJb |
| ADediting_1545442 | chr17_16790731_+ | SINE | Alu | Name=AluJb |
| ADediting_1545443 | chr17_16790750_+ | SINE | Alu | Name=AluJb |
| ADediting_1545444 | chr17_16791072_+ | SINE | Alu | Name=AluJb |
| ADediting_1545449 | chr17_16795769_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for USP32P1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for USP32P1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for USP32P1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for USP32P1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-340-3p | chr17 | 16795646 | 16795652 | 7mer-m8 | 16795632 | 16795653 | 146 | -17.88 |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-6827-3p | chr17 | 16795646 | 16795652 | 7mer-m8 | 16795633 | 16795653 | 140 | -14.58 |
| ADediting_589482 | chr17_16804373_+ | ENSG00000188933.16 | ENST00000341745.3 | USP32P1-201 | hsa-miR-1284 | chr17 | 16804367 | 16804374 | 8mer-1a | 16804355 | 16804374 | 149 | -13.41 |
| ADediting_589482 | chr17_16804373_+ | ENSG00000188933.16 | ENST00000393005.6 | USP32P1-202 | hsa-miR-1284 | chr17 | 16804367 | 16804374 | 8mer-1a | 16804355 | 16804374 | 149 | -13.41 |
| ADediting_589483 | chr17_16804374_+ | ENSG00000188933.16 | ENST00000341745.3 | USP32P1-201 | hsa-miR-3682-5p | chr17 | 16804373 | 16804379 | 7mer-m8 | 16804358 | 16804380 | 143 | -9.45 |
| ADediting_589483 | chr17_16804374_+ | ENSG00000188933.16 | ENST00000393005.6 | USP32P1-202 | hsa-miR-3682-5p | chr17 | 16804373 | 16804379 | 7mer-m8 | 16804358 | 16804380 | 143 | -9.45 |
| ADediting_589484 | chr17_16804402_+ | ENSG00000188933.16 | ENST00000341745.3 | USP32P1-201 | hsa-miR-4423-3p | chr17 | 16804400 | 16804406 | 7mer-m8 | 16804384 | 16804407 | 145 | -13.84 |
| ADediting_589484 | chr17_16804402_+ | ENSG00000188933.16 | ENST00000341745.3 | USP32P1-201 | hsa-miR-5582-5p | chr17 | 16804399 | 16804406 | 8mer-1a | 16804386 | 16804406 | 154 | -20.7 |
| ADediting_589484 | chr17_16804402_+ | ENSG00000188933.16 | ENST00000393005.6 | USP32P1-202 | hsa-miR-4423-3p | chr17 | 16804400 | 16804406 | 7mer-m8 | 16804384 | 16804407 | 145 | -13.84 |
| ADediting_589484 | chr17_16804402_+ | ENSG00000188933.16 | ENST00000393005.6 | USP32P1-202 | hsa-miR-5582-5p | chr17 | 16804399 | 16804406 | 8mer-1a | 16804386 | 16804406 | 154 | -20.7 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-10a-5p | chr17 | 16795649 | 16795655 | 7mer-m8 | 16795636 | 16795656 | 142 | -12.31 |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-10b-5p | chr17 | 16795649 | 16795655 | 7mer-m8 | 16795631 | 16795656 | 144 | -11.87 |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-339-5p | chr17 | 16795648 | 16795654 | 7mer-m8 | 16795634 | 16795655 | 151 | -17.11 |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-4725-5p | chr17 | 16795650 | 16795656 | 7mer-m8 | 16795637 | 16795657 | 140 | -15.96 |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-504-5p | chr17 | 16795650 | 16795656 | 7mer-m8 | 16795638 | 16795657 | 147 | -18.15 |
| ADediting_589477 | chr17_16795651_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-5699-3p | chr17 | 16795647 | 16795653 | 7mer-m8 | 16795633 | 16795654 | 141 | -16.39 |
| ADediting_589478 | chr17_16795775_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-4486 | chr17 | 16795770 | 16795776 | 7mer-m8 | 16795762 | 16795777 | 145 | -25.35 |
| ADediting_589479 | chr17_16795807_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-10a-5p | chr17 | 16795805 | 16795811 | 7mer-m8 | 16795790 | 16795812 | 153 | -13.85 |
| ADediting_589479 | chr17_16795807_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-10b-5p | chr17 | 16795805 | 16795811 | 7mer-m8 | 16795790 | 16795812 | 145 | -13.85 |
| ADediting_589479 | chr17_16795807_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-339-5p | chr17 | 16795804 | 16795810 | 7mer-m8 | 16795789 | 16795811 | 140 | -15.06 |
| ADediting_589479 | chr17_16795807_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-4725-5p | chr17 | 16795806 | 16795812 | 7mer-m8 | 16795793 | 16795813 | 140 | -15.96 |
| ADediting_589479 | chr17_16795807_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-504-5p | chr17 | 16795806 | 16795812 | 7mer-m8 | 16795793 | 16795813 | 147 | -19.45 |
| ADediting_589479 | chr17_16795807_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-5699-3p | chr17 | 16795803 | 16795809 | 7mer-m8 | 16795789 | 16795810 | 142 | -17.7 |
| ADediting_589480 | chr17_16795849_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-8081 | chr17 | 16795843 | 16795849 | 7mer-m8 | 16795828 | 16795850 | 153 | -14.69 |
| ADediting_589481 | chr17_16795867_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-4728-3p | chr17 | 16795865 | 16795871 | 7mer-m8 | 16795848 | 16795872 | 140 | -8.34 |
| ADediting_589481 | chr17_16795867_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-7160-5p | chr17 | 16795863 | 16795870 | 8mer-1a | 16795850 | 16795870 | 154 | -24.55 |
| ADediting_589481 | chr17_16795867_+ | ENSG00000188933.16 | ENST00000444558.5 | USP32P1-205 | hsa-miR-7162-3p | chr17 | 16795862 | 16795868 | 7mer-m8 | 16795851 | 16795869 | 150 | -18.02 |
| ADediting_589485 | chr17_16804410_+ | ENSG00000188933.16 | ENST00000341745.3 | USP32P1-201 | hsa-miR-577 | chr17 | 16804407 | 16804413 | 7mer-m8 | 16804397 | 16804414 | 153 | -13.31 |
| ADediting_589485 | chr17_16804410_+ | ENSG00000188933.16 | ENST00000393005.6 | USP32P1-202 | hsa-miR-577 | chr17 | 16804407 | 16804413 | 7mer-m8 | 16804397 | 16804414 | 153 | -13.31 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
| Differentially expressed lncRNA-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for USP32P1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000393005.6 | lncRNA |  |  |
| ENST00000444558.5 | lncRNA |  |  |
| ENST00000341745.3 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_589482 | ENST00000393005.6 | chr17_16804373_+ | 3764 | -1114.70 | -1113.70 | -1117.70 |
| ADediting_589483 | ENST00000393005.6 | chr17_16804374_+ | 3765 | -1114.20 | -1113.70 | -1117.70 |
| ADediting_589484 | ENST00000393005.6 | chr17_16804402_+ | 3793 | -1116.30 | -1113.70 | -1117.70 |
| ADediting_589485 | ENST00000393005.6 | chr17_16804410_+ | 3801 | -1113.90 | -1113.70 | -1117.70 |
| ADediting_589477 | ENST00000444558.5 | chr17_16795651_+ | 1186 | -1298.10 | -1298.80 | -1301.20 |
| ADediting_1545449 | ENST00000444558.5 | chr17_16795769_+ | 1304 | -1299.90 | -1298.80 | -1301.20 |
| ADediting_589478 | ENST00000444558.5 | chr17_16795775_+ | 1310 | -1298.00 | -1298.80 | -1301.20 |
| ADediting_589479 | ENST00000444558.5 | chr17_16795807_+ | 1342 | -1302.60 | -1298.80 | -1301.20 |
| ADediting_589480 | ENST00000444558.5 | chr17_16795849_+ | 1384 | -1298.50 | -1298.80 | -1301.20 |
| ADediting_589481 | ENST00000444558.5 | chr17_16795867_+ | 1402 | -1298.10 | -1298.80 | -1301.20 |
| ADediting_589482 | ENST00000341745.3 | chr17_16804373_+ | 3151 | -884.30 | -881.70 | -887.50 |
| ADediting_589483 | ENST00000341745.3 | chr17_16804374_+ | 3152 | -886.60 | -881.70 | -887.50 |
| ADediting_589484 | ENST00000341745.3 | chr17_16804402_+ | 3180 | -885.30 | -881.70 | -887.50 |
| ADediting_589485 | ENST00000341745.3 | chr17_16804410_+ | 3188 | -882.10 | -881.70 | -887.50 |
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Relation with ADAR for USP32P1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.3577875067855e-22 | 0.517072130317297 | 7.41872935672518e-31 | 0.593244897292679 | 0.656111589373582 | 0.0253891514243779 |
| AC | 7.80621939865636e-10 | 0.376377753809405 | 1.71561806440771e-09 | 0.369214174700308 | 6.71605378144896e-08 | 0.333295687415163 |
| PCC | 2.91322348004783e-07 | 0.360904318803131 | 8.22382321019975e-08 | 0.376118708267608 | 0.000145595113483256 | 0.271450486840871 |
| CER | 3.85477175727658e-05 | 0.329398804573923 | 0.00575320169068068 | 0.22447060439881 | 0.895297019349062 | 0.0108358047469824 |
| TCX | 1.0108134730628e-06 | 0.386811723085231 | 6.11373443109857e-06 | 0.359819521617571 | 0.441673720328972 | 0.0632851991628754 |
| FP | 1.8314128612556e-18 | 0.595504418202832 | 4.81582829055239e-18 | 0.589549149824531 | 0.0131077486124526 | 0.185634686904663 |
| IFG | 0.0197928785088633 | 0.462916361048269 | 0.00808077150181108 | 0.517381912558277 | 0.000210131345080528 | 0.675659147150222 |
| PG | 6.42578960620981e-19 | 0.591237052210978 | 3.12043710200337e-22 | 0.63316338352556 | 0.859838180678405 | -0.0130348069647015 |
| STG | 6.93875360694083e-06 | 0.468607736840873 | 1.71344064708562e-05 | 0.45043613657566 | 0.16376259093445 | 0.153334642750516 |
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Relation with AD stages for USP32P1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for USP32P1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for USP32P1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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