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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for DNAJC21 |
 Gene summary |
| Gene information | Gene symbol | DNAJC21 | Gene ID | 134218 |
| Gene name | DnaJ heat shock protein family (Hsp40) member C21 | |
| Synonyms | BMFS3|DNAJA5|GS3|JJJ1 | |
| Cytomap | 5p13.2 | |
| Type of gene | protein-coding | |
| Description | dnaJ homolog subfamily C member 21DnaJ (Hsp40) homolog, subfamily C, member 21DnaJ homology subfamily A member 5JJJ1 DnaJ domain protein homologdnaJ homolog subfamily A member 5 | |
| Modification date | 20200313 | |
| UniProtAcc | Q5F1R6, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for DNAJC21 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1200047(34932235, +), ADediting_1200048(34932244, +), ADediting_1200049(34932256, +), ADediting_1200050(34932306, +), ADediting_1200051(34933349, +), ADediting_1200052(34933372, +), ADediting_1200053(34933384, +), ADediting_1200054(34933401, +), ADediting_1200055(34933417, +), ADediting_1200056(34933447, +), ADediting_1200057(34933453, +), ADediting_1200058(34933459, +), ADediting_1200059(34933460, +), ADediting_1200060(34933497, +), ADediting_1200061(34933511, +), ADediting_1200062(34933514, +), ADediting_1200063(34941221, +), ADediting_1200064(34941590, +), ADediting_1200065(34941666, +), ADediting_1200066(34941667, +), ADediting_1200067(34941776, +), ADediting_1200068(34941829, +), ADediting_1200069(34942849, +), ADediting_1200070(34942892, +), ADediting_1200071(34942904, +), ADediting_1200072(34942948, +), ADediting_1200073(34942961, +), ADediting_1200074(34943018, +), ADediting_1200075(34945133, +), ADediting_1200076(34945278, +), ADediting_1200077(34945330, +), ADediting_1200078(34945352, +), ADediting_1200079(34948589, +), ADediting_1200080(34948664, +), ADediting_1200081(34948758, +), ADediting_1200082(34948820, +), ADediting_1200083(34950984, +), ADediting_1200084(34951581, +), ADediting_1200085(34951631, +), ADediting_1200086(34951748, +), ADediting_1200087(34951760, +), ADediting_1200088(34951781, +), ADediting_1200089(34951786, +), ADediting_1200090(34952858, +), ADediting_1200091(34952873, +), ADediting_1200092(34952877, +), ADediting_1200093(34952887, +), ADediting_1200094(34952893, +), ADediting_1200095(34952895, +), ADediting_1200096(34952913, +), ADediting_1200097(34952918, +), ADediting_1200098(34952970, +), ADediting_1200099(34952971, +), ADediting_1200100(34952987, +), ADediting_1200101(34952992, +), ADediting_1200102(34952997, +), ADediting_1200103(34953000, +), ADediting_1200104(34953003, +), ADediting_1200105(34953008, +), ADediting_1200106(34953029, +), ADediting_1200107(34953030, +), ADediting_1200108(34953039, +), ADediting_1200109(34953056, +), ADediting_1200110(34953059, +), ADediting_1200111(34953060, +), ADediting_1200112(34953071, +), ADediting_1200113(34953082, +), ADediting_1200114(34953091, +), ADediting_1200115(34953099, +), ADediting_1200116(34953100, +), ADediting_1200117(34953306, +), ADediting_1200118(34953310, +), ADediting_1200119(34953313, +), ADediting_1200120(34953325, +), ADediting_1200121(34953336, +), ADediting_1200122(34953341, +), ADediting_1200123(34953348, +), ADediting_1200124(34953361, +), ADediting_1200125(34953387, +), ADediting_1200126(34953391, +), ADediting_1200127(34953400, +), ADediting_1200128(34953426, +), ADediting_1200129(34953434, +), ADediting_1200130(34953442, +), ADediting_1200131(34953443, +), ADediting_1200132(34953445, +), ADediting_1200133(34953460, +), ADediting_1200134(34953463, +), ADediting_1200135(34953473, +), ADediting_1200136(34953524, +), ADediting_1200137(34953525, +), ADediting_1200138(34953539, +), ADediting_1200139(34955798, +), ADediting_1200140(34955799, +), ADediting_1200141(34955959, +), ADediting_1581409(34941323, +), ADediting_1581410(34941458, +), ADediting_1581411(34941475, +), ADediting_1581412(34948825, +), ADediting_1581413(34951608, +), ADediting_1581414(34951711, +), ADediting_1581415(34951723, +), ADediting_1581416(34952901, +), ADediting_1581417(34952904, +), ADediting_1581418(34952912, +), ADediting_1581419(34952917, +), ADediting_1581420(34952931, +), ADediting_1581421(34952934, +), ADediting_1581422(34952939, +), ADediting_1581423(34952948, +), ADediting_1581424(34952950, +), ADediting_1581425(34952962, +), ADediting_1581426(34952973, +), ADediting_1581427(34952994, +), ADediting_1581428(34952999, +), ADediting_1581429(34953035, +), ADediting_1581430(34953053, +), ADediting_1581431(34953070, +), ADediting_1581432(34953102, +), ADediting_1581433(34953110, +), ADediting_1581434(34953326, +), ADediting_1581435(34953413, +), ADediting_1581436(34953416, +), ADediting_1581437(34953422, +), ADediting_1581438(34953472, +), ADediting_1581439(34953502, +), ADediting_1581440(34953523, +), ADediting_1656690(34941685, +), ADediting_1656691(34952984, +), |
Top |
RNA editing positional annotations for DNAJC21 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1200047 | chr5_34932235_+ | intronic |
| ADediting_1200048 | chr5_34932244_+ | intronic |
| ADediting_1200049 | chr5_34932256_+ | intronic |
| ADediting_1200050 | chr5_34932306_+ | intronic |
| ADediting_1200051 | chr5_34933349_+ | intronic |
| ADediting_1200052 | chr5_34933372_+ | intronic |
| ADediting_1200053 | chr5_34933384_+ | intronic |
| ADediting_1200054 | chr5_34933401_+ | intronic |
| ADediting_1200055 | chr5_34933417_+ | intronic |
| ADediting_1200056 | chr5_34933447_+ | intronic |
| ADediting_1200057 | chr5_34933453_+ | intronic |
| ADediting_1200058 | chr5_34933459_+ | intronic |
| ADediting_1200059 | chr5_34933460_+ | intronic |
| ADediting_1200060 | chr5_34933497_+ | intronic |
| ADediting_1200061 | chr5_34933511_+ | intronic |
| ADediting_1200062 | chr5_34933514_+ | intronic |
| ADediting_1200063 | chr5_34941221_+ | intronic |
| ADediting_1200064 | chr5_34941590_+ | intronic |
| ADediting_1200065 | chr5_34941666_+ | intronic |
| ADediting_1200066 | chr5_34941667_+ | intronic |
| ADediting_1200067 | chr5_34941776_+ | intronic |
| ADediting_1200068 | chr5_34941829_+ | intronic |
| ADediting_1200069 | chr5_34942849_+ | intronic |
| ADediting_1200070 | chr5_34942892_+ | intronic |
| ADediting_1200071 | chr5_34942904_+ | intronic |
| ADediting_1200072 | chr5_34942948_+ | intronic |
| ADediting_1200073 | chr5_34942961_+ | intronic |
| ADediting_1200074 | chr5_34943018_+ | intronic |
| ADediting_1200075 | chr5_34945133_+ | intronic |
| ADediting_1200076 | chr5_34945278_+ | intronic |
| ADediting_1200077 | chr5_34945330_+ | intronic |
| ADediting_1200078 | chr5_34945352_+ | intronic |
| ADediting_1200079 | chr5_34948589_+ | intronic |
| ADediting_1200080 | chr5_34948664_+ | intronic |
| ADediting_1200081 | chr5_34948758_+ | intronic |
| ADediting_1200082 | chr5_34948820_+ | intronic |
| ADediting_1200083 | chr5_34950984_+ | intronic |
| ADediting_1200084 | chr5_34951581_+ | intronic |
| ADediting_1200085 | chr5_34951631_+ | intronic |
| ADediting_1200086 | chr5_34951748_+ | intronic |
| ADediting_1200087 | chr5_34951760_+ | intronic |
| ADediting_1200088 | chr5_34951781_+ | intronic |
| ADediting_1200089 | chr5_34951786_+ | intronic |
| ADediting_1200090 | chr5_34952858_+ | intronic |
| ADediting_1200091 | chr5_34952873_+ | intronic |
| ADediting_1200092 | chr5_34952877_+ | intronic |
| ADediting_1200093 | chr5_34952887_+ | intronic |
| ADediting_1200094 | chr5_34952893_+ | intronic |
| ADediting_1200095 | chr5_34952895_+ | intronic |
| ADediting_1200096 | chr5_34952913_+ | intronic |
| ADediting_1200097 | chr5_34952918_+ | intronic |
| ADediting_1200098 | chr5_34952970_+ | intronic |
| ADediting_1200099 | chr5_34952971_+ | intronic |
| ADediting_1200100 | chr5_34952987_+ | intronic |
| ADediting_1200101 | chr5_34952992_+ | intronic |
| ADediting_1200102 | chr5_34952997_+ | intronic |
| ADediting_1200103 | chr5_34953000_+ | intronic |
| ADediting_1200104 | chr5_34953003_+ | intronic |
| ADediting_1200105 | chr5_34953008_+ | intronic |
| ADediting_1200106 | chr5_34953029_+ | intronic |
| ADediting_1200107 | chr5_34953030_+ | intronic |
| ADediting_1200108 | chr5_34953039_+ | intronic |
| ADediting_1200109 | chr5_34953056_+ | intronic |
| ADediting_1200110 | chr5_34953059_+ | intronic |
| ADediting_1200111 | chr5_34953060_+ | intronic |
| ADediting_1200112 | chr5_34953071_+ | intronic |
| ADediting_1200113 | chr5_34953082_+ | intronic |
| ADediting_1200114 | chr5_34953091_+ | intronic |
| ADediting_1200115 | chr5_34953099_+ | intronic |
| ADediting_1200116 | chr5_34953100_+ | intronic |
| ADediting_1200117 | chr5_34953306_+ | intronic |
| ADediting_1200118 | chr5_34953310_+ | intronic |
| ADediting_1200119 | chr5_34953313_+ | intronic |
| ADediting_1200120 | chr5_34953325_+ | intronic |
| ADediting_1200121 | chr5_34953336_+ | intronic |
| ADediting_1200122 | chr5_34953341_+ | intronic |
| ADediting_1200123 | chr5_34953348_+ | intronic |
| ADediting_1200124 | chr5_34953361_+ | intronic |
| ADediting_1200125 | chr5_34953387_+ | intronic |
| ADediting_1200126 | chr5_34953391_+ | intronic |
| ADediting_1200127 | chr5_34953400_+ | intronic |
| ADediting_1200128 | chr5_34953426_+ | intronic |
| ADediting_1200129 | chr5_34953434_+ | intronic |
| ADediting_1200130 | chr5_34953442_+ | intronic |
| ADediting_1200131 | chr5_34953443_+ | intronic |
| ADediting_1200132 | chr5_34953445_+ | intronic |
| ADediting_1200133 | chr5_34953460_+ | intronic |
| ADediting_1200134 | chr5_34953463_+ | intronic |
| ADediting_1200135 | chr5_34953473_+ | intronic |
| ADediting_1200136 | chr5_34953524_+ | intronic |
| ADediting_1200137 | chr5_34953525_+ | intronic |
| ADediting_1200138 | chr5_34953539_+ | intronic |
| ADediting_1200139 | chr5_34955798_+ | UTR3 |
| ADediting_1200140 | chr5_34955799_+ | UTR3 |
| ADediting_1200141 | chr5_34955959_+ | UTR3 |
| ADediting_1581409 | chr5_34941323_+ | intronic |
| ADediting_1581410 | chr5_34941458_+ | intronic |
| ADediting_1581411 | chr5_34941475_+ | intronic |
| ADediting_1581412 | chr5_34948825_+ | intronic |
| ADediting_1581413 | chr5_34951608_+ | intronic |
| ADediting_1581414 | chr5_34951711_+ | intronic |
| ADediting_1581415 | chr5_34951723_+ | intronic |
| ADediting_1581416 | chr5_34952901_+ | intronic |
| ADediting_1581417 | chr5_34952904_+ | intronic |
| ADediting_1581418 | chr5_34952912_+ | intronic |
| ADediting_1581419 | chr5_34952917_+ | intronic |
| ADediting_1581420 | chr5_34952931_+ | intronic |
| ADediting_1581421 | chr5_34952934_+ | intronic |
| ADediting_1581422 | chr5_34952939_+ | intronic |
| ADediting_1581423 | chr5_34952948_+ | intronic |
| ADediting_1581424 | chr5_34952950_+ | intronic |
| ADediting_1581425 | chr5_34952962_+ | intronic |
| ADediting_1581426 | chr5_34952973_+ | intronic |
| ADediting_1581427 | chr5_34952994_+ | intronic |
| ADediting_1581428 | chr5_34952999_+ | intronic |
| ADediting_1581429 | chr5_34953035_+ | intronic |
| ADediting_1581430 | chr5_34953053_+ | intronic |
| ADediting_1581431 | chr5_34953070_+ | intronic |
| ADediting_1581432 | chr5_34953102_+ | intronic |
| ADediting_1581433 | chr5_34953110_+ | intronic |
| ADediting_1581434 | chr5_34953326_+ | intronic |
| ADediting_1581435 | chr5_34953413_+ | intronic |
| ADediting_1581436 | chr5_34953416_+ | intronic |
| ADediting_1581437 | chr5_34953422_+ | intronic |
| ADediting_1581438 | chr5_34953472_+ | intronic |
| ADediting_1581439 | chr5_34953502_+ | intronic |
| ADediting_1581440 | chr5_34953523_+ | intronic |
| ADediting_1656690 | chr5_34941685_+ | intronic |
| ADediting_1656691 | chr5_34952984_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1200047 | chr5_34932235_+ | SINE | Alu | Name=AluSc |
| ADediting_1200048 | chr5_34932244_+ | SINE | Alu | Name=AluSc |
| ADediting_1200049 | chr5_34932256_+ | SINE | Alu | Name=AluSc |
| ADediting_1200050 | chr5_34932306_+ | SINE | Alu | Name=AluSc |
| ADediting_1200051 | chr5_34933349_+ | SINE | Alu | Name=AluSz |
| ADediting_1200052 | chr5_34933372_+ | SINE | Alu | Name=AluSz |
| ADediting_1200053 | chr5_34933384_+ | SINE | Alu | Name=AluSz |
| ADediting_1200054 | chr5_34933401_+ | SINE | Alu | Name=AluSz |
| ADediting_1200055 | chr5_34933417_+ | SINE | Alu | Name=AluSz |
| ADediting_1200056 | chr5_34933447_+ | SINE | Alu | Name=AluSz |
| ADediting_1200057 | chr5_34933453_+ | SINE | Alu | Name=AluSz |
| ADediting_1200058 | chr5_34933459_+ | SINE | Alu | Name=AluSz |
| ADediting_1200059 | chr5_34933460_+ | SINE | Alu | Name=AluSz |
| ADediting_1200060 | chr5_34933497_+ | SINE | Alu | Name=AluSz |
| ADediting_1200061 | chr5_34933511_+ | SINE | Alu | Name=AluSz |
| ADediting_1200062 | chr5_34933514_+ | SINE | Alu | Name=AluSz |
| ADediting_1200063 | chr5_34941221_+ | SINE | Alu | Name=AluJb |
| ADediting_1200064 | chr5_34941590_+ | SINE | Alu | Name=AluSx |
| ADediting_1200065 | chr5_34941666_+ | SINE | Alu | Name=AluSx |
| ADediting_1200066 | chr5_34941667_+ | SINE | Alu | Name=AluSx |
| ADediting_1200067 | chr5_34941776_+ | SINE | Alu | Name=AluSx |
| ADediting_1200068 | chr5_34941829_+ | SINE | Alu | Name=AluSx |
| ADediting_1200069 | chr5_34942849_+ | SINE | Alu | Name=AluSp |
| ADediting_1200070 | chr5_34942892_+ | SINE | Alu | Name=AluSp |
| ADediting_1200071 | chr5_34942904_+ | SINE | Alu | Name=AluSp |
| ADediting_1200072 | chr5_34942948_+ | SINE | Alu | Name=AluSp |
| ADediting_1200073 | chr5_34942961_+ | SINE | Alu | Name=AluSp |
| ADediting_1200074 | chr5_34943018_+ | SINE | Alu | Name=AluSp |
| ADediting_1200075 | chr5_34945133_+ | SINE | Alu | Name=AluSx |
| ADediting_1200076 | chr5_34945278_+ | SINE | Alu | Name=AluSx |
| ADediting_1200077 | chr5_34945330_+ | SINE | Alu | Name=AluSx |
| ADediting_1200078 | chr5_34945352_+ | SINE | Alu | Name=AluSx |
| ADediting_1200079 | chr5_34948589_+ | SINE | Alu | Name=AluSg |
| ADediting_1200080 | chr5_34948664_+ | SINE | Alu | Name=AluSg |
| ADediting_1200081 | chr5_34948758_+ | SINE | Alu | Name=AluSg |
| ADediting_1200082 | chr5_34948820_+ | SINE | Alu | Name=AluSg |
| ADediting_1200084 | chr5_34951581_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1200085 | chr5_34951631_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1200086 | chr5_34951748_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1200087 | chr5_34951760_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1200088 | chr5_34951781_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1200089 | chr5_34951786_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1200091 | chr5_34952873_+ | SINE | Alu | Name=AluSg |
| ADediting_1200092 | chr5_34952877_+ | SINE | Alu | Name=AluSg |
| ADediting_1200093 | chr5_34952887_+ | SINE | Alu | Name=AluSg |
| ADediting_1200094 | chr5_34952893_+ | SINE | Alu | Name=AluSg |
| ADediting_1200095 | chr5_34952895_+ | SINE | Alu | Name=AluSg |
| ADediting_1200096 | chr5_34952913_+ | SINE | Alu | Name=AluSg |
| ADediting_1200097 | chr5_34952918_+ | SINE | Alu | Name=AluSg |
| ADediting_1200098 | chr5_34952970_+ | SINE | Alu | Name=AluSg |
| ADediting_1200099 | chr5_34952971_+ | SINE | Alu | Name=AluSg |
| ADediting_1200100 | chr5_34952987_+ | SINE | Alu | Name=AluSg |
| ADediting_1200101 | chr5_34952992_+ | SINE | Alu | Name=AluSg |
| ADediting_1200102 | chr5_34952997_+ | SINE | Alu | Name=AluSg |
| ADediting_1200103 | chr5_34953000_+ | SINE | Alu | Name=AluSg |
| ADediting_1200104 | chr5_34953003_+ | SINE | Alu | Name=AluSg |
| ADediting_1200105 | chr5_34953008_+ | SINE | Alu | Name=AluSg |
| ADediting_1200106 | chr5_34953029_+ | SINE | Alu | Name=AluSg |
| ADediting_1200107 | chr5_34953030_+ | SINE | Alu | Name=AluSg |
| ADediting_1200108 | chr5_34953039_+ | SINE | Alu | Name=AluSg |
| ADediting_1200109 | chr5_34953056_+ | SINE | Alu | Name=AluSg |
| ADediting_1200110 | chr5_34953059_+ | SINE | Alu | Name=AluSg |
| ADediting_1200111 | chr5_34953060_+ | SINE | Alu | Name=AluSg |
| ADediting_1200112 | chr5_34953071_+ | SINE | Alu | Name=AluSg |
| ADediting_1200113 | chr5_34953082_+ | SINE | Alu | Name=AluSg |
| ADediting_1200114 | chr5_34953091_+ | SINE | Alu | Name=AluSg |
| ADediting_1200115 | chr5_34953099_+ | SINE | Alu | Name=AluSg |
| ADediting_1200116 | chr5_34953100_+ | SINE | Alu | Name=AluSg |
| ADediting_1200117 | chr5_34953306_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200118 | chr5_34953310_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200119 | chr5_34953313_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200120 | chr5_34953325_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200121 | chr5_34953336_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200122 | chr5_34953341_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200123 | chr5_34953348_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200124 | chr5_34953361_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200125 | chr5_34953387_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200126 | chr5_34953391_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200127 | chr5_34953400_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200128 | chr5_34953426_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200129 | chr5_34953434_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200130 | chr5_34953442_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200131 | chr5_34953443_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200132 | chr5_34953445_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200133 | chr5_34953460_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200134 | chr5_34953463_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200135 | chr5_34953473_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200136 | chr5_34953524_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200137 | chr5_34953525_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200138 | chr5_34953539_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1200139 | chr5_34955798_+ | SINE | Alu | Name=AluYa5 |
| ADediting_1200140 | chr5_34955799_+ | SINE | Alu | Name=AluYa5 |
| ADediting_1200141 | chr5_34955959_+ | SINE | Alu | Name=AluYa5 |
| ADediting_1581409 | chr5_34941323_+ | SINE | Alu | Name=AluJb |
| ADediting_1581410 | chr5_34941458_+ | SINE | Alu | Name=AluJb |
| ADediting_1581411 | chr5_34941475_+ | SINE | Alu | Name=AluJb |
| ADediting_1581412 | chr5_34948825_+ | SINE | Alu | Name=AluSg |
| ADediting_1581413 | chr5_34951608_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1581414 | chr5_34951711_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1581415 | chr5_34951723_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1581416 | chr5_34952901_+ | SINE | Alu | Name=AluSg |
| ADediting_1581417 | chr5_34952904_+ | SINE | Alu | Name=AluSg |
| ADediting_1581418 | chr5_34952912_+ | SINE | Alu | Name=AluSg |
| ADediting_1581419 | chr5_34952917_+ | SINE | Alu | Name=AluSg |
| ADediting_1581420 | chr5_34952931_+ | SINE | Alu | Name=AluSg |
| ADediting_1581421 | chr5_34952934_+ | SINE | Alu | Name=AluSg |
| ADediting_1581422 | chr5_34952939_+ | SINE | Alu | Name=AluSg |
| ADediting_1581423 | chr5_34952948_+ | SINE | Alu | Name=AluSg |
| ADediting_1581424 | chr5_34952950_+ | SINE | Alu | Name=AluSg |
| ADediting_1581425 | chr5_34952962_+ | SINE | Alu | Name=AluSg |
| ADediting_1581426 | chr5_34952973_+ | SINE | Alu | Name=AluSg |
| ADediting_1581427 | chr5_34952994_+ | SINE | Alu | Name=AluSg |
| ADediting_1581428 | chr5_34952999_+ | SINE | Alu | Name=AluSg |
| ADediting_1581429 | chr5_34953035_+ | SINE | Alu | Name=AluSg |
| ADediting_1581430 | chr5_34953053_+ | SINE | Alu | Name=AluSg |
| ADediting_1581431 | chr5_34953070_+ | SINE | Alu | Name=AluSg |
| ADediting_1581432 | chr5_34953102_+ | SINE | Alu | Name=AluSg |
| ADediting_1581433 | chr5_34953110_+ | SINE | Alu | Name=AluSg |
| ADediting_1581434 | chr5_34953326_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1581435 | chr5_34953413_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1581436 | chr5_34953416_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1581437 | chr5_34953422_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1581438 | chr5_34953472_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1581439 | chr5_34953502_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1581440 | chr5_34953523_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1656690 | chr5_34941685_+ | SINE | Alu | Name=AluSx |
| ADediting_1656691 | chr5_34952984_+ | SINE | Alu | Name=AluSg |
Top |
RNA A-to-I editing events in the alternative splicing sites for DNAJC21 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for DNAJC21 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for DNAJC21 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for DNAJC21 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-513a-5p | chr5 | 34955792 | 34955798 | 7mer-m8 | 34955782 | 34955799 | 144 | -16.68 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-638 | chr5 | 34955797 | 34955803 | 7mer-1a | 34955779 | 34955803 | 159 | -35.56 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-513a-5p | chr5 | 34955792 | 34955798 | 7mer-m8 | 34955782 | 34955799 | 144 | -16.68 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-638 | chr5 | 34955797 | 34955803 | 7mer-1a | 34955779 | 34955803 | 159 | -35.56 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-513a-5p | chr5 | 34955792 | 34955798 | 7mer-m8 | 34955782 | 34955799 | 144 | -16.68 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-638 | chr5 | 34955797 | 34955803 | 7mer-1a | 34955779 | 34955803 | 159 | -35.56 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-8052 | chr5 | 34955797 | 34955803 | 7mer-1a | 34955785 | 34955803 | 140 | -24.15 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-8052 | chr5 | 34955797 | 34955803 | 7mer-1a | 34955785 | 34955803 | 140 | -24.15 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-8052 | chr5 | 34955797 | 34955803 | 7mer-1a | 34955785 | 34955803 | 140 | -24.15 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-10399-5p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 144 | -11.2 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-6504-3p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 148 | -14.35 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-7151-3p | chr5 | 34955791 | 34955798 | 8mer-1a | 34955778 | 34955798 | 144 | -16.51 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-10399-5p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 144 | -11.2 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-6504-3p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 148 | -14.35 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-7151-3p | chr5 | 34955791 | 34955798 | 8mer-1a | 34955778 | 34955798 | 144 | -16.51 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-10399-5p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 144 | -11.2 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-6504-3p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 148 | -14.35 |
| ADediting_1200139 | chr5_34955798_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-7151-3p | chr5 | 34955791 | 34955798 | 8mer-1a | 34955778 | 34955798 | 144 | -16.51 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-10399-5p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 144 | -11.2 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-5089-5p | chr5 | 34955797 | 34955803 | 7mer-m8 | 34955782 | 34955804 | 148 | -14.13 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-6504-3p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 148 | -14.35 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-10399-5p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 144 | -11.2 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-5089-5p | chr5 | 34955797 | 34955803 | 7mer-m8 | 34955782 | 34955804 | 148 | -14.13 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-6504-3p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 148 | -14.35 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-10399-5p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 144 | -11.2 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-5089-5p | chr5 | 34955797 | 34955803 | 7mer-m8 | 34955782 | 34955804 | 148 | -14.13 |
| ADediting_1200140 | chr5_34955799_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-6504-3p | chr5 | 34955793 | 34955799 | 7mer-m8 | 34955779 | 34955800 | 148 | -14.35 |
| ADediting_1200141 | chr5_34955959_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-1976 | chr5 | 34955956 | 34955963 | 8mer-1a | 34955943 | 34955963 | 149 | -21.37 |
| ADediting_1200141 | chr5_34955959_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-6747-3p | chr5 | 34955954 | 34955961 | 8mer-1a | 34955940 | 34955961 | 150 | -24.11 |
| ADediting_1200141 | chr5_34955959_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-1976 | chr5 | 34955956 | 34955963 | 8mer-1a | 34955943 | 34955963 | 149 | -21.37 |
| ADediting_1200141 | chr5_34955959_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-6747-3p | chr5 | 34955954 | 34955961 | 8mer-1a | 34955940 | 34955961 | 150 | -24.11 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1200084 | chr5_34951581_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-4793-3p | chr5 | 34951578 | 34951584 | 7mer-m8 | 34951563 | 34951585 | 149 | -19.36 |
| ADediting_1200084 | chr5_34951581_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-7703 | chr5 | 34951577 | 34951583 | 7mer-m8 | 34951562 | 34951584 | 162 | -25.89 |
| ADediting_1200086 | chr5_34951748_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-28-5p | chr5 | 34951747 | 34951753 | 7mer-m8 | 34951734 | 34951754 | 161 | -20.36 |
| ADediting_1200086 | chr5_34951748_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-3139 | chr5 | 34951747 | 34951753 | 7mer-m8 | 34951732 | 34951754 | 165 | -27.61 |
| ADediting_1200086 | chr5_34951748_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-3670 | chr5 | 34951745 | 34951751 | 7mer-m8 | 34951729 | 34951752 | 158 | -20.58 |
| ADediting_1200086 | chr5_34951748_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-708-5p | chr5 | 34951747 | 34951753 | 7mer-m8 | 34951732 | 34951754 | 157 | -19.75 |
| ADediting_1200088 | chr5_34951781_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-1972 | chr5 | 34951775 | 34951781 | 7mer-m8 | 34951761 | 34951782 | 148 | -21.6 |
| ADediting_1200088 | chr5_34951781_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-7150 | chr5 | 34951778 | 34951785 | 8mer-1a | 34951768 | 34951785 | 145 | -17.54 |
| ADediting_1200089 | chr5_34951786_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-6813-3p | chr5 | 34951782 | 34951788 | 7mer-m8 | 34951769 | 34951789 | 140 | -16.33 |
| ADediting_1581413 | chr5_34951608_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-17-3p | chr5 | 34951602 | 34951608 | 7mer-m8 | 34951588 | 34951609 | 150 | -18.77 |
| ADediting_1581413 | chr5_34951608_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-485-5p | chr5 | 34951606 | 34951612 | 7mer-m8 | 34951593 | 34951613 | 153 | -18.27 |
| ADediting_1581413 | chr5_34951608_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-6884-5p | chr5 | 34951606 | 34951612 | 7mer-m8 | 34951590 | 34951613 | 154 | -23.9 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1200083 | chr5_34950984_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-4635 | chr5 | 34950979 | 34950985 | 7mer-m8 | 34950965 | 34950986 | 142 | -14.5 |
| ADediting_1200085 | chr5_34951631_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-219b-3p | chr5 | 34951629 | 34951635 | 7mer-m8 | 34951616 | 34951636 | 153 | -18.56 |
| ADediting_1200085 | chr5_34951631_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-302f | chr5 | 34951628 | 34951634 | 7mer-m8 | 34951619 | 34951635 | 145 | -8.67 |
| ADediting_1200088 | chr5_34951781_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-5704 | chr5 | 34951775 | 34951781 | 7mer-m8 | 34951761 | 34951782 | 140 | -9.97 |
| ADediting_1200089 | chr5_34951786_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-9-5p | chr5 | 34951781 | 34951787 | 7mer-m8 | 34951766 | 34951788 | 143 | -12.6 |
| ADediting_1581413 | chr5_34951608_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-377-5p | chr5 | 34951606 | 34951612 | 7mer-m8 | 34951591 | 34951613 | 149 | -17.66 |
| ADediting_1581413 | chr5_34951608_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-6086 | chr5 | 34951606 | 34951612 | 7mer-m8 | 34951594 | 34951613 | 150 | -23.99 |
| ADediting_1581413 | chr5_34951608_+ | ENSG00000168724.17 | ENST00000512136.1 | DNAJC21-204 | hsa-miR-6516-5p | chr5 | 34951602 | 34951608 | 7mer-m8 | 34951587 | 34951609 | 148 | -17.04 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-589-3p | chr5 | 34956495 | 34956501 | 7mer-m8 | 34956479 | 34956502 | 157 | -14.44 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-589-3p | chr5 | 34956495 | 34956501 | 7mer-m8 | 34956479 | 34956502 | 157 | -14.44 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-589-5p | chr5 | 34957371 | 34957377 | 7mer-m8 | 34957359 | 34957378 | 153 | -20.23 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-589-5p | chr5 | 34957371 | 34957377 | 7mer-m8 | 34957359 | 34957378 | 153 | -20.23 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-337-3p | chr5 | 34956907 | 34956913 | 7mer-m8 | 34956893 | 34956914 | 161 | -17.23 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-337-3p | chr5 | 34956907 | 34956913 | 7mer-m8 | 34956893 | 34956914 | 161 | -17.23 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-641 | chr5 | 34955405 | 34955411 | 7mer-m8 | 34955389 | 34955412 | 143 | -11.15 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-641 | chr5 | 34955405 | 34955411 | 7mer-m8 | 34955389 | 34955412 | 143 | -11.15 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-641 | chr5 | 34955405 | 34955411 | 7mer-m8 | 34955389 | 34955412 | 143 | -11.15 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-4775 | chr5 | 34956744 | 34956751 | 8mer-1a | 34956728 | 34956751 | 148 | -12.94 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-4775 | chr5 | 34956744 | 34956751 | 8mer-1a | 34956728 | 34956751 | 148 | -12.94 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-337-3p | chr5 | 34957067 | 34957074 | 8mer-1a | 34957053 | 34957074 | 144 | -11.53 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-337-3p | chr5 | 34957067 | 34957074 | 8mer-1a | 34957053 | 34957074 | 144 | -11.53 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-641 | chr5 | 34957936 | 34957942 | 7mer-m8 | 34957920 | 34957943 | 150 | -11.73 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000642285.1 | DNAJC21-206 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000642675.1 | DNAJC21-207 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-641 | chr5 | 34957936 | 34957942 | 7mer-m8 | 34957920 | 34957943 | 150 | -11.73 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000382021.2 | DNAJC21-201 | hsa-miR-641 | chr5 | 34957936 | 34957942 | 7mer-m8 | 34957920 | 34957943 | 150 | -11.73 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000642285.1 | DNAJC21-206 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000642675.1 | DNAJC21-207 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000642851.1 | DNAJC21-208 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-641 | chr5 | 34954930 | 34954937 | 8mer-1a | 34954913 | 34954937 | 151 | -13.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000168724.17 | ENST00000648817.1 | DNAJC21-211 | hsa-miR-641 | chr5 | 34957936 | 34957942 | 7mer-m8 | 34957920 | 34957943 | 150 | -11.73 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for DNAJC21 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000648817.1 | protein_coding |  |  |
| ENST00000382021.2 | protein_coding |  |  |
| ENST00000642851.1 | protein_coding |  |  |
| ENST00000512136.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1200139 | ENST00000648817.1 | chr5_34955798_+ | 2941 | -1637.50 | -1635.10 | -1639.00 |
| ADediting_1200140 | ENST00000648817.1 | chr5_34955799_+ | 2942 | -1635.10 | -1635.10 | -1639.00 |
| ADediting_1200141 | ENST00000648817.1 | chr5_34955959_+ | 3102 | -1637.60 | -1635.10 | -1639.00 |
| ADediting_1200139 | ENST00000382021.2 | chr5_34955798_+ | 3042 | -1661.80 | -1659.40 | -1663.30 |
| ADediting_1200140 | ENST00000382021.2 | chr5_34955799_+ | 3043 | -1659.40 | -1659.40 | -1663.30 |
| ADediting_1200141 | ENST00000382021.2 | chr5_34955959_+ | 3203 | -1661.90 | -1659.40 | -1663.30 |
| ADediting_1200139 | ENST00000642851.1 | chr5_34955798_+ | 2719 | -696.90 | -696.90 | -698.30 |
| ADediting_1200140 | ENST00000642851.1 | chr5_34955799_+ | 2720 | -696.90 | -696.90 | -698.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1200083 | ENST00000512136.1 | chr5_34950984_+ | 757 | -774.20 | -767.70 | -792.10 |
| ADediting_1200084 | ENST00000512136.1 | chr5_34951581_+ | 1354 | -773.10 | -767.70 | -792.10 |
| ADediting_1581413 | ENST00000512136.1 | chr5_34951608_+ | 1381 | -767.70 | -767.70 | -792.10 |
| ADediting_1200085 | ENST00000512136.1 | chr5_34951631_+ | 1404 | -773.30 | -767.70 | -792.10 |
| ADediting_1581414 | ENST00000512136.1 | chr5_34951711_+ | 1484 | -767.40 | -767.70 | -792.10 |
| ADediting_1581415 | ENST00000512136.1 | chr5_34951723_+ | 1496 | -768.00 | -767.70 | -792.10 |
| ADediting_1200086 | ENST00000512136.1 | chr5_34951748_+ | 1521 | -770.80 | -767.70 | -792.10 |
| ADediting_1200087 | ENST00000512136.1 | chr5_34951760_+ | 1533 | -767.00 | -767.70 | -792.10 |
| ADediting_1200088 | ENST00000512136.1 | chr5_34951781_+ | 1554 | -767.70 | -767.70 | -792.10 |
| ADediting_1200089 | ENST00000512136.1 | chr5_34951786_+ | 1559 | -770.00 | -767.70 | -792.10 |
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Relation with ADAR for DNAJC21 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1200077 | chr5_34945330_+ | 0.00715121585152936 | 0.152487415333038 | 0.624796062615921 | 0.0278842383453916 | 6.22185408660493e-14 | 0.409025753603222 |
| DLPFC | ADediting_1200087 | chr5_34951760_+ | 0.0200232616505982 | 0.13205733369689 | 0.895055483243372 | -0.00752226639811602 | 5.56268347396249e-13 | 0.394416838765524 |
| CER | ADediting_1200087 | chr5_34951760_+ | 2.42287275963971e-06 | 0.374003640113001 | 1.36101973316471e-08 | 0.443100424493216 | 0.0134946283445218 | 0.20132511836079 |
| DLPFC | ADediting_1200094 | chr5_34952893_+ | 6.43600809987616e-06 | 0.253076955525967 | 0.00236811630432969 | 0.172049399418453 | 2.70099234709955e-08 | 0.30925011768666 |
| CER | ADediting_1200094 | chr5_34952893_+ | 1.24616381843834e-06 | 0.383794094514153 | 5.93436423329859e-07 | 0.39435714005247 | 0.0300285041420131 | 0.177234110401231 |
| CER | ADediting_1200096 | chr5_34952913_+ | 0.000127013947630469 | 0.307838099081544 | 8.29518201666123e-07 | 0.389634096614455 | 0.00374631133862867 | 0.235319019111055 |
| TCX | ADediting_1200096 | chr5_34952913_+ | 3.5331079583667e-05 | 0.33091227884179 | 0.00815048194137644 | 0.21528805671887 | 0.243750792139309 | 0.0957581447174501 |
| CER | ADediting_1200097 | chr5_34952918_+ | 0.00388604927993029 | 0.234411485369057 | 0.000113163116247556 | 0.309999286232282 | 0.794150652318994 | 0.021481649745163 |
| DLPFC | ADediting_1200098 | chr5_34952970_+ | 0.0200519089886939 | 0.132027137361399 | 0.689661182353668 | 0.0227686020400052 | 9.14091073077244e-12 | 0.374634119888651 |
| CER | ADediting_1200098 | chr5_34952970_+ | 8.59022726360814e-08 | 0.420273109574318 | 2.71557336144657e-09 | 0.461779334862693 | 0.243080954902979 | 0.0958936941061784 |
| STG | ADediting_1200098 | chr5_34952970_+ | 0.00306002652430473 | 0.31941725750802 | 0.384951516919406 | 0.0960142512832206 | 0.076774338312265 | 0.194159139304272 |
| CER | ADediting_1200099 | chr5_34952971_+ | 0.00169341688599427 | 0.254226062333828 | 9.20965055061777e-07 | 0.388144162166918 | 0.701289846266152 | 0.0315754987255913 |
| CER | ADediting_1200104 | chr5_34953003_+ | 0.000513250752715968 | 0.280268294131967 | 4.0862710701809e-05 | 0.328381330853839 | 0.0156258614735513 | 0.19709970850706 |
| CER | ADediting_1200106 | chr5_34953029_+ | 6.62826184756348e-07 | 0.39280577389286 | 4.4640865364804e-09 | 0.456137880114309 | 0.173319765817343 | 0.111761617972803 |
| CER | ADediting_1200107 | chr5_34953030_+ | 0.000288434794063698 | 0.291983743251713 | 6.53154629178964e-05 | 0.32006486170432 | 0.932553199653562 | 0.00696846247627216 |
| CER | ADediting_1200109 | chr5_34953056_+ | 0.000118190382354653 | 0.309187679180281 | 6.95235622230019e-07 | 0.392133604971067 | 0.170337717949673 | 0.112536890004208 |
| CER | ADediting_1200111 | chr5_34953060_+ | 0.0016347994968771 | 0.255033059331556 | 0.00015605208956504 | 0.303942474440642 | 0.714319096933298 | -0.0301341019076252 |
| CER | ADediting_1200112 | chr5_34953071_+ | 0.000876005705253925 | 0.268923376327359 | 7.91940159775283e-05 | 0.316576837429058 | 0.851354683876853 | 0.0154285040847157 |
| DLPFC | ADediting_1200113 | chr5_34953082_+ | 0.0012675074676989 | 0.182267998372087 | 0.245341775429879 | 0.066177289815564 | 8.13826053489897e-12 | 0.375482285329397 |
| CER | ADediting_1200113 | chr5_34953082_+ | 1.20711482966033e-05 | 0.348945194485943 | 1.10963673489824e-07 | 0.416963575970736 | 0.296872735888371 | 0.0857341840265584 |
| CER | ADediting_1200116 | chr5_34953100_+ | 2.63719490026914e-06 | 0.372732318611172 | 1.56823172747833e-11 | 0.514925763727165 | 0.198005527525208 | 0.105693424310793 |
| DLPFC | ADediting_1200119 | chr5_34953313_+ | 4.21766667727883e-10 | 0.345167852681263 | 4.46114511926292e-06 | 0.257257723979199 | 0.000601263220144625 | 0.193802356924717 |
| CER | ADediting_1200119 | chr5_34953313_+ | 0.00100017206500417 | 0.266033531229657 | 7.13324733451985e-07 | 0.391771321775818 | 0.0372232022436239 | 0.170281485467903 |
| CER | ADediting_1200120 | chr5_34953325_+ | 6.46707862789971e-06 | 0.358936363047443 | 1.1884516393621e-10 | 0.495116087465799 | 0.0674946544920242 | 0.149695396394862 |
| CER | ADediting_1200121 | chr5_34953336_+ | 0.000953479216092691 | 0.267079508654089 | 4.57441811731263e-06 | 0.364337461445011 | 0.0454599209634915 | 0.163596290867997 |
| DLPFC | ADediting_1200122 | chr5_34953341_+ | 3.34797492993717e-09 | 0.327862970184297 | 3.08167562333292e-05 | 0.234332185957639 | 0.00087685677252201 | 0.188050013001239 |
| CER | ADediting_1200122 | chr5_34953341_+ | 0.000215438549575941 | 0.297729004677189 | 3.75216448085796e-06 | 0.367384868070645 | 0.0960470377200099 | 0.136396924591187 |
| DLPFC | ADediting_1200123 | chr5_34953348_+ | 1.11011297226118e-09 | 0.337217132972506 | 7.44754801365237e-05 | 0.223058855338263 | 4.59154697616775e-07 | 0.281719084843146 |
| CER | ADediting_1200123 | chr5_34953348_+ | 0.00043420217641669 | 0.2837209275284 | 6.49566104606027e-06 | 0.358866934942096 | 0.0161085187280385 | 0.196213119164822 |
| CER | ADediting_1200125 | chr5_34953387_+ | 0.000393708963998277 | 0.285721530992059 | 1.25830137078372e-05 | 0.348268170391192 | 0.0274131166389533 | 0.180116494948563 |
| DLPFC | ADediting_1200126 | chr5_34953391_+ | 0.00611810367558399 | 0.155381088614137 | 0.611281281399512 | 0.028977395832212 | 2.45209539844105e-13 | 0.399963793779015 |
| CER | ADediting_1200126 | chr5_34953391_+ | 5.01544217889623e-07 | 0.396702306509461 | 1.70257336771366e-10 | 0.49146317140441 | 0.000376336752466073 | 0.286638782286713 |
| CER | ADediting_1200127 | chr5_34953400_+ | 2.72633075068502e-06 | 0.372232274296365 | 1.32978455157212e-08 | 0.443377618139595 | 0.000581495106500986 | 0.277662020665895 |
| CER | ADediting_1200129 | chr5_34953434_+ | 1.42209202322166e-06 | 0.381874635275302 | 6.68426636096386e-09 | 0.451479534186785 | 0.0768301677626775 | 0.144918097867841 |
| CER | ADediting_1200130 | chr5_34953442_+ | 0.00293080460894593 | 0.241318294730498 | 7.66965607905653e-05 | 0.317159922643181 | 0.207075091050053 | 0.103602452152071 |
| CER | ADediting_1200131 | chr5_34953443_+ | 9.48840422978134e-06 | 0.352839509708392 | 6.57450414246478e-07 | 0.392920288481311 | 0.089689150557132 | 0.139051962132702 |
| DLPFC | ADediting_1200133 | chr5_34953460_+ | 0.00258110773398347 | 0.17059751474815 | 0.569544586382051 | 0.0324237479466413 | 8.73296179140213e-23 | 0.519078263877135 |
| CER | ADediting_1200133 | chr5_34953460_+ | 2.72732857391828e-07 | 0.405046659813755 | 3.75266694467425e-10 | 0.483277650896271 | 0.115701358189269 | 0.128982951805891 |
| DLPFC | ADediting_1200134 | chr5_34953463_+ | 0.00470969539563628 | 0.160129840991685 | 0.153604031420256 | 0.0812375715697416 | 2.16823933386041e-08 | 0.311269961099294 |
| DLPFC | ADediting_1200135 | chr5_34953473_+ | 2.76345465051581e-05 | 0.23568660181956 | 0.0148945365673091 | 0.138189044600598 | 8.51367887898225e-10 | 0.339419806828974 |
| CER | ADediting_1200135 | chr5_34953473_+ | 8.57496750898745e-07 | 0.389162273724993 | 8.21166613513544e-09 | 0.449077578212947 | 0.0188278823213455 | 0.191610945301856 |
| CER | ADediting_1200137 | chr5_34953525_+ | 0.00450891326393149 | 0.230692542488022 | 0.000118147975013054 | 0.309194389629764 | 0.142928286773476 | 0.120185932425141 |
| CER | ADediting_1200138 | chr5_34953539_+ | 0.000400898894772881 | 0.285352816192162 | 9.03274794221734e-05 | 0.314170588063958 | 0.29125966778218 | 0.0867330296483492 |
| CER | ADediting_1581417 | chr5_34952904_+ | 8.93797138962743e-05 | 0.314364297185025 | 2.19348875872371e-08 | 0.437346782965996 | 0.126426499048835 | 0.125344858300434 |
| CER | ADediting_1581418 | chr5_34952912_+ | 0.00717463782374536 | 0.218691166660505 | 3.447213611374e-06 | 0.368679104740467 | 0.0206055927186288 | 0.188904950366534 |
| CER | ADediting_1581422 | chr5_34952939_+ | 1.87056009045916e-05 | 0.341724784030995 | 2.9443327304207e-08 | 0.43374373646239 | 0.0363318839090764 | 0.171077608292291 |
| CER | ADediting_1581426 | chr5_34952973_+ | 0.000189482648104264 | 0.300219240258107 | 1.75691294865487e-08 | 0.440035628595007 | 0.809139933177225 | 0.0198857121043205 |
| CER | ADediting_1581434 | chr5_34953326_+ | 0.013355405832626 | 0.201620992726078 | 7.34638241748239e-06 | 0.35692273325346 | 0.223992802612317 | 0.099871331972721 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.87017770649107e-21 | 0.500290073602817 | 2.00107857484555e-27 | 0.563956853097132 | 0.000171228769975951 | 0.211871808978265 |
| AC | 5.15616602465648e-55 | 0.791764291059439 | 1.14613430810203e-36 | 0.68993753777479 | 1.73713519780546e-15 | 0.475178312143486 |
| PCC | 1.80279008280216e-33 | 0.733091299475334 | 1.3531073630945e-40 | 0.781589841540381 | 0.0106649891637557 | 0.18438730209569 |
| CER | 1.14275196874275e-32 | 0.785628743171 | 1.92472368888087e-35 | 0.805448313782167 | 0.000321080840091655 | 0.289841925152525 |
| TCX | 3.8990893344865e-27 | 0.738692449061798 | 1.07312765385919e-05 | 0.350854818219833 | 5.78192008436615e-08 | 0.425322335250167 |
| FP | 1.10761710062974e-26 | 0.691834920442922 | 1.95222370092423e-12 | 0.495867724546154 | 2.57998230702862e-05 | 0.309769106811987 |
| IFG | 8.50608723736242e-08 | 0.848324524230167 | 3.73256865891723e-07 | 0.825741581112878 | 0.126298447796498 | 0.314054708516882 |
| PG | 9.20533694103984e-46 | 0.816479418194044 | 4.55720530552294e-23 | 0.642806306450742 | 0.692809111599637 | 0.0291565543745896 |
| STG | 6.3838381654536e-15 | 0.724904212717298 | 4.05328345487901e-12 | 0.667577963834345 | 0.273047858983102 | 0.120963842072144 |
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Relation with AD stages for DNAJC21 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1200087 | chr5_34951760_+ | 0.000408935252191917 | 0.334142006316863 |
| CER | ADediting_1200096 | chr5_34952913_+ | 6.52114992903045e-05 | 0.374514161783773 |
| CER | ADediting_1200098 | chr5_34952970_+ | 0.000797560854469524 | 0.317985616274967 |
| CER | ADediting_1200099 | chr5_34952971_+ | 0.000672469499830536 | 0.32219700723185 |
| CER | ADediting_1200104 | chr5_34953003_+ | 0.000108178072364224 | 0.363910332789845 |
| CER | ADediting_1200106 | chr5_34953029_+ | 0.000669741580118661 | 0.322296614155852 |
| CER | ADediting_1581417 | chr5_34952904_+ | 2.01349383287203e-05 | 0.397809772090593 |
| TCX | ADediting_1200123 | chr5_34953348_+ | 0.00128186688517781 | 0.308738090013365 |
| IFG | ADediting_1200095 | chr5_34952895_+ | 0.0114683904084976 | 0.49710219232641 |
| IFG | ADediting_1200126 | chr5_34953391_+ | 0.0354713369979928 | 0.422303326441651 |
| IFG | ADediting_1200135 | chr5_34953473_+ | 0.0349819754453209 | 0.423325854152686 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 1.84503131673843e-07 | 0.476615914408454 |
| TCX | 1.03248121519598e-07 | 0.489181003955779 |
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RelatedDrugs for DNAJC21 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DNAJC21 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| DNAJC21 | C0010828 | Cytopenia | 3 | GENOMICS_ENGLAND |
| DNAJC21 | C0158995 | Congenital anemia | 3 | GENOMICS_ENGLAND |
| DNAJC21 | C4310744 | BONE MARROW FAILURE SYNDROME 3 | 1 | UNIPROT |
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