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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SPINDOC |
 Gene summary |
| Gene information | Gene symbol | SPINDOC | Gene ID | 144097 |
| Gene name | spindlin interactor and repressor of chromatin binding | |
| Synonyms | C11orf84|SPIN-DOC | |
| Cytomap | 11q13.1 | |
| Type of gene | protein-coding | |
| Description | spindlin interactor and repressor of chromatin-binding proteinSPIN1 docking proteinhypothetical protein BC007540uncharacterized protein C11orf84 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9BUA3, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| SPINDOC | GO:0045892 | negative regulation of transcription, DNA-templated | 29061846 |
Top |
RNA A-to-I events for SPINDOC |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_265118(63819230, +), ADediting_265119(63819237, +), ADediting_265120(63819269, +), ADediting_265121(63819272, +), ADediting_265122(63819275, +), ADediting_265123(63819288, +), ADediting_265124(63819291, +), ADediting_265125(63819304, +), ADediting_265126(63819311, +), ADediting_265127(63819337, +), ADediting_265128(63819340, +), ADediting_265129(63819350, +), ADediting_265130(63819368, +), ADediting_265131(63819376, +), ADediting_265132(63819377, +), ADediting_265133(63819391, +), ADediting_265134(63819394, +), ADediting_265135(63819400, +), ADediting_265136(63819411, +), ADediting_265137(63819431, +), ADediting_265138(63819433, +), ADediting_265139(63819445, +), ADediting_265140(63819571, +), ADediting_265141(63819590, +), ADediting_265142(63819597, +), ADediting_265143(63819636, +), ADediting_265144(63819686, +), ADediting_265145(63819740, +), ADediting_265146(63819765, +), ADediting_265147(63819771, +), ADediting_265148(63820134, +), ADediting_265149(63820142, +), ADediting_265150(63820148, +), ADediting_265151(63820183, +), ADediting_265152(63820203, +), ADediting_265153(63820222, +), ADediting_265154(63820233, +), ADediting_265155(63820236, +), ADediting_265156(63820237, +), ADediting_265157(63820238, +), ADediting_265158(63820246, +), ADediting_265159(63820247, +), ADediting_265160(63820248, +), ADediting_265161(63820251, +), ADediting_265162(63820255, +), ADediting_265163(63820267, +), ADediting_265164(63820277, +), ADediting_265165(63820300, +), ADediting_265166(63820304, +), ADediting_265167(63820333, +), ADediting_265168(63820339, +), ADediting_265169(63820931, +), ADediting_265170(63820977, +), ADediting_265171(63820985, +), ADediting_265172(63820986, +), ADediting_265173(63820994, +), ADediting_265174(63820997, +), ADediting_265175(63821001, +), ADediting_265176(63821009, +), ADediting_265177(63821461, +), ADediting_265178(63821621, +), ADediting_265179(63821775, +), ADediting_265180(63821779, +), ADediting_265181(63821802, +), ADediting_265182(63821805, +), ADediting_265183(63821813, +), ADediting_265184(63821816, +), ADediting_265185(63821818, +), ADediting_265186(63821829, +), ADediting_265187(63821834, +), ADediting_265188(63821835, +), ADediting_265189(63821836, +), ADediting_265190(63821842, +), ADediting_265191(63821848, +), ADediting_265192(63821849, +), ADediting_265193(63821852, +), ADediting_265194(63821864, +), ADediting_265195(63821866, +), ADediting_265196(63821875, +), ADediting_265197(63821878, +), ADediting_265198(63821888, +), ADediting_265199(63821906, +), ADediting_265200(63821909, +), ADediting_265201(63821914, +), ADediting_265202(63821915, +), ADediting_265203(63821921, +), ADediting_265204(63821932, +), ADediting_265205(63821934, +), ADediting_265206(63821938, +), ADediting_265207(63821946, +), ADediting_265208(63821959, +), ADediting_265209(63821963, +), ADediting_265210(63821971, +), ADediting_265211(63821984, +), ADediting_265212(63821987, +), ADediting_265213(63822009, +), ADediting_265214(63822010, +), ADediting_265215(63822011, +), ADediting_265216(63822101, +), ADediting_265217(63822110, +), ADediting_265218(63822111, +), ADediting_265219(63822118, +), ADediting_265220(63822128, +), ADediting_265221(63822147, +), ADediting_265222(63822148, +), ADediting_265223(63822153, +), ADediting_265224(63822161, +), ADediting_265225(63822162, +), ADediting_265226(63822172, +), ADediting_265227(63822178, +), ADediting_265228(63822182, +), ADediting_265229(63822183, +), ADediting_265230(63822191, +), ADediting_265231(63822196, +), ADediting_265232(63822197, +), ADediting_265233(63822222, +), ADediting_265234(63822229, +), ADediting_265235(63822238, +), ADediting_265236(63822245, +), ADediting_265237(63822246, +), ADediting_265238(63822251, +), ADediting_265239(63822259, +), ADediting_265240(63822264, +), ADediting_265241(63822269, +), ADediting_265242(63822270, +), ADediting_265243(63822310, +), ADediting_265244(63825970, +), ADediting_265245(63825975, +), ADediting_265246(63826032, +), ADediting_265247(63826056, +), ADediting_265248(63826068, +), ADediting_265249(63826078, +), ADediting_265250(63826124, +), ADediting_265251(63826141, +), ADediting_265252(63826156, +), ADediting_265253(63826157, +), ADediting_265254(63826158, +), ADediting_265255(63826171, +), ADediting_265256(63826183, +), ADediting_265257(63826197, +), ADediting_265258(63826198, +), ADediting_265259(63826210, +), ADediting_1527546(63816035, +), ADediting_1527547(63819432, +), ADediting_1527548(63819520, +), ADediting_1527549(63819596, +), ADediting_1527550(63820221, +), ADediting_1527551(63820343, +), ADediting_1527552(63820358, +), ADediting_1527553(63820937, +), ADediting_1527554(63820941, +), ADediting_1527555(63821017, +), ADediting_1527556(63821350, +), ADediting_1527557(63822317, +), ADediting_1527558(63822348, +), ADediting_1527559(63823738, +), |
Top |
RNA editing positional annotations for SPINDOC using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_265118 | chr11_63819230_+ | intronic |
| ADediting_265119 | chr11_63819237_+ | intronic |
| ADediting_265120 | chr11_63819269_+ | intronic |
| ADediting_265121 | chr11_63819272_+ | intronic |
| ADediting_265122 | chr11_63819275_+ | intronic |
| ADediting_265123 | chr11_63819288_+ | intronic |
| ADediting_265124 | chr11_63819291_+ | intronic |
| ADediting_265125 | chr11_63819304_+ | intronic |
| ADediting_265126 | chr11_63819311_+ | intronic |
| ADediting_265127 | chr11_63819337_+ | intronic |
| ADediting_265128 | chr11_63819340_+ | intronic |
| ADediting_265129 | chr11_63819350_+ | intronic |
| ADediting_265130 | chr11_63819368_+ | intronic |
| ADediting_265131 | chr11_63819376_+ | intronic |
| ADediting_265132 | chr11_63819377_+ | intronic |
| ADediting_265133 | chr11_63819391_+ | intronic |
| ADediting_265134 | chr11_63819394_+ | intronic |
| ADediting_265135 | chr11_63819400_+ | intronic |
| ADediting_265136 | chr11_63819411_+ | intronic |
| ADediting_265137 | chr11_63819431_+ | intronic |
| ADediting_265138 | chr11_63819433_+ | intronic |
| ADediting_265139 | chr11_63819445_+ | intronic |
| ADediting_265140 | chr11_63819571_+ | intronic |
| ADediting_265141 | chr11_63819590_+ | intronic |
| ADediting_265142 | chr11_63819597_+ | intronic |
| ADediting_265143 | chr11_63819636_+ | intronic |
| ADediting_265144 | chr11_63819686_+ | intronic |
| ADediting_265145 | chr11_63819740_+ | intronic |
| ADediting_265146 | chr11_63819765_+ | intronic |
| ADediting_265147 | chr11_63819771_+ | intronic |
| ADediting_265148 | chr11_63820134_+ | intronic |
| ADediting_265149 | chr11_63820142_+ | intronic |
| ADediting_265150 | chr11_63820148_+ | intronic |
| ADediting_265151 | chr11_63820183_+ | intronic |
| ADediting_265152 | chr11_63820203_+ | intronic |
| ADediting_265153 | chr11_63820222_+ | intronic |
| ADediting_265154 | chr11_63820233_+ | intronic |
| ADediting_265155 | chr11_63820236_+ | intronic |
| ADediting_265156 | chr11_63820237_+ | intronic |
| ADediting_265157 | chr11_63820238_+ | intronic |
| ADediting_265158 | chr11_63820246_+ | intronic |
| ADediting_265159 | chr11_63820247_+ | intronic |
| ADediting_265160 | chr11_63820248_+ | intronic |
| ADediting_265161 | chr11_63820251_+ | intronic |
| ADediting_265162 | chr11_63820255_+ | intronic |
| ADediting_265163 | chr11_63820267_+ | intronic |
| ADediting_265164 | chr11_63820277_+ | intronic |
| ADediting_265165 | chr11_63820300_+ | intronic |
| ADediting_265166 | chr11_63820304_+ | intronic |
| ADediting_265167 | chr11_63820333_+ | intronic |
| ADediting_265168 | chr11_63820339_+ | intronic |
| ADediting_265169 | chr11_63820931_+ | intronic |
| ADediting_265170 | chr11_63820977_+ | intronic |
| ADediting_265171 | chr11_63820985_+ | intronic |
| ADediting_265172 | chr11_63820986_+ | intronic |
| ADediting_265173 | chr11_63820994_+ | intronic |
| ADediting_265174 | chr11_63820997_+ | intronic |
| ADediting_265175 | chr11_63821001_+ | intronic |
| ADediting_265176 | chr11_63821009_+ | intronic |
| ADediting_265177 | chr11_63821461_+ | intronic |
| ADediting_265178 | chr11_63821621_+ | intronic |
| ADediting_265179 | chr11_63821775_+ | intronic |
| ADediting_265180 | chr11_63821779_+ | intronic |
| ADediting_265181 | chr11_63821802_+ | intronic |
| ADediting_265182 | chr11_63821805_+ | intronic |
| ADediting_265183 | chr11_63821813_+ | intronic |
| ADediting_265184 | chr11_63821816_+ | intronic |
| ADediting_265185 | chr11_63821818_+ | intronic |
| ADediting_265186 | chr11_63821829_+ | intronic |
| ADediting_265187 | chr11_63821834_+ | intronic |
| ADediting_265188 | chr11_63821835_+ | intronic |
| ADediting_265189 | chr11_63821836_+ | intronic |
| ADediting_265190 | chr11_63821842_+ | intronic |
| ADediting_265191 | chr11_63821848_+ | intronic |
| ADediting_265192 | chr11_63821849_+ | intronic |
| ADediting_265193 | chr11_63821852_+ | intronic |
| ADediting_265194 | chr11_63821864_+ | intronic |
| ADediting_265195 | chr11_63821866_+ | intronic |
| ADediting_265196 | chr11_63821875_+ | intronic |
| ADediting_265197 | chr11_63821878_+ | intronic |
| ADediting_265198 | chr11_63821888_+ | intronic |
| ADediting_265199 | chr11_63821906_+ | intronic |
| ADediting_265200 | chr11_63821909_+ | intronic |
| ADediting_265201 | chr11_63821914_+ | intronic |
| ADediting_265202 | chr11_63821915_+ | intronic |
| ADediting_265203 | chr11_63821921_+ | intronic |
| ADediting_265204 | chr11_63821932_+ | intronic |
| ADediting_265205 | chr11_63821934_+ | intronic |
| ADediting_265206 | chr11_63821938_+ | intronic |
| ADediting_265207 | chr11_63821946_+ | intronic |
| ADediting_265208 | chr11_63821959_+ | intronic |
| ADediting_265209 | chr11_63821963_+ | intronic |
| ADediting_265210 | chr11_63821971_+ | intronic |
| ADediting_265211 | chr11_63821984_+ | intronic |
| ADediting_265212 | chr11_63821987_+ | intronic |
| ADediting_265213 | chr11_63822009_+ | intronic |
| ADediting_265214 | chr11_63822010_+ | intronic |
| ADediting_265215 | chr11_63822011_+ | intronic |
| ADediting_265216 | chr11_63822101_+ | intronic |
| ADediting_265217 | chr11_63822110_+ | intronic |
| ADediting_265218 | chr11_63822111_+ | intronic |
| ADediting_265219 | chr11_63822118_+ | intronic |
| ADediting_265220 | chr11_63822128_+ | intronic |
| ADediting_265221 | chr11_63822147_+ | intronic |
| ADediting_265222 | chr11_63822148_+ | intronic |
| ADediting_265223 | chr11_63822153_+ | intronic |
| ADediting_265224 | chr11_63822161_+ | intronic |
| ADediting_265225 | chr11_63822162_+ | intronic |
| ADediting_265226 | chr11_63822172_+ | intronic |
| ADediting_265227 | chr11_63822178_+ | intronic |
| ADediting_265228 | chr11_63822182_+ | intronic |
| ADediting_265229 | chr11_63822183_+ | intronic |
| ADediting_265230 | chr11_63822191_+ | intronic |
| ADediting_265231 | chr11_63822196_+ | intronic |
| ADediting_265232 | chr11_63822197_+ | intronic |
| ADediting_265233 | chr11_63822222_+ | intronic |
| ADediting_265234 | chr11_63822229_+ | intronic |
| ADediting_265235 | chr11_63822238_+ | intronic |
| ADediting_265236 | chr11_63822245_+ | intronic |
| ADediting_265237 | chr11_63822246_+ | intronic |
| ADediting_265238 | chr11_63822251_+ | intronic |
| ADediting_265239 | chr11_63822259_+ | intronic |
| ADediting_265240 | chr11_63822264_+ | intronic |
| ADediting_265241 | chr11_63822269_+ | intronic |
| ADediting_265242 | chr11_63822270_+ | intronic |
| ADediting_265243 | chr11_63822310_+ | intronic |
| ADediting_265244 | chr11_63825970_+ | intronic |
| ADediting_265245 | chr11_63825975_+ | intronic |
| ADediting_265246 | chr11_63826032_+ | intronic |
| ADediting_265247 | chr11_63826056_+ | intronic |
| ADediting_265248 | chr11_63826068_+ | intronic |
| ADediting_265249 | chr11_63826078_+ | intronic |
| ADediting_265250 | chr11_63826124_+ | intronic |
| ADediting_265251 | chr11_63826141_+ | intronic |
| ADediting_265252 | chr11_63826156_+ | intronic |
| ADediting_265253 | chr11_63826157_+ | intronic |
| ADediting_265254 | chr11_63826158_+ | intronic |
| ADediting_265255 | chr11_63826171_+ | intronic |
| ADediting_265256 | chr11_63826183_+ | intronic |
| ADediting_265257 | chr11_63826197_+ | intronic |
| ADediting_265258 | chr11_63826198_+ | intronic |
| ADediting_265259 | chr11_63826210_+ | intronic |
| ADediting_1527546 | chr11_63816035_+ | intronic |
| ADediting_1527547 | chr11_63819432_+ | intronic |
| ADediting_1527548 | chr11_63819520_+ | intronic |
| ADediting_1527549 | chr11_63819596_+ | intronic |
| ADediting_1527550 | chr11_63820221_+ | intronic |
| ADediting_1527551 | chr11_63820343_+ | intronic |
| ADediting_1527552 | chr11_63820358_+ | intronic |
| ADediting_1527553 | chr11_63820937_+ | intronic |
| ADediting_1527554 | chr11_63820941_+ | intronic |
| ADediting_1527555 | chr11_63821017_+ | intronic |
| ADediting_1527556 | chr11_63821350_+ | intronic |
| ADediting_1527557 | chr11_63822317_+ | intronic |
| ADediting_1527558 | chr11_63822348_+ | intronic |
| ADediting_1527559 | chr11_63823738_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_265118 | chr11_63819230_+ | SINE | Alu | Name=AluSx |
| ADediting_265119 | chr11_63819237_+ | SINE | Alu | Name=AluSx |
| ADediting_265120 | chr11_63819269_+ | SINE | Alu | Name=AluSx |
| ADediting_265121 | chr11_63819272_+ | SINE | Alu | Name=AluSx |
| ADediting_265122 | chr11_63819275_+ | SINE | Alu | Name=AluSx |
| ADediting_265123 | chr11_63819288_+ | SINE | Alu | Name=AluSx |
| ADediting_265124 | chr11_63819291_+ | SINE | Alu | Name=AluSx |
| ADediting_265125 | chr11_63819304_+ | SINE | Alu | Name=AluSx |
| ADediting_265126 | chr11_63819311_+ | SINE | Alu | Name=AluSx |
| ADediting_265127 | chr11_63819337_+ | SINE | Alu | Name=AluSx |
| ADediting_265128 | chr11_63819340_+ | SINE | Alu | Name=AluSx |
| ADediting_265129 | chr11_63819350_+ | SINE | Alu | Name=AluSx |
| ADediting_265130 | chr11_63819368_+ | SINE | Alu | Name=AluSx |
| ADediting_265131 | chr11_63819376_+ | SINE | Alu | Name=AluSx |
| ADediting_265132 | chr11_63819377_+ | SINE | Alu | Name=AluSx |
| ADediting_265133 | chr11_63819391_+ | SINE | Alu | Name=AluSx |
| ADediting_265134 | chr11_63819394_+ | SINE | Alu | Name=AluSx |
| ADediting_265135 | chr11_63819400_+ | SINE | Alu | Name=AluSx |
| ADediting_265136 | chr11_63819411_+ | SINE | Alu | Name=AluSx |
| ADediting_265137 | chr11_63819431_+ | SINE | Alu | Name=AluSx |
| ADediting_265138 | chr11_63819433_+ | SINE | Alu | Name=AluSx |
| ADediting_265139 | chr11_63819445_+ | SINE | Alu | Name=AluSx |
| ADediting_265140 | chr11_63819571_+ | SINE | Alu | Name=AluSx |
| ADediting_265141 | chr11_63819590_+ | SINE | Alu | Name=AluSx |
| ADediting_265142 | chr11_63819597_+ | SINE | Alu | Name=AluSx |
| ADediting_265143 | chr11_63819636_+ | SINE | Alu | Name=AluSx |
| ADediting_265144 | chr11_63819686_+ | SINE | Alu | Name=AluSx |
| ADediting_265145 | chr11_63819740_+ | SINE | Alu | Name=AluSx |
| ADediting_265146 | chr11_63819765_+ | SINE | Alu | Name=AluSx |
| ADediting_265147 | chr11_63819771_+ | SINE | Alu | Name=AluSx |
| ADediting_265148 | chr11_63820134_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265149 | chr11_63820142_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265150 | chr11_63820148_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265151 | chr11_63820183_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265152 | chr11_63820203_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265153 | chr11_63820222_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265154 | chr11_63820233_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265155 | chr11_63820236_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265156 | chr11_63820237_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265157 | chr11_63820238_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265158 | chr11_63820246_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265159 | chr11_63820247_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265160 | chr11_63820248_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265161 | chr11_63820251_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265162 | chr11_63820255_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265163 | chr11_63820267_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265164 | chr11_63820277_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265165 | chr11_63820300_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265166 | chr11_63820304_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265167 | chr11_63820333_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265168 | chr11_63820339_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265169 | chr11_63820931_+ | SINE | Alu | Name=AluJo |
| ADediting_265170 | chr11_63820977_+ | SINE | Alu | Name=AluJo |
| ADediting_265171 | chr11_63820985_+ | SINE | Alu | Name=AluJo |
| ADediting_265172 | chr11_63820986_+ | SINE | Alu | Name=AluJo |
| ADediting_265173 | chr11_63820994_+ | SINE | Alu | Name=AluJo |
| ADediting_265174 | chr11_63820997_+ | SINE | Alu | Name=AluJo |
| ADediting_265175 | chr11_63821001_+ | SINE | Alu | Name=AluJo |
| ADediting_265176 | chr11_63821009_+ | SINE | Alu | Name=AluJo |
| ADediting_265177 | chr11_63821461_+ | LTR | ERVL-MaLR | Name=MLT1D |
| ADediting_265178 | chr11_63821621_+ | LINE | L2 | Name=L2b |
| ADediting_265179 | chr11_63821775_+ | SINE | Alu | Name=AluJo |
| ADediting_265180 | chr11_63821779_+ | SINE | Alu | Name=AluJo |
| ADediting_265181 | chr11_63821802_+ | SINE | Alu | Name=AluJo |
| ADediting_265182 | chr11_63821805_+ | SINE | Alu | Name=AluJo |
| ADediting_265183 | chr11_63821813_+ | SINE | Alu | Name=AluJo |
| ADediting_265184 | chr11_63821816_+ | SINE | Alu | Name=AluJo |
| ADediting_265185 | chr11_63821818_+ | SINE | Alu | Name=AluJo |
| ADediting_265186 | chr11_63821829_+ | SINE | Alu | Name=AluJo |
| ADediting_265187 | chr11_63821834_+ | SINE | Alu | Name=AluJo |
| ADediting_265188 | chr11_63821835_+ | SINE | Alu | Name=AluJo |
| ADediting_265189 | chr11_63821836_+ | SINE | Alu | Name=AluJo |
| ADediting_265190 | chr11_63821842_+ | SINE | Alu | Name=AluJo |
| ADediting_265191 | chr11_63821848_+ | SINE | Alu | Name=AluJo |
| ADediting_265192 | chr11_63821849_+ | SINE | Alu | Name=AluJo |
| ADediting_265193 | chr11_63821852_+ | SINE | Alu | Name=AluJo |
| ADediting_265194 | chr11_63821864_+ | SINE | Alu | Name=AluJo |
| ADediting_265195 | chr11_63821866_+ | SINE | Alu | Name=AluJo |
| ADediting_265196 | chr11_63821875_+ | SINE | Alu | Name=AluJo |
| ADediting_265197 | chr11_63821878_+ | SINE | Alu | Name=AluJo |
| ADediting_265198 | chr11_63821888_+ | SINE | Alu | Name=AluJo |
| ADediting_265199 | chr11_63821906_+ | SINE | Alu | Name=AluJo |
| ADediting_265200 | chr11_63821909_+ | SINE | Alu | Name=AluJo |
| ADediting_265201 | chr11_63821914_+ | SINE | Alu | Name=AluJo |
| ADediting_265202 | chr11_63821915_+ | SINE | Alu | Name=AluJo |
| ADediting_265203 | chr11_63821921_+ | SINE | Alu | Name=AluJo |
| ADediting_265204 | chr11_63821932_+ | SINE | Alu | Name=AluJo |
| ADediting_265205 | chr11_63821934_+ | SINE | Alu | Name=AluJo |
| ADediting_265206 | chr11_63821938_+ | SINE | Alu | Name=AluJo |
| ADediting_265207 | chr11_63821946_+ | SINE | Alu | Name=AluJo |
| ADediting_265208 | chr11_63821959_+ | SINE | Alu | Name=AluJo |
| ADediting_265209 | chr11_63821963_+ | SINE | Alu | Name=AluJo |
| ADediting_265210 | chr11_63821971_+ | SINE | Alu | Name=AluJo |
| ADediting_265211 | chr11_63821984_+ | SINE | Alu | Name=AluJo |
| ADediting_265212 | chr11_63821987_+ | SINE | Alu | Name=AluJo |
| ADediting_265213 | chr11_63822009_+ | SINE | Alu | Name=AluJo |
| ADediting_265214 | chr11_63822010_+ | SINE | Alu | Name=AluJo |
| ADediting_265215 | chr11_63822011_+ | SINE | Alu | Name=AluJo |
| ADediting_265216 | chr11_63822101_+ | SINE | Alu | Name=AluJr |
| ADediting_265217 | chr11_63822110_+ | SINE | Alu | Name=AluJr |
| ADediting_265218 | chr11_63822111_+ | SINE | Alu | Name=AluJr |
| ADediting_265219 | chr11_63822118_+ | SINE | Alu | Name=AluJr |
| ADediting_265220 | chr11_63822128_+ | SINE | Alu | Name=AluJr |
| ADediting_265221 | chr11_63822147_+ | SINE | Alu | Name=AluJr |
| ADediting_265222 | chr11_63822148_+ | SINE | Alu | Name=AluJr |
| ADediting_265223 | chr11_63822153_+ | SINE | Alu | Name=AluJr |
| ADediting_265224 | chr11_63822161_+ | SINE | Alu | Name=AluJr |
| ADediting_265225 | chr11_63822162_+ | SINE | Alu | Name=AluJr |
| ADediting_265226 | chr11_63822172_+ | SINE | Alu | Name=AluJr |
| ADediting_265227 | chr11_63822178_+ | SINE | Alu | Name=AluJr |
| ADediting_265228 | chr11_63822182_+ | SINE | Alu | Name=AluJr |
| ADediting_265229 | chr11_63822183_+ | SINE | Alu | Name=AluJr |
| ADediting_265230 | chr11_63822191_+ | SINE | Alu | Name=AluJr |
| ADediting_265231 | chr11_63822196_+ | SINE | Alu | Name=AluJr |
| ADediting_265232 | chr11_63822197_+ | SINE | Alu | Name=AluJr |
| ADediting_265233 | chr11_63822222_+ | SINE | Alu | Name=AluJr |
| ADediting_265234 | chr11_63822229_+ | SINE | Alu | Name=AluJr |
| ADediting_265235 | chr11_63822238_+ | SINE | Alu | Name=AluJr |
| ADediting_265236 | chr11_63822245_+ | SINE | Alu | Name=AluJr |
| ADediting_265237 | chr11_63822246_+ | SINE | Alu | Name=AluJr |
| ADediting_265238 | chr11_63822251_+ | SINE | Alu | Name=AluJr |
| ADediting_265239 | chr11_63822259_+ | SINE | Alu | Name=AluJr |
| ADediting_265240 | chr11_63822264_+ | SINE | Alu | Name=AluJr |
| ADediting_265241 | chr11_63822269_+ | SINE | Alu | Name=AluJr |
| ADediting_265242 | chr11_63822270_+ | SINE | Alu | Name=AluJr |
| ADediting_265243 | chr11_63822310_+ | SINE | Alu | Name=AluJr |
| ADediting_265244 | chr11_63825970_+ | SINE | Alu | Name=AluSz |
| ADediting_265245 | chr11_63825975_+ | SINE | Alu | Name=AluSz |
| ADediting_265246 | chr11_63826032_+ | SINE | Alu | Name=AluSz |
| ADediting_265247 | chr11_63826056_+ | SINE | Alu | Name=AluSz |
| ADediting_265248 | chr11_63826068_+ | SINE | Alu | Name=AluSz |
| ADediting_265249 | chr11_63826078_+ | SINE | Alu | Name=AluSz |
| ADediting_265250 | chr11_63826124_+ | SINE | Alu | Name=AluSz |
| ADediting_265251 | chr11_63826141_+ | SINE | Alu | Name=AluSz |
| ADediting_265252 | chr11_63826156_+ | SINE | Alu | Name=AluSz |
| ADediting_265253 | chr11_63826157_+ | SINE | Alu | Name=AluSz |
| ADediting_265254 | chr11_63826158_+ | SINE | Alu | Name=AluSz |
| ADediting_265255 | chr11_63826171_+ | SINE | Alu | Name=AluSz |
| ADediting_265256 | chr11_63826183_+ | SINE | Alu | Name=AluSz |
| ADediting_265257 | chr11_63826197_+ | SINE | Alu | Name=AluSz |
| ADediting_265258 | chr11_63826198_+ | SINE | Alu | Name=AluSz |
| ADediting_265259 | chr11_63826210_+ | SINE | Alu | Name=AluSz |
| ADediting_1527546 | chr11_63816035_+ | SINE | Alu | Name=AluSp |
| ADediting_1527547 | chr11_63819432_+ | SINE | Alu | Name=AluSx |
| ADediting_1527548 | chr11_63819520_+ | SINE | Alu | Name=AluSx |
| ADediting_1527549 | chr11_63819596_+ | SINE | Alu | Name=AluSx |
| ADediting_1527550 | chr11_63820221_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1527551 | chr11_63820343_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1527552 | chr11_63820358_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1527553 | chr11_63820937_+ | SINE | Alu | Name=AluJo |
| ADediting_1527554 | chr11_63820941_+ | SINE | Alu | Name=AluJo |
| ADediting_1527555 | chr11_63821017_+ | SINE | Alu | Name=AluJo |
| ADediting_1527556 | chr11_63821350_+ | LTR | ERVL-MaLR | Name=MLT1D |
| ADediting_1527557 | chr11_63822317_+ | SINE | Alu | Name=AluJr |
| ADediting_1527558 | chr11_63822348_+ | SINE | Alu | Name=AluJr |
| ADediting_1527559 | chr11_63823738_+ | SINE | Alu | Name=AluY |
Top |
RNA A-to-I editing events in the alternative splicing sites for SPINDOC |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPINDOC |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SPINDOC |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SPINDOC |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000168005.9 | ENST00000294244.9 | SPINDOC-201 | hsa-miR-5688 | chr11 | 63827414 | 63827420 | 7mer-m8 | 63827400 | 63827421 | 146 | -10.83 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168005.9 | ENST00000540893.1 | SPINDOC-203 | hsa-miR-641 | chr11 | 63823285 | 63823291 | 7mer-m8 | 63823267 | 63823292 | 148 | -20.07 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000168005.9 | ENST00000294244.9 | SPINDOC-201 | hsa-miR-5585-3p | chr11 | 63827633 | 63827639 | 7mer-m8 | 63827620 | 63827640 | 143 | -18.37 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for SPINDOC |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for SPINDOC |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1527558 | chr11_63822348_+ | 0.0382389587425369 | 0.169393565019228 | 1.56506845874342e-05 | 0.344685681091934 | 0.179497772864728 | 0.110186310123444 |
| CER | ADediting_265121 | chr11_63819272_+ | 0.0249238480170174 | 0.183086965554348 | 8.04685777905841e-06 | 0.355475774926168 | 0.0303550108966571 | 0.176889443334896 |
| DLPFC | ADediting_265124 | chr11_63819291_+ | 0.343053059998473 | 0.0540302289944866 | 0.352799991956007 | -0.0529502949969816 | 7.2668315332943e-11 | 0.359067532979075 |
| CER | ADediting_265124 | chr11_63819291_+ | 0.00601388274790408 | 0.223321797541678 | 3.97147148223425e-05 | 0.328878927028265 | 0.896767034144721 | 0.0106828176707332 |
| CER | ADediting_265125 | chr11_63819304_+ | 0.000701295317403977 | 0.273702817205212 | 5.02697717723653e-06 | 0.362875548220019 | 0.170537413207418 | 0.112484660435781 |
| DLPFC | ADediting_265128 | chr11_63819340_+ | 0.98677491112407 | 0.000945269143091173 | 0.345723152578072 | -0.0537324780504318 | 4.16995945594307e-08 | 0.305212161573745 |
| CER | ADediting_265129 | chr11_63819350_+ | 0.000111841825099138 | 0.310218181320452 | 1.49385159895617e-07 | 0.413074497981255 | 0.0449504348690301 | 0.163979027880684 |
| CER | ADediting_265130 | chr11_63819368_+ | 0.0272915719780866 | 0.180256067200119 | 1.2739662919982e-06 | 0.383474226750401 | 0.0668113197319676 | 0.150065744264917 |
| DLPFC | ADediting_265131 | chr11_63819376_+ | 0.529621025207992 | -0.0358345023363833 | 0.0613067218182485 | -0.10640931390465 | 2.42541725108974e-08 | 0.310241377459447 |
| CER | ADediting_265131 | chr11_63819376_+ | 0.121720179667465 | 0.126910657072666 | 4.75826993722507e-05 | 0.325708028091859 | 0.0126272794783007 | 0.203213847960586 |
| CER | ADediting_265141 | chr11_63819590_+ | 0.251693096283178 | 0.0941702831340179 | 0.000190481039269038 | 0.300117740599332 | 0.417212248737762 | 0.0667240041638169 |
| CER | ADediting_265143 | chr11_63819636_+ | 0.0138497666294788 | 0.200582298820216 | 2.64257789523151e-06 | 0.372701668241222 | 0.292543525994284 | 0.0865034470508696 |
| DLPFC | ADediting_265144 | chr11_63819686_+ | 0.125590905058844 | 0.0871824714335313 | 0.664161062125768 | 0.0247557341581962 | 1.70004454466953e-08 | 0.313488841921949 |
| DLPFC | ADediting_265154 | chr11_63820233_+ | 0.389479031130763 | 0.0490453776958673 | 0.266649513641317 | -0.0632822423694932 | 3.74859203593714e-15 | 0.426774722643498 |
| CER | ADediting_265169 | chr11_63820931_+ | 5.98913409312975e-05 | 0.321620518182801 | 6.11963534670689e-09 | 0.452503912101369 | 0.50626231167445 | 0.0546868342843859 |
| CER | ADediting_265170 | chr11_63820977_+ | 0.0118610527716051 | 0.204979446818145 | 2.1293233366869e-06 | 0.37593043878721 | 0.0361203629122724 | 0.171268953773566 |
| CER | ADediting_265171 | chr11_63820985_+ | 0.000178922320328831 | 0.301324412178998 | 1.53297148636722e-07 | 0.412734036101027 | 0.189866533307265 | 0.107629735490172 |
| CER | ADediting_265172 | chr11_63820986_+ | 0.0199533043783067 | 0.189873531787713 | 1.74124283977651e-05 | 0.342917989505696 | 0.319645724778802 | 0.0818046621311934 |
| CER | ADediting_265173 | chr11_63820994_+ | 1.07571329895162e-05 | 0.350815882330376 | 8.95123712650917e-10 | 0.474017260863639 | 0.0959659489409066 | 0.136429896184823 |
| CER | ADediting_265176 | chr11_63821009_+ | 6.05317471148698e-05 | 0.32143012568116 | 1.22753960608115e-05 | 0.348671851424374 | 0.153652134357332 | 0.117071973427719 |
| DLPFC | ADediting_265181 | chr11_63821802_+ | 0.579439067460891 | 0.0315964681712851 | 0.685986051673818 | -0.0230532435021477 | 5.22143752466711e-10 | 0.343433122852948 |
| CER | ADediting_265181 | chr11_63821802_+ | 0.000289658633595627 | 0.291899484704857 | 7.52062071326689e-08 | 0.421978341296931 | 0.0271975562247678 | 0.180364392047974 |
| CER | ADediting_265184 | chr11_63821816_+ | 0.00638685427218905 | 0.221753050128519 | 0.000165066142233367 | 0.30287044303489 | 0.951585171203692 | 0.0049992532298699 |
| CER | ADediting_265185 | chr11_63821818_+ | 0.00108481998627739 | 0.264246483685767 | 2.25717178416654e-06 | 0.375062058548812 | 0.135958890007131 | 0.122306069087917 |
| CER | ADediting_265186 | chr11_63821829_+ | 3.71604794530384e-05 | 0.330036385929842 | 1.29739001243271e-09 | 0.469977954789196 | 0.785257066220118 | 0.0224323203172118 |
| CER | ADediting_265187 | chr11_63821834_+ | 0.000980767914070874 | 0.266462657067574 | 2.43709796491415e-05 | 0.337275305757755 | 0.346158126075986 | 0.0774517816658752 |
| CER | ADediting_265190 | chr11_63821842_+ | 0.00617952499534104 | 0.222614688356999 | 1.90953063195044e-05 | 0.341380441082586 | 0.281941453398828 | 0.0884199172270239 |
| CER | ADediting_265191 | chr11_63821848_+ | 0.000875311195760972 | 0.268940572164453 | 1.37043775333573e-05 | 0.346871570062534 | 0.105563569011077 | 0.132671696663653 |
| CER | ADediting_265192 | chr11_63821849_+ | 0.000510053731980365 | 0.280398080970101 | 3.16673151226739e-06 | 0.369969277916195 | 0.114094424119178 | 0.129550361577976 |
| CER | ADediting_265193 | chr11_63821852_+ | 7.25457739908143e-05 | 0.318169517941994 | 9.04067636933801e-08 | 0.419615196240592 | 0.26184228274612 | 0.0921907524392326 |
| CER | ADediting_265195 | chr11_63821866_+ | 0.00403720236680471 | 0.233462272237089 | 2.74753858975012e-05 | 0.33523624261806 | 0.355303319648377 | -0.075999533288093 |
| CER | ADediting_265208 | chr11_63821959_+ | 0.000135448449708176 | 0.306627436740925 | 2.48013425631845e-06 | 0.373653824960739 | 0.853862442351198 | 0.0151652543895766 |
| CER | ADediting_265209 | chr11_63821963_+ | 0.00122147538986624 | 0.261614503126721 | 9.61311561172584e-05 | 0.313024277255464 | 0.667134559365817 | 0.0354013465031937 |
| CER | ADediting_265211 | chr11_63821984_+ | 3.32703489789718e-05 | 0.331951513460181 | 6.34848657130735e-07 | 0.39341173205862 | 0.0843274414925665 | 0.141410216883938 |
| CER | ADediting_265212 | chr11_63821987_+ | 0.00045264852943359 | 0.282866186822106 | 1.71422368948598e-08 | 0.440332213342641 | 0.209127541663669 | 0.103138445578288 |
| DLPFC | ADediting_265213 | chr11_63822009_+ | 0.636978114406408 | 0.0269075608113571 | 0.100129593522024 | -0.0935587619960749 | 1.1345278782998e-15 | 0.434020214713728 |
| CER | ADediting_265213 | chr11_63822009_+ | 2.20781344055879e-05 | 0.338944961750682 | 2.06748982966215e-05 | 0.340049358824816 | 0.104174455248208 | 0.13319851977323 |
| DLPFC | ADediting_265214 | chr11_63822010_+ | 0.933030621585493 | -0.00479205451510061 | 0.0937135462625935 | -0.0953657233518701 | 9.02425533798424e-10 | 0.338937863290382 |
| CER | ADediting_265214 | chr11_63822010_+ | 4.43937792003042e-07 | 0.398391821600033 | 7.4464390774738e-08 | 0.422105081034222 | 0.0388904222654236 | 0.16883448468304 |
| CER | ADediting_265217 | chr11_63822110_+ | 0.00188915306437446 | 0.251704067477934 | 1.49653749697791e-07 | 0.413050851205146 | 0.0123743071887752 | 0.203786121755061 |
| CER | ADediting_265218 | chr11_63822111_+ | 0.000450897001548471 | 0.282945950162891 | 3.01899572146285e-06 | 0.370693146993524 | 0.0593662307318751 | 0.154315545053264 |
| CER | ADediting_265219 | chr11_63822118_+ | 0.0146321570884764 | 0.199002821898041 | 0.000141934247641558 | 0.305743396885641 | 0.0910166074562586 | 0.138485536220687 |
| CER | ADediting_265226 | chr11_63822172_+ | 0.000357793055053532 | 0.287662165808446 | 2.13561185097895e-06 | 0.375886580676592 | 0.226133388223586 | 0.0994136747419264 |
| DLPFC | ADediting_265232 | chr11_63822197_+ | 0.136306536499923 | 0.0847986437982999 | 0.653605854969422 | -0.025586963621006 | 2.13636014979344e-10 | 0.350624804070275 |
| CER | ADediting_265238 | chr11_63822251_+ | 0.150607105342198 | 0.117939034528886 | 7.28606633484092e-05 | 0.318091055938005 | 0.306456544083113 | 0.0840572196501578 |
| DLPFC | ADediting_265240 | chr11_63822264_+ | 0.927163386748728 | -0.00521300829745386 | 0.151230515370654 | -0.0817075295627843 | 2.348094654103e-08 | 0.310539096637644 |
| CER | ADediting_265244 | chr11_63825970_+ | 0.0437184962737562 | 0.164919676682795 | 1.97225874966106e-05 | 0.340839850273694 | 0.300680590837032 | 0.0850636773106541 |
| DLPFC | ADediting_265245 | chr11_63825975_+ | 0.0125749955211836 | 0.141596816489556 | 0.57105916392411 | 0.0322966766758344 | 7.11598520163387e-12 | 0.376459155220517 |
| DLPFC | ADediting_265246 | chr11_63826032_+ | 0.0232896641475229 | 0.128833649859387 | 0.28163705540787 | 0.0613397597195174 | 1.76608533586415e-09 | 0.333321006706737 |
| DLPFC | ADediting_265249 | chr11_63826078_+ | 0.00711828102341583 | 0.152573710879452 | 0.975097408236952 | -0.00178013042618014 | 3.51777976795717e-21 | 0.501853902047086 |
| CER | ADediting_265251 | chr11_63826141_+ | 0.0314816474325526 | 0.175723850439196 | 6.60750324747357e-05 | 0.319856750840397 | 0.129942886695338 | 0.124204034533263 |
| DLPFC | ADediting_265258 | chr11_63826198_+ | 0.00851711373323805 | 0.149187918192658 | 0.67462170665174 | 0.0239370873038419 | 2.62944227848408e-15 | 0.428942641491742 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.58541219781158e-18 | 0.468442320787693 | 2.07706735393346e-31 | 0.597698915377395 | 0.0464076978372994 | 0.113212462232862 |
| AC | 1.46286470606812e-19 | 0.530651940683375 | 1.56287280243502e-14 | 0.460594317487997 | 1.1110466126124e-11 | 0.412327026023963 |
| PCC | 2.58455956402146e-20 | 0.603235114400567 | 1.13924813514476e-25 | 0.664199284137078 | 0.236035838395805 | 0.0861462263546238 |
| CER | 0.00011921693398456 | 0.309025921608265 | 1.09022673579407e-12 | 0.539195272262367 | 0.0611628932459643 | 0.153251651464972 |
| TCX | 1.52837349477198e-05 | 0.345077403334374 | 9.72165431880707e-08 | 0.418677928321234 | 0.395671856096904 | 0.0698508714134703 |
| FP | 6.81181346459624e-09 | 0.417344463503893 | 6.98438261269392e-07 | 0.361776242951537 | 1.73382432480749e-06 | 0.349532757972311 |
| IFG | 4.14593708107544e-07 | 0.824003960375941 | 9.86613726777370e-10 | 0.899362150899543 | 0.0892531733829793 | 0.346982230722939 |
| STG | 2.04078496685804e-12 | 0.674339244732024 | 8.37583620610554e-07 | 0.507445307458058 | 0.0127243218706031 | 0.270791427821996 |
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Relation with AD stages for SPINDOC |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_265121 | chr11_63819272_+ | 0.000342384795251105 | 0.338293396048288 |
| CER | ADediting_265217 | chr11_63822110_+ | 0.000395983458685593 | 0.334898536921808 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 3.03670093108954e-05 | 0.389862566881719 |
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RelatedDrugs for SPINDOC |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SPINDOC |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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