|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for TRIM69 |
 Gene summary |
| Gene information | Gene symbol | TRIM69 | Gene ID | 140691 |
| Gene name | tripartite motif containing 69 | |
| Synonyms | HSD-34|HSD34|RNF36|Trif | |
| Cytomap | 15q21.1 | |
| Type of gene | protein-coding | |
| Description | E3 ubiquitin-protein ligase TRIM69RFP-like domain-containing protein trimlessRING-type E3 ubiquitin transferase TRIM69ring finger protein 36 | |
| Modification date | 20200313 | |
| UniProtAcc | Q86WT6, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for TRIM69 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_478587(44732984, +), ADediting_478588(44733078, +), ADediting_478589(44733087, +), ADediting_478590(44733090, +), ADediting_478591(44733100, +), ADediting_478592(44733106, +), ADediting_478593(44733113, +), ADediting_478594(44733160, +), ADediting_478595(44733168, +), ADediting_478596(44733221, +), ADediting_478597(44733222, +), ADediting_478598(44733223, +), ADediting_478599(44733235, +), ADediting_478600(44733427, +), ADediting_478601(44733435, +), ADediting_478602(44733436, +), ADediting_478603(44733441, +), ADediting_478604(44733452, +), ADediting_478605(44733481, +), ADediting_478606(44733495, +), ADediting_478607(44733504, +), ADediting_478608(44733505, +), ADediting_478609(44733512, +), ADediting_478610(44733513, +), ADediting_478611(44733515, +), ADediting_478612(44733526, +), ADediting_478613(44733529, +), ADediting_478614(44733530, +), ADediting_478615(44733539, +), ADediting_478616(44733543, +), ADediting_478617(44733569, +), ADediting_478618(44733570, +), ADediting_478619(44733575, +), ADediting_478620(44733579, +), ADediting_478621(44733596, +), ADediting_478622(44733605, +), ADediting_478623(44733610, +), ADediting_478624(44733611, +), ADediting_478625(44733616, +), ADediting_478626(44733622, +), ADediting_478627(44733635, +), ADediting_478628(44733640, +), ADediting_478629(44733642, +), ADediting_478630(44733672, +), ADediting_478631(44733678, +), ADediting_478632(44734251, +), ADediting_478633(44734399, +), ADediting_478634(44734436, +), ADediting_478635(44734461, +), ADediting_478636(44734488, +), ADediting_478637(44748570, +), ADediting_478638(44748711, +), ADediting_478639(44749154, +), ADediting_478640(44749166, +), ADediting_478641(44766779, +), ADediting_478642(44766801, +), ADediting_478643(44766802, +), ADediting_478644(44766824, +), ADediting_478645(44766828, +), ADediting_478646(44766847, +), ADediting_478647(44766855, +), ADediting_478648(44766856, +), ADediting_478649(44766870, +), ADediting_478650(44766871, +), ADediting_478651(44766881, +), ADediting_478652(44766930, +), ADediting_478653(44766939, +), ADediting_478654(44766965, +), ADediting_478655(44766988, +), ADediting_1539226(44733016, +), ADediting_1539227(44733137, +), ADediting_1539228(44733146, +), ADediting_1539229(44733175, +), ADediting_1539230(44733538, +), |
Top |
RNA editing positional annotations for TRIM69 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_478587 | chr15_44732984_+ | intronic |
| ADediting_478588 | chr15_44733078_+ | intronic |
| ADediting_478589 | chr15_44733087_+ | intronic |
| ADediting_478590 | chr15_44733090_+ | intronic |
| ADediting_478591 | chr15_44733100_+ | intronic |
| ADediting_478592 | chr15_44733106_+ | intronic |
| ADediting_478593 | chr15_44733113_+ | intronic |
| ADediting_478594 | chr15_44733160_+ | intronic |
| ADediting_478595 | chr15_44733168_+ | intronic |
| ADediting_478596 | chr15_44733221_+ | intronic |
| ADediting_478597 | chr15_44733222_+ | intronic |
| ADediting_478598 | chr15_44733223_+ | intronic |
| ADediting_478599 | chr15_44733235_+ | intronic |
| ADediting_478600 | chr15_44733427_+ | intronic |
| ADediting_478601 | chr15_44733435_+ | intronic |
| ADediting_478602 | chr15_44733436_+ | intronic |
| ADediting_478603 | chr15_44733441_+ | intronic |
| ADediting_478604 | chr15_44733452_+ | intronic |
| ADediting_478605 | chr15_44733481_+ | intronic |
| ADediting_478606 | chr15_44733495_+ | intronic |
| ADediting_478607 | chr15_44733504_+ | intronic |
| ADediting_478608 | chr15_44733505_+ | intronic |
| ADediting_478609 | chr15_44733512_+ | intronic |
| ADediting_478610 | chr15_44733513_+ | intronic |
| ADediting_478611 | chr15_44733515_+ | intronic |
| ADediting_478612 | chr15_44733526_+ | intronic |
| ADediting_478613 | chr15_44733529_+ | intronic |
| ADediting_478614 | chr15_44733530_+ | intronic |
| ADediting_478615 | chr15_44733539_+ | intronic |
| ADediting_478616 | chr15_44733543_+ | intronic |
| ADediting_478617 | chr15_44733569_+ | intronic |
| ADediting_478618 | chr15_44733570_+ | intronic |
| ADediting_478619 | chr15_44733575_+ | intronic |
| ADediting_478620 | chr15_44733579_+ | intronic |
| ADediting_478621 | chr15_44733596_+ | intronic |
| ADediting_478622 | chr15_44733605_+ | intronic |
| ADediting_478623 | chr15_44733610_+ | intronic |
| ADediting_478624 | chr15_44733611_+ | intronic |
| ADediting_478625 | chr15_44733616_+ | intronic |
| ADediting_478626 | chr15_44733622_+ | intronic |
| ADediting_478627 | chr15_44733635_+ | intronic |
| ADediting_478628 | chr15_44733640_+ | intronic |
| ADediting_478629 | chr15_44733642_+ | intronic |
| ADediting_478630 | chr15_44733672_+ | intronic |
| ADediting_478631 | chr15_44733678_+ | intronic |
| ADediting_478632 | chr15_44734251_+ | intronic |
| ADediting_478633 | chr15_44734399_+ | intronic |
| ADediting_478634 | chr15_44734436_+ | intronic |
| ADediting_478635 | chr15_44734461_+ | intronic |
| ADediting_478636 | chr15_44734488_+ | intronic |
| ADediting_478637 | chr15_44748570_+ | intronic |
| ADediting_478638 | chr15_44748711_+ | intronic |
| ADediting_478639 | chr15_44749154_+ | intronic |
| ADediting_478640 | chr15_44749166_+ | intronic |
| ADediting_478641 | chr15_44766779_+ | intronic |
| ADediting_478642 | chr15_44766801_+ | intronic |
| ADediting_478643 | chr15_44766802_+ | intronic |
| ADediting_478644 | chr15_44766824_+ | intronic |
| ADediting_478645 | chr15_44766828_+ | intronic |
| ADediting_478646 | chr15_44766847_+ | intronic |
| ADediting_478647 | chr15_44766855_+ | intronic |
| ADediting_478648 | chr15_44766856_+ | intronic |
| ADediting_478649 | chr15_44766870_+ | intronic |
| ADediting_478650 | chr15_44766871_+ | intronic |
| ADediting_478651 | chr15_44766881_+ | intronic |
| ADediting_478652 | chr15_44766930_+ | intronic |
| ADediting_478653 | chr15_44766939_+ | intronic |
| ADediting_478654 | chr15_44766965_+ | intronic |
| ADediting_478655 | chr15_44766988_+ | intronic |
| ADediting_1539226 | chr15_44733016_+ | intronic |
| ADediting_1539227 | chr15_44733137_+ | intronic |
| ADediting_1539228 | chr15_44733146_+ | intronic |
| ADediting_1539229 | chr15_44733175_+ | intronic |
| ADediting_1539230 | chr15_44733538_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_478587 | chr15_44732984_+ | SINE | Alu | Name=AluY |
| ADediting_478588 | chr15_44733078_+ | SINE | Alu | Name=AluY |
| ADediting_478589 | chr15_44733087_+ | SINE | Alu | Name=AluY |
| ADediting_478590 | chr15_44733090_+ | SINE | Alu | Name=AluY |
| ADediting_478591 | chr15_44733100_+ | SINE | Alu | Name=AluY |
| ADediting_478592 | chr15_44733106_+ | SINE | Alu | Name=AluY |
| ADediting_478593 | chr15_44733113_+ | SINE | Alu | Name=AluY |
| ADediting_478594 | chr15_44733160_+ | SINE | Alu | Name=AluY |
| ADediting_478595 | chr15_44733168_+ | SINE | Alu | Name=AluY |
| ADediting_478596 | chr15_44733221_+ | SINE | Alu | Name=AluY |
| ADediting_478597 | chr15_44733222_+ | SINE | Alu | Name=AluY |
| ADediting_478598 | chr15_44733223_+ | SINE | Alu | Name=AluY |
| ADediting_478599 | chr15_44733235_+ | SINE | Alu | Name=AluY |
| ADediting_478600 | chr15_44733427_+ | SINE | Alu | Name=AluSz |
| ADediting_478601 | chr15_44733435_+ | SINE | Alu | Name=AluSz |
| ADediting_478602 | chr15_44733436_+ | SINE | Alu | Name=AluSz |
| ADediting_478603 | chr15_44733441_+ | SINE | Alu | Name=AluSz |
| ADediting_478604 | chr15_44733452_+ | SINE | Alu | Name=AluSz |
| ADediting_478605 | chr15_44733481_+ | SINE | Alu | Name=AluSz |
| ADediting_478606 | chr15_44733495_+ | SINE | Alu | Name=AluSz |
| ADediting_478607 | chr15_44733504_+ | SINE | Alu | Name=AluSz |
| ADediting_478608 | chr15_44733505_+ | SINE | Alu | Name=AluSz |
| ADediting_478609 | chr15_44733512_+ | SINE | Alu | Name=AluSz |
| ADediting_478610 | chr15_44733513_+ | SINE | Alu | Name=AluSz |
| ADediting_478611 | chr15_44733515_+ | SINE | Alu | Name=AluSz |
| ADediting_478612 | chr15_44733526_+ | SINE | Alu | Name=AluSz |
| ADediting_478613 | chr15_44733529_+ | SINE | Alu | Name=AluSz |
| ADediting_478614 | chr15_44733530_+ | SINE | Alu | Name=AluSz |
| ADediting_478615 | chr15_44733539_+ | SINE | Alu | Name=AluSz |
| ADediting_478616 | chr15_44733543_+ | SINE | Alu | Name=AluSz |
| ADediting_478617 | chr15_44733569_+ | SINE | Alu | Name=AluSz |
| ADediting_478618 | chr15_44733570_+ | SINE | Alu | Name=AluSz |
| ADediting_478619 | chr15_44733575_+ | SINE | Alu | Name=AluSz |
| ADediting_478620 | chr15_44733579_+ | SINE | Alu | Name=AluSz |
| ADediting_478621 | chr15_44733596_+ | SINE | Alu | Name=AluSz |
| ADediting_478622 | chr15_44733605_+ | SINE | Alu | Name=AluSz |
| ADediting_478623 | chr15_44733610_+ | SINE | Alu | Name=AluSz |
| ADediting_478624 | chr15_44733611_+ | SINE | Alu | Name=AluSz |
| ADediting_478625 | chr15_44733616_+ | SINE | Alu | Name=AluSz |
| ADediting_478626 | chr15_44733622_+ | SINE | Alu | Name=AluSz |
| ADediting_478627 | chr15_44733635_+ | SINE | Alu | Name=AluSz |
| ADediting_478628 | chr15_44733640_+ | SINE | Alu | Name=AluSz |
| ADediting_478629 | chr15_44733642_+ | SINE | Alu | Name=AluSz |
| ADediting_478630 | chr15_44733672_+ | SINE | Alu | Name=AluSz |
| ADediting_478631 | chr15_44733678_+ | SINE | Alu | Name=AluSz |
| ADediting_478632 | chr15_44734251_+ | SINE | Alu | Name=AluJb |
| ADediting_478633 | chr15_44734399_+ | SINE | Alu | Name=AluJb |
| ADediting_478634 | chr15_44734436_+ | SINE | Alu | Name=AluJb |
| ADediting_478635 | chr15_44734461_+ | SINE | Alu | Name=AluJb |
| ADediting_478636 | chr15_44734488_+ | SINE | Alu | Name=AluJb |
| ADediting_478637 | chr15_44748570_+ | SINE | Alu | Name=AluSz |
| ADediting_478638 | chr15_44748711_+ | SINE | Alu | Name=AluSz |
| ADediting_478639 | chr15_44749154_+ | SINE | Alu | Name=AluJb |
| ADediting_478640 | chr15_44749166_+ | SINE | Alu | Name=AluJb |
| ADediting_478641 | chr15_44766779_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478642 | chr15_44766801_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478643 | chr15_44766802_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478644 | chr15_44766824_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478645 | chr15_44766828_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478646 | chr15_44766847_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478647 | chr15_44766855_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478648 | chr15_44766856_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478649 | chr15_44766870_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478650 | chr15_44766871_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478651 | chr15_44766881_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478652 | chr15_44766930_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478653 | chr15_44766939_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478654 | chr15_44766965_+ | SINE | Alu | Name=AluSz6 |
| ADediting_478655 | chr15_44766988_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1539226 | chr15_44733016_+ | SINE | Alu | Name=AluY |
| ADediting_1539227 | chr15_44733137_+ | SINE | Alu | Name=AluY |
| ADediting_1539228 | chr15_44733146_+ | SINE | Alu | Name=AluY |
| ADediting_1539229 | chr15_44733175_+ | SINE | Alu | Name=AluY |
| ADediting_1539230 | chr15_44733538_+ | SINE | Alu | Name=AluSz |
Top |
RNA A-to-I editing events in the alternative splicing sites for TRIM69 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for TRIM69 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TRIM69 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for TRIM69 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1539226 | chr15_44733016_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-106b-3p | chr15 | 44733010 | 44733016 | 7mer-m8 | 44732996 | 44733017 | 147 | -22.9 |
| ADediting_1539229 | chr15_44733175_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7153-3p | chr15 | 44733170 | 44733176 | 7mer-m8 | 44733160 | 44733177 | 140 | -21 |
| ADediting_1539230 | chr15_44733538_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4742-3p | chr15 | 44733532 | 44733539 | 8mer-1a | 44733517 | 44733539 | 142 | -9.18 |
| ADediting_1539230 | chr15_44733538_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4778-5p | chr15 | 44733535 | 44733541 | 7mer-m8 | 44733521 | 44733542 | 152 | -16.23 |
| ADediting_478588 | chr15_44733078_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6089 | chr15 | 44733077 | 44733083 | 7mer-m8 | 44733060 | 44733084 | 169 | -41.89 |
| ADediting_478590 | chr15_44733090_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3614-5p | chr15 | 44733084 | 44733090 | 7mer-m8 | 44733068 | 44733091 | 152 | -25.27 |
| ADediting_478590 | chr15_44733090_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4691-3p | chr15 | 44733088 | 44733094 | 7mer-m8 | 44733068 | 44733095 | 150 | -26.36 |
| ADediting_478591 | chr15_44733100_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-17-3p | chr15 | 44733097 | 44733103 | 7mer-m8 | 44733082 | 44733104 | 158 | -20.42 |
| ADediting_478592 | chr15_44733106_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6720-3p | chr15 | 44733101 | 44733107 | 7mer-m8 | 44733087 | 44733108 | 152 | -20.67 |
| ADediting_478592 | chr15_44733106_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-9899 | chr15 | 44733103 | 44733110 | 8mer-1a | 44733088 | 44733110 | 154 | -25.46 |
| ADediting_478593 | chr15_44733113_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6786-5p | chr15 | 44733107 | 44733113 | 7mer-m8 | 44733093 | 44733114 | 151 | -27.13 |
| ADediting_478595 | chr15_44733168_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-548s | chr15 | 44733166 | 44733172 | 7mer-m8 | 44733151 | 44733173 | 149 | -14.18 |
| ADediting_478597 | chr15_44733222_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-2276-5p | chr15 | 44733220 | 44733226 | 7mer-m8 | 44733206 | 44733227 | 140 | -21.75 |
| ADediting_478597 | chr15_44733222_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-326 | chr15 | 44733218 | 44733224 | 7mer-m8 | 44733206 | 44733225 | 140 | -19.39 |
| ADediting_478597 | chr15_44733222_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-330-5p | chr15 | 44733218 | 44733224 | 7mer-m8 | 44733204 | 44733225 | 140 | -23.49 |
| ADediting_478597 | chr15_44733222_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-637 | chr15 | 44733216 | 44733223 | 8mer-1a | 44733200 | 44733223 | 143 | -27.08 |
| ADediting_478598 | chr15_44733223_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3189-3p | chr15 | 44733218 | 44733224 | 7mer-m8 | 44733206 | 44733225 | 145 | -29.95 |
| ADediting_478598 | chr15_44733223_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6769a-3p | chr15 | 44733222 | 44733228 | 7mer-m8 | 44733209 | 44733229 | 140 | -19.77 |
| ADediting_478600 | chr15_44733427_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4634 | chr15 | 44733425 | 44733431 | 7mer-m8 | 44733413 | 44733432 | 151 | -24.1 |
| ADediting_478601 | chr15_44733435_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-513a-5p | chr15 | 44733430 | 44733436 | 7mer-m8 | 44733420 | 44733437 | 144 | -16.68 |
| ADediting_478601 | chr15_44733435_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-638 | chr15 | 44733435 | 44733441 | 7mer-1a | 44733417 | 44733441 | 159 | -35.77 |
| ADediting_478602 | chr15_44733436_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-8052 | chr15 | 44733435 | 44733441 | 7mer-1a | 44733423 | 44733441 | 140 | -24.15 |
| ADediting_478603 | chr15_44733441_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-371a-3p | chr15 | 44733440 | 44733446 | 7mer-m8 | 44733425 | 44733447 | 145 | -17.36 |
| ADediting_478604 | chr15_44733452_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3943 | chr15 | 44733450 | 44733456 | 7mer-m8 | 44733436 | 44733457 | 143 | -22.28 |
| ADediting_478608 | chr15_44733505_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3190-5p | chr15 | 44733499 | 44733505 | 7mer-m8 | 44733487 | 44733506 | 154 | -19.64 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-152-5p | chr15 | 44733511 | 44733517 | 7mer-m8 | 44733496 | 44733518 | 148 | -16.1 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4727-5p | chr15 | 44733508 | 44733515 | 8mer-1a | 44733495 | 44733515 | 150 | -16 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4769-3p | chr15 | 44733507 | 44733514 | 8mer-1a | 44733493 | 44733514 | 140 | -13.73 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6738-3p | chr15 | 44733509 | 44733515 | 7mer-m8 | 44733492 | 44733516 | 141 | -13.97 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6817-5p | chr15 | 44733507 | 44733514 | 8mer-1a | 44733488 | 44733514 | 145 | -24.1 |
| ADediting_478611 | chr15_44733515_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-1251-3p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733493 | 44733517 | 143 | -17.68 |
| ADediting_478611 | chr15_44733515_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4508 | chr15 | 44733514 | 44733520 | 7mer-m8 | 44733505 | 44733521 | 144 | -23.33 |
| ADediting_478612 | chr15_44733526_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-374b-3p | chr15 | 44733524 | 44733531 | 8mer-1a | 44733506 | 44733531 | 143 | -11.25 |
| ADediting_478613 | chr15_44733529_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-222-5p | chr15 | 44733524 | 44733531 | 8mer-1a | 44733510 | 44733531 | 140 | -9.13 |
| ADediting_478613 | chr15_44733529_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-30a-3p | chr15 | 44733526 | 44733533 | 8mer-1a | 44733507 | 44733533 | 153 | -16.07 |
| ADediting_478613 | chr15_44733529_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-30d-3p | chr15 | 44733526 | 44733533 | 8mer-1a | 44733507 | 44733533 | 154 | -16.24 |
| ADediting_478613 | chr15_44733529_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-30e-3p | chr15 | 44733526 | 44733533 | 8mer-1a | 44733511 | 44733533 | 149 | -11.42 |
| ADediting_478613 | chr15_44733529_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-936 | chr15 | 44733523 | 44733530 | 8mer-1a | 44733508 | 44733530 | 155 | -18.6 |
| ADediting_478614 | chr15_44733530_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-325 | chr15 | 44733524 | 44733531 | 8mer-1a | 44733509 | 44733531 | 141 | -11.08 |
| ADediting_478615 | chr15_44733539_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-643 | chr15 | 44733533 | 44733540 | 8mer-1a | 44733518 | 44733540 | 143 | -11.13 |
| ADediting_478616 | chr15_44733543_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3157-5p | chr15 | 44733542 | 44733548 | 7mer-m8 | 44733528 | 44733549 | 148 | -16.54 |
| ADediting_478617 | chr15_44733569_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-513a-5p | chr15 | 44733564 | 44733570 | 7mer-m8 | 44733554 | 44733571 | 144 | -17.35 |
| ADediting_478617 | chr15_44733569_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-638 | chr15 | 44733569 | 44733575 | 7mer-1a | 44733551 | 44733575 | 159 | -33.51 |
| ADediting_478618 | chr15_44733570_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-8052 | chr15 | 44733569 | 44733575 | 7mer-1a | 44733553 | 44733575 | 143 | -21.76 |
| ADediting_478620 | chr15_44733579_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-1207-3p | chr15 | 44733573 | 44733579 | 7mer-m8 | 44733563 | 44733580 | 140 | -12.56 |
| ADediting_478620 | chr15_44733579_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-646 | chr15 | 44733575 | 44733581 | 7mer-m8 | 44733564 | 44733582 | 145 | -16.24 |
| ADediting_478621 | chr15_44733596_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4469 | chr15 | 44733594 | 44733601 | 8mer-1a | 44733580 | 44733601 | 160 | -26.48 |
| ADediting_478621 | chr15_44733596_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4667-3p | chr15 | 44733592 | 44733599 | 8mer-1a | 44733579 | 44733599 | 159 | -30.34 |
| ADediting_478621 | chr15_44733596_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5193 | chr15 | 44733591 | 44733597 | 7mer-m8 | 44733580 | 44733598 | 150 | -25.47 |
| ADediting_478621 | chr15_44733596_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6867-3p | chr15 | 44733595 | 44733602 | 8mer-1a | 44733582 | 44733602 | 159 | -23.74 |
| ADediting_478624 | chr15_44733611_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-2467-5p | chr15 | 44733609 | 44733616 | 8mer-1a | 44733590 | 44733616 | 148 | -22.57 |
| ADediting_478624 | chr15_44733611_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-372-5p | chr15 | 44733605 | 44733611 | 7mer-m8 | 44733590 | 44733612 | 145 | -13.38 |
| ADediting_478627 | chr15_44733635_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-324-3p | chr15 | 44733629 | 44733635 | 7mer-m8 | 44733614 | 44733636 | 145 | -25.79 |
| ADediting_478627 | chr15_44733635_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4690-3p | chr15 | 44733633 | 44733640 | 8mer-1a | 44733621 | 44733640 | 157 | -26.71 |
| ADediting_478627 | chr15_44733635_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5685 | chr15 | 44733633 | 44733640 | 8mer-1a | 44733620 | 44733640 | 153 | -19.46 |
| ADediting_478628 | chr15_44733640_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4267 | chr15 | 44733634 | 44733640 | 7mer-m8 | 44733626 | 44733641 | 148 | -20.54 |
| ADediting_478628 | chr15_44733640_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7977 | chr15 | 44733636 | 44733642 | 7mer-m8 | 44733625 | 44733643 | 150 | -18.31 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1539226 | chr15_44733016_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-324-3p | chr15 | 44733014 | 44733020 | 7mer-m8 | 44732997 | 44733021 | 144 | -20.85 |
| ADediting_1539226 | chr15_44733016_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4252 | chr15 | 44733015 | 44733021 | 7mer-m8 | 44733002 | 44733022 | 149 | -23.05 |
| ADediting_1539228 | chr15_44733146_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3675-3p | chr15 | 44733145 | 44733151 | 7mer-m8 | 44733131 | 44733152 | 145 | -12.58 |
| ADediting_1539229 | chr15_44733175_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-2681-3p | chr15 | 44733170 | 44733176 | 7mer-m8 | 44733153 | 44733177 | 154 | -20.24 |
| ADediting_478587 | chr15_44732984_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-301a-5p | chr15 | 44732981 | 44732987 | 7mer-m8 | 44732967 | 44732988 | 148 | -14.22 |
| ADediting_478587 | chr15_44732984_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-301b-5p | chr15 | 44732981 | 44732987 | 7mer-m8 | 44732967 | 44732988 | 140 | -12.25 |
| ADediting_478587 | chr15_44732984_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-345-5p | chr15 | 44732979 | 44732986 | 8mer-1a | 44732965 | 44732986 | 140 | -13.09 |
| ADediting_478587 | chr15_44732984_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4522 | chr15 | 44732983 | 44732989 | 7mer-m8 | 44732970 | 44732990 | 148 | -12.83 |
| ADediting_478587 | chr15_44732984_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4714-5p | chr15 | 44732982 | 44732988 | 7mer-m8 | 44732968 | 44732989 | 147 | -12.58 |
| ADediting_478588 | chr15_44733078_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4478 | chr15 | 44733076 | 44733082 | 7mer-m8 | 44733068 | 44733083 | 149 | -25.05 |
| ADediting_478588 | chr15_44733078_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4649-3p | chr15 | 44733073 | 44733079 | 7mer-m8 | 44733060 | 44733080 | 140 | -14.11 |
| ADediting_478588 | chr15_44733078_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7160-5p | chr15 | 44733074 | 44733080 | 7mer-m8 | 44733062 | 44733081 | 149 | -18.69 |
| ADediting_478589 | chr15_44733087_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-12126 | chr15 | 44733083 | 44733090 | 8mer-1a | 44733067 | 44733090 | 147 | -13.23 |
| ADediting_478589 | chr15_44733087_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-887-5p | chr15 | 44733081 | 44733087 | 7mer-m8 | 44733069 | 44733088 | 143 | -19.73 |
| ADediting_478590 | chr15_44733090_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5690 | chr15 | 44733088 | 44733094 | 7mer-m8 | 44733075 | 44733095 | 145 | -16.74 |
| ADediting_478592 | chr15_44733106_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-550a-3-5p | chr15 | 44733101 | 44733107 | 7mer-m8 | 44733089 | 44733108 | 143 | -16.67 |
| ADediting_478592 | chr15_44733106_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-550a-5p | chr15 | 44733101 | 44733107 | 7mer-m8 | 44733086 | 44733108 | 143 | -18.92 |
| ADediting_478592 | chr15_44733106_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6741-5p | chr15 | 44733104 | 44733110 | 7mer-m8 | 44733090 | 44733111 | 154 | -27.31 |
| ADediting_478592 | chr15_44733106_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6748-5p | chr15 | 44733105 | 44733111 | 7mer-m8 | 44733089 | 44733112 | 142 | -19.53 |
| ADediting_478596 | chr15_44733221_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7109-5p | chr15 | 44733215 | 44733222 | 8mer-1a | 44733202 | 44733222 | 151 | -21.92 |
| ADediting_478598 | chr15_44733223_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-129-1-3p | chr15 | 44733222 | 44733228 | 7mer-m8 | 44733208 | 44733229 | 140 | -11.82 |
| ADediting_478598 | chr15_44733223_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-129-2-3p | chr15 | 44733222 | 44733228 | 7mer-m8 | 44733208 | 44733229 | 140 | -11.82 |
| ADediting_478600 | chr15_44733427_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6807-5p | chr15 | 44733421 | 44733427 | 7mer-m8 | 44733407 | 44733428 | 140 | -19.57 |
| ADediting_478601 | chr15_44733435_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-10399-5p | chr15 | 44733431 | 44733437 | 7mer-m8 | 44733417 | 44733438 | 144 | -10.39 |
| ADediting_478601 | chr15_44733435_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6504-3p | chr15 | 44733431 | 44733437 | 7mer-m8 | 44733417 | 44733438 | 148 | -14.48 |
| ADediting_478601 | chr15_44733435_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7151-3p | chr15 | 44733429 | 44733436 | 8mer-1a | 44733416 | 44733436 | 144 | -16.51 |
| ADediting_478602 | chr15_44733436_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-10399-5p | chr15 | 44733431 | 44733437 | 7mer-m8 | 44733417 | 44733438 | 144 | -10.39 |
| ADediting_478602 | chr15_44733436_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5089-5p | chr15 | 44733435 | 44733441 | 7mer-m8 | 44733420 | 44733442 | 148 | -14.13 |
| ADediting_478602 | chr15_44733436_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6504-3p | chr15 | 44733431 | 44733437 | 7mer-m8 | 44733417 | 44733438 | 148 | -14.48 |
| ADediting_478603 | chr15_44733441_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5089-5p | chr15 | 44733435 | 44733441 | 7mer-m8 | 44733420 | 44733442 | 148 | -14.13 |
| ADediting_478603 | chr15_44733441_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-512-3p | chr15 | 44733440 | 44733446 | 7mer-m8 | 44733426 | 44733447 | 149 | -15.51 |
| ADediting_478603 | chr15_44733441_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6506-5p | chr15 | 44733436 | 44733442 | 7mer-m8 | 44733421 | 44733443 | 144 | -13.78 |
| ADediting_478604 | chr15_44733452_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-150-5p | chr15 | 44733447 | 44733453 | 7mer-m8 | 44733433 | 44733454 | 140 | -15.8 |
| ADediting_478604 | chr15_44733452_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6778-3p | chr15 | 44733449 | 44733455 | 7mer-m8 | 44733436 | 44733456 | 143 | -14.47 |
| ADediting_478606 | chr15_44733495_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3663-5p | chr15 | 44733490 | 44733496 | 7mer-m8 | 44733478 | 44733497 | 144 | -20.26 |
| ADediting_478606 | chr15_44733495_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6131 | chr15 | 44733491 | 44733497 | 7mer-m8 | 44733480 | 44733498 | 140 | -16.72 |
| ADediting_478606 | chr15_44733495_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6843-3p | chr15 | 44733489 | 44733495 | 7mer-m8 | 44733477 | 44733496 | 152 | -20.48 |
| ADediting_478606 | chr15_44733495_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6848-3p | chr15 | 44733489 | 44733495 | 7mer-m8 | 44733479 | 44733496 | 142 | -15.32 |
| ADediting_478607 | chr15_44733504_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4435 | chr15 | 44733498 | 44733505 | 8mer-1a | 44733484 | 44733505 | 149 | -18.63 |
| ADediting_478607 | chr15_44733504_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4781-3p | chr15 | 44733502 | 44733508 | 7mer-m8 | 44733491 | 44733509 | 144 | -13.86 |
| ADediting_478608 | chr15_44733505_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4716-5p | chr15 | 44733504 | 44733510 | 7mer-m8 | 44733490 | 44733511 | 140 | -10.69 |
| ADediting_478608 | chr15_44733505_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4781-3p | chr15 | 44733502 | 44733508 | 7mer-m8 | 44733491 | 44733509 | 144 | -13.86 |
| ADediting_478609 | chr15_44733512_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19a-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733496 | 44733517 | 152 | -12.09 |
| ADediting_478609 | chr15_44733512_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19b-1-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733494 | 44733517 | 155 | -15.31 |
| ADediting_478609 | chr15_44733512_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19b-2-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733495 | 44733517 | 155 | -12.76 |
| ADediting_478609 | chr15_44733512_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4659a-5p | chr15 | 44733506 | 44733513 | 8mer-1a | 44733492 | 44733513 | 145 | -13.59 |
| ADediting_478609 | chr15_44733512_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4659b-5p | chr15 | 44733506 | 44733513 | 8mer-1a | 44733495 | 44733513 | 145 | -13.85 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19a-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733496 | 44733517 | 152 | -12.09 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19b-1-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733494 | 44733517 | 155 | -15.31 |
| ADediting_478610 | chr15_44733513_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19b-2-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733495 | 44733517 | 155 | -12.76 |
| ADediting_478611 | chr15_44733515_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-193b-5p | chr15 | 44733513 | 44733519 | 7mer-m8 | 44733499 | 44733520 | 150 | -23.44 |
| ADediting_478611 | chr15_44733515_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19a-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733496 | 44733517 | 152 | -12.09 |
| ADediting_478611 | chr15_44733515_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19b-1-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733494 | 44733517 | 155 | -15.31 |
| ADediting_478611 | chr15_44733515_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-19b-2-5p | chr15 | 44733510 | 44733516 | 7mer-m8 | 44733495 | 44733517 | 155 | -12.76 |
| ADediting_478612 | chr15_44733526_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6832-5p | chr15 | 44733521 | 44733527 | 7mer-m8 | 44733506 | 44733528 | 142 | -16.66 |
| ADediting_478615 | chr15_44733539_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4735-5p | chr15 | 44733538 | 44733544 | 7mer-m8 | 44733524 | 44733545 | 140 | -5.19 |
| ADediting_478616 | chr15_44733543_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4735-5p | chr15 | 44733538 | 44733544 | 7mer-m8 | 44733524 | 44733545 | 140 | -5.19 |
| ADediting_478617 | chr15_44733569_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-10399-5p | chr15 | 44733565 | 44733571 | 7mer-m8 | 44733551 | 44733572 | 148 | -10.28 |
| ADediting_478617 | chr15_44733569_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6504-3p | chr15 | 44733565 | 44733571 | 7mer-m8 | 44733548 | 44733572 | 144 | -14.34 |
| ADediting_478617 | chr15_44733569_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7151-3p | chr15 | 44733563 | 44733570 | 8mer-1a | 44733549 | 44733570 | 143 | -14.31 |
| ADediting_478618 | chr15_44733570_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-10399-5p | chr15 | 44733565 | 44733571 | 7mer-m8 | 44733551 | 44733572 | 148 | -10.28 |
| ADediting_478618 | chr15_44733570_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5089-5p | chr15 | 44733569 | 44733575 | 7mer-m8 | 44733556 | 44733576 | 148 | -16.53 |
| ADediting_478618 | chr15_44733570_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6504-3p | chr15 | 44733565 | 44733571 | 7mer-m8 | 44733548 | 44733572 | 144 | -14.34 |
| ADediting_478619 | chr15_44733575_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5089-5p | chr15 | 44733569 | 44733575 | 7mer-m8 | 44733556 | 44733576 | 148 | -16.53 |
| ADediting_478619 | chr15_44733575_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6506-5p | chr15 | 44733570 | 44733576 | 7mer-m8 | 44733555 | 44733577 | 144 | -14.51 |
| ADediting_478620 | chr15_44733579_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-562 | chr15 | 44733576 | 44733582 | 7mer-m8 | 44733564 | 44733583 | 150 | -12.74 |
| ADediting_478620 | chr15_44733579_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-5697 | chr15 | 44733577 | 44733583 | 7mer-m8 | 44733562 | 44733584 | 149 | -18.32 |
| ADediting_478621 | chr15_44733596_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3667-3p | chr15 | 44733592 | 44733599 | 8mer-1a | 44733575 | 44733599 | 148 | -19.18 |
| ADediting_478621 | chr15_44733596_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-670-3p | chr15 | 44733590 | 44733596 | 7mer-m8 | 44733577 | 44733597 | 145 | -18.75 |
| ADediting_478623 | chr15_44733610_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-607 | chr15 | 44733605 | 44733611 | 7mer-m8 | 44733592 | 44733612 | 140 | -9.39 |
| ADediting_478624 | chr15_44733611_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-607 | chr15 | 44733605 | 44733611 | 7mer-m8 | 44733592 | 44733612 | 140 | -9.39 |
| ADediting_478625 | chr15_44733616_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-12119 | chr15 | 44733612 | 44733618 | 7mer-m8 | 44733596 | 44733619 | 147 | -18.76 |
| ADediting_478625 | chr15_44733616_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3921 | chr15 | 44733613 | 44733619 | 7mer-m8 | 44733598 | 44733620 | 153 | -16.58 |
| ADediting_478625 | chr15_44733616_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-4653-5p | chr15 | 44733613 | 44733619 | 7mer-m8 | 44733595 | 44733620 | 142 | -15.98 |
| ADediting_478625 | chr15_44733616_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-7162-3p | chr15 | 44733611 | 44733618 | 8mer-1a | 44733600 | 44733618 | 144 | -14.57 |
| ADediting_478630 | chr15_44733672_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-3664-5p | chr15 | 44733670 | 44733677 | 8mer-1a | 44733655 | 44733677 | 151 | -19.7 |
| ADediting_478630 | chr15_44733672_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-6773-3p | chr15 | 44733667 | 44733674 | 8mer-1a | 44733653 | 44733674 | 142 | -16.34 |
| ADediting_478631 | chr15_44733678_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-200c-5p | chr15 | 44733675 | 44733681 | 7mer-m8 | 44733660 | 44733682 | 145 | -13.42 |
| ADediting_478631 | chr15_44733678_+ | ENSG00000185880.13 | ENST00000560141.2 | TRIM69-207 | hsa-miR-550b-3p | chr15 | 44733673 | 44733680 | 8mer-1a | 44733661 | 44733680 | 153 | -19.54 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
| Differentially expressed lncRNA-miRNA network |
 |
Top |
The effects of the RNA editing to the stability of the RNA structures for TRIM69 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000560141.2 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_478587 | ENST00000560141.2 | chr15_44732984_+ | 2174 | -1230.00 | -1223.80 | -1250.80 |
| ADediting_1539226 | ENST00000560141.2 | chr15_44733016_+ | 2206 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478588 | ENST00000560141.2 | chr15_44733078_+ | 2268 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478589 | ENST00000560141.2 | chr15_44733087_+ | 2277 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478590 | ENST00000560141.2 | chr15_44733090_+ | 2280 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478591 | ENST00000560141.2 | chr15_44733100_+ | 2290 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478592 | ENST00000560141.2 | chr15_44733106_+ | 2296 | -1227.20 | -1223.80 | -1250.80 |
| ADediting_478593 | ENST00000560141.2 | chr15_44733113_+ | 2303 | -1223.40 | -1223.80 | -1250.80 |
| ADediting_1539227 | ENST00000560141.2 | chr15_44733137_+ | 2327 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_1539228 | ENST00000560141.2 | chr15_44733146_+ | 2336 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478594 | ENST00000560141.2 | chr15_44733160_+ | 2350 | -1227.40 | -1223.80 | -1250.80 |
| ADediting_478595 | ENST00000560141.2 | chr15_44733168_+ | 2358 | -1230.40 | -1223.80 | -1250.80 |
| ADediting_1539229 | ENST00000560141.2 | chr15_44733175_+ | 2365 | -1226.40 | -1223.80 | -1250.80 |
| ADediting_478596 | ENST00000560141.2 | chr15_44733221_+ | 2411 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478597 | ENST00000560141.2 | chr15_44733222_+ | 2412 | -1223.90 | -1223.80 | -1250.80 |
| ADediting_478598 | ENST00000560141.2 | chr15_44733223_+ | 2413 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478599 | ENST00000560141.2 | chr15_44733235_+ | 2425 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478600 | ENST00000560141.2 | chr15_44733427_+ | 2617 | -1223.40 | -1223.80 | -1250.80 |
| ADediting_478601 | ENST00000560141.2 | chr15_44733435_+ | 2625 | -1223.90 | -1223.80 | -1250.80 |
| ADediting_478602 | ENST00000560141.2 | chr15_44733436_+ | 2626 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478603 | ENST00000560141.2 | chr15_44733441_+ | 2631 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478604 | ENST00000560141.2 | chr15_44733452_+ | 2642 | -1230.70 | -1223.80 | -1250.80 |
| ADediting_478605 | ENST00000560141.2 | chr15_44733481_+ | 2671 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478606 | ENST00000560141.2 | chr15_44733495_+ | 2685 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478607 | ENST00000560141.2 | chr15_44733504_+ | 2694 | -1224.20 | -1223.80 | -1250.80 |
| ADediting_478608 | ENST00000560141.2 | chr15_44733505_+ | 2695 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478609 | ENST00000560141.2 | chr15_44733512_+ | 2702 | -1228.00 | -1223.80 | -1250.80 |
| ADediting_478610 | ENST00000560141.2 | chr15_44733513_+ | 2703 | -1223.70 | -1223.80 | -1250.80 |
| ADediting_478611 | ENST00000560141.2 | chr15_44733515_+ | 2705 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478612 | ENST00000560141.2 | chr15_44733526_+ | 2716 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478613 | ENST00000560141.2 | chr15_44733529_+ | 2719 | -1223.90 | -1223.80 | -1250.80 |
| ADediting_478614 | ENST00000560141.2 | chr15_44733530_+ | 2720 | -1223.90 | -1223.80 | -1250.80 |
| ADediting_1539230 | ENST00000560141.2 | chr15_44733538_+ | 2728 | -1224.20 | -1223.80 | -1250.80 |
| ADediting_478615 | ENST00000560141.2 | chr15_44733539_+ | 2729 | -1224.20 | -1223.80 | -1250.80 |
| ADediting_478616 | ENST00000560141.2 | chr15_44733543_+ | 2733 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478617 | ENST00000560141.2 | chr15_44733569_+ | 2759 | -1223.50 | -1223.80 | -1250.80 |
| ADediting_478618 | ENST00000560141.2 | chr15_44733570_+ | 2760 | -1230.00 | -1223.80 | -1250.80 |
| ADediting_478619 | ENST00000560141.2 | chr15_44733575_+ | 2765 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478620 | ENST00000560141.2 | chr15_44733579_+ | 2769 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478621 | ENST00000560141.2 | chr15_44733596_+ | 2786 | -1224.00 | -1223.80 | -1250.80 |
| ADediting_478622 | ENST00000560141.2 | chr15_44733605_+ | 2795 | -1226.60 | -1223.80 | -1250.80 |
| ADediting_478623 | ENST00000560141.2 | chr15_44733610_+ | 2800 | -1223.30 | -1223.80 | -1250.80 |
| ADediting_478624 | ENST00000560141.2 | chr15_44733611_+ | 2801 | -1223.80 | -1223.80 | -1250.80 |
| ADediting_478625 | ENST00000560141.2 | chr15_44733616_+ | 2806 | -1225.20 | -1223.80 | -1250.80 |
| ADediting_478626 | ENST00000560141.2 | chr15_44733622_+ | 2812 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478627 | ENST00000560141.2 | chr15_44733635_+ | 2825 | -1222.90 | -1223.80 | -1250.80 |
| ADediting_478628 | ENST00000560141.2 | chr15_44733640_+ | 2830 | -1222.90 | -1223.80 | -1250.80 |
| ADediting_478629 | ENST00000560141.2 | chr15_44733642_+ | 2832 | -1223.20 | -1223.80 | -1250.80 |
| ADediting_478630 | ENST00000560141.2 | chr15_44733672_+ | 2862 | -1223.10 | -1223.80 | -1250.80 |
| ADediting_478631 | ENST00000560141.2 | chr15_44733678_+ | 2868 | -1223.50 | -1223.80 | -1250.80 |
Top |
Relation with ADAR for TRIM69 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_478595 | chr15_44733168_+ | 0.00212302772458342 | 0.173875267556027 | 0.160186943961094 | 0.0799622564310578 | 2.59028557487527e-18 | 0.468432245671762 |
| AC | ADediting_478597 | chr15_44733222_+ | 2.95545463928425e-07 | 0.317382861042902 | 0.000107497753124152 | 0.242500015617675 | 0.584782396226099 | 0.0347217496941644 |
| CER | ADediting_478601 | chr15_44733435_+ | 0.000356959228890754 | 0.287709327234486 | 7.52655148237349e-06 | 0.35653847900612 | 0.15647919044802 | 0.116278480391917 |
| CER | ADediting_478606 | chr15_44733495_+ | 0.0325519691447627 | 0.174648876906646 | 4.80057436721824e-05 | 0.325551841213746 | 0.947048986265688 | 0.00546830681572787 |
| DLPFC | ADediting_478617 | chr15_44733569_+ | 1.4275072507159e-09 | 0.335113740687158 | 6.22688604886214e-12 | 0.377427226722951 | 0.0141190850114738 | 0.139272933627843 |
| DLPFC | ADediting_478618 | chr15_44733570_+ | 3.47575646267204e-10 | 0.346730753689531 | 8.64480052963221e-14 | 0.406877527828448 | 0.00163567395736644 | 0.178164300741987 |
| TCX | ADediting_478620 | chr15_44733579_+ | 0.293144741872885 | 0.0863961664443202 | 7.38590895285118e-05 | 0.317844357007613 | 0.0535853655197739 | -0.157928658712676 |
| TCX | ADediting_478621 | chr15_44733596_+ | 0.339833539286198 | 0.0784703135030881 | 0.000164075736570902 | 0.302985527554285 | 0.310372544060882 | -0.0833819200818339 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.76363474723231e-18 | 0.470481901077453 | 2.85422514788677e-06 | 0.262256725932364 | 7.60079817962452e-27 | 0.558706352877347 |
| AC | 4.27538943626837e-80 | 0.874999408466642 | 1.49566449298728e-48 | 0.761216487334624 | 1.65023838420247e-14 | 0.460224268516423 |
| PCC | 2.77911584053226e-21 | 0.615305593674081 | 3.24353286920092e-22 | 0.626461503309199 | 0.0230821807178069 | 0.1643605794276 |
| CER | 1.16318144566787e-24 | 0.713807541692421 | 1.71890269768912e-24 | 0.711998868315248 | 0.0104712280014653 | 0.208454743608498 |
| TCX | 1.89448900878807e-26 | 0.732060001486715 | 2.49590244803005e-14 | 0.570552007742123 | 0.808117126715159 | 0.0199943707173165 |
| FP | 3.93527669916414e-22 | 0.642797358184326 | 2.01512927641329e-24 | 0.668644561772832 | 0.824032256537842 | 0.0167837928822772 |
| IFG | 1.6352878991711e-05 | 0.749220901992959 | 1.17550688600757e-05 | 0.757231849537317 | 0.81237324962329 | 0.0500034571710741 |
| PG | 1.59414057376917e-53 | 0.851686839632837 | 1.33014702456318e-29 | 0.707972122035257 | 0.579902503834466 | -0.0408449843156239 |
| STG | 5.68930689219043e-17 | 0.759361665924114 | 3.20227337899974e-10 | 0.61997742322718 | 0.54444967154668 | -0.067061038613294 |
Top |
Relation with AD stages for TRIM69 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 3.79971058824828e-05 | 0.385439695089926 |
| IFG | 0.0417145975284944 | -0.41015077879838 |
Top |
RelatedDrugs for TRIM69 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for TRIM69 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| TRIM69 | C0344315 | Depressed mood | 1 | PSYGENET |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|