ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for CNKSR3

Gene summary

Gene information	Gene symbol	CNKSR3
	Gene ID	154043
	Gene name	CNKSR family member 3
	Synonyms	CNK3\|CNK3/IPCEF1\|MAGI1
	Cytomap	6q25.2
	Type of gene	protein-coding
	Description	connector enhancer of kinase suppressor of ras 3CNK homolog protein 3connector enhancer of KSR 3maguin-like proteinmembrane associated guanylate kinase, WW and PDZ domain containing 1membrane-associated guanylate kinase-interacting protein-like 1
	Modification date	20200320
	UniProtAcc
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for CNKSR3

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_1241750(154388906, -), ADediting_1241751(154390454, -), ADediting_1241752(154390458, -), ADediting_1241753(154390461, -), ADediting_1241754(154390903, -), ADediting_1241755(154391326, -), ADediting_1241756(154391372, -), ADediting_1241757(154391382, -), ADediting_1241758(154391428, -), ADediting_1241759(154391505, -), ADediting_1241760(154391949, -), ADediting_1241761(154391955, -), ADediting_1241762(154391967, -), ADediting_1241763(154391977, -), ADediting_1241764(154391990, -), ADediting_1241765(154392027, -), ADediting_1241766(154392044, -), ADediting_1241767(154392046, -), ADediting_1241768(154392047, -), ADediting_1241769(154392066, -), ADediting_1241770(154392088, -), ADediting_1241771(154392098, -), ADediting_1241772(154392110, -), ADediting_1241773(154393042, -), ADediting_1241774(154393051, -), ADediting_1241775(154393052, -), ADediting_1241776(154393078, -), ADediting_1241777(154393093, -), ADediting_1241778(154393102, -), ADediting_1241779(154393160, -), ADediting_1241780(154393164, -), ADediting_1241781(154393165, -), ADediting_1241782(154393186, -), ADediting_1241783(154393189, -), ADediting_1241784(154393193, -), ADediting_1241785(154395808, -), ADediting_1241786(154395859, -), ADediting_1241787(154395899, -), ADediting_1241788(154395947, -), ADediting_1241789(154396872, -), ADediting_1241790(154396876, -), ADediting_1241791(154396938, -), ADediting_1241792(154397001, -), ADediting_1241793(154397011, -), ADediting_1241794(154397035, -), ADediting_1241795(154398996, -), ADediting_1241796(154399040, -), ADediting_1241797(154403242, -), ADediting_1241798(154403286, -), ADediting_1241799(154404232, -), ADediting_1241800(154404268, -), ADediting_1241801(154404302, -), ADediting_1241802(154404338, -), ADediting_1241803(154404385, -), ADediting_1241804(154404393, -), ADediting_1241805(154404395, -), ADediting_1241806(154404410, -), ADediting_1241807(154404419, -), ADediting_1241808(154404443, -), ADediting_1241809(154404464, -), ADediting_1241810(154404481, -), ADediting_1241811(154404575, -), ADediting_1241812(154404587, -), ADediting_1241813(154404588, -), ADediting_1241814(154404597, -), ADediting_1241815(154404620, -), ADediting_1241816(154404621, -), ADediting_1241817(154404629, -), ADediting_1241818(154404652, -), ADediting_1241819(154404669, -), ADediting_1241820(154404720, -), ADediting_1241821(154404732, -), ADediting_1241822(154404749, -), ADediting_1241823(154404750, -), ADediting_1241824(154404756, -), ADediting_1241825(154404769, -), ADediting_1241826(154404780, -), ADediting_1241827(154404785, -), ADediting_1241828(154406725, -), ADediting_1241829(154406726, -), ADediting_1241830(154406744, -), ADediting_1241831(154406890, -), ADediting_1241832(154406896, -), ADediting_1241833(154406906, -), ADediting_1241834(154408136, -), ADediting_1241835(154408163, -), ADediting_1241836(154408218, -), ADediting_1241837(154408219, -), ADediting_1241838(154414878, -), ADediting_1241839(154415327, -), ADediting_1241840(154415328, -), ADediting_1241841(154415333, -), ADediting_1241842(154415342, -), ADediting_1241843(154415458, -), ADediting_1241844(154415468, -), ADediting_1241845(154415503, -), ADediting_1241846(154415504, -), ADediting_1241847(154415510, -), ADediting_1241848(154419150, -), ADediting_1241849(154419829, -), ADediting_1241850(154419835, -), ADediting_1241851(154419982, -), ADediting_1241852(154420006, -), ADediting_1241853(154420013, -), ADediting_1241854(154421068, -), ADediting_1241855(154421099, -), ADediting_1241856(154421106, -), ADediting_1241857(154421251, -), ADediting_1241858(154421269, -), ADediting_1241859(154435156, -), ADediting_1241860(154435160, -), ADediting_1241861(154437510, -), ADediting_1241862(154437516, -), ADediting_1241863(154437530, -), ADediting_1241864(154442366, -), ADediting_1241865(154442372, -), ADediting_1241866(154442433, -), ADediting_1241867(154444856, -), ADediting_1241868(154444872, -), ADediting_1241869(154455195, -), ADediting_1241870(154455207, -), ADediting_1241871(154455550, -), ADediting_1241872(154455559, -), ADediting_1241873(154455562, -), ADediting_1241874(154455615, -), ADediting_1241875(154455625, -), ADediting_1241876(154455626, -), ADediting_1241877(154455668, -), ADediting_1241878(154455694, -), ADediting_1241879(154455695, -), ADediting_1241880(154455697, -), ADediting_1241881(154463208, -), ADediting_1241882(154463329, -), ADediting_1241883(154467880, -), ADediting_1241884(154468330, -), ADediting_1241885(154468331, -), ADediting_1241886(154468921, -), ADediting_1241887(154468969, -), ADediting_1241888(154470286, -), ADediting_1241889(154470297, -), ADediting_1241890(154470353, -), ADediting_1241891(154470415, -), ADediting_1241892(154470422, -), ADediting_1241893(154471498, -), ADediting_1241894(154471501, -), ADediting_1241895(154473847, -), ADediting_1241896(154473988, -), ADediting_1241897(154474012, -), ADediting_1241898(154474017, -), ADediting_1241899(154474018, -), ADediting_1241900(154474055, -), ADediting_1241901(154474178, -), ADediting_1241902(154476212, -), ADediting_1241903(154476227, -), ADediting_1241904(154476349, -), ADediting_1241905(154477371, -), ADediting_1241906(154477387, -), ADediting_1241907(154477396, -), ADediting_1241908(154477435, -), ADediting_1241909(154477439, -), ADediting_1241910(154477449, -), ADediting_1241911(154477548, -), ADediting_1241912(154477567, -), ADediting_1241913(154477594, -), ADediting_1241914(154484461, -), ADediting_1241915(154484521, -), ADediting_1241916(154484590, -), ADediting_1241917(154484650, -), ADediting_1241918(154486388, -), ADediting_1241919(154486408, -), ADediting_1241920(154489313, -), ADediting_1241921(154489314, -), ADediting_1241922(154489334, -), ADediting_1241923(154489343, -), ADediting_1241924(154489431, -), ADediting_1241925(154489448, -), ADediting_1241926(154489462, -), ADediting_1241927(154489468, -), ADediting_1241928(154489474, -), ADediting_1241929(154492508, -), ADediting_1241930(154492525, -), ADediting_1241931(154492543, -), ADediting_1241932(154492566, -), ADediting_1241933(154495466, -), ADediting_1241934(154495501, -), ADediting_1241935(154495507, -), ADediting_1241936(154495509, -), ADediting_1241937(154495594, -), ADediting_1241938(154495607, -), ADediting_1241939(154495642, -), ADediting_1241940(154495647, -), ADediting_1241941(154495664, -), ADediting_1241942(154497159, -), ADediting_1241943(154497176, -), ADediting_1241944(154497276, -), ADediting_1241945(154497279, -), ADediting_1241946(154497341, -), ADediting_1241947(154499737, -), ADediting_1241948(154499745, -), ADediting_1241950(154505626, -), ADediting_1241951(154505636, -), ADediting_1241952(154505703, -), ADediting_1582937(154471428, -), ADediting_1660415(154407639, -),

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RNA editing positional annotations for CNKSR3 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_1241750	chr6_154388906_-	UTR3
ADediting_1241751	chr6_154390454_-	UTR3
ADediting_1241752	chr6_154390458_-	UTR3
ADediting_1241753	chr6_154390461_-	UTR3
ADediting_1241754	chr6_154390903_-	UTR3
ADediting_1241755	chr6_154391326_-	UTR3
ADediting_1241756	chr6_154391372_-	UTR3
ADediting_1241757	chr6_154391382_-	UTR3
ADediting_1241758	chr6_154391428_-	UTR3
ADediting_1241759	chr6_154391505_-	UTR3
ADediting_1241760	chr6_154391949_-	UTR3
ADediting_1241761	chr6_154391955_-	UTR3
ADediting_1241762	chr6_154391967_-	UTR3
ADediting_1241763	chr6_154391977_-	UTR3
ADediting_1241764	chr6_154391990_-	UTR3
ADediting_1241765	chr6_154392027_-	UTR3
ADediting_1241766	chr6_154392044_-	UTR3
ADediting_1241767	chr6_154392046_-	UTR3
ADediting_1241768	chr6_154392047_-	UTR3
ADediting_1241769	chr6_154392066_-	UTR3
ADediting_1241770	chr6_154392088_-	UTR3
ADediting_1241771	chr6_154392098_-	UTR3
ADediting_1241772	chr6_154392110_-	UTR3
ADediting_1241773	chr6_154393042_-	UTR3
ADediting_1241774	chr6_154393051_-	UTR3
ADediting_1241775	chr6_154393052_-	UTR3
ADediting_1241776	chr6_154393078_-	UTR3
ADediting_1241777	chr6_154393093_-	UTR3
ADediting_1241778	chr6_154393102_-	UTR3
ADediting_1241779	chr6_154393160_-	UTR3
ADediting_1241780	chr6_154393164_-	UTR3
ADediting_1241781	chr6_154393165_-	UTR3
ADediting_1241782	chr6_154393186_-	UTR3
ADediting_1241783	chr6_154393189_-	UTR3
ADediting_1241784	chr6_154393193_-	UTR3
ADediting_1241785	chr6_154395808_-	UTR3
ADediting_1241786	chr6_154395859_-	UTR3
ADediting_1241787	chr6_154395899_-	UTR3
ADediting_1241788	chr6_154395947_-	UTR3
ADediting_1241789	chr6_154396872_-	UTR3
ADediting_1241790	chr6_154396876_-	UTR3
ADediting_1241791	chr6_154396938_-	UTR3
ADediting_1241792	chr6_154397001_-	UTR3
ADediting_1241793	chr6_154397011_-	UTR3
ADediting_1241794	chr6_154397035_-	UTR3
ADediting_1241795	chr6_154398996_-	UTR3
ADediting_1241796	chr6_154399040_-	UTR3
ADediting_1241797	chr6_154403242_-	UTR3
ADediting_1241798	chr6_154403286_-	UTR3
ADediting_1241799	chr6_154404232_-	UTR3
ADediting_1241800	chr6_154404268_-	UTR3
ADediting_1241801	chr6_154404302_-	UTR3
ADediting_1241802	chr6_154404338_-	UTR3
ADediting_1241803	chr6_154404385_-	UTR3
ADediting_1241804	chr6_154404393_-	UTR3
ADediting_1241805	chr6_154404395_-	UTR3
ADediting_1241806	chr6_154404410_-	UTR3
ADediting_1241807	chr6_154404419_-	UTR3
ADediting_1241808	chr6_154404443_-	UTR3
ADediting_1241809	chr6_154404464_-	UTR3
ADediting_1241810	chr6_154404481_-	UTR3
ADediting_1241811	chr6_154404575_-	UTR3
ADediting_1241812	chr6_154404587_-	UTR3
ADediting_1241813	chr6_154404588_-	UTR3
ADediting_1241814	chr6_154404597_-	UTR3
ADediting_1241815	chr6_154404620_-	UTR3
ADediting_1241816	chr6_154404621_-	UTR3
ADediting_1241817	chr6_154404629_-	UTR3
ADediting_1241818	chr6_154404652_-	UTR3
ADediting_1241819	chr6_154404669_-	UTR3
ADediting_1241820	chr6_154404720_-	UTR3
ADediting_1241821	chr6_154404732_-	UTR3
ADediting_1241822	chr6_154404749_-	UTR3
ADediting_1241823	chr6_154404750_-	UTR3
ADediting_1241824	chr6_154404756_-	UTR3
ADediting_1241825	chr6_154404769_-	UTR3
ADediting_1241826	chr6_154404780_-	UTR3
ADediting_1241827	chr6_154404785_-	UTR3
ADediting_1241828	chr6_154406725_-	intronic
ADediting_1241829	chr6_154406726_-	intronic
ADediting_1241830	chr6_154406744_-	intronic
ADediting_1241831	chr6_154406890_-	intronic
ADediting_1241832	chr6_154406896_-	intronic
ADediting_1241833	chr6_154406906_-	intronic
ADediting_1241834	chr6_154408136_-	intronic
ADediting_1241835	chr6_154408163_-	intronic
ADediting_1241836	chr6_154408218_-	intronic
ADediting_1241837	chr6_154408219_-	intronic
ADediting_1241838	chr6_154414878_-	intronic
ADediting_1241839	chr6_154415327_-	intronic
ADediting_1241840	chr6_154415328_-	intronic
ADediting_1241841	chr6_154415333_-	intronic
ADediting_1241842	chr6_154415342_-	intronic
ADediting_1241843	chr6_154415458_-	intronic
ADediting_1241844	chr6_154415468_-	intronic
ADediting_1241845	chr6_154415503_-	intronic
ADediting_1241846	chr6_154415504_-	intronic
ADediting_1241847	chr6_154415510_-	intronic
ADediting_1241848	chr6_154419150_-	intronic
ADediting_1241849	chr6_154419829_-	intronic
ADediting_1241850	chr6_154419835_-	intronic
ADediting_1241851	chr6_154419982_-	intronic
ADediting_1241852	chr6_154420006_-	intronic
ADediting_1241853	chr6_154420013_-	intronic
ADediting_1241854	chr6_154421068_-	intronic
ADediting_1241855	chr6_154421099_-	intronic
ADediting_1241856	chr6_154421106_-	intronic
ADediting_1241857	chr6_154421251_-	intronic
ADediting_1241858	chr6_154421269_-	intronic
ADediting_1241859	chr6_154435156_-	intronic
ADediting_1241860	chr6_154435160_-	intronic
ADediting_1241861	chr6_154437510_-	intronic
ADediting_1241862	chr6_154437516_-	intronic
ADediting_1241863	chr6_154437530_-	intronic
ADediting_1241864	chr6_154442366_-	intronic
ADediting_1241865	chr6_154442372_-	intronic
ADediting_1241866	chr6_154442433_-	intronic
ADediting_1241867	chr6_154444856_-	intronic
ADediting_1241868	chr6_154444872_-	intronic
ADediting_1241869	chr6_154455195_-	intronic
ADediting_1241870	chr6_154455207_-	intronic
ADediting_1241871	chr6_154455550_-	intronic
ADediting_1241872	chr6_154455559_-	intronic
ADediting_1241873	chr6_154455562_-	intronic
ADediting_1241874	chr6_154455615_-	intronic
ADediting_1241875	chr6_154455625_-	intronic
ADediting_1241876	chr6_154455626_-	intronic
ADediting_1241877	chr6_154455668_-	intronic
ADediting_1241878	chr6_154455694_-	intronic
ADediting_1241879	chr6_154455695_-	intronic
ADediting_1241880	chr6_154455697_-	intronic
ADediting_1241881	chr6_154463208_-	intronic
ADediting_1241882	chr6_154463329_-	intronic
ADediting_1241883	chr6_154467880_-	intronic
ADediting_1241884	chr6_154468330_-	intronic
ADediting_1241885	chr6_154468331_-	intronic
ADediting_1241886	chr6_154468921_-	intronic
ADediting_1241887	chr6_154468969_-	intronic
ADediting_1241888	chr6_154470286_-	intronic
ADediting_1241889	chr6_154470297_-	intronic
ADediting_1241890	chr6_154470353_-	intronic
ADediting_1241891	chr6_154470415_-	intronic
ADediting_1241892	chr6_154470422_-	intronic
ADediting_1241893	chr6_154471498_-	intronic
ADediting_1241894	chr6_154471501_-	intronic
ADediting_1241895	chr6_154473847_-	intronic
ADediting_1241896	chr6_154473988_-	intronic
ADediting_1241897	chr6_154474012_-	intronic
ADediting_1241898	chr6_154474017_-	intronic
ADediting_1241899	chr6_154474018_-	intronic
ADediting_1241900	chr6_154474055_-	intronic
ADediting_1241901	chr6_154474178_-	intronic
ADediting_1241902	chr6_154476212_-	intronic
ADediting_1241903	chr6_154476227_-	intronic
ADediting_1241904	chr6_154476349_-	intronic
ADediting_1241905	chr6_154477371_-	intronic
ADediting_1241906	chr6_154477387_-	intronic
ADediting_1241907	chr6_154477396_-	intronic
ADediting_1241908	chr6_154477435_-	intronic
ADediting_1241909	chr6_154477439_-	intronic
ADediting_1241910	chr6_154477449_-	intronic
ADediting_1241911	chr6_154477548_-	intronic
ADediting_1241912	chr6_154477567_-	intronic
ADediting_1241913	chr6_154477594_-	intronic
ADediting_1241914	chr6_154484461_-	intronic
ADediting_1241915	chr6_154484521_-	intronic
ADediting_1241916	chr6_154484590_-	intronic
ADediting_1241917	chr6_154484650_-	intronic
ADediting_1241918	chr6_154486388_-	intronic
ADediting_1241919	chr6_154486408_-	intronic
ADediting_1241920	chr6_154489313_-	intronic
ADediting_1241921	chr6_154489314_-	intronic
ADediting_1241922	chr6_154489334_-	intronic
ADediting_1241923	chr6_154489343_-	intronic
ADediting_1241924	chr6_154489431_-	intronic
ADediting_1241925	chr6_154489448_-	intronic
ADediting_1241926	chr6_154489462_-	intronic
ADediting_1241927	chr6_154489468_-	intronic
ADediting_1241928	chr6_154489474_-	intronic
ADediting_1241929	chr6_154492508_-	intronic
ADediting_1241930	chr6_154492525_-	intronic
ADediting_1241931	chr6_154492543_-	intronic
ADediting_1241932	chr6_154492566_-	intronic
ADediting_1241933	chr6_154495466_-	intronic
ADediting_1241934	chr6_154495501_-	intronic
ADediting_1241935	chr6_154495507_-	intronic
ADediting_1241936	chr6_154495509_-	intronic
ADediting_1241937	chr6_154495594_-	intronic
ADediting_1241938	chr6_154495607_-	intronic
ADediting_1241939	chr6_154495642_-	intronic
ADediting_1241940	chr6_154495647_-	intronic
ADediting_1241941	chr6_154495664_-	intronic
ADediting_1241942	chr6_154497159_-	intronic
ADediting_1241943	chr6_154497176_-	intronic
ADediting_1241944	chr6_154497276_-	intronic
ADediting_1241945	chr6_154497279_-	intronic
ADediting_1241946	chr6_154497341_-	intronic
ADediting_1241947	chr6_154499737_-	intronic
ADediting_1241948	chr6_154499745_-	intronic
ADediting_1241950	chr6_154505626_-	intronic
ADediting_1241951	chr6_154505636_-	intronic
ADediting_1241952	chr6_154505703_-	intronic
ADediting_1582937	chr6_154471428_-	intronic
ADediting_1660415	chr6_154407639_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_1241750	chr6_154388906_-	LTR	ERVL	Name=LTR16D1
ADediting_1241751	chr6_154390454_-	LTR	ERVL	Name=LTR16D
ADediting_1241752	chr6_154390458_-	LTR	ERVL	Name=LTR16D
ADediting_1241753	chr6_154390461_-	LTR	ERVL	Name=LTR16D
ADediting_1241754	chr6_154390903_-	SINE	Alu	Name=AluSz
ADediting_1241755	chr6_154391326_-	SINE	Alu	Name=AluY
ADediting_1241756	chr6_154391372_-	SINE	Alu	Name=AluY
ADediting_1241757	chr6_154391382_-	SINE	Alu	Name=AluY
ADediting_1241758	chr6_154391428_-	SINE	Alu	Name=AluY
ADediting_1241759	chr6_154391505_-	SINE	Alu	Name=AluY
ADediting_1241760	chr6_154391949_-	SINE	Alu	Name=AluSc
ADediting_1241761	chr6_154391955_-	SINE	Alu	Name=AluSc
ADediting_1241762	chr6_154391967_-	SINE	Alu	Name=AluSc
ADediting_1241763	chr6_154391977_-	SINE	Alu	Name=AluSc
ADediting_1241764	chr6_154391990_-	SINE	Alu	Name=AluSc
ADediting_1241765	chr6_154392027_-	SINE	Alu	Name=AluSc
ADediting_1241766	chr6_154392044_-	SINE	Alu	Name=AluSc
ADediting_1241767	chr6_154392046_-	SINE	Alu	Name=AluSc
ADediting_1241768	chr6_154392047_-	SINE	Alu	Name=AluSc
ADediting_1241769	chr6_154392066_-	SINE	Alu	Name=AluSc
ADediting_1241770	chr6_154392088_-	SINE	Alu	Name=AluSc
ADediting_1241771	chr6_154392098_-	SINE	Alu	Name=AluSc
ADediting_1241772	chr6_154392110_-	SINE	Alu	Name=AluSc
ADediting_1241773	chr6_154393042_-	SINE	Alu	Name=AluSx1
ADediting_1241774	chr6_154393051_-	SINE	Alu	Name=AluSx1
ADediting_1241775	chr6_154393052_-	SINE	Alu	Name=AluSx1
ADediting_1241776	chr6_154393078_-	SINE	Alu	Name=AluSx1
ADediting_1241777	chr6_154393093_-	SINE	Alu	Name=AluSx1
ADediting_1241778	chr6_154393102_-	SINE	Alu	Name=AluSx1
ADediting_1241779	chr6_154393160_-	SINE	Alu	Name=AluSx1
ADediting_1241780	chr6_154393164_-	SINE	Alu	Name=AluSx1
ADediting_1241781	chr6_154393165_-	SINE	Alu	Name=AluSx1
ADediting_1241782	chr6_154393186_-	SINE	Alu	Name=AluSx1
ADediting_1241783	chr6_154393189_-	SINE	Alu	Name=AluSx1
ADediting_1241784	chr6_154393193_-	SINE	Alu	Name=AluSx1
ADediting_1241785	chr6_154395808_-	SINE	Alu	Name=AluJb
ADediting_1241786	chr6_154395859_-	SINE	Alu	Name=AluJb
ADediting_1241787	chr6_154395899_-	SINE	Alu	Name=AluJb
ADediting_1241788	chr6_154395947_-	SINE	Alu	Name=AluJb
ADediting_1241789	chr6_154396872_-	SINE	Alu	Name=AluY
ADediting_1241790	chr6_154396876_-	SINE	Alu	Name=AluY
ADediting_1241791	chr6_154396938_-	SINE	Alu	Name=AluY
ADediting_1241792	chr6_154397001_-	SINE	Alu	Name=AluY
ADediting_1241793	chr6_154397011_-	SINE	Alu	Name=AluY
ADediting_1241794	chr6_154397035_-	SINE	Alu	Name=AluY
ADediting_1241795	chr6_154398996_-	SINE	Alu	Name=AluSp
ADediting_1241796	chr6_154399040_-	SINE	Alu	Name=AluSp
ADediting_1241797	chr6_154403242_-	SINE	Alu	Name=AluSx1
ADediting_1241798	chr6_154403286_-	SINE	Alu	Name=AluSx1
ADediting_1241799	chr6_154404232_-	SINE	Alu	Name=AluSx1
ADediting_1241800	chr6_154404268_-	SINE	Alu	Name=AluSx1
ADediting_1241801	chr6_154404302_-	SINE	Alu	Name=AluSx1
ADediting_1241802	chr6_154404338_-	SINE	Alu	Name=AluSx1
ADediting_1241803	chr6_154404385_-	SINE	Alu	Name=AluSx1
ADediting_1241804	chr6_154404393_-	SINE	Alu	Name=AluSx1
ADediting_1241805	chr6_154404395_-	SINE	Alu	Name=AluSx1
ADediting_1241806	chr6_154404410_-	SINE	Alu	Name=AluSx1
ADediting_1241807	chr6_154404419_-	SINE	Alu	Name=AluSx1
ADediting_1241808	chr6_154404443_-	SINE	Alu	Name=AluSx1
ADediting_1241809	chr6_154404464_-	SINE	Alu	Name=AluSx1
ADediting_1241810	chr6_154404481_-	SINE	Alu	Name=AluSx1
ADediting_1241811	chr6_154404575_-	SINE	Alu	Name=AluSx1
ADediting_1241812	chr6_154404587_-	SINE	Alu	Name=AluSx1
ADediting_1241813	chr6_154404588_-	SINE	Alu	Name=AluSx1
ADediting_1241814	chr6_154404597_-	SINE	Alu	Name=AluSx1
ADediting_1241815	chr6_154404620_-	SINE	Alu	Name=AluSx1
ADediting_1241816	chr6_154404621_-	SINE	Alu	Name=AluSx1
ADediting_1241817	chr6_154404629_-	SINE	Alu	Name=AluSx1
ADediting_1241818	chr6_154404652_-	SINE	Alu	Name=AluSx1
ADediting_1241819	chr6_154404669_-	SINE	Alu	Name=AluSx1
ADediting_1241820	chr6_154404720_-	SINE	Alu	Name=AluSx1
ADediting_1241821	chr6_154404732_-	SINE	Alu	Name=AluSx1
ADediting_1241822	chr6_154404749_-	SINE	Alu	Name=AluSx1
ADediting_1241823	chr6_154404750_-	SINE	Alu	Name=AluSx1
ADediting_1241824	chr6_154404756_-	SINE	Alu	Name=AluSx1
ADediting_1241825	chr6_154404769_-	SINE	Alu	Name=AluSx1
ADediting_1241826	chr6_154404780_-	SINE	Alu	Name=AluSx1
ADediting_1241827	chr6_154404785_-	SINE	Alu	Name=AluSx1
ADediting_1241828	chr6_154406725_-	SINE	Alu	Name=AluSc
ADediting_1241829	chr6_154406726_-	SINE	Alu	Name=AluSc
ADediting_1241830	chr6_154406744_-	SINE	Alu	Name=AluSc
ADediting_1241831	chr6_154406890_-	SINE	Alu	Name=AluSc
ADediting_1241832	chr6_154406896_-	SINE	Alu	Name=AluSc
ADediting_1241833	chr6_154406906_-	SINE	Alu	Name=AluSc
ADediting_1241834	chr6_154408136_-	SINE	Alu	Name=AluSg
ADediting_1241835	chr6_154408163_-	SINE	Alu	Name=AluSg
ADediting_1241836	chr6_154408218_-	SINE	Alu	Name=AluSg
ADediting_1241837	chr6_154408219_-	SINE	Alu	Name=AluSg
ADediting_1241838	chr6_154414878_-	SINE	Alu	Name=AluJr
ADediting_1241839	chr6_154415327_-	SINE	Alu	Name=AluSx
ADediting_1241840	chr6_154415328_-	SINE	Alu	Name=AluSx
ADediting_1241841	chr6_154415333_-	SINE	Alu	Name=AluSx
ADediting_1241842	chr6_154415342_-	SINE	Alu	Name=AluSx
ADediting_1241843	chr6_154415458_-	SINE	Alu	Name=AluSx
ADediting_1241844	chr6_154415468_-	SINE	Alu	Name=AluSx
ADediting_1241845	chr6_154415503_-	SINE	Alu	Name=AluSx
ADediting_1241846	chr6_154415504_-	SINE	Alu	Name=AluSx
ADediting_1241847	chr6_154415510_-	SINE	Alu	Name=AluSx
ADediting_1241848	chr6_154419150_-	SINE	Alu	Name=AluJr
ADediting_1241849	chr6_154419829_-	SINE	Alu	Name=AluSq
ADediting_1241850	chr6_154419835_-	SINE	Alu	Name=AluSq
ADediting_1241851	chr6_154419982_-	SINE	Alu	Name=AluSq
ADediting_1241852	chr6_154420006_-	SINE	Alu	Name=AluSq
ADediting_1241853	chr6_154420013_-	SINE	Alu	Name=AluSq
ADediting_1241854	chr6_154421068_-	SINE	Alu	Name=AluSz6
ADediting_1241855	chr6_154421099_-	SINE	Alu	Name=AluSz6
ADediting_1241856	chr6_154421106_-	SINE	Alu	Name=AluSz6
ADediting_1241857	chr6_154421251_-	SINE	Alu	Name=AluSz6
ADediting_1241858	chr6_154421269_-	SINE	Alu	Name=AluSz6
ADediting_1241859	chr6_154435156_-	SINE	Alu	Name=AluJb
ADediting_1241860	chr6_154435160_-	SINE	Alu	Name=AluJb
ADediting_1241861	chr6_154437510_-	SINE	Alu	Name=AluSx1
ADediting_1241862	chr6_154437516_-	SINE	Alu	Name=AluSx1
ADediting_1241863	chr6_154437530_-	SINE	Alu	Name=AluSx1
ADediting_1241864	chr6_154442366_-	SINE	Alu	Name=AluY
ADediting_1241865	chr6_154442372_-	SINE	Alu	Name=AluY
ADediting_1241866	chr6_154442433_-	SINE	Alu	Name=AluY
ADediting_1241867	chr6_154444856_-	SINE	Alu	Name=AluSc5
ADediting_1241868	chr6_154444872_-	SINE	Alu	Name=AluSc5
ADediting_1241869	chr6_154455195_-	SINE	Alu	Name=AluSq2
ADediting_1241870	chr6_154455207_-	SINE	Alu	Name=AluSq2
ADediting_1241871	chr6_154455550_-	SINE	Alu	Name=AluSx1
ADediting_1241872	chr6_154455559_-	SINE	Alu	Name=AluSx1
ADediting_1241873	chr6_154455562_-	SINE	Alu	Name=AluSx1
ADediting_1241874	chr6_154455615_-	SINE	Alu	Name=AluSx1
ADediting_1241875	chr6_154455625_-	SINE	Alu	Name=AluSx1
ADediting_1241876	chr6_154455626_-	SINE	Alu	Name=AluSx1
ADediting_1241877	chr6_154455668_-	SINE	Alu	Name=AluSx1
ADediting_1241878	chr6_154455694_-	SINE	Alu	Name=AluSx1
ADediting_1241879	chr6_154455695_-	SINE	Alu	Name=AluSx1
ADediting_1241880	chr6_154455697_-	SINE	Alu	Name=AluSx1
ADediting_1241881	chr6_154463208_-	SINE	Alu	Name=AluY
ADediting_1241882	chr6_154463329_-	SINE	Alu	Name=AluY
ADediting_1241883	chr6_154467880_-	SINE	Alu	Name=AluSq2
ADediting_1241884	chr6_154468330_-	SINE	Alu	Name=AluSz
ADediting_1241885	chr6_154468331_-	SINE	Alu	Name=AluSz
ADediting_1241886	chr6_154468921_-	SINE	Alu	Name=FRAM
ADediting_1241887	chr6_154468969_-	SINE	Alu	Name=FRAM
ADediting_1241888	chr6_154470286_-	SINE	Alu	Name=AluSx
ADediting_1241889	chr6_154470297_-	SINE	Alu	Name=AluSx
ADediting_1241890	chr6_154470353_-	SINE	Alu	Name=AluSx
ADediting_1241891	chr6_154470415_-	SINE	Alu	Name=AluSx
ADediting_1241892	chr6_154470422_-	SINE	Alu	Name=AluSx
ADediting_1241893	chr6_154471498_-	SINE	Alu	Name=AluSz
ADediting_1241894	chr6_154471501_-	SINE	Alu	Name=AluSz
ADediting_1241895	chr6_154473847_-	SINE	Alu	Name=AluSc5
ADediting_1241896	chr6_154473988_-	SINE	Alu	Name=AluSc5
ADediting_1241897	chr6_154474012_-	SINE	Alu	Name=AluSc5
ADediting_1241898	chr6_154474017_-	SINE	Alu	Name=AluSc5
ADediting_1241899	chr6_154474018_-	SINE	Alu	Name=AluSc5
ADediting_1241900	chr6_154474055_-	SINE	Alu	Name=AluSc5
ADediting_1241901	chr6_154474178_-	SINE	Alu	Name=AluSc8
ADediting_1241902	chr6_154476212_-	SINE	Alu	Name=AluSq2
ADediting_1241903	chr6_154476227_-	SINE	Alu	Name=AluSq2
ADediting_1241904	chr6_154476349_-	SINE	Alu	Name=AluSq2
ADediting_1241905	chr6_154477371_-	SINE	Alu	Name=AluSx
ADediting_1241906	chr6_154477387_-	SINE	Alu	Name=AluSx
ADediting_1241907	chr6_154477396_-	SINE	Alu	Name=AluSx
ADediting_1241908	chr6_154477435_-	SINE	Alu	Name=AluSx
ADediting_1241909	chr6_154477439_-	SINE	Alu	Name=AluSx
ADediting_1241910	chr6_154477449_-	SINE	Alu	Name=AluSx
ADediting_1241911	chr6_154477548_-	SINE	Alu	Name=AluSx
ADediting_1241912	chr6_154477567_-	SINE	Alu	Name=AluSx
ADediting_1241913	chr6_154477594_-	SINE	Alu	Name=AluSx
ADediting_1241914	chr6_154484461_-	SINE	Alu	Name=AluSg
ADediting_1241915	chr6_154484521_-	SINE	Alu	Name=AluSg
ADediting_1241916	chr6_154484590_-	SINE	Alu	Name=AluSg
ADediting_1241917	chr6_154484650_-	SINE	Alu	Name=AluSg
ADediting_1241918	chr6_154486388_-	SINE	Alu	Name=AluSz
ADediting_1241919	chr6_154486408_-	SINE	Alu	Name=AluSz
ADediting_1241920	chr6_154489313_-	SINE	Alu	Name=AluSz
ADediting_1241921	chr6_154489314_-	SINE	Alu	Name=AluSz
ADediting_1241922	chr6_154489334_-	SINE	Alu	Name=AluSz
ADediting_1241923	chr6_154489343_-	SINE	Alu	Name=AluSz
ADediting_1241924	chr6_154489431_-	SINE	Alu	Name=AluSz
ADediting_1241925	chr6_154489448_-	SINE	Alu	Name=AluSz
ADediting_1241926	chr6_154489462_-	SINE	Alu	Name=AluSz
ADediting_1241927	chr6_154489468_-	SINE	Alu	Name=AluSz
ADediting_1241928	chr6_154489474_-	SINE	Alu	Name=AluSz
ADediting_1241929	chr6_154492508_-	SINE	Alu	Name=AluSz
ADediting_1241930	chr6_154492525_-	SINE	Alu	Name=AluSz
ADediting_1241931	chr6_154492543_-	SINE	Alu	Name=AluSz
ADediting_1241932	chr6_154492566_-	SINE	Alu	Name=AluSz
ADediting_1241933	chr6_154495466_-	SINE	Alu	Name=AluJr
ADediting_1241934	chr6_154495501_-	SINE	Alu	Name=AluJr
ADediting_1241935	chr6_154495507_-	SINE	Alu	Name=AluJr
ADediting_1241936	chr6_154495509_-	SINE	Alu	Name=AluJr
ADediting_1241937	chr6_154495594_-	SINE	Alu	Name=AluJr
ADediting_1241938	chr6_154495607_-	SINE	Alu	Name=AluJr
ADediting_1241939	chr6_154495642_-	SINE	Alu	Name=AluJr
ADediting_1241940	chr6_154495647_-	SINE	Alu	Name=AluJr
ADediting_1241941	chr6_154495664_-	SINE	Alu	Name=AluJr
ADediting_1241942	chr6_154497159_-	SINE	Alu	Name=AluJb
ADediting_1241943	chr6_154497176_-	SINE	Alu	Name=AluJb
ADediting_1241944	chr6_154497276_-	SINE	Alu	Name=AluJb
ADediting_1241945	chr6_154497279_-	SINE	Alu	Name=AluJb
ADediting_1241946	chr6_154497341_-	SINE	Alu	Name=AluJb
ADediting_1241947	chr6_154499737_-	SINE	Alu	Name=AluJo
ADediting_1241948	chr6_154499745_-	SINE	Alu	Name=AluJo
ADediting_1241950	chr6_154505626_-	SINE	Alu	Name=AluY
ADediting_1241951	chr6_154505636_-	SINE	Alu	Name=AluY
ADediting_1241952	chr6_154505703_-	SINE	Alu	Name=AluY
ADediting_1582937	chr6_154471428_-	SINE	Alu	Name=AluSz
ADediting_1660415	chr6_154407639_-	SINE	Alu	Name=AluJb

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RNA A-to-I editing events in the alternative splicing sites for CNKSR3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CNKSR3

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for CNKSR3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CNKSR3

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1241751	chr6_154390454_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3913-3p	chr6	154390449	154390455	7mer-m8	154390448	154390469	149	-12.08
ADediting_1241752	chr6_154390458_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6800-3p	chr6	154390456	154390462	7mer-m8	154390455	154390475	154	-16.05
ADediting_1241756	chr6_154391372_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-140-3p	chr6	154391370	154391376	7mer-m8	154391369	154391392	149	-25.7
ADediting_1241756	chr6_154391372_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4786-5p	chr6	154391366	154391373	8mer-1a	154391366	154391387	147	-20.64
ADediting_1241757	chr6_154391382_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4258	chr6	154391380	154391386	7mer-m8	154391379	154391395	156	-25.27
ADediting_1241757	chr6_154391382_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4707-3p	chr6	154391379	154391385	7mer-m8	154391378	154391400	147	-24.12
ADediting_1241758	chr6_154391428_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3158-3p	chr6	154391424	154391430	7mer-m8	154391423	154391448	153	-20.9
ADediting_1241759	chr6_154391505_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-8052	chr6	154391500	154391506	7mer-1a	154391500	154391518	140	-24.15
ADediting_1241762	chr6_154391967_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6813-3p	chr6	154391965	154391971	7mer-m8	154391964	154391984	140	-11.65
ADediting_1241764	chr6_154391990_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3619-3p	chr6	154391987	154391993	7mer-m8	154391986	154392007	140	-13.93
ADediting_1241764	chr6_154391990_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-591	chr6	154391988	154391994	7mer-m8	154391987	154392006	153	-16.12
ADediting_1241766	chr6_154392044_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6512-5p	chr6	154392042	154392048	7mer-m8	154392041	154392062	164	-16.49
ADediting_1241769	chr6_154392066_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7978	chr6	154392066	154392072	7mer-m8	154392065	154392083	143	-16.35
ADediting_1241770	chr6_154392088_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-17-3p	chr6	154392085	154392091	7mer-m8	154392084	154392106	154	-20.36
ADediting_1241771	chr6_154392098_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4691-3p	chr6	154392094	154392100	7mer-m8	154392093	154392117	145	-26.18
ADediting_1241773	chr6_154393042_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1207-3p	chr6	154393042	154393048	7mer-m8	154393041	154393058	140	-12.56
ADediting_1241773	chr6_154393042_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-646	chr6	154393040	154393046	7mer-m8	154393039	154393057	145	-16.24
ADediting_1241774	chr6_154393051_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-8052	chr6	154393046	154393052	7mer-1a	154393046	154393066	141	-21.06
ADediting_1241775	chr6_154393052_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-513a-5p	chr6	154393051	154393057	7mer-m8	154393050	154393067	140	-18.21
ADediting_1241775	chr6_154393052_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-638	chr6	154393046	154393052	7mer-1a	154393046	154393070	147	-31.15
ADediting_1241776	chr6_154393078_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3190-5p	chr6	154393073	154393079	7mer-m8	154393072	154393091	143	-16.24
ADediting_1241776	chr6_154393078_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-548s	chr6	154393074	154393080	7mer-m8	154393073	154393095	145	-11.19
ADediting_1241777	chr6_154393093_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-222-5p	chr6	154393091	154393098	8mer-1a	154393091	154393111	141	-9.81
ADediting_1241777	chr6_154393093_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-30a-3p	chr6	154393089	154393096	8mer-1a	154393089	154393113	154	-11.94
ADediting_1241777	chr6_154393093_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-30d-3p	chr6	154393089	154393096	8mer-1a	154393089	154393111	153	-12.1
ADediting_1241777	chr6_154393093_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-30e-3p	chr6	154393089	154393096	8mer-1a	154393089	154393113	154	-14
ADediting_1241777	chr6_154393093_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-936	chr6	154393092	154393099	8mer-1a	154393092	154393114	159	-22.75
ADediting_1241778	chr6_154393102_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-483-5p	chr6	154393099	154393105	7mer-m8	154393098	154393119	140	-14.01
ADediting_1241780	chr6_154393164_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-18a-3p	chr6	154393159	154393165	7mer-m8	154393158	154393178	147	-21.43
ADediting_1241780	chr6_154393164_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3176	chr6	154393164	154393170	7mer-m8	154393163	154393181	140	-15.24
ADediting_1241780	chr6_154393164_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3922-3p	chr6	154393164	154393170	7mer-m8	154393163	154393184	141	-19.73
ADediting_1241780	chr6_154393164_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-874-3p	chr6	154393160	154393166	7mer-m8	154393159	154393182	156	-31.64
ADediting_1241782	chr6_154393186_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1183	chr6	154393185	154393191	7mer-m8	154393184	154393210	159	-24.32
ADediting_1241782	chr6_154393186_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3199	chr6	154393181	154393188	8mer-1a	154393181	154393200	149	-18.17
ADediting_1241782	chr6_154393186_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-8052	chr6	154393181	154393188	8mer-1a	154393181	154393202	155	-26.73
ADediting_1241783	chr6_154393189_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3665	chr6	154393187	154393194	8mer-1a	154393187	154393204	151	-20.95
ADediting_1241783	chr6_154393189_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3934-5p	chr6	154393189	154393195	7mer-m8	154393188	154393210	155	-23.08
ADediting_1241784	chr6_154393193_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6806-5p	chr6	154393187	154393193	7mer-1a	154393187	154393212	145	-29.14
ADediting_1241785	chr6_154395808_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4284	chr6	154395804	154395810	7mer-m8	154395803	154395820	151	-19.71
ADediting_1241785	chr6_154395808_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4437	chr6	154395802	154395809	8mer-1a	154395802	154395822	145	-18.85
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3176	chr6	154395943	154395949	7mer-m8	154395942	154395960	156	-24.97
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3922-3p	chr6	154395943	154395949	7mer-m8	154395942	154395963	150	-20.02
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6878-3p	chr6	154395944	154395950	7mer-m8	154395943	154395963	148	-24.79
ADediting_1241789	chr6_154396872_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-324-3p	chr6	154396872	154396878	7mer-m8	154396871	154396891	150	-24.19
ADediting_1241789	chr6_154396872_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6075	chr6	154396867	154396874	8mer-1a	154396867	154396887	146	-23.04
ADediting_1241791	chr6_154396938_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-140-3p	chr6	154396936	154396942	7mer-m8	154396935	154396958	148	-28.72
ADediting_1241792	chr6_154397001_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-412-3p	chr6	154397001	154397007	7mer-m8	154397000	154397022	151	-19.78
ADediting_1241792	chr6_154397001_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4508	chr6	154396996	154397002	7mer-m8	154396995	154397010	141	-24.29
ADediting_1241792	chr6_154397001_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6754-3p	chr6	154397001	154397007	7mer-m8	154397000	154397020	146	-16.46
ADediting_1241795	chr6_154398996_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3622a-3p	chr6	154398992	154398999	8mer-1a	154398992	154399013	148	-20.98
ADediting_1241795	chr6_154398996_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3622b-3p	chr6	154398992	154398999	8mer-1a	154398992	154399011	155	-22.92
ADediting_1241796	chr6_154399040_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-324-3p	chr6	154399037	154399043	7mer-m8	154399036	154399058	148	-24.1
ADediting_1241796	chr6_154399040_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4793-3p	chr6	154399040	154399046	7mer-m8	154399039	154399061	149	-19.36
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-2276-5p	chr6	154404229	154404236	8mer-1a	154404229	154404250	168	-29.59
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4469	chr6	154404227	154404234	8mer-1a	154404227	154404245	156	-30.16
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4685-3p	chr6	154404227	154404233	7mer-1a	154404227	154404249	147	-27.37
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-642a-5p	chr6	154404229	154404235	7mer-m8	154404228	154404249	140	-14.04
ADediting_1241800	chr6_154404268_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4638-5p	chr6	154404265	154404272	8mer-1a	154404265	154404282	146	-17.91
ADediting_1241802	chr6_154404338_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-140-3p	chr6	154404336	154404342	7mer-m8	154404335	154404355	155	-25.24
ADediting_1241803	chr6_154404385_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3158-3p	chr6	154404381	154404387	7mer-m8	154404380	154404400	150	-20.06
ADediting_1241803	chr6_154404385_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-412-3p	chr6	154404385	154404391	7mer-m8	154404384	154404406	153	-17.3
ADediting_1241803	chr6_154404385_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6754-3p	chr6	154404385	154404391	7mer-m8	154404384	154404404	144	-15.76
ADediting_1241804	chr6_154404393_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1306-3p	chr6	154404393	154404399	7mer-m8	154404392	154404409	152	-23.71
ADediting_1241805	chr6_154404395_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3190-5p	chr6	154404395	154404401	7mer-m8	154404394	154404413	152	-19.64
ADediting_1241806	chr6_154404410_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-12113	chr6	154404410	154404416	7mer-m8	154404409	154404429	147	-20.01
ADediting_1241806	chr6_154404410_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4539	chr6	154404410	154404416	7mer-m8	154404409	154404428	147	-19.1
ADediting_1241808	chr6_154404443_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-10392-3p	chr6	154404442	154404449	8mer-1a	154404442	154404464	152	-22.2
ADediting_1241812	chr6_154404587_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3189-3p	chr6	154404586	154404592	7mer-m8	154404585	154404604	149	-22.03
ADediting_1241812	chr6_154404587_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6813-3p	chr6	154404585	154404591	7mer-m8	154404584	154404604	140	-13.54
ADediting_1241813	chr6_154404588_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-326	chr6	154404586	154404592	7mer-m8	154404585	154404604	140	-15.99
ADediting_1241813	chr6_154404588_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-330-5p	chr6	154404586	154404592	7mer-m8	154404585	154404608	144	-21.61
ADediting_1241813	chr6_154404588_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4314	chr6	154404587	154404593	7mer-m8	154404586	154404604	143	-20.96
ADediting_1241813	chr6_154404588_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-514a-5p	chr6	154404585	154404591	7mer-m8	154404584	154404607	150	-19.22
ADediting_1241814	chr6_154404597_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6089	chr6	154404592	154404598	7mer-m8	154404591	154404613	164	-39.87
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3192-5p	chr6	154404620	154404626	7mer-m8	154404619	154404644	159	-24.15
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4505	chr6	154404618	154404624	7mer-m8	154404617	154404637	146	-24.27
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-485-5p	chr6	154404615	154404622	8mer-1a	154404615	154404635	152	-18.51
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5787	chr6	154404618	154404624	7mer-m8	154404617	154404636	145	-22.16
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6884-5p	chr6	154404615	154404622	8mer-1a	154404615	154404636	153	-15.82
ADediting_1241816	chr6_154404621_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6771-5p	chr6	154404620	154404626	7mer-m8	154404619	154404639	148	-26.14
ADediting_1241820	chr6_154404720_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-449b-3p	chr6	154404717	154404723	7mer-m8	154404716	154404737	140	-17.16
ADediting_1241820	chr6_154404720_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4691-3p	chr6	154404716	154404722	7mer-m8	154404715	154404742	150	-26.36
ADediting_1241821	chr6_154404732_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6089	chr6	154404727	154404733	7mer-m8	154404726	154404749	164	-39.99
ADediting_1241822	chr6_154404749_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6078	chr6	154404745	154404752	8mer-1a	154404745	154404763	149	-20.55
ADediting_1241824	chr6_154404756_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6125	chr6	154404756	154404762	7mer-m8	154404755	154404774	157	-27.23
ADediting_1241825	chr6_154404769_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-17-3p	chr6	154404769	154404775	7mer-m8	154404768	154404789	150	-16.6
ADediting_1241825	chr6_154404769_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-485-5p	chr6	154404765	154404771	7mer-m8	154404764	154404787	156	-17.86
ADediting_1241825	chr6_154404769_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6884-5p	chr6	154404765	154404771	7mer-m8	154404764	154404787	154	-24.34
ADediting_1241826	chr6_154404780_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4537	chr6	154404775	154404782	8mer-1a	154404775	154404797	151	-25.6
ADediting_1241827	chr6_154404785_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3672	chr6	154404780	154404786	7mer-m8	154404779	154404801	140	-13.93
ADediting_1241827	chr6_154404785_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6864-3p	chr6	154404780	154404786	7mer-m8	154404779	154404798	149	-15.65
ADediting_1241827	chr6_154404785_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-873-3p	chr6	154404780	154404787	8mer-1a	154404780	154404806	141	-23.1

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1241754	chr6_154390903_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-8062	chr6	154390901	154390907	7mer-m8	154390900	154390920	141	-10.43
ADediting_1241755	chr6_154391326_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1343-3p	chr6	154391323	154391329	7mer-m8	154391322	154391345	154	-29.7
ADediting_1241755	chr6_154391326_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6742-3p	chr6	154391323	154391330	8mer-1a	154391323	154391344	153	-20.71
ADediting_1241755	chr6_154391326_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6783-3p	chr6	154391323	154391329	7mer-m8	154391322	154391342	151	-19.98
ADediting_1241756	chr6_154391372_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7151-3p	chr6	154391372	154391378	7mer-m8	154391371	154391391	140	-16.94
ADediting_1241757	chr6_154391382_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4722-3p	chr6	154391380	154391386	7mer-m8	154391379	154391402	154	-21.63
ADediting_1241757	chr6_154391382_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4763-5p	chr6	154391379	154391385	7mer-m8	154391378	154391397	149	-24.71
ADediting_1241757	chr6_154391382_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6727-3p	chr6	154391380	154391386	7mer-m8	154391379	154391398	153	-21.09
ADediting_1241758	chr6_154391428_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6823-5p	chr6	154391423	154391429	7mer-m8	154391422	154391442	143	-15.48
ADediting_1241759	chr6_154391505_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-10399-5p	chr6	154391504	154391510	7mer-m8	154391503	154391523	140	-10.39
ADediting_1241759	chr6_154391505_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5089-5p	chr6	154391500	154391506	7mer-m8	154391499	154391521	153	-16.58
ADediting_1241759	chr6_154391505_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6504-3p	chr6	154391504	154391510	7mer-m8	154391503	154391524	144	-7.7
ADediting_1241760	chr6_154391949_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6514-3p	chr6	154391949	154391955	7mer-m8	154391948	154391968	155	-17.54
ADediting_1241760	chr6_154391949_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6847-3p	chr6	154391944	154391950	7mer-m8	154391943	154391965	153	-22.19
ADediting_1241763	chr6_154391977_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4478	chr6	154391973	154391979	7mer-m8	154391972	154391987	149	-19.54
ADediting_1241763	chr6_154391977_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4649-3p	chr6	154391976	154391982	7mer-m8	154391975	154391995	145	-15.74
ADediting_1241763	chr6_154391977_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7160-5p	chr6	154391975	154391981	7mer-m8	154391974	154391996	150	-23.82
ADediting_1241769	chr6_154392066_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4453	chr6	154392062	154392069	8mer-1a	154392062	154392081	152	-16.44
ADediting_1241770	chr6_154392088_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-20b-3p	chr6	154392085	154392091	7mer-m8	154392084	154392106	153	-18.69
ADediting_1241771	chr6_154392098_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5690	chr6	154392094	154392100	7mer-m8	154392093	154392113	145	-16.75
ADediting_1241772	chr6_154392110_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4649-3p	chr6	154392109	154392115	7mer-m8	154392108	154392128	140	-14.11
ADediting_1241772	chr6_154392110_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7160-5p	chr6	154392108	154392114	7mer-m8	154392107	154392127	146	-20.9
ADediting_1241773	chr6_154393042_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-562	chr6	154393039	154393045	7mer-m8	154393038	154393057	150	-12.74
ADediting_1241773	chr6_154393042_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5697	chr6	154393038	154393044	7mer-m8	154393037	154393059	149	-18.33
ADediting_1241774	chr6_154393051_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-10399-5p	chr6	154393050	154393056	7mer-m8	154393049	154393068	145	-12.5
ADediting_1241774	chr6_154393051_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5089-5p	chr6	154393046	154393052	7mer-m8	154393045	154393063	146	-13.74
ADediting_1241774	chr6_154393051_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6504-3p	chr6	154393050	154393056	7mer-m8	154393049	154393070	145	-13.69
ADediting_1241775	chr6_154393052_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-10399-5p	chr6	154393050	154393056	7mer-m8	154393049	154393068	145	-12.5
ADediting_1241775	chr6_154393052_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6504-3p	chr6	154393050	154393056	7mer-m8	154393049	154393070	145	-13.69
ADediting_1241776	chr6_154393078_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4735-5p	chr6	154393077	154393083	7mer-m8	154393076	154393097	140	-5.48
ADediting_1241776	chr6_154393078_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4794	chr6	154393073	154393079	7mer-m8	154393072	154393093	140	-12.3
ADediting_1241776	chr6_154393078_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-664a-5p	chr6	154393073	154393079	7mer-m8	154393072	154393095	141	-13.02
ADediting_1241778	chr6_154393102_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3170	chr6	154393102	154393108	7mer-m8	154393101	154393122	140	-13.8
ADediting_1241778	chr6_154393102_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6855-5p	chr6	154393102	154393108	7mer-m8	154393101	154393125	145	-18.79
ADediting_1241778	chr6_154393102_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6890-5p	chr6	154393101	154393107	7mer-m8	154393100	154393120	142	-13.42
ADediting_1241779	chr6_154393160_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6747-3p	chr6	154393158	154393164	7mer-m8	154393157	154393178	154	-23.03
ADediting_1241781	chr6_154393165_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6878-3p	chr6	154393164	154393171	8mer-1a	154393164	154393184	142	-14.14
ADediting_1241782	chr6_154393186_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-508-3p	chr6	154393184	154393190	7mer-m8	154393183	154393205	145	-13.07
ADediting_1241782	chr6_154393186_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5089-5p	chr6	154393181	154393187	7mer-m8	154393180	154393202	148	-12.4
ADediting_1241783	chr6_154393189_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-508-3p	chr6	154393184	154393190	7mer-m8	154393183	154393205	145	-13.07
ADediting_1241785	chr6_154395808_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-27a-5p	chr6	154395802	154395809	8mer-1a	154395802	154395825	153	-18.41
ADediting_1241786	chr6_154395859_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1200	chr6	154395856	154395862	7mer-m8	154395855	154395876	141	-18.61
ADediting_1241786	chr6_154395859_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6869-5p	chr6	154395859	154395865	7mer-m8	154395858	154395881	152	-20.09
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3663-5p	chr6	154395943	154395949	7mer-m8	154395942	154395961	144	-20.73
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6131	chr6	154395942	154395948	7mer-m8	154395941	154395959	140	-16.72
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6843-3p	chr6	154395944	154395950	7mer-m8	154395943	154395962	152	-20.01
ADediting_1241788	chr6_154395947_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6848-3p	chr6	154395944	154395950	7mer-m8	154395943	154395960	142	-15.32
ADediting_1241789	chr6_154396872_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1304-3p	chr6	154396871	154396877	7mer-m8	154396870	154396891	147	-20.71
ADediting_1241789	chr6_154396872_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4284	chr6	154396869	154396875	7mer-m8	154396868	154396885	144	-12.71
ADediting_1241790	chr6_154396876_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1304-3p	chr6	154396871	154396877	7mer-m8	154396870	154396891	147	-20.71
ADediting_1241790	chr6_154396876_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-2276-3p	chr6	154396875	154396881	7mer-m8	154396874	154396895	145	-17
ADediting_1241791	chr6_154396938_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7151-3p	chr6	154396938	154396944	7mer-m8	154396937	154396957	140	-17.27
ADediting_1241791	chr6_154396938_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-8052	chr6	154396932	154396938	7mer-1a	154396932	154396952	141	-23.11
ADediting_1241792	chr6_154397001_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-193b-5p	chr6	154396997	154397003	7mer-m8	154396996	154397017	142	-17.8
ADediting_1241793	chr6_154397011_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3152-3p	chr6	154397008	154397014	7mer-m8	154397007	154397027	145	-18.08
ADediting_1241794	chr6_154397035_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-378a-5p	chr6	154397032	154397038	7mer-m8	154397031	154397053	148	-22.63
ADediting_1241795	chr6_154398996_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3614-5p	chr6	154398992	154398998	7mer-1a	154398992	154399015	151	-21.52
ADediting_1241796	chr6_154399040_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-32-5p	chr6	154399039	154399045	7mer-m8	154399038	154399059	144	-12.53
ADediting_1241796	chr6_154399040_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-363-3p	chr6	154399039	154399045	7mer-m8	154399038	154399059	147	-16.12
ADediting_1241796	chr6_154399040_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-92a-3p	chr6	154399039	154399045	7mer-m8	154399038	154399055	155	-26.92
ADediting_1241797	chr6_154403242_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3675-3p	chr6	154403237	154403243	7mer-m8	154403236	154403257	145	-12.58
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1237-3p	chr6	154404229	154404236	8mer-1a	154404229	154404247	144	-22.2
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3182	chr6	154404231	154404237	7mer-m8	154404230	154404246	147	-12.69
ADediting_1241799	chr6_154404232_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4743-3p	chr6	154404232	154404238	7mer-m8	154404231	154404254	143	-17.32
ADediting_1241801	chr6_154404302_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-8062	chr6	154404300	154404306	7mer-m8	154404299	154404319	141	-10.43
ADediting_1241803	chr6_154404385_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6823-5p	chr6	154404380	154404386	7mer-m8	154404379	154404399	143	-17.07
ADediting_1241804	chr6_154404393_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4716-5p	chr6	154404390	154404396	7mer-m8	154404389	154404410	140	-11.3
ADediting_1241804	chr6_154404393_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4781-3p	chr6	154404392	154404398	7mer-m8	154404391	154404409	144	-13.86
ADediting_1241805	chr6_154404395_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4716-5p	chr6	154404390	154404396	7mer-m8	154404389	154404410	140	-11.3
ADediting_1241805	chr6_154404395_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4781-3p	chr6	154404392	154404398	7mer-m8	154404391	154404409	144	-13.86
ADediting_1241807	chr6_154404419_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4750-3p	chr6	154404418	154404424	7mer-m8	154404417	154404438	140	-24.23
ADediting_1241808	chr6_154404443_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-212-5p	chr6	154404440	154404446	7mer-m8	154404439	154404463	154	-22.09
ADediting_1241809	chr6_154404464_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-10399-5p	chr6	154404463	154404469	7mer-m8	154404462	154404483	144	-11.77
ADediting_1241813	chr6_154404588_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-887-5p	chr6	154404587	154404594	8mer-1a	154404587	154404606	143	-13.53
ADediting_1241814	chr6_154404597_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4478	chr6	154404593	154404599	7mer-m8	154404592	154404609	147	-24.64
ADediting_1241814	chr6_154404597_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4649-3p	chr6	154404596	154404602	7mer-m8	154404595	154404615	153	-17.88
ADediting_1241814	chr6_154404597_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-485-5p	chr6	154404592	154404598	7mer-m8	154404591	154404616	150	-21.73
ADediting_1241814	chr6_154404597_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6884-5p	chr6	154404592	154404598	7mer-m8	154404591	154404614	152	-23.75
ADediting_1241814	chr6_154404597_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7160-5p	chr6	154404595	154404601	7mer-m8	154404594	154404613	151	-22.37
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-377-5p	chr6	154404615	154404622	8mer-1a	154404615	154404637	141	-12.83
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4425	chr6	154404619	154404625	7mer-m8	154404618	154404637	149	-16.96
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6086	chr6	154404615	154404622	8mer-1a	154404615	154404634	155	-23.63
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-887-5p	chr6	154404620	154404626	7mer-m8	154404619	154404636	147	-14.86
ADediting_1241815	chr6_154404620_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-92a-1-5p	chr6	154404618	154404624	7mer-m8	154404617	154404637	149	-17.72
ADediting_1241816	chr6_154404621_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-377-5p	chr6	154404615	154404622	8mer-1a	154404615	154404637	141	-12.83
ADediting_1241816	chr6_154404621_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4425	chr6	154404619	154404625	7mer-m8	154404618	154404637	149	-16.96
ADediting_1241816	chr6_154404621_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6086	chr6	154404615	154404622	8mer-1a	154404615	154404634	155	-23.63
ADediting_1241816	chr6_154404621_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-887-5p	chr6	154404620	154404626	7mer-m8	154404619	154404636	147	-14.86
ADediting_1241816	chr6_154404621_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-92a-1-5p	chr6	154404618	154404624	7mer-m8	154404617	154404637	149	-17.72
ADediting_1241818	chr6_154404652_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3606-5p	chr6	154404649	154404655	7mer-m8	154404648	154404668	149	-12.36
ADediting_1241818	chr6_154404652_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6073	chr6	154404648	154404654	7mer-m8	154404647	154404666	146	-15.07
ADediting_1241820	chr6_154404720_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-222-3p	chr6	154404718	154404724	7mer-m8	154404717	154404736	145	-19.14
ADediting_1241820	chr6_154404720_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5690	chr6	154404716	154404722	7mer-m8	154404715	154404735	140	-14.51
ADediting_1241821	chr6_154404732_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4478	chr6	154404728	154404734	7mer-m8	154404727	154404742	149	-25.05
ADediting_1241821	chr6_154404732_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4649-3p	chr6	154404731	154404737	7mer-m8	154404730	154404750	140	-14.11
ADediting_1241821	chr6_154404732_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-7160-5p	chr6	154404730	154404736	7mer-m8	154404729	154404749	146	-20.4
ADediting_1241824	chr6_154404756_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-490-3p	chr6	154404752	154404758	7mer-m8	154404751	154404772	151	-16.16
ADediting_1241824	chr6_154404756_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-619-3p	chr6	154404753	154404759	7mer-m8	154404752	154404774	143	-14.93
ADediting_1241825	chr6_154404769_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-377-5p	chr6	154404765	154404771	7mer-m8	154404764	154404787	154	-17.36
ADediting_1241825	chr6_154404769_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6086	chr6	154404765	154404771	7mer-m8	154404764	154404783	150	-23.6
ADediting_1241825	chr6_154404769_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-6516-5p	chr6	154404769	154404775	7mer-m8	154404768	154404787	148	-12.72
ADediting_1241826	chr6_154404780_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-3160-3p	chr6	154404775	154404782	8mer-1a	154404775	154404796	152	-19.51
ADediting_1241827	chr6_154404785_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5186	chr6	154404780	154404787	8mer-1a	154404780	154404800	140	-10.22

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1097295	chr3_85385762_+	ENSG00000153721.19	ENST00000479339.5	CNKSR3-204	hsa-miR-5688	chr6	154406112	154406118	7mer-m8	154406111	154406133	150	-12.95
ADediting_1097295	chr3_85385762_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5688	chr6	154400610	154400616	7mer-m8	154400609	154400632	147	-11.1
ADediting_1097295	chr3_85385762_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5688	chr6	154406112	154406118	7mer-m8	154406111	154406133	150	-12.95
ADediting_1337757	chr7_5495852_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-589-3p	chr6	154394492	154394498	7mer-m8	154394491	154394513	145	-18
ADediting_1337757	chr7_5495852_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-589-3p	chr6	154395027	154395033	7mer-m8	154395026	154395050	151	-22.5
ADediting_1337757	chr7_5495852_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-589-3p	chr6	154396524	154396530	7mer-m8	154396523	154396546	156	-18.63
ADediting_1391023	chr8_140732605_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-151a-3p	chr6	154389592	154389598	7mer-m8	154389591	154389611	147	-14.09
ADediting_1471003	chr9_63819626_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4477b	chr6	154397244	154397250	7mer-m8	154397243	154397264	148	-14.93
ADediting_1471003	chr9_63819626_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4477b	chr6	154398620	154398627	8mer-1a	154398620	154398646	146	-12.53
ADediting_1535951	chr14_100874558_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-337-3p	chr6	154396251	154396258	8mer-1a	154396251	154396269	145	-12.48
ADediting_1535951	chr14_100874558_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-337-3p	chr6	154396260	154396266	7mer-m8	154396251	154396269	145	-12.48
ADediting_1535953	chr14_101045971_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-381-3p	chr6	154388634	154388641	8mer-1a	154388634	154388658	155	-18.28
ADediting_1535954	chr14_101045974_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-381-3p	chr6	154402095	154402101	7mer-m8	154402094	154402115	141	-11.66
ADediting_1631458	chr19_40282624_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-641	chr6	154395570	154395576	7mer-m8	154395569	154395594	149	-16.03
ADediting_1643790	chr3_121049689_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5682	chr6	154401309	154401316	8mer-1a	154401309	154401329	162	-25.13
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154389315	154389321	7mer-m8	154389314	154389335	146	-11.09
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154393406	154393412	7mer-m8	154393405	154393425	148	-8.91
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154401692	154401698	7mer-m8	154401691	154401712	149	-8.37
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154402827	154402833	7mer-m8	154402826	154402847	150	-5.28
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154403087	154403093	7mer-m8	154403086	154403106	148	-5.22
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154404364	154404370	7mer-m8	154404363	154404384	152	-10.43
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154404960	154404966	7mer-m8	154404959	154404981	142	-5.86
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154405165	154405172	8mer-1a	154405165	154405186	158	-13.68
ADediting_98288	chr1_32086990_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5585-3p	chr6	154401275	154401281	7mer-m8	154401274	154401298	147	-14.92

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1097295	chr3_85385762_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5688	chr6	154387732	154387738	7mer-m8	154387731	154387752	152	-10.33
ADediting_1097295	chr3_85385762_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5688	chr6	154389978	154389984	7mer-m8	154389977	154389998	151	-13.05
ADediting_1337757	chr7_5495852_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-589-3p	chr6	154397932	154397938	7mer-m8	154397931	154397955	144	-10.63
ADediting_1337758	chr7_5495892_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-589-5p	chr6	154394847	154394853	7mer-m8	154394846	154394868	142	-13.07
ADediting_1471003	chr9_63819626_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4477b	chr6	154396763	154396770	8mer-1a	154396763	154396787	148	-7.73
ADediting_1471003	chr9_63819626_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4477b	chr6	154402086	154402092	7mer-m8	154402085	154402107	154	-9
ADediting_1471004	chr9_63819627_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4477b	chr6	154396763	154396770	8mer-1a	154396763	154396787	148	-7.73
ADediting_1471004	chr9_63819627_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4477b	chr6	154402086	154402092	7mer-m8	154402085	154402107	154	-9
ADediting_1535953	chr14_101045971_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-381-3p	chr6	154394604	154394610	7mer-m8	154394603	154394625	145	-8.94
ADediting_1535953	chr14_101045971_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-381-3p	chr6	154401149	154401155	7mer-1a	154401149	154401171	147	-16.69
ADediting_1535954	chr14_101045974_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-381-3p	chr6	154394604	154394610	7mer-m8	154394603	154394625	145	-8.94
ADediting_1535954	chr14_101045974_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-381-3p	chr6	154401149	154401155	7mer-1a	154401149	154401171	147	-16.69
ADediting_1556067	chr19_40282625_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-641	chr6	154389917	154389923	7mer-m8	154389916	154389939	141	-11.02
ADediting_1556067	chr19_40282625_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-641	chr6	154401533	154401539	7mer-1a	154401533	154401555	155	-19.83
ADediting_1596844	chr1_162342605_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-556-3p	chr6	154400958	154400964	7mer-m8	154400957	154400978	145	-7.73
ADediting_1596844	chr1_162342605_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-556-3p	chr6	154403012	154403018	7mer-m8	154403011	154403034	154	-13.48
ADediting_1631458	chr19_40282624_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-641	chr6	154389917	154389923	7mer-m8	154389916	154389939	141	-11.02
ADediting_1631458	chr19_40282624_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-641	chr6	154401533	154401539	7mer-1a	154401533	154401555	155	-19.83
ADediting_286380	chr11_79422188_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5579-3p	chr6	154387835	154387841	7mer-m8	154387834	154387854	152	-10.32
ADediting_286380	chr11_79422188_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5579-3p	chr6	154390712	154390718	7mer-m8	154390711	154390732	155	-13.24
ADediting_286380	chr11_79422188_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-5579-3p	chr6	154397304	154397311	8mer-1a	154397304	154397325	140	-11.27
ADediting_291761	chr11_93733708_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1304-3p	chr6	154393283	154393289	7mer-m8	154393282	154393309	150	-22.64
ADediting_291761	chr11_93733708_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1304-3p	chr6	154396871	154396877	7mer-m8	154396870	154396891	147	-20.71
ADediting_291761	chr11_93733708_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-1304-3p	chr6	154405920	154405927	8mer-1a	154405920	154405941	140	-13.61
ADediting_496066	chr15_66496985_-	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4512	chr6	154399385	154399391	7mer-m8	154399384	154399405	142	-14.38
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154396447	154396453	7mer-m8	154396446	154396467	152	-7.12
ADediting_843620	chr2_207754818_+	ENSG00000153721.19	ENST00000607772.6	CNKSR3-205	hsa-miR-4775	chr6	154396480	154396487	8mer-1a	154396480	154396502	149	-9.12

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CNKSR3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1241750	ENST00000607772.6	chr6_154388906_-	19687	-7436.90	-7437.30	-7524.10
ADediting_1241751	ENST00000607772.6	chr6_154390454_-	18139	-7437.40	-7437.30	-7524.10
ADediting_1241752	ENST00000607772.6	chr6_154390458_-	18135	-7443.90	-7437.30	-7524.10
ADediting_1241753	ENST00000607772.6	chr6_154390461_-	18132	-7436.40	-7437.30	-7524.10
ADediting_1241754	ENST00000607772.6	chr6_154390903_-	17690	-7442.70	-7437.30	-7524.10
ADediting_1241755	ENST00000607772.6	chr6_154391326_-	17267	-7436.60	-7437.30	-7524.10
ADediting_1241756	ENST00000607772.6	chr6_154391372_-	17221	-7437.00	-7437.30	-7524.10
ADediting_1241757	ENST00000607772.6	chr6_154391382_-	17211	-7440.90	-7437.30	-7524.10
ADediting_1241758	ENST00000607772.6	chr6_154391428_-	17165	-7437.30	-7437.30	-7524.10
ADediting_1241759	ENST00000607772.6	chr6_154391505_-	17088	-7437.30	-7437.30	-7524.10
ADediting_1241760	ENST00000607772.6	chr6_154391949_-	16644	-7443.10	-7437.30	-7524.10
ADediting_1241761	ENST00000607772.6	chr6_154391955_-	16638	-7437.30	-7437.30	-7524.10
ADediting_1241762	ENST00000607772.6	chr6_154391967_-	16626	-7437.00	-7437.30	-7524.10
ADediting_1241763	ENST00000607772.6	chr6_154391977_-	16616	-7443.50	-7437.30	-7524.10
ADediting_1241764	ENST00000607772.6	chr6_154391990_-	16603	-7436.70	-7437.30	-7524.10
ADediting_1241765	ENST00000607772.6	chr6_154392027_-	16566	-7443.10	-7437.30	-7524.10
ADediting_1241766	ENST00000607772.6	chr6_154392044_-	16549	-7437.00	-7437.30	-7524.10
ADediting_1241767	ENST00000607772.6	chr6_154392046_-	16547	-7443.50	-7437.30	-7524.10
ADediting_1241768	ENST00000607772.6	chr6_154392047_-	16546	-7437.00	-7437.30	-7524.10
ADediting_1241769	ENST00000607772.6	chr6_154392066_-	16527	-7440.80	-7437.30	-7524.10
ADediting_1241770	ENST00000607772.6	chr6_154392088_-	16505	-7437.30	-7437.30	-7524.10
ADediting_1241771	ENST00000607772.6	chr6_154392098_-	16495	-7437.00	-7437.30	-7524.10
ADediting_1241772	ENST00000607772.6	chr6_154392110_-	16483	-7436.60	-7437.30	-7524.10
ADediting_1241773	ENST00000607772.6	chr6_154393042_-	15551	-7437.30	-7437.30	-7524.10
ADediting_1241774	ENST00000607772.6	chr6_154393051_-	15542	-7437.30	-7437.30	-7524.10
ADediting_1241775	ENST00000607772.6	chr6_154393052_-	15541	-7437.40	-7437.30	-7524.10
ADediting_1241776	ENST00000607772.6	chr6_154393078_-	15515	-7437.00	-7437.30	-7524.10
ADediting_1241777	ENST00000607772.6	chr6_154393093_-	15500	-7437.40	-7437.30	-7524.10
ADediting_1241778	ENST00000607772.6	chr6_154393102_-	15491	-7443.10	-7437.30	-7524.10
ADediting_1241779	ENST00000607772.6	chr6_154393160_-	15433	-7436.60	-7437.30	-7524.10
ADediting_1241780	ENST00000607772.6	chr6_154393164_-	15429	-7440.50	-7437.30	-7524.10
ADediting_1241781	ENST00000607772.6	chr6_154393165_-	15428	-7439.00	-7437.30	-7524.10
ADediting_1241782	ENST00000607772.6	chr6_154393186_-	15407	-7437.30	-7437.30	-7524.10
ADediting_1241783	ENST00000607772.6	chr6_154393189_-	15404	-7440.10	-7437.30	-7524.10
ADediting_1241784	ENST00000607772.6	chr6_154393193_-	15400	-7437.90	-7437.30	-7524.10
ADediting_1241785	ENST00000607772.6	chr6_154395808_-	12785	-7438.30	-7437.30	-7524.10
ADediting_1241786	ENST00000607772.6	chr6_154395859_-	12734	-7436.60	-7437.30	-7524.10
ADediting_1241787	ENST00000607772.6	chr6_154395899_-	12694	-7437.30	-7437.30	-7524.10
ADediting_1241788	ENST00000607772.6	chr6_154395947_-	12646	-7436.70	-7437.30	-7524.10
ADediting_1241789	ENST00000607772.6	chr6_154396872_-	11721	-7436.40	-7437.30	-7524.10
ADediting_1241790	ENST00000607772.6	chr6_154396876_-	11717	-7443.50	-7437.30	-7524.10
ADediting_1241791	ENST00000607772.6	chr6_154396938_-	11655	-7436.90	-7437.30	-7524.10
ADediting_1241792	ENST00000607772.6	chr6_154397001_-	11592	-7437.30	-7437.30	-7524.10
ADediting_1241793	ENST00000607772.6	chr6_154397011_-	11582	-7437.30	-7437.30	-7524.10
ADediting_1241794	ENST00000607772.6	chr6_154397035_-	11558	-7443.50	-7437.30	-7524.10
ADediting_1241795	ENST00000607772.6	chr6_154398996_-	9597	-7439.90	-7437.30	-7524.10
ADediting_1241796	ENST00000607772.6	chr6_154399040_-	9553	-7443.50	-7437.30	-7524.10
ADediting_1241797	ENST00000607772.6	chr6_154403242_-	5351	-7437.00	-7437.30	-7524.10
ADediting_1241798	ENST00000607772.6	chr6_154403286_-	5307	-7437.30	-7437.30	-7524.10
ADediting_1241799	ENST00000607772.6	chr6_154404232_-	4361	-7439.80	-7437.30	-7524.10
ADediting_1241800	ENST00000607772.6	chr6_154404268_-	4325	-7440.90	-7437.30	-7524.10
ADediting_1241801	ENST00000607772.6	chr6_154404302_-	4291	-7440.90	-7437.30	-7524.10
ADediting_1241802	ENST00000607772.6	chr6_154404338_-	4255	-7436.90	-7437.30	-7524.10
ADediting_1241803	ENST00000607772.6	chr6_154404385_-	4208	-7437.30	-7437.30	-7524.10
ADediting_1241804	ENST00000607772.6	chr6_154404393_-	4200	-7436.90	-7437.30	-7524.10
ADediting_1241805	ENST00000607772.6	chr6_154404395_-	4198	-7437.30	-7437.30	-7524.10
ADediting_1241806	ENST00000607772.6	chr6_154404410_-	4183	-7437.00	-7437.30	-7524.10
ADediting_1241807	ENST00000607772.6	chr6_154404419_-	4174	-7437.30	-7437.30	-7524.10
ADediting_1241808	ENST00000607772.6	chr6_154404443_-	4150	-7437.50	-7437.30	-7524.10
ADediting_1241809	ENST00000607772.6	chr6_154404464_-	4129	-7437.30	-7437.30	-7524.10
ADediting_1241810	ENST00000607772.6	chr6_154404481_-	4112	-7437.40	-7437.30	-7524.10
ADediting_1241811	ENST00000607772.6	chr6_154404575_-	4018	-7437.30	-7437.30	-7524.10
ADediting_1241812	ENST00000607772.6	chr6_154404587_-	4006	-7436.90	-7437.30	-7524.10
ADediting_1241813	ENST00000607772.6	chr6_154404588_-	4005	-7437.40	-7437.30	-7524.10
ADediting_1241814	ENST00000607772.6	chr6_154404597_-	3996	-7436.60	-7437.30	-7524.10
ADediting_1241815	ENST00000607772.6	chr6_154404620_-	3973	-7438.00	-7437.30	-7524.10
ADediting_1241816	ENST00000607772.6	chr6_154404621_-	3972	-7438.20	-7437.30	-7524.10
ADediting_1241817	ENST00000607772.6	chr6_154404629_-	3964	-7439.30	-7437.30	-7524.10
ADediting_1241818	ENST00000607772.6	chr6_154404652_-	3941	-7436.90	-7437.30	-7524.10
ADediting_1241819	ENST00000607772.6	chr6_154404669_-	3924	-7437.00	-7437.30	-7524.10
ADediting_1241820	ENST00000607772.6	chr6_154404720_-	3873	-7437.00	-7437.30	-7524.10
ADediting_1241821	ENST00000607772.6	chr6_154404732_-	3861	-7436.60	-7437.30	-7524.10
ADediting_1241822	ENST00000607772.6	chr6_154404749_-	3844	-7437.00	-7437.30	-7524.10
ADediting_1241823	ENST00000607772.6	chr6_154404750_-	3843	-7437.00	-7437.30	-7524.10
ADediting_1241824	ENST00000607772.6	chr6_154404756_-	3837	-7441.50	-7437.30	-7524.10
ADediting_1241825	ENST00000607772.6	chr6_154404769_-	3824	-7437.30	-7437.30	-7524.10
ADediting_1241826	ENST00000607772.6	chr6_154404780_-	3813	-7436.60	-7437.30	-7524.10
ADediting_1241827	ENST00000607772.6	chr6_154404785_-	3808	-7437.30	-7437.30	-7524.10

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CNKSR3

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	ADediting_1241890	chr6_154470353_-	0.406289786287203	0.0473306147685954	0.17660063460621	-0.0769454696198836	1.34629682949774e-16	0.446527107397802
DLPFC	ADediting_1241917	chr6_154484650_-	0.757770798259007	0.0175861683406885	0.0828818461195321	-0.098654316827188	6.61043262438847e-15	0.423274018555262

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	5.85641790087087e-12	0.377871055330298	4.66337917045767e-05	0.229109660770458	3.78401090652897e-06	0.259112335502308
AC	4.18519821428558e-39	0.706475790362287	1.62789853438049e-23	0.576204377340194	2.31457054657072e-30	0.641302468123667
PCC	0.0550137542274039	0.139074615194292	0.0595675077518223	0.13657715457156	1.88169127807213e-05	0.304208155756326
CER	5.7441712394394e-06	0.360796525107493	4.54169810990523e-05	0.326528606247714	5.09426867115978e-15	0.582817752324567
TCX	0.00123731477446878	0.261327079251836	0.000932288444843721	-0.267569785888126	9.84864492424812e-34	0.793496033447925
FP	0.000898321173218261	0.246765868761186	0.0113079925178286	0.189470860358347	5.19110781195646e-16	0.558868576214284
IFG	0.0191985443974069	0.464916571126335	0.0903204881001541	0.345902651139628	1.11546876928268e-06	0.806663481348263
PG	4.49048197262195e-11	0.458867413025818	0.0126122093908249	0.182598736243713	3.0864161167401e-08	0.3922129788106
STG	0.121380261712038	0.170325010031003	0.651715679155391	0.049967520801417	1.55446952020591e-08	0.569680879332498

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Relation with AD stages for CNKSR3

Correlation between AD stages and RNA editing frequency

Tissue

ADeditomID

position

P-val

Coeff.

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
TCX	5.41159719188388e-07	0.46412313381154
PG	1.05369677786558e-12	0.49149548149538

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RelatedDrugs for CNKSR3

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CNKSR3

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Gene summary for CNKSR3

RNA A-to-I events for CNKSR3

RNA editing positional annotations for CNKSR3 using Annovar

RNA A-to-I editing events in the alternative splicing sites for CNKSR3

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CNKSR3

Protein coding region RNA A-to-I editings for CNKSR3

The effects of the RNA editing to the miRNA binding sites for CNKSR3

The effects of the RNA editing to the stability of the RNA structures for CNKSR3

Relation with ADAR for CNKSR3

Relation with AD stages for CNKSR3

RelatedDrugs for CNKSR3

RelatedDiseases for CNKSR3

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene