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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for FAM98C |
 Gene summary |
| Gene information | Gene symbol | FAM98C | Gene ID | 147965 |
| Gene name | family with sequence similarity 98 member C | |
| Synonyms | - | |
| Cytomap | 19q13.2 | |
| Type of gene | protein-coding | |
| Description | protein FAM98C | |
| Modification date | 20200313 | |
| UniProtAcc | Q17RN3, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for FAM98C |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_748277(38403940, +), ADediting_748278(38403945, +), ADediting_748279(38404018, +), ADediting_748280(38404030, +), ADediting_748281(38404040, +), ADediting_748282(38404078, +), ADediting_748283(38404092, +), ADediting_748284(38404097, +), ADediting_748285(38404101, +), ADediting_748286(38405889, +), ADediting_748287(38405900, +), ADediting_748288(38405921, +), ADediting_748289(38405936, +), ADediting_748290(38405937, +), ADediting_748291(38405956, +), ADediting_748292(38405957, +), ADediting_748293(38405961, +), ADediting_748294(38405974, +), ADediting_748295(38405986, +), ADediting_748296(38405996, +), ADediting_748297(38406037, +), ADediting_748298(38406040, +), ADediting_748299(38406046, +), ADediting_748300(38406054, +), ADediting_748301(38406057, +), ADediting_748302(38406116, +), ADediting_748303(38406117, +), ADediting_748304(38406123, +), ADediting_748305(38406129, +), ADediting_748306(38406131, +), ADediting_748307(38406135, +), ADediting_748308(38406217, +), ADediting_748309(38406218, +), ADediting_748310(38406236, +), ADediting_748311(38406241, +), ADediting_748312(38406242, +), ADediting_748313(38406262, +), ADediting_748314(38406266, +), ADediting_748315(38406279, +), ADediting_748316(38406291, +), ADediting_748317(38406307, +), ADediting_748318(38406311, +), ADediting_748319(38406342, +), ADediting_748320(38406351, +), ADediting_748321(38406362, +), ADediting_748322(38406371, +), ADediting_748323(38406382, +), ADediting_748324(38406383, +), ADediting_748325(38406384, +), ADediting_748326(38406390, +), ADediting_748327(38406396, +), ADediting_748328(38406401, +), ADediting_748329(38406422, +), ADediting_748330(38406423, +), ADediting_748331(38406442, +), ADediting_748332(38406445, +), ADediting_748333(38406452, +), ADediting_748334(38406502, +), ADediting_748335(38406504, +), ADediting_748336(38406521, +), ADediting_748337(38406526, +), ADediting_748338(38406529, +), ADediting_748339(38406537, +), ADediting_748340(38406542, +), ADediting_748341(38406543, +), ADediting_748342(38406547, +), ADediting_748343(38406548, +), ADediting_748344(38406550, +), ADediting_748345(38406556, +), ADediting_748346(38406561, +), ADediting_748347(38406566, +), ADediting_748348(38406569, +), ADediting_748349(38406575, +), ADediting_748350(38406589, +), ADediting_748351(38406590, +), ADediting_748352(38406592, +), ADediting_748353(38406594, +), ADediting_748354(38406597, +), ADediting_748355(38406598, +), ADediting_748356(38406612, +), ADediting_748357(38406615, +), ADediting_748358(38406616, +), ADediting_748359(38406618, +), ADediting_748360(38406619, +), ADediting_748361(38406627, +), ADediting_748362(38406628, +), ADediting_748363(38406629, +), ADediting_748364(38406633, +), ADediting_748365(38406634, +), ADediting_748366(38406637, +), ADediting_748367(38406674, +), ADediting_748368(38406678, +), ADediting_748369(38406681, +), ADediting_748370(38406686, +), ADediting_748371(38406687, +), ADediting_748372(38406691, +), ADediting_748373(38406694, +), ADediting_748374(38406700, +), ADediting_748375(38406705, +), ADediting_748376(38406710, +), ADediting_748377(38406726, +), ADediting_748378(38406730, +), ADediting_748379(38406737, +), ADediting_748380(38406740, +), ADediting_748381(38406748, +), ADediting_748382(38406767, +), ADediting_748383(38406869, +), ADediting_748384(38407389, +), ADediting_748385(38407390, +), ADediting_748386(38407394, +), ADediting_748387(38407396, +), ADediting_748388(38407410, +), ADediting_748389(38407422, +), ADediting_748390(38407426, +), ADediting_748391(38407435, +), ADediting_748392(38407445, +), ADediting_748393(38407450, +), ADediting_748394(38407451, +), ADediting_748395(38407457, +), ADediting_748396(38407470, +), ADediting_748397(38407471, +), ADediting_748398(38407475, +), ADediting_748399(38407488, +), ADediting_748400(38407500, +), ADediting_748401(38407504, +), ADediting_748402(38407510, +), ADediting_748403(38407512, +), ADediting_748404(38407516, +), ADediting_748405(38407520, +), ADediting_748406(38407536, +), ADediting_748407(38407537, +), ADediting_748408(38407545, +), ADediting_748409(38407551, +), ADediting_748410(38407554, +), ADediting_748411(38407568, +), ADediting_748412(38407571, +), ADediting_748413(38407573, +), ADediting_748414(38407593, +), ADediting_748415(38407608, +), ADediting_748416(38407612, +), ADediting_748417(38407630, +), ADediting_748418(38407631, +), ADediting_748419(38407643, +), ADediting_748420(38407645, +), ADediting_748421(38407707, +), ADediting_748422(38407756, +), ADediting_748423(38407765, +), ADediting_748424(38407773, +), ADediting_748425(38407797, +), ADediting_748426(38407799, +), ADediting_748427(38407807, +), ADediting_748428(38407812, +), ADediting_748429(38407841, +), ADediting_748430(38407857, +), ADediting_748431(38407861, +), ADediting_748432(38407867, +), ADediting_748433(38407873, +), ADediting_748434(38407877, +), ADediting_748435(38407881, +), ADediting_748436(38407894, +), ADediting_748437(38407897, +), ADediting_748438(38407900, +), ADediting_748439(38407908, +), ADediting_748440(38407909, +), ADediting_748441(38407913, +), ADediting_748442(38407929, +), ADediting_748443(38407938, +), ADediting_748444(38408174, +), ADediting_748445(38408180, +), ADediting_748446(38408189, +), ADediting_748447(38408208, +), ADediting_748448(38408256, +), ADediting_748449(38408269, +), ADediting_748450(38408274, +), ADediting_748451(38408304, +), ADediting_748452(38408305, +), ADediting_748453(38408310, +), ADediting_748454(38408327, +), ADediting_748455(38408340, +), ADediting_748456(38408343, +), ADediting_748457(38408349, +), ADediting_748458(38408372, +), ADediting_748459(38408381, +), ADediting_748460(38408382, +), ADediting_748461(38408399, +), ADediting_748462(38408412, +), ADediting_748463(38408428, +), ADediting_748464(38408438, +), ADediting_748465(38408444, +), ADediting_748466(38408448, +), ADediting_748467(38408455, +), ADediting_748468(38408465, +), ADediting_748469(38408480, +), ADediting_748470(38408487, +), ADediting_748471(38408500, +), ADediting_748472(38408509, +), ADediting_748473(38408511, +), ADediting_748474(38408516, +), ADediting_1555775(38404079, +), ADediting_1555776(38405931, +), ADediting_1555777(38406314, +), ADediting_1555778(38406655, +), ADediting_1555779(38407523, +), ADediting_1555780(38407805, +), |
Top |
RNA editing positional annotations for FAM98C using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_748277 | chr19_38403940_+ | intronic |
| ADediting_748278 | chr19_38403945_+ | intronic |
| ADediting_748279 | chr19_38404018_+ | intronic |
| ADediting_748280 | chr19_38404030_+ | intronic |
| ADediting_748281 | chr19_38404040_+ | intronic |
| ADediting_748282 | chr19_38404078_+ | intronic |
| ADediting_748283 | chr19_38404092_+ | intronic |
| ADediting_748284 | chr19_38404097_+ | intronic |
| ADediting_748285 | chr19_38404101_+ | intronic |
| ADediting_748286 | chr19_38405889_+ | intronic |
| ADediting_748287 | chr19_38405900_+ | intronic |
| ADediting_748288 | chr19_38405921_+ | intronic |
| ADediting_748289 | chr19_38405936_+ | intronic |
| ADediting_748290 | chr19_38405937_+ | intronic |
| ADediting_748291 | chr19_38405956_+ | intronic |
| ADediting_748292 | chr19_38405957_+ | intronic |
| ADediting_748293 | chr19_38405961_+ | intronic |
| ADediting_748294 | chr19_38405974_+ | intronic |
| ADediting_748295 | chr19_38405986_+ | intronic |
| ADediting_748296 | chr19_38405996_+ | intronic |
| ADediting_748297 | chr19_38406037_+ | intronic |
| ADediting_748298 | chr19_38406040_+ | intronic |
| ADediting_748299 | chr19_38406046_+ | intronic |
| ADediting_748300 | chr19_38406054_+ | intronic |
| ADediting_748301 | chr19_38406057_+ | intronic |
| ADediting_748302 | chr19_38406116_+ | intronic |
| ADediting_748303 | chr19_38406117_+ | intronic |
| ADediting_748304 | chr19_38406123_+ | intronic |
| ADediting_748305 | chr19_38406129_+ | intronic |
| ADediting_748306 | chr19_38406131_+ | intronic |
| ADediting_748307 | chr19_38406135_+ | intronic |
| ADediting_748308 | chr19_38406217_+ | intronic |
| ADediting_748309 | chr19_38406218_+ | intronic |
| ADediting_748310 | chr19_38406236_+ | intronic |
| ADediting_748311 | chr19_38406241_+ | intronic |
| ADediting_748312 | chr19_38406242_+ | intronic |
| ADediting_748313 | chr19_38406262_+ | intronic |
| ADediting_748314 | chr19_38406266_+ | intronic |
| ADediting_748315 | chr19_38406279_+ | intronic |
| ADediting_748316 | chr19_38406291_+ | intronic |
| ADediting_748317 | chr19_38406307_+ | intronic |
| ADediting_748318 | chr19_38406311_+ | intronic |
| ADediting_748319 | chr19_38406342_+ | intronic |
| ADediting_748320 | chr19_38406351_+ | intronic |
| ADediting_748321 | chr19_38406362_+ | intronic |
| ADediting_748322 | chr19_38406371_+ | intronic |
| ADediting_748323 | chr19_38406382_+ | intronic |
| ADediting_748324 | chr19_38406383_+ | intronic |
| ADediting_748325 | chr19_38406384_+ | intronic |
| ADediting_748326 | chr19_38406390_+ | intronic |
| ADediting_748327 | chr19_38406396_+ | intronic |
| ADediting_748328 | chr19_38406401_+ | intronic |
| ADediting_748329 | chr19_38406422_+ | intronic |
| ADediting_748330 | chr19_38406423_+ | intronic |
| ADediting_748331 | chr19_38406442_+ | intronic |
| ADediting_748332 | chr19_38406445_+ | intronic |
| ADediting_748333 | chr19_38406452_+ | intronic |
| ADediting_748334 | chr19_38406502_+ | intronic |
| ADediting_748335 | chr19_38406504_+ | intronic |
| ADediting_748336 | chr19_38406521_+ | intronic |
| ADediting_748337 | chr19_38406526_+ | intronic |
| ADediting_748338 | chr19_38406529_+ | intronic |
| ADediting_748339 | chr19_38406537_+ | intronic |
| ADediting_748340 | chr19_38406542_+ | intronic |
| ADediting_748341 | chr19_38406543_+ | intronic |
| ADediting_748342 | chr19_38406547_+ | intronic |
| ADediting_748343 | chr19_38406548_+ | intronic |
| ADediting_748344 | chr19_38406550_+ | intronic |
| ADediting_748345 | chr19_38406556_+ | intronic |
| ADediting_748346 | chr19_38406561_+ | intronic |
| ADediting_748347 | chr19_38406566_+ | intronic |
| ADediting_748348 | chr19_38406569_+ | intronic |
| ADediting_748349 | chr19_38406575_+ | intronic |
| ADediting_748350 | chr19_38406589_+ | intronic |
| ADediting_748351 | chr19_38406590_+ | intronic |
| ADediting_748352 | chr19_38406592_+ | intronic |
| ADediting_748353 | chr19_38406594_+ | intronic |
| ADediting_748354 | chr19_38406597_+ | intronic |
| ADediting_748355 | chr19_38406598_+ | intronic |
| ADediting_748356 | chr19_38406612_+ | intronic |
| ADediting_748357 | chr19_38406615_+ | intronic |
| ADediting_748358 | chr19_38406616_+ | intronic |
| ADediting_748359 | chr19_38406618_+ | intronic |
| ADediting_748360 | chr19_38406619_+ | intronic |
| ADediting_748361 | chr19_38406627_+ | intronic |
| ADediting_748362 | chr19_38406628_+ | intronic |
| ADediting_748363 | chr19_38406629_+ | intronic |
| ADediting_748364 | chr19_38406633_+ | intronic |
| ADediting_748365 | chr19_38406634_+ | intronic |
| ADediting_748366 | chr19_38406637_+ | intronic |
| ADediting_748367 | chr19_38406674_+ | intronic |
| ADediting_748368 | chr19_38406678_+ | intronic |
| ADediting_748369 | chr19_38406681_+ | intronic |
| ADediting_748370 | chr19_38406686_+ | intronic |
| ADediting_748371 | chr19_38406687_+ | intronic |
| ADediting_748372 | chr19_38406691_+ | intronic |
| ADediting_748373 | chr19_38406694_+ | intronic |
| ADediting_748374 | chr19_38406700_+ | intronic |
| ADediting_748375 | chr19_38406705_+ | intronic |
| ADediting_748376 | chr19_38406710_+ | intronic |
| ADediting_748377 | chr19_38406726_+ | intronic |
| ADediting_748378 | chr19_38406730_+ | intronic |
| ADediting_748379 | chr19_38406737_+ | intronic |
| ADediting_748380 | chr19_38406740_+ | intronic |
| ADediting_748381 | chr19_38406748_+ | intronic |
| ADediting_748382 | chr19_38406767_+ | intronic |
| ADediting_748383 | chr19_38406869_+ | intronic |
| ADediting_748384 | chr19_38407389_+ | intronic |
| ADediting_748385 | chr19_38407390_+ | intronic |
| ADediting_748386 | chr19_38407394_+ | intronic |
| ADediting_748387 | chr19_38407396_+ | intronic |
| ADediting_748388 | chr19_38407410_+ | intronic |
| ADediting_748389 | chr19_38407422_+ | intronic |
| ADediting_748390 | chr19_38407426_+ | intronic |
| ADediting_748391 | chr19_38407435_+ | intronic |
| ADediting_748392 | chr19_38407445_+ | intronic |
| ADediting_748393 | chr19_38407450_+ | intronic |
| ADediting_748394 | chr19_38407451_+ | intronic |
| ADediting_748395 | chr19_38407457_+ | intronic |
| ADediting_748396 | chr19_38407470_+ | intronic |
| ADediting_748397 | chr19_38407471_+ | intronic |
| ADediting_748398 | chr19_38407475_+ | intronic |
| ADediting_748399 | chr19_38407488_+ | intronic |
| ADediting_748400 | chr19_38407500_+ | intronic |
| ADediting_748401 | chr19_38407504_+ | intronic |
| ADediting_748402 | chr19_38407510_+ | intronic |
| ADediting_748403 | chr19_38407512_+ | intronic |
| ADediting_748404 | chr19_38407516_+ | intronic |
| ADediting_748405 | chr19_38407520_+ | intronic |
| ADediting_748406 | chr19_38407536_+ | intronic |
| ADediting_748407 | chr19_38407537_+ | intronic |
| ADediting_748408 | chr19_38407545_+ | intronic |
| ADediting_748409 | chr19_38407551_+ | intronic |
| ADediting_748410 | chr19_38407554_+ | intronic |
| ADediting_748411 | chr19_38407568_+ | intronic |
| ADediting_748412 | chr19_38407571_+ | intronic |
| ADediting_748413 | chr19_38407573_+ | intronic |
| ADediting_748414 | chr19_38407593_+ | intronic |
| ADediting_748415 | chr19_38407608_+ | intronic |
| ADediting_748416 | chr19_38407612_+ | intronic |
| ADediting_748417 | chr19_38407630_+ | intronic |
| ADediting_748418 | chr19_38407631_+ | intronic |
| ADediting_748419 | chr19_38407643_+ | intronic |
| ADediting_748420 | chr19_38407645_+ | intronic |
| ADediting_748421 | chr19_38407707_+ | intronic |
| ADediting_748422 | chr19_38407756_+ | intronic |
| ADediting_748423 | chr19_38407765_+ | intronic |
| ADediting_748424 | chr19_38407773_+ | intronic |
| ADediting_748425 | chr19_38407797_+ | intronic |
| ADediting_748426 | chr19_38407799_+ | intronic |
| ADediting_748427 | chr19_38407807_+ | intronic |
| ADediting_748428 | chr19_38407812_+ | intronic |
| ADediting_748429 | chr19_38407841_+ | intronic |
| ADediting_748430 | chr19_38407857_+ | intronic |
| ADediting_748431 | chr19_38407861_+ | intronic |
| ADediting_748432 | chr19_38407867_+ | intronic |
| ADediting_748433 | chr19_38407873_+ | intronic |
| ADediting_748434 | chr19_38407877_+ | intronic |
| ADediting_748435 | chr19_38407881_+ | intronic |
| ADediting_748436 | chr19_38407894_+ | intronic |
| ADediting_748437 | chr19_38407897_+ | intronic |
| ADediting_748438 | chr19_38407900_+ | intronic |
| ADediting_748439 | chr19_38407908_+ | intronic |
| ADediting_748440 | chr19_38407909_+ | intronic |
| ADediting_748441 | chr19_38407913_+ | intronic |
| ADediting_748442 | chr19_38407929_+ | intronic |
| ADediting_748443 | chr19_38407938_+ | intronic |
| ADediting_748444 | chr19_38408174_+ | intronic |
| ADediting_748445 | chr19_38408180_+ | intronic |
| ADediting_748446 | chr19_38408189_+ | intronic |
| ADediting_748447 | chr19_38408208_+ | intronic |
| ADediting_748448 | chr19_38408256_+ | intronic |
| ADediting_748449 | chr19_38408269_+ | intronic |
| ADediting_748450 | chr19_38408274_+ | intronic |
| ADediting_748451 | chr19_38408304_+ | intronic |
| ADediting_748452 | chr19_38408305_+ | intronic |
| ADediting_748453 | chr19_38408310_+ | intronic |
| ADediting_748454 | chr19_38408327_+ | intronic |
| ADediting_748455 | chr19_38408340_+ | intronic |
| ADediting_748456 | chr19_38408343_+ | intronic |
| ADediting_748457 | chr19_38408349_+ | intronic |
| ADediting_748458 | chr19_38408372_+ | intronic |
| ADediting_748459 | chr19_38408381_+ | intronic |
| ADediting_748460 | chr19_38408382_+ | intronic |
| ADediting_748461 | chr19_38408399_+ | intronic |
| ADediting_748462 | chr19_38408412_+ | intronic |
| ADediting_748463 | chr19_38408428_+ | intronic |
| ADediting_748464 | chr19_38408438_+ | intronic |
| ADediting_748465 | chr19_38408444_+ | intronic |
| ADediting_748466 | chr19_38408448_+ | intronic |
| ADediting_748467 | chr19_38408455_+ | intronic |
| ADediting_748468 | chr19_38408465_+ | intronic |
| ADediting_748469 | chr19_38408480_+ | intronic |
| ADediting_748470 | chr19_38408487_+ | intronic |
| ADediting_748471 | chr19_38408500_+ | intronic |
| ADediting_748472 | chr19_38408509_+ | intronic |
| ADediting_748473 | chr19_38408511_+ | intronic |
| ADediting_748474 | chr19_38408516_+ | intronic |
| ADediting_1555775 | chr19_38404079_+ | intronic |
| ADediting_1555776 | chr19_38405931_+ | intronic |
| ADediting_1555777 | chr19_38406314_+ | intronic |
| ADediting_1555778 | chr19_38406655_+ | intronic |
| ADediting_1555779 | chr19_38407523_+ | intronic |
| ADediting_1555780 | chr19_38407805_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_748277 | chr19_38403940_+ | SINE | Alu | Name=AluSq |
| ADediting_748278 | chr19_38403945_+ | SINE | Alu | Name=AluSq |
| ADediting_748279 | chr19_38404018_+ | SINE | Alu | Name=AluSq |
| ADediting_748280 | chr19_38404030_+ | SINE | Alu | Name=AluSq |
| ADediting_748281 | chr19_38404040_+ | SINE | Alu | Name=AluSq |
| ADediting_748282 | chr19_38404078_+ | SINE | Alu | Name=AluSq |
| ADediting_748283 | chr19_38404092_+ | SINE | Alu | Name=AluSq |
| ADediting_748284 | chr19_38404097_+ | SINE | Alu | Name=AluSq |
| ADediting_748285 | chr19_38404101_+ | SINE | Alu | Name=AluSq |
| ADediting_748286 | chr19_38405889_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748287 | chr19_38405900_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748288 | chr19_38405921_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748289 | chr19_38405936_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748290 | chr19_38405937_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748291 | chr19_38405956_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748292 | chr19_38405957_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748293 | chr19_38405961_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748294 | chr19_38405974_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748295 | chr19_38405986_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748296 | chr19_38405996_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748297 | chr19_38406037_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748298 | chr19_38406040_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748299 | chr19_38406046_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748300 | chr19_38406054_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748301 | chr19_38406057_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748302 | chr19_38406116_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748303 | chr19_38406117_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748304 | chr19_38406123_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748305 | chr19_38406129_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748306 | chr19_38406131_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748307 | chr19_38406135_+ | SINE | Alu | Name=AluSc5 |
| ADediting_748308 | chr19_38406217_+ | SINE | Alu | Name=AluSp |
| ADediting_748309 | chr19_38406218_+ | SINE | Alu | Name=AluSp |
| ADediting_748310 | chr19_38406236_+ | SINE | Alu | Name=AluSp |
| ADediting_748311 | chr19_38406241_+ | SINE | Alu | Name=AluSp |
| ADediting_748312 | chr19_38406242_+ | SINE | Alu | Name=AluSp |
| ADediting_748313 | chr19_38406262_+ | SINE | Alu | Name=AluSp |
| ADediting_748314 | chr19_38406266_+ | SINE | Alu | Name=AluSp |
| ADediting_748315 | chr19_38406279_+ | SINE | Alu | Name=AluSp |
| ADediting_748316 | chr19_38406291_+ | SINE | Alu | Name=AluSp |
| ADediting_748317 | chr19_38406307_+ | SINE | Alu | Name=AluSp |
| ADediting_748318 | chr19_38406311_+ | SINE | Alu | Name=AluSp |
| ADediting_748319 | chr19_38406342_+ | SINE | Alu | Name=AluSp |
| ADediting_748320 | chr19_38406351_+ | SINE | Alu | Name=AluSp |
| ADediting_748321 | chr19_38406362_+ | SINE | Alu | Name=AluSp |
| ADediting_748322 | chr19_38406371_+ | SINE | Alu | Name=AluSp |
| ADediting_748323 | chr19_38406382_+ | SINE | Alu | Name=AluSp |
| ADediting_748324 | chr19_38406383_+ | SINE | Alu | Name=AluSp |
| ADediting_748325 | chr19_38406384_+ | SINE | Alu | Name=AluSp |
| ADediting_748326 | chr19_38406390_+ | SINE | Alu | Name=AluSp |
| ADediting_748327 | chr19_38406396_+ | SINE | Alu | Name=AluSp |
| ADediting_748328 | chr19_38406401_+ | SINE | Alu | Name=AluSp |
| ADediting_748329 | chr19_38406422_+ | SINE | Alu | Name=AluSp |
| ADediting_748330 | chr19_38406423_+ | SINE | Alu | Name=AluSp |
| ADediting_748331 | chr19_38406442_+ | SINE | Alu | Name=AluSp |
| ADediting_748332 | chr19_38406445_+ | SINE | Alu | Name=AluSp |
| ADediting_748333 | chr19_38406452_+ | SINE | Alu | Name=AluSp |
| ADediting_748334 | chr19_38406502_+ | SINE | Alu | Name=AluJo |
| ADediting_748335 | chr19_38406504_+ | SINE | Alu | Name=AluJo |
| ADediting_748336 | chr19_38406521_+ | SINE | Alu | Name=AluJo |
| ADediting_748337 | chr19_38406526_+ | SINE | Alu | Name=AluJo |
| ADediting_748338 | chr19_38406529_+ | SINE | Alu | Name=AluJo |
| ADediting_748339 | chr19_38406537_+ | SINE | Alu | Name=AluJo |
| ADediting_748340 | chr19_38406542_+ | SINE | Alu | Name=AluJo |
| ADediting_748341 | chr19_38406543_+ | SINE | Alu | Name=AluJo |
| ADediting_748342 | chr19_38406547_+ | SINE | Alu | Name=AluJo |
| ADediting_748343 | chr19_38406548_+ | SINE | Alu | Name=AluJo |
| ADediting_748344 | chr19_38406550_+ | SINE | Alu | Name=AluJo |
| ADediting_748345 | chr19_38406556_+ | SINE | Alu | Name=AluJo |
| ADediting_748346 | chr19_38406561_+ | SINE | Alu | Name=AluJo |
| ADediting_748347 | chr19_38406566_+ | SINE | Alu | Name=AluJo |
| ADediting_748348 | chr19_38406569_+ | SINE | Alu | Name=AluJo |
| ADediting_748349 | chr19_38406575_+ | SINE | Alu | Name=AluJo |
| ADediting_748350 | chr19_38406589_+ | SINE | Alu | Name=AluJo |
| ADediting_748351 | chr19_38406590_+ | SINE | Alu | Name=AluJo |
| ADediting_748352 | chr19_38406592_+ | SINE | Alu | Name=AluJo |
| ADediting_748353 | chr19_38406594_+ | SINE | Alu | Name=AluJo |
| ADediting_748354 | chr19_38406597_+ | SINE | Alu | Name=AluJo |
| ADediting_748355 | chr19_38406598_+ | SINE | Alu | Name=AluJo |
| ADediting_748356 | chr19_38406612_+ | SINE | Alu | Name=AluJo |
| ADediting_748357 | chr19_38406615_+ | SINE | Alu | Name=AluJo |
| ADediting_748358 | chr19_38406616_+ | SINE | Alu | Name=AluJo |
| ADediting_748359 | chr19_38406618_+ | SINE | Alu | Name=AluJo |
| ADediting_748360 | chr19_38406619_+ | SINE | Alu | Name=AluJo |
| ADediting_748361 | chr19_38406627_+ | SINE | Alu | Name=AluJo |
| ADediting_748362 | chr19_38406628_+ | SINE | Alu | Name=AluJo |
| ADediting_748363 | chr19_38406629_+ | SINE | Alu | Name=AluJo |
| ADediting_748364 | chr19_38406633_+ | SINE | Alu | Name=AluJo |
| ADediting_748365 | chr19_38406634_+ | SINE | Alu | Name=AluJo |
| ADediting_748366 | chr19_38406637_+ | SINE | Alu | Name=AluJo |
| ADediting_748367 | chr19_38406674_+ | SINE | Alu | Name=AluJo |
| ADediting_748368 | chr19_38406678_+ | SINE | Alu | Name=AluJo |
| ADediting_748369 | chr19_38406681_+ | SINE | Alu | Name=AluJo |
| ADediting_748370 | chr19_38406686_+ | SINE | Alu | Name=AluJo |
| ADediting_748371 | chr19_38406687_+ | SINE | Alu | Name=AluJo |
| ADediting_748372 | chr19_38406691_+ | SINE | Alu | Name=AluJo |
| ADediting_748373 | chr19_38406694_+ | SINE | Alu | Name=AluJo |
| ADediting_748374 | chr19_38406700_+ | SINE | Alu | Name=AluJo |
| ADediting_748375 | chr19_38406705_+ | SINE | Alu | Name=AluJo |
| ADediting_748376 | chr19_38406710_+ | SINE | Alu | Name=AluJo |
| ADediting_748377 | chr19_38406726_+ | SINE | Alu | Name=AluJo |
| ADediting_748378 | chr19_38406730_+ | SINE | Alu | Name=AluJo |
| ADediting_748379 | chr19_38406737_+ | SINE | Alu | Name=AluJo |
| ADediting_748380 | chr19_38406740_+ | SINE | Alu | Name=AluJo |
| ADediting_748381 | chr19_38406748_+ | SINE | Alu | Name=AluJo |
| ADediting_748382 | chr19_38406767_+ | SINE | Alu | Name=AluJo |
| ADediting_748384 | chr19_38407389_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748385 | chr19_38407390_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748386 | chr19_38407394_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748387 | chr19_38407396_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748388 | chr19_38407410_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748389 | chr19_38407422_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748390 | chr19_38407426_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748391 | chr19_38407435_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748392 | chr19_38407445_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748393 | chr19_38407450_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748394 | chr19_38407451_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748395 | chr19_38407457_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748396 | chr19_38407470_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748397 | chr19_38407471_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748398 | chr19_38407475_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748399 | chr19_38407488_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748400 | chr19_38407500_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748401 | chr19_38407504_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748402 | chr19_38407510_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748403 | chr19_38407512_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748404 | chr19_38407516_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748405 | chr19_38407520_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748406 | chr19_38407536_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748407 | chr19_38407537_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748408 | chr19_38407545_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748409 | chr19_38407551_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748410 | chr19_38407554_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748411 | chr19_38407568_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748412 | chr19_38407571_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748413 | chr19_38407573_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748414 | chr19_38407593_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748415 | chr19_38407608_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748416 | chr19_38407612_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748417 | chr19_38407630_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748418 | chr19_38407631_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748419 | chr19_38407643_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748420 | chr19_38407645_+ | SINE | Alu | Name=AluSg4 |
| ADediting_748421 | chr19_38407707_+ | SINE | Alu | Name=AluY |
| ADediting_748422 | chr19_38407756_+ | SINE | Alu | Name=AluY |
| ADediting_748423 | chr19_38407765_+ | SINE | Alu | Name=AluY |
| ADediting_748424 | chr19_38407773_+ | SINE | Alu | Name=AluY |
| ADediting_748425 | chr19_38407797_+ | SINE | Alu | Name=AluY |
| ADediting_748426 | chr19_38407799_+ | SINE | Alu | Name=AluY |
| ADediting_748427 | chr19_38407807_+ | SINE | Alu | Name=AluY |
| ADediting_748428 | chr19_38407812_+ | SINE | Alu | Name=AluY |
| ADediting_748429 | chr19_38407841_+ | SINE | Alu | Name=AluY |
| ADediting_748430 | chr19_38407857_+ | SINE | Alu | Name=AluY |
| ADediting_748431 | chr19_38407861_+ | SINE | Alu | Name=AluY |
| ADediting_748432 | chr19_38407867_+ | SINE | Alu | Name=AluY |
| ADediting_748433 | chr19_38407873_+ | SINE | Alu | Name=AluY |
| ADediting_748434 | chr19_38407877_+ | SINE | Alu | Name=AluY |
| ADediting_748435 | chr19_38407881_+ | SINE | Alu | Name=AluY |
| ADediting_748436 | chr19_38407894_+ | SINE | Alu | Name=AluY |
| ADediting_748437 | chr19_38407897_+ | SINE | Alu | Name=AluY |
| ADediting_748438 | chr19_38407900_+ | SINE | Alu | Name=AluY |
| ADediting_748439 | chr19_38407908_+ | SINE | Alu | Name=AluY |
| ADediting_748440 | chr19_38407909_+ | SINE | Alu | Name=AluY |
| ADediting_748441 | chr19_38407913_+ | SINE | Alu | Name=AluY |
| ADediting_748442 | chr19_38407929_+ | SINE | Alu | Name=AluY |
| ADediting_748443 | chr19_38407938_+ | SINE | Alu | Name=AluY |
| ADediting_748444 | chr19_38408174_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748445 | chr19_38408180_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748446 | chr19_38408189_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748447 | chr19_38408208_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748448 | chr19_38408256_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748449 | chr19_38408269_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748450 | chr19_38408274_+ | SINE | Alu | Name=AluSx3 |
| ADediting_748451 | chr19_38408304_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748452 | chr19_38408305_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748453 | chr19_38408310_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748454 | chr19_38408327_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748455 | chr19_38408340_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748456 | chr19_38408343_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748457 | chr19_38408349_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748458 | chr19_38408372_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748459 | chr19_38408381_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748460 | chr19_38408382_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748461 | chr19_38408399_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748462 | chr19_38408412_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748463 | chr19_38408428_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748464 | chr19_38408438_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748465 | chr19_38408444_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748466 | chr19_38408448_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748467 | chr19_38408455_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748468 | chr19_38408465_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748469 | chr19_38408480_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748470 | chr19_38408487_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748471 | chr19_38408500_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748472 | chr19_38408509_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748473 | chr19_38408511_+ | SINE | Alu | Name=AluSc8 |
| ADediting_748474 | chr19_38408516_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1555775 | chr19_38404079_+ | SINE | Alu | Name=AluSq |
| ADediting_1555776 | chr19_38405931_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1555777 | chr19_38406314_+ | SINE | Alu | Name=AluSp |
| ADediting_1555778 | chr19_38406655_+ | SINE | Alu | Name=AluJo |
| ADediting_1555779 | chr19_38407523_+ | SINE | Alu | Name=AluSg4 |
| ADediting_1555780 | chr19_38407805_+ | SINE | Alu | Name=AluY |
Top |
RNA A-to-I editing events in the alternative splicing sites for FAM98C |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ME2 | ADediting_748383 | chr19_38406869_+ | 38406859:38406881 | 3ss | 10i | CACGTGGGGAAGGGCTCCAGGGT | -7.08 | CACGTGGGGAGGGGCTCCAGGGT | -6.81 |
| ME2 | ADediting_748383 | chr19_38406869_+ | 38406859:38406881 | 3ss | 10i | CACGTGGGGAAGGGCTCCAGGGT | -7.08 | CACGTGGGGAGGGGCTCCAGGGT | -6.81 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM98C |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for FAM98C |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for FAM98C |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_496066 | chr15_66496985_- | ENSG00000130244.12 | ENST00000588262.5 | FAM98C-205 | hsa-miR-4512 | chr19 | 38408839 | 38408845 | 7mer-m8 | 38408824 | 38408846 | 148 | -23.21 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000130244.12 | ENST00000252530.9 | FAM98C-201 | hsa-miR-5585-3p | chr19 | 38409027 | 38409033 | 7mer-m8 | 38409013 | 38409034 | 140 | -15.03 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000130244.12 | ENST00000343358.11 | FAM98C-202 | hsa-miR-5585-3p | chr19 | 38409027 | 38409033 | 7mer-m8 | 38409013 | 38409034 | 140 | -15.03 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000130244.12 | ENST00000588262.5 | FAM98C-205 | hsa-miR-5585-3p | chr19 | 38409027 | 38409033 | 7mer-m8 | 38409013 | 38409034 | 140 | -15.03 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for FAM98C |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for FAM98C |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1555777 | chr19_38406314_+ | 0.00555051178586133 | 0.225396412758394 | 1.12196992729227e-05 | 0.350133873472906 | 0.00273309138328816 | 0.242999007592732 |
| CER | ADediting_748277 | chr19_38403940_+ | 0.185725190269967 | 0.10863827794961 | 1.43317040950498e-05 | 0.346136656115941 | 0.320302542884982 | 0.0816940781741167 |
| CER | ADediting_748278 | chr19_38403945_+ | 0.142705588713208 | 0.120252447811799 | 1.51386971575902e-05 | 0.345234684476295 | 0.110635733261462 | 0.130793093088145 |
| CER | ADediting_748280 | chr19_38404030_+ | 0.165037387371605 | 0.113940099762692 | 3.20200166718669e-05 | 0.332611971683521 | 0.248870837730925 | 0.0947304936553187 |
| CER | ADediting_748283 | chr19_38404092_+ | 0.0338576319646724 | 0.173377386183951 | 8.55779125006439e-08 | 0.420321752478218 | 0.000705848306559256 | 0.273564986551331 |
| CER | ADediting_748284 | chr19_38404097_+ | 0.0661256647063718 | 0.150440465596275 | 1.85676797161972e-06 | 0.377960469866737 | 0.00568347177847405 | 0.224785770106459 |
| CER | ADediting_748291 | chr19_38405956_+ | 0.0603482824788377 | 0.153730800767932 | 2.23025248289251e-05 | 0.338774521805071 | 0.0795404396023215 | 0.143619454084798 |
| CER | ADediting_748301 | chr19_38406057_+ | 0.042854259495582 | 0.165592877957451 | 2.30738236917947e-06 | 0.374733745704735 | 0.00206162722557708 | 0.249671566089668 |
| CER | ADediting_748303 | chr19_38406117_+ | 0.000712762128377854 | 0.273357243123187 | 2.213306235856e-06 | 0.375354614237458 | 0.00940836082124703 | 0.211398309074948 |
| CER | ADediting_748304 | chr19_38406123_+ | 0.0291499960590883 | 0.178177573616485 | 5.03278974036395e-07 | 0.396654356063919 | 0.0376159671241841 | 0.16993575972047 |
| CER | ADediting_748305 | chr19_38406129_+ | 0.0331779692157136 | 0.174033972723403 | 2.38779614987028e-07 | 0.406837873860606 | 0.0613394894557276 | 0.153148469373781 |
| CER | ADediting_748307 | chr19_38406135_+ | 0.062290948828268 | 0.152596700290448 | 3.54772979682748e-06 | 0.368240897861622 | 0.0465416235393112 | 0.162795408821792 |
| CER | ADediting_748309 | chr19_38406218_+ | 0.000898726499972122 | 0.26836760403115 | 3.77820918698082e-07 | 0.400610700174942 | 0.0703559479005815 | 0.148177036143744 |
| TCX | ADediting_748309 | chr19_38406218_+ | 0.178013977310256 | 0.110560964718041 | 2.44155052543027e-06 | 0.373888680675662 | 0.0583450128615312 | -0.154932098294546 |
| CER | ADediting_748310 | chr19_38406236_+ | 0.0684280551253718 | 0.149194422917791 | 0.000117797144102851 | 0.309249990769984 | 0.101331535330384 | 0.134294166404603 |
| CER | ADediting_748312 | chr19_38406242_+ | 0.0187287434443593 | 0.191768267641258 | 4.65950676468229e-05 | 0.326077792542399 | 0.304312439122641 | -0.0844293614632546 |
| CER | ADediting_748316 | chr19_38406291_+ | 0.0123649557080731 | 0.203807472571244 | 1.49688829644638e-08 | 0.441961772550046 | 0.036570639065527 | 0.170862752078345 |
| CER | ADediting_748317 | chr19_38406307_+ | 0.124566882941858 | 0.125958086619607 | 5.11276648210792e-05 | 0.324437623609742 | 0.0876775678756595 | 0.139923175905955 |
| CER | ADediting_748318 | chr19_38406311_+ | 0.00161498502620429 | 0.255311816757497 | 1.13979225775284e-07 | 0.41661486092068 | 0.0508831481237436 | 0.159729153358265 |
| CER | ADediting_748326 | chr19_38406390_+ | 6.52924302959575e-05 | 0.320071207653304 | 8.22672263048591e-05 | 0.315882496292451 | 0.77182793333125 | 0.0238734901322524 |
| CER | ADediting_748336 | chr19_38406521_+ | 0.00174317927317257 | 0.253560692696915 | 3.72926005394199e-10 | 0.483343310822681 | 0.0766614728637117 | 0.145000143190806 |
| TCX | ADediting_748336 | chr19_38406521_+ | 0.0847276412059649 | 0.141230118333422 | 3.17547120887897e-07 | 0.40298408402795 | 0.00725698113171083 | -0.218388621486372 |
| CER | ADediting_748337 | chr19_38406526_+ | 5.74316869142938e-05 | 0.322369960941764 | 1.70154374563089e-06 | 0.379247289829817 | 0.00534534388436699 | 0.226364819304023 |
| CER | ADediting_748343 | chr19_38406548_+ | 0.000288194657790741 | 0.292000314979665 | 5.90900769340325e-09 | 0.452909513648564 | 0.793699961281618 | 0.0215297566834254 |
| CER | ADediting_748347 | chr19_38406566_+ | 0.00212138958290239 | 0.249003237972893 | 4.46791793456606e-05 | 0.326816561198977 | 0.901243767453226 | 0.0102171385744367 |
| DLPFC | ADediting_748353 | chr19_38406594_+ | 0.00299534147254839 | 0.168061568010995 | 1.11609733058651e-08 | 0.317284800232243 | 0.101815209187594 | 0.0930993485612111 |
| CER | ADediting_748367 | chr19_38406674_+ | 0.093093491268279 | 0.137612379020145 | 0.000168469684642705 | 0.302479796078493 | 0.038336122511385 | 0.169309673927098 |
| CER | ADediting_748368 | chr19_38406678_+ | 1.36059333084531e-05 | 0.346989771136679 | 4.94377138862872e-05 | 0.325032579962297 | 0.873092389869391 | 0.0131514972473248 |
| CER | ADediting_748369 | chr19_38406681_+ | 0.00603747961318112 | 0.223220012311885 | 7.086165113716e-08 | 0.422738356711797 | 0.000155251506897192 | 0.304040456951963 |
| TCX | ADediting_748369 | chr19_38406681_+ | 0.572342818931151 | 0.0464635428111816 | 2.40912486654839e-05 | 0.337470884196689 | 0.357994522705182 | -0.0755766370375381 |
| CER | ADediting_748374 | chr19_38406700_+ | 0.040621510957371 | 0.167386234358301 | 7.34657208669095e-05 | 0.317941178730566 | 0.0020731400110174 | 0.249541461635234 |
| CER | ADediting_748376 | chr19_38406710_+ | 0.020831385107285 | 0.188575834389484 | 1.23275390336091e-06 | 0.383950812363626 | 0.00320365758658277 | 0.239159679483445 |
| TCX | ADediting_748376 | chr19_38406710_+ | 0.014083885802365 | 0.200101660798469 | 1.98518396072663e-05 | 0.34073047746333 | 0.630303454368022 | -0.0396139196026495 |
| TCX | ADediting_748377 | chr19_38406726_+ | 0.00062221446219604 | 0.276238312755892 | 4.3048059385055e-07 | 0.398816609332108 | 0.0295620687662084 | -0.17773206195302 |
| TCX | ADediting_748380 | chr19_38406740_+ | 0.00140868555632192 | 0.258415474800197 | 2.98134055721561e-08 | 0.433589929276229 | 0.119497151114471 | -0.127666593087982 |
| TCX | ADediting_748381 | chr19_38406748_+ | 0.00240127982301423 | 0.246084168568885 | 6.24124798081435e-05 | 0.320881702512369 | 0.261367469180564 | -0.0922821762343959 |
| DLPFC | ADediting_748388 | chr19_38407410_+ | 1.04832325408031e-06 | 0.273112201494367 | 8.19946300732966e-09 | 0.320033006309172 | 0.316316564147603 | 0.0570971713098975 |
| CER | ADediting_748388 | chr19_38407410_+ | 2.97274722288778e-05 | 0.333888580073078 | 6.83736435348137e-06 | 0.358058601479519 | 0.00646576236473521 | 0.221431651362187 |
| CER | ADediting_748394 | chr19_38407451_+ | 0.166760521301668 | 0.113480287093619 | 4.38845458025415e-05 | 0.327131733149544 | 0.262433044021005 | 0.0920771614626832 |
| TCX | ADediting_748394 | chr19_38407451_+ | 0.0745493386127958 | 0.146039929672218 | 6.13252207467654e-06 | 0.359771360806086 | 0.158022555150631 | -0.115849825634862 |
| CER | ADediting_748400 | chr19_38407500_+ | 0.0263653989544462 | 0.181337413499429 | 8.17141925178255e-06 | 0.355231024833903 | 0.0351563454049414 | 0.172153185174719 |
| CER | ADediting_748402 | chr19_38407510_+ | 0.0267055886300192 | 0.180936509390779 | 3.24508295759753e-05 | 0.332381708651137 | 0.1227811158251 | 0.126553650711031 |
| CER | ADediting_748405 | chr19_38407520_+ | 2.4986403859865e-05 | 0.336852358169931 | 2.07900498252657e-06 | 0.376285876322356 | 0.00103895742573775 | 0.265198175852761 |
| CER | ADediting_748411 | chr19_38407568_+ | 0.0573664823495453 | 0.155531261057597 | 0.000180248892271556 | 0.301182298440987 | 0.00902662738700926 | 0.212527521047559 |
| TCX | ADediting_748411 | chr19_38407568_+ | 0.433251996526273 | 0.0644564869733338 | 0.00017644753128624 | 0.301592173936633 | 0.578120335020434 | -0.0457670800839464 |
| CER | ADediting_748414 | chr19_38407593_+ | 0.0714341495454153 | 0.147617885147785 | 9.17938506103059e-06 | 0.353371094788439 | 0.00519696719206871 | 0.227086090932495 |
| CER | ADediting_748416 | chr19_38407612_+ | 0.0248808994543563 | 0.183140407236304 | 0.00016749177533839 | 0.302591279222509 | 0.000931174150632377 | 0.267595848454404 |
| CER | ADediting_748442 | chr19_38407929_+ | 0.308847026261326 | 0.0836443230974334 | 5.83351328693105e-06 | 0.360554990098317 | 0.0225006647882848 | 0.186233788630353 |
| CER | ADediting_748445 | chr19_38408180_+ | 0.0526065720049183 | 0.158571964214502 | 6.66076374492039e-07 | 0.392736967325899 | 0.00681169277625697 | 0.220062607722128 |
| CER | ADediting_748446 | chr19_38408189_+ | 0.0884876852624466 | 0.139570416619527 | 3.40541580593171e-06 | 0.368864904936673 | 0.00341923877306764 | 0.237568466881004 |
| CER | ADediting_748474 | chr19_38408516_+ | 0.12601597702038 | 0.125479631017747 | 5.5165665340843e-05 | 0.323087527245799 | 0.00469091808445475 | 0.229693003896144 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.12845769565217e-09 | 0.326051074193826 | 0.000242050485630284 | 0.207044981509523 | 2.68687653643031e-45 | 0.690857929786896 |
| AC | 1.68177842895558e-45 | 0.744992180006043 | 4.39651546225072e-50 | 0.768902486435401 | 2.04687704534992e-18 | 0.516044375622551 |
| PCC | 6.14856419717819e-39 | 0.77129911290869 | 4.95363711522592e-52 | 0.839819282679419 | 0.000164971885136733 | 0.269311811428362 |
| TCX | 4.91708575213377e-12 | 0.52572101495123 | 3.53307847498691e-16 | 0.602321478315887 | 0.838268684515943 | 0.0168047952837784 |
| FP | 1.168565802275e-13 | 0.51891307671338 | 3.75905098453788e-13 | 0.509559689195021 | 0.00328038645732722 | 0.219231831921252 |
| IFG | 3.31848742344069e-05 | 0.730999017508046 | 1.17847222890767e-06 | 0.80564712397669 | 0.304048674871888 | 0.214123773976569 |
| PG | 8.45957153235213e-07 | 0.351838097001635 | 5.15617908483623e-10 | 0.435626129766471 | 0.856251907160119 | 0.0133719196414527 |
| STG | 9.84505847148825e-16 | 0.739208145071728 | 7.84549238788352e-11 | 0.636222055632715 | 0.031974530194863 | 0.234252620511401 |
Top |
Relation with AD stages for FAM98C |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_748290 | chr19_38405937_+ | 7.37002214028385e-05 | 0.371983973572666 |
| CER | ADediting_748304 | chr19_38406123_+ | 0.000391858540034145 | 0.335144267127393 |
| CER | ADediting_748305 | chr19_38406129_+ | 0.000346867460362516 | 0.337991340875214 |
| CER | ADediting_748309 | chr19_38406218_+ | 0.00064991466418275 | 0.323031951685984 |
| CER | ADediting_748336 | chr19_38406521_+ | 0.00042570531824246 | 0.333194566470014 |
| CER | ADediting_748369 | chr19_38406681_+ | 0.000290769586296697 | 0.342062072304376 |
| CER | ADediting_748371 | chr19_38406687_+ | 0.00035496978820053 | 0.337454400155682 |
| CER | ADediting_748374 | chr19_38406700_+ | 0.000196223305051677 | 0.350942644592931 |
| CER | ADediting_748376 | chr19_38406710_+ | 0.00015606494914803 | 0.355995093288791 |
| CER | ADediting_748400 | chr19_38407500_+ | 0.000999955022897168 | 0.312307480334307 |
| CER | ADediting_748414 | chr19_38407593_+ | 0.000315815350208789 | 0.340162358633824 |
| CER | ADediting_748446 | chr19_38408189_+ | 0.000348786634144556 | 0.337863120287986 |
| CER | ADediting_748474 | chr19_38408516_+ | 8.68373739926973e-05 | 0.36855923793745 |
| IFG | ADediting_748320 | chr19_38406351_+ | 0.0112614191895443 | 0.498187153213234 |
| IFG | ADediting_748371 | chr19_38406687_+ | 0.0354713369979928 | 0.422303326441651 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
Top |
RelatedDrugs for FAM98C |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for FAM98C |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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