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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for AASDH |
 Gene summary |
| Gene information | Gene symbol | AASDH | Gene ID | 132949 |
| Gene name | aminoadipate-semialdehyde dehydrogenase | |
| Synonyms | ACSF4|LYS2|NRPS1098|NRPS998 | |
| Cytomap | 4q12 | |
| Type of gene | protein-coding | |
| Description | beta-alanine-activating enzyme2-aminoadipic 6-semialdehyde dehydrogenaseacyl-CoA synthetase family member 4non-ribosomal peptide synthetase 1098non-ribosomal peptide synthetase 998 | |
| Modification date | 20200313 | |
| UniProtAcc | Q4L235, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for AASDH |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1140190(56339216, -), ADediting_1140191(56339239, -), ADediting_1140192(56339242, -), ADediting_1140193(56339259, -), ADediting_1140194(56339286, -), ADediting_1140195(56339314, -), ADediting_1140196(56339317, -), ADediting_1140197(56339322, -), ADediting_1140198(56339323, -), ADediting_1140199(56339324, -), ADediting_1140200(56339325, -), ADediting_1140201(56339326, -), ADediting_1140202(56339350, -), ADediting_1140203(56339363, -), ADediting_1140204(56339374, -), ADediting_1140205(56339417, -), ADediting_1140206(56339424, -), ADediting_1140207(56339488, -), ADediting_1140208(56339494, -), ADediting_1140209(56339505, -), ADediting_1140210(56339506, -), ADediting_1140211(56339558, -), ADediting_1140212(56339587, -), ADediting_1140213(56339588, -), ADediting_1140214(56339710, -), ADediting_1140215(56339912, -), ADediting_1140216(56339924, -), ADediting_1140217(56340053, -), ADediting_1140218(56340086, -), ADediting_1140219(56340107, -), ADediting_1140220(56340122, -), ADediting_1140221(56340123, -), ADediting_1140222(56340160, -), ADediting_1140223(56340167, -), ADediting_1140224(56341445, -), ADediting_1140225(56341460, -), ADediting_1140226(56341489, -), ADediting_1140227(56341490, -), ADediting_1140228(56341498, -), ADediting_1140229(56341504, -), ADediting_1140230(56341531, -), ADediting_1140231(56341539, -), ADediting_1140232(56341596, -), ADediting_1140233(56341604, -), ADediting_1140234(56341606, -), ADediting_1140235(56341619, -), ADediting_1140236(56341630, -), ADediting_1140237(56341668, -), ADediting_1140238(56341673, -), ADediting_1140239(56341674, -), ADediting_1140240(56341692, -), ADediting_1140241(56341864, -), ADediting_1140242(56341867, -), ADediting_1140243(56341877, -), ADediting_1140244(56341907, -), ADediting_1140245(56341915, -), ADediting_1140246(56342012, -), ADediting_1140247(56342025, -), ADediting_1140248(56342026, -), ADediting_1140249(56342029, -), ADediting_1140250(56342076, -), ADediting_1140251(56342102, -), ADediting_1140252(56345009, -), ADediting_1140253(56345038, -), ADediting_1140254(56345039, -), ADediting_1140255(56345106, -), ADediting_1140256(56346808, -), ADediting_1140257(56346838, -), ADediting_1140258(56346839, -), ADediting_1140259(56346840, -), ADediting_1140260(56346903, -), ADediting_1140261(56346908, -), ADediting_1140262(56346959, -), ADediting_1140263(56346981, -), ADediting_1140264(56347645, -), ADediting_1140265(56347657, -), ADediting_1140266(56347658, -), ADediting_1140267(56347667, -), ADediting_1140268(56347684, -), ADediting_1140269(56347685, -), ADediting_1140270(56347697, -), ADediting_1140271(56347698, -), ADediting_1140272(56347699, -), ADediting_1140273(56347710, -), ADediting_1140274(56347730, -), ADediting_1140275(56347744, -), ADediting_1140276(56347745, -), ADediting_1140277(56347753, -), ADediting_1140278(56347754, -), ADediting_1140279(56347762, -), ADediting_1140280(56348011, -), ADediting_1140281(56348016, -), ADediting_1140282(56348029, -), ADediting_1140283(56348039, -), ADediting_1140284(56348051, -), ADediting_1140285(56348068, -), ADediting_1140286(56348069, -), ADediting_1140287(56348088, -), ADediting_1140288(56348091, -), ADediting_1140289(56348284, -), ADediting_1140290(56348292, -), ADediting_1140291(56348296, -), ADediting_1140292(56348347, -), ADediting_1140293(56348354, -), ADediting_1140294(56348357, -), ADediting_1140295(56348383, -), ADediting_1140296(56348393, -), ADediting_1140297(56348401, -), ADediting_1140298(56348406, -), ADediting_1140299(56348411, -), ADediting_1140300(56348415, -), ADediting_1140301(56348419, -), ADediting_1140302(56348428, -), ADediting_1140303(56348430, -), ADediting_1140304(56348432, -), ADediting_1140305(56348433, -), ADediting_1140306(56348434, -), ADediting_1140307(56348437, -), ADediting_1140308(56348448, -), ADediting_1140309(56348449, -), ADediting_1140310(56348452, -), ADediting_1140311(56348456, -), ADediting_1140312(56348458, -), ADediting_1140313(56348468, -), ADediting_1140314(56348471, -), ADediting_1140315(56348473, -), ADediting_1140316(56348482, -), ADediting_1140317(56348505, -), ADediting_1140318(56348506, -), ADediting_1140319(56348513, -), ADediting_1140320(56348519, -), ADediting_1140321(56348522, -), ADediting_1140322(56348525, -), ADediting_1140323(56348528, -), ADediting_1140324(56348534, -), ADediting_1140325(56361194, -), ADediting_1140326(56361326, -), ADediting_1140327(56361357, -), ADediting_1140328(56361735, -), ADediting_1140329(56362332, -), ADediting_1140330(56362514, -), ADediting_1140331(56373237, -), ADediting_1140332(56373416, -), ADediting_1140333(56374123, -), ADediting_1140334(56374150, -), ADediting_1140335(56374176, -), ADediting_1140336(56374213, -), ADediting_1140337(56374231, -), ADediting_1140338(56374285, -), ADediting_1140339(56374286, -), ADediting_1140340(56374292, -), ADediting_1140341(56374334, -), ADediting_1140342(56374354, -), ADediting_1140343(56376161, -), ADediting_1140344(56376277, -), ADediting_1140345(56376285, -), ADediting_1140346(56376297, -), ADediting_1140347(56377897, -), ADediting_1140348(56377901, -), ADediting_1140349(56377902, -), ADediting_1140350(56377942, -), ADediting_1140351(56377943, -), ADediting_1140352(56377965, -), ADediting_1140353(56377969, -), ADediting_1140354(56377975, -), ADediting_1140355(56377978, -), ADediting_1140356(56377999, -), ADediting_1140357(56378010, -), ADediting_1140358(56378024, -), ADediting_1140359(56378025, -), ADediting_1140360(56378956, -), ADediting_1140361(56379160, -), ADediting_1140362(56379332, -), ADediting_1140363(56379391, -), ADediting_1140364(56381571, -), ADediting_1140365(56382813, -), ADediting_1140366(56382825, -), ADediting_1140367(56382826, -), ADediting_1140368(56382853, -), ADediting_1140369(56384939, -), ADediting_1140370(56385674, -), ADediting_1140371(56385683, -), ADediting_1140372(56385695, -), ADediting_1140373(56385735, -), ADediting_1140374(56385736, -), ADediting_1140375(56385742, -), ADediting_1140376(56385749, -), ADediting_1140377(56385762, -), ADediting_1140378(56385813, -), ADediting_1140379(56385814, -), ADediting_1140380(56385827, -), ADediting_1140381(56385829, -), ADediting_1140382(56385860, -), ADediting_1577837(56343287, -), ADediting_1577838(56346786, -), ADediting_1577839(56346825, -), ADediting_1577840(56346886, -), ADediting_1577841(56346941, -), ADediting_1577842(56347659, -), ADediting_1577843(56347672, -), ADediting_1577844(56347736, -), ADediting_1577845(56347767, -), ADediting_1577846(56347896, -), ADediting_1577847(56347908, -), ADediting_1577848(56348007, -), ADediting_1577849(56348027, -), ADediting_1577850(56348125, -), ADediting_1577851(56348307, -), ADediting_1577852(56348352, -), ADediting_1577853(56348403, -), ADediting_1577854(56348431, -), ADediting_1577855(56348497, -), ADediting_1577856(56348499, -), ADediting_1577857(56348527, -), ADediting_1577858(56348536, -), ADediting_1577859(56348550, -), ADediting_1577860(56352647, -), ADediting_1652443(56339250, -), ADediting_1652444(56348440, -), ADediting_1652445(56383397, -), |
Top |
RNA editing positional annotations for AASDH using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1140190 | chr4_56339216_- | intronic |
| ADediting_1140191 | chr4_56339239_- | intronic |
| ADediting_1140192 | chr4_56339242_- | intronic |
| ADediting_1140193 | chr4_56339259_- | intronic |
| ADediting_1140194 | chr4_56339286_- | intronic |
| ADediting_1140195 | chr4_56339314_- | intronic |
| ADediting_1140196 | chr4_56339317_- | intronic |
| ADediting_1140197 | chr4_56339322_- | intronic |
| ADediting_1140198 | chr4_56339323_- | intronic |
| ADediting_1140199 | chr4_56339324_- | intronic |
| ADediting_1140200 | chr4_56339325_- | intronic |
| ADediting_1140201 | chr4_56339326_- | intronic |
| ADediting_1140202 | chr4_56339350_- | intronic |
| ADediting_1140203 | chr4_56339363_- | intronic |
| ADediting_1140204 | chr4_56339374_- | intronic |
| ADediting_1140205 | chr4_56339417_- | intronic |
| ADediting_1140206 | chr4_56339424_- | intronic |
| ADediting_1140207 | chr4_56339488_- | intronic |
| ADediting_1140208 | chr4_56339494_- | intronic |
| ADediting_1140209 | chr4_56339505_- | intronic |
| ADediting_1140210 | chr4_56339506_- | intronic |
| ADediting_1140211 | chr4_56339558_- | intronic |
| ADediting_1140212 | chr4_56339587_- | intronic |
| ADediting_1140213 | chr4_56339588_- | intronic |
| ADediting_1140214 | chr4_56339710_- | intronic |
| ADediting_1140215 | chr4_56339912_- | intronic |
| ADediting_1140216 | chr4_56339924_- | intronic |
| ADediting_1140217 | chr4_56340053_- | intronic |
| ADediting_1140218 | chr4_56340086_- | intronic |
| ADediting_1140219 | chr4_56340107_- | intronic |
| ADediting_1140220 | chr4_56340122_- | intronic |
| ADediting_1140221 | chr4_56340123_- | intronic |
| ADediting_1140222 | chr4_56340160_- | intronic |
| ADediting_1140223 | chr4_56340167_- | intronic |
| ADediting_1140224 | chr4_56341445_- | intronic |
| ADediting_1140225 | chr4_56341460_- | intronic |
| ADediting_1140226 | chr4_56341489_- | intronic |
| ADediting_1140227 | chr4_56341490_- | intronic |
| ADediting_1140228 | chr4_56341498_- | intronic |
| ADediting_1140229 | chr4_56341504_- | intronic |
| ADediting_1140230 | chr4_56341531_- | intronic |
| ADediting_1140231 | chr4_56341539_- | intronic |
| ADediting_1140232 | chr4_56341596_- | intronic |
| ADediting_1140233 | chr4_56341604_- | intronic |
| ADediting_1140234 | chr4_56341606_- | intronic |
| ADediting_1140235 | chr4_56341619_- | intronic |
| ADediting_1140236 | chr4_56341630_- | intronic |
| ADediting_1140237 | chr4_56341668_- | intronic |
| ADediting_1140238 | chr4_56341673_- | intronic |
| ADediting_1140239 | chr4_56341674_- | intronic |
| ADediting_1140240 | chr4_56341692_- | intronic |
| ADediting_1140241 | chr4_56341864_- | intronic |
| ADediting_1140242 | chr4_56341867_- | intronic |
| ADediting_1140243 | chr4_56341877_- | intronic |
| ADediting_1140244 | chr4_56341907_- | intronic |
| ADediting_1140245 | chr4_56341915_- | intronic |
| ADediting_1140246 | chr4_56342012_- | intronic |
| ADediting_1140247 | chr4_56342025_- | intronic |
| ADediting_1140248 | chr4_56342026_- | intronic |
| ADediting_1140249 | chr4_56342029_- | intronic |
| ADediting_1140250 | chr4_56342076_- | intronic |
| ADediting_1140251 | chr4_56342102_- | intronic |
| ADediting_1140252 | chr4_56345009_- | intronic |
| ADediting_1140253 | chr4_56345038_- | intronic |
| ADediting_1140254 | chr4_56345039_- | intronic |
| ADediting_1140255 | chr4_56345106_- | intronic |
| ADediting_1140256 | chr4_56346808_- | intronic |
| ADediting_1140257 | chr4_56346838_- | intronic |
| ADediting_1140258 | chr4_56346839_- | intronic |
| ADediting_1140259 | chr4_56346840_- | intronic |
| ADediting_1140260 | chr4_56346903_- | intronic |
| ADediting_1140261 | chr4_56346908_- | intronic |
| ADediting_1140262 | chr4_56346959_- | intronic |
| ADediting_1140263 | chr4_56346981_- | intronic |
| ADediting_1140264 | chr4_56347645_- | intronic |
| ADediting_1140265 | chr4_56347657_- | intronic |
| ADediting_1140266 | chr4_56347658_- | intronic |
| ADediting_1140267 | chr4_56347667_- | intronic |
| ADediting_1140268 | chr4_56347684_- | intronic |
| ADediting_1140269 | chr4_56347685_- | intronic |
| ADediting_1140270 | chr4_56347697_- | intronic |
| ADediting_1140271 | chr4_56347698_- | intronic |
| ADediting_1140272 | chr4_56347699_- | intronic |
| ADediting_1140273 | chr4_56347710_- | intronic |
| ADediting_1140274 | chr4_56347730_- | intronic |
| ADediting_1140275 | chr4_56347744_- | intronic |
| ADediting_1140276 | chr4_56347745_- | intronic |
| ADediting_1140277 | chr4_56347753_- | intronic |
| ADediting_1140278 | chr4_56347754_- | intronic |
| ADediting_1140279 | chr4_56347762_- | intronic |
| ADediting_1140280 | chr4_56348011_- | intronic |
| ADediting_1140281 | chr4_56348016_- | intronic |
| ADediting_1140282 | chr4_56348029_- | intronic |
| ADediting_1140283 | chr4_56348039_- | intronic |
| ADediting_1140284 | chr4_56348051_- | intronic |
| ADediting_1140285 | chr4_56348068_- | intronic |
| ADediting_1140286 | chr4_56348069_- | intronic |
| ADediting_1140287 | chr4_56348088_- | intronic |
| ADediting_1140288 | chr4_56348091_- | intronic |
| ADediting_1140289 | chr4_56348284_- | intronic |
| ADediting_1140290 | chr4_56348292_- | intronic |
| ADediting_1140291 | chr4_56348296_- | intronic |
| ADediting_1140292 | chr4_56348347_- | intronic |
| ADediting_1140293 | chr4_56348354_- | intronic |
| ADediting_1140294 | chr4_56348357_- | intronic |
| ADediting_1140295 | chr4_56348383_- | intronic |
| ADediting_1140296 | chr4_56348393_- | intronic |
| ADediting_1140297 | chr4_56348401_- | intronic |
| ADediting_1140298 | chr4_56348406_- | intronic |
| ADediting_1140299 | chr4_56348411_- | intronic |
| ADediting_1140300 | chr4_56348415_- | intronic |
| ADediting_1140301 | chr4_56348419_- | intronic |
| ADediting_1140302 | chr4_56348428_- | intronic |
| ADediting_1140303 | chr4_56348430_- | intronic |
| ADediting_1140304 | chr4_56348432_- | intronic |
| ADediting_1140305 | chr4_56348433_- | intronic |
| ADediting_1140306 | chr4_56348434_- | intronic |
| ADediting_1140307 | chr4_56348437_- | intronic |
| ADediting_1140308 | chr4_56348448_- | intronic |
| ADediting_1140309 | chr4_56348449_- | intronic |
| ADediting_1140310 | chr4_56348452_- | intronic |
| ADediting_1140311 | chr4_56348456_- | intronic |
| ADediting_1140312 | chr4_56348458_- | intronic |
| ADediting_1140313 | chr4_56348468_- | intronic |
| ADediting_1140314 | chr4_56348471_- | intronic |
| ADediting_1140315 | chr4_56348473_- | intronic |
| ADediting_1140316 | chr4_56348482_- | intronic |
| ADediting_1140317 | chr4_56348505_- | intronic |
| ADediting_1140318 | chr4_56348506_- | intronic |
| ADediting_1140319 | chr4_56348513_- | intronic |
| ADediting_1140320 | chr4_56348519_- | intronic |
| ADediting_1140321 | chr4_56348522_- | intronic |
| ADediting_1140322 | chr4_56348525_- | intronic |
| ADediting_1140323 | chr4_56348528_- | intronic |
| ADediting_1140324 | chr4_56348534_- | intronic |
| ADediting_1140325 | chr4_56361194_- | intronic |
| ADediting_1140326 | chr4_56361326_- | intronic |
| ADediting_1140327 | chr4_56361357_- | intronic |
| ADediting_1140328 | chr4_56361735_- | intronic |
| ADediting_1140329 | chr4_56362332_- | intronic |
| ADediting_1140330 | chr4_56362514_- | intronic |
| ADediting_1140331 | chr4_56373237_- | intronic |
| ADediting_1140332 | chr4_56373416_- | intronic |
| ADediting_1140333 | chr4_56374123_- | intronic |
| ADediting_1140334 | chr4_56374150_- | intronic |
| ADediting_1140335 | chr4_56374176_- | intronic |
| ADediting_1140336 | chr4_56374213_- | intronic |
| ADediting_1140337 | chr4_56374231_- | intronic |
| ADediting_1140338 | chr4_56374285_- | intronic |
| ADediting_1140339 | chr4_56374286_- | intronic |
| ADediting_1140340 | chr4_56374292_- | intronic |
| ADediting_1140341 | chr4_56374334_- | intronic |
| ADediting_1140342 | chr4_56374354_- | intronic |
| ADediting_1140343 | chr4_56376161_- | intronic |
| ADediting_1140344 | chr4_56376277_- | intronic |
| ADediting_1140345 | chr4_56376285_- | intronic |
| ADediting_1140346 | chr4_56376297_- | intronic |
| ADediting_1140347 | chr4_56377897_- | intronic |
| ADediting_1140348 | chr4_56377901_- | intronic |
| ADediting_1140349 | chr4_56377902_- | intronic |
| ADediting_1140350 | chr4_56377942_- | intronic |
| ADediting_1140351 | chr4_56377943_- | intronic |
| ADediting_1140352 | chr4_56377965_- | intronic |
| ADediting_1140353 | chr4_56377969_- | intronic |
| ADediting_1140354 | chr4_56377975_- | intronic |
| ADediting_1140355 | chr4_56377978_- | intronic |
| ADediting_1140356 | chr4_56377999_- | intronic |
| ADediting_1140357 | chr4_56378010_- | intronic |
| ADediting_1140358 | chr4_56378024_- | intronic |
| ADediting_1140359 | chr4_56378025_- | intronic |
| ADediting_1140360 | chr4_56378956_- | intronic |
| ADediting_1140361 | chr4_56379160_- | intronic |
| ADediting_1140362 | chr4_56379332_- | intronic |
| ADediting_1140363 | chr4_56379391_- | intronic |
| ADediting_1140364 | chr4_56381571_- | intronic |
| ADediting_1140365 | chr4_56382813_- | intronic |
| ADediting_1140366 | chr4_56382825_- | intronic |
| ADediting_1140367 | chr4_56382826_- | intronic |
| ADediting_1140368 | chr4_56382853_- | intronic |
| ADediting_1140369 | chr4_56384939_- | intronic |
| ADediting_1140370 | chr4_56385674_- | intronic |
| ADediting_1140371 | chr4_56385683_- | intronic |
| ADediting_1140372 | chr4_56385695_- | intronic |
| ADediting_1140373 | chr4_56385735_- | intronic |
| ADediting_1140374 | chr4_56385736_- | intronic |
| ADediting_1140375 | chr4_56385742_- | intronic |
| ADediting_1140376 | chr4_56385749_- | intronic |
| ADediting_1140377 | chr4_56385762_- | intronic |
| ADediting_1140378 | chr4_56385813_- | intronic |
| ADediting_1140379 | chr4_56385814_- | intronic |
| ADediting_1140380 | chr4_56385827_- | intronic |
| ADediting_1140381 | chr4_56385829_- | intronic |
| ADediting_1140382 | chr4_56385860_- | intronic |
| ADediting_1577837 | chr4_56343287_- | intronic |
| ADediting_1577838 | chr4_56346786_- | intronic |
| ADediting_1577839 | chr4_56346825_- | intronic |
| ADediting_1577840 | chr4_56346886_- | intronic |
| ADediting_1577841 | chr4_56346941_- | intronic |
| ADediting_1577842 | chr4_56347659_- | intronic |
| ADediting_1577843 | chr4_56347672_- | intronic |
| ADediting_1577844 | chr4_56347736_- | intronic |
| ADediting_1577845 | chr4_56347767_- | intronic |
| ADediting_1577846 | chr4_56347896_- | intronic |
| ADediting_1577847 | chr4_56347908_- | intronic |
| ADediting_1577848 | chr4_56348007_- | intronic |
| ADediting_1577849 | chr4_56348027_- | intronic |
| ADediting_1577850 | chr4_56348125_- | intronic |
| ADediting_1577851 | chr4_56348307_- | intronic |
| ADediting_1577852 | chr4_56348352_- | intronic |
| ADediting_1577853 | chr4_56348403_- | intronic |
| ADediting_1577854 | chr4_56348431_- | intronic |
| ADediting_1577855 | chr4_56348497_- | intronic |
| ADediting_1577856 | chr4_56348499_- | intronic |
| ADediting_1577857 | chr4_56348527_- | intronic |
| ADediting_1577858 | chr4_56348536_- | intronic |
| ADediting_1577859 | chr4_56348550_- | intronic |
| ADediting_1577860 | chr4_56352647_- | intronic |
| ADediting_1652443 | chr4_56339250_- | intronic |
| ADediting_1652444 | chr4_56348440_- | intronic |
| ADediting_1652445 | chr4_56383397_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1140190 | chr4_56339216_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140191 | chr4_56339239_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140192 | chr4_56339242_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140193 | chr4_56339259_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140194 | chr4_56339286_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140195 | chr4_56339314_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140196 | chr4_56339317_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140197 | chr4_56339322_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140198 | chr4_56339323_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140199 | chr4_56339324_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140200 | chr4_56339325_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140201 | chr4_56339326_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140202 | chr4_56339350_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140203 | chr4_56339363_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140204 | chr4_56339374_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140205 | chr4_56339417_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140206 | chr4_56339424_- | SINE | Alu | Name=AluSc8 |
| ADediting_1140207 | chr4_56339488_- | SINE | Alu | Name=AluSx |
| ADediting_1140208 | chr4_56339494_- | SINE | Alu | Name=AluSx |
| ADediting_1140209 | chr4_56339505_- | SINE | Alu | Name=AluSx |
| ADediting_1140210 | chr4_56339506_- | SINE | Alu | Name=AluSx |
| ADediting_1140211 | chr4_56339558_- | SINE | Alu | Name=AluSx |
| ADediting_1140212 | chr4_56339587_- | SINE | Alu | Name=AluSx |
| ADediting_1140213 | chr4_56339588_- | SINE | Alu | Name=AluSx |
| ADediting_1140214 | chr4_56339710_- | SINE | Alu | Name=AluSx |
| ADediting_1140215 | chr4_56339912_- | SINE | Alu | Name=AluSx |
| ADediting_1140216 | chr4_56339924_- | SINE | Alu | Name=AluSx |
| ADediting_1140217 | chr4_56340053_- | SINE | Alu | Name=AluSx |
| ADediting_1140218 | chr4_56340086_- | SINE | Alu | Name=AluSx |
| ADediting_1140219 | chr4_56340107_- | SINE | Alu | Name=AluSx |
| ADediting_1140220 | chr4_56340122_- | SINE | Alu | Name=AluSx |
| ADediting_1140221 | chr4_56340123_- | SINE | Alu | Name=AluSx |
| ADediting_1140222 | chr4_56340160_- | SINE | Alu | Name=AluSx |
| ADediting_1140223 | chr4_56340167_- | SINE | Alu | Name=AluSx |
| ADediting_1140224 | chr4_56341445_- | SINE | Alu | Name=AluSc |
| ADediting_1140225 | chr4_56341460_- | SINE | Alu | Name=AluSc |
| ADediting_1140226 | chr4_56341489_- | SINE | Alu | Name=AluSc |
| ADediting_1140227 | chr4_56341490_- | SINE | Alu | Name=AluSc |
| ADediting_1140228 | chr4_56341498_- | SINE | Alu | Name=AluSc |
| ADediting_1140229 | chr4_56341504_- | SINE | Alu | Name=AluSc |
| ADediting_1140230 | chr4_56341531_- | SINE | Alu | Name=AluSc |
| ADediting_1140231 | chr4_56341539_- | SINE | Alu | Name=AluSc |
| ADediting_1140232 | chr4_56341596_- | SINE | Alu | Name=AluSc |
| ADediting_1140233 | chr4_56341604_- | SINE | Alu | Name=AluSc |
| ADediting_1140234 | chr4_56341606_- | SINE | Alu | Name=AluSc |
| ADediting_1140235 | chr4_56341619_- | SINE | Alu | Name=AluSc |
| ADediting_1140236 | chr4_56341630_- | SINE | Alu | Name=AluSc |
| ADediting_1140237 | chr4_56341668_- | SINE | Alu | Name=AluSc |
| ADediting_1140238 | chr4_56341673_- | SINE | Alu | Name=AluSc |
| ADediting_1140239 | chr4_56341674_- | SINE | Alu | Name=AluSc |
| ADediting_1140240 | chr4_56341692_- | SINE | Alu | Name=AluSc |
| ADediting_1140241 | chr4_56341864_- | SINE | Alu | Name=AluSz |
| ADediting_1140242 | chr4_56341867_- | SINE | Alu | Name=AluSz |
| ADediting_1140243 | chr4_56341877_- | SINE | Alu | Name=AluSz |
| ADediting_1140244 | chr4_56341907_- | SINE | Alu | Name=AluSz |
| ADediting_1140245 | chr4_56341915_- | SINE | Alu | Name=AluSz |
| ADediting_1140246 | chr4_56342012_- | SINE | Alu | Name=AluSz |
| ADediting_1140247 | chr4_56342025_- | SINE | Alu | Name=AluSz |
| ADediting_1140248 | chr4_56342026_- | SINE | Alu | Name=AluSz |
| ADediting_1140249 | chr4_56342029_- | SINE | Alu | Name=AluSz |
| ADediting_1140250 | chr4_56342076_- | SINE | Alu | Name=AluSz |
| ADediting_1140251 | chr4_56342102_- | SINE | Alu | Name=AluSz |
| ADediting_1140252 | chr4_56345009_- | SINE | Alu | Name=AluSx |
| ADediting_1140253 | chr4_56345038_- | SINE | Alu | Name=AluSx |
| ADediting_1140254 | chr4_56345039_- | SINE | Alu | Name=AluSx |
| ADediting_1140255 | chr4_56345106_- | SINE | Alu | Name=AluSx |
| ADediting_1140256 | chr4_56346808_- | SINE | Alu | Name=AluJo |
| ADediting_1140257 | chr4_56346838_- | SINE | Alu | Name=AluJo |
| ADediting_1140258 | chr4_56346839_- | SINE | Alu | Name=AluJo |
| ADediting_1140259 | chr4_56346840_- | SINE | Alu | Name=AluJo |
| ADediting_1140260 | chr4_56346903_- | SINE | Alu | Name=AluJo |
| ADediting_1140261 | chr4_56346908_- | SINE | Alu | Name=AluJo |
| ADediting_1140262 | chr4_56346959_- | SINE | Alu | Name=AluJo |
| ADediting_1140263 | chr4_56346981_- | SINE | Alu | Name=AluJo |
| ADediting_1140264 | chr4_56347645_- | SINE | Alu | Name=AluJb |
| ADediting_1140265 | chr4_56347657_- | SINE | Alu | Name=AluJb |
| ADediting_1140266 | chr4_56347658_- | SINE | Alu | Name=AluJb |
| ADediting_1140267 | chr4_56347667_- | SINE | Alu | Name=AluJb |
| ADediting_1140268 | chr4_56347684_- | SINE | Alu | Name=AluJb |
| ADediting_1140269 | chr4_56347685_- | SINE | Alu | Name=AluJb |
| ADediting_1140270 | chr4_56347697_- | SINE | Alu | Name=AluJb |
| ADediting_1140271 | chr4_56347698_- | SINE | Alu | Name=AluJb |
| ADediting_1140272 | chr4_56347699_- | SINE | Alu | Name=AluJb |
| ADediting_1140273 | chr4_56347710_- | SINE | Alu | Name=AluJb |
| ADediting_1140274 | chr4_56347730_- | SINE | Alu | Name=AluJb |
| ADediting_1140275 | chr4_56347744_- | SINE | Alu | Name=AluJb |
| ADediting_1140276 | chr4_56347745_- | SINE | Alu | Name=AluJb |
| ADediting_1140277 | chr4_56347753_- | SINE | Alu | Name=AluJb |
| ADediting_1140278 | chr4_56347754_- | SINE | Alu | Name=AluJb |
| ADediting_1140279 | chr4_56347762_- | SINE | Alu | Name=AluJb |
| ADediting_1140280 | chr4_56348011_- | SINE | Alu | Name=AluSg |
| ADediting_1140281 | chr4_56348016_- | SINE | Alu | Name=AluSg |
| ADediting_1140282 | chr4_56348029_- | SINE | Alu | Name=AluSg |
| ADediting_1140283 | chr4_56348039_- | SINE | Alu | Name=AluSg |
| ADediting_1140284 | chr4_56348051_- | SINE | Alu | Name=AluSg |
| ADediting_1140285 | chr4_56348068_- | SINE | Alu | Name=AluSg |
| ADediting_1140286 | chr4_56348069_- | SINE | Alu | Name=AluSg |
| ADediting_1140287 | chr4_56348088_- | SINE | Alu | Name=AluSg |
| ADediting_1140288 | chr4_56348091_- | SINE | Alu | Name=AluSg |
| ADediting_1140289 | chr4_56348284_- | SINE | Alu | Name=AluJb |
| ADediting_1140290 | chr4_56348292_- | SINE | Alu | Name=AluJb |
| ADediting_1140291 | chr4_56348296_- | SINE | Alu | Name=AluJb |
| ADediting_1140292 | chr4_56348347_- | SINE | Alu | Name=AluJb |
| ADediting_1140293 | chr4_56348354_- | SINE | Alu | Name=AluJb |
| ADediting_1140294 | chr4_56348357_- | SINE | Alu | Name=AluJb |
| ADediting_1140295 | chr4_56348383_- | SINE | Alu | Name=AluJb |
| ADediting_1140296 | chr4_56348393_- | SINE | Alu | Name=AluJb |
| ADediting_1140297 | chr4_56348401_- | SINE | Alu | Name=AluJb |
| ADediting_1140298 | chr4_56348406_- | SINE | Alu | Name=AluJb |
| ADediting_1140299 | chr4_56348411_- | SINE | Alu | Name=AluJb |
| ADediting_1140300 | chr4_56348415_- | SINE | Alu | Name=AluJb |
| ADediting_1140301 | chr4_56348419_- | SINE | Alu | Name=AluJb |
| ADediting_1140302 | chr4_56348428_- | SINE | Alu | Name=AluJb |
| ADediting_1140303 | chr4_56348430_- | SINE | Alu | Name=AluJb |
| ADediting_1140304 | chr4_56348432_- | SINE | Alu | Name=AluJb |
| ADediting_1140305 | chr4_56348433_- | SINE | Alu | Name=AluJb |
| ADediting_1140306 | chr4_56348434_- | SINE | Alu | Name=AluJb |
| ADediting_1140307 | chr4_56348437_- | SINE | Alu | Name=AluJb |
| ADediting_1140308 | chr4_56348448_- | SINE | Alu | Name=AluJb |
| ADediting_1140309 | chr4_56348449_- | SINE | Alu | Name=AluJb |
| ADediting_1140310 | chr4_56348452_- | SINE | Alu | Name=AluJb |
| ADediting_1140311 | chr4_56348456_- | SINE | Alu | Name=AluJb |
| ADediting_1140312 | chr4_56348458_- | SINE | Alu | Name=AluJb |
| ADediting_1140313 | chr4_56348468_- | SINE | Alu | Name=AluJb |
| ADediting_1140314 | chr4_56348471_- | SINE | Alu | Name=AluJb |
| ADediting_1140315 | chr4_56348473_- | SINE | Alu | Name=AluJb |
| ADediting_1140316 | chr4_56348482_- | SINE | Alu | Name=AluJb |
| ADediting_1140317 | chr4_56348505_- | SINE | Alu | Name=AluJb |
| ADediting_1140318 | chr4_56348506_- | SINE | Alu | Name=AluJb |
| ADediting_1140319 | chr4_56348513_- | SINE | Alu | Name=AluJb |
| ADediting_1140320 | chr4_56348519_- | SINE | Alu | Name=AluJb |
| ADediting_1140321 | chr4_56348522_- | SINE | Alu | Name=AluJb |
| ADediting_1140322 | chr4_56348525_- | SINE | Alu | Name=AluJb |
| ADediting_1140323 | chr4_56348528_- | SINE | Alu | Name=AluJb |
| ADediting_1140324 | chr4_56348534_- | SINE | Alu | Name=AluJb |
| ADediting_1140325 | chr4_56361194_- | SINE | Alu | Name=AluSz |
| ADediting_1140326 | chr4_56361326_- | SINE | Alu | Name=AluSz |
| ADediting_1140327 | chr4_56361357_- | SINE | Alu | Name=AluSz |
| ADediting_1140328 | chr4_56361735_- | SINE | Alu | Name=AluJr |
| ADediting_1140329 | chr4_56362332_- | SINE | Alu | Name=AluSx |
| ADediting_1140330 | chr4_56362514_- | SINE | Alu | Name=AluSx |
| ADediting_1140331 | chr4_56373237_- | SINE | Alu | Name=AluSz |
| ADediting_1140332 | chr4_56373416_- | SINE | Alu | Name=AluSz |
| ADediting_1140333 | chr4_56374123_- | SINE | Alu | Name=AluSz |
| ADediting_1140334 | chr4_56374150_- | SINE | Alu | Name=AluSz |
| ADediting_1140335 | chr4_56374176_- | SINE | Alu | Name=AluSz |
| ADediting_1140336 | chr4_56374213_- | SINE | Alu | Name=AluSz |
| ADediting_1140337 | chr4_56374231_- | SINE | Alu | Name=AluSz |
| ADediting_1140338 | chr4_56374285_- | SINE | Alu | Name=AluSz |
| ADediting_1140339 | chr4_56374286_- | SINE | Alu | Name=AluSz |
| ADediting_1140340 | chr4_56374292_- | SINE | Alu | Name=AluSz |
| ADediting_1140341 | chr4_56374334_- | SINE | Alu | Name=AluSz |
| ADediting_1140342 | chr4_56374354_- | SINE | Alu | Name=AluSz |
| ADediting_1140343 | chr4_56376161_- | SINE | Alu | Name=AluJb |
| ADediting_1140344 | chr4_56376277_- | SINE | Alu | Name=AluJb |
| ADediting_1140345 | chr4_56376285_- | SINE | Alu | Name=AluJb |
| ADediting_1140346 | chr4_56376297_- | SINE | Alu | Name=AluJb |
| ADediting_1140347 | chr4_56377897_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140348 | chr4_56377901_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140349 | chr4_56377902_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140350 | chr4_56377942_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140351 | chr4_56377943_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140352 | chr4_56377965_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140353 | chr4_56377969_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140354 | chr4_56377975_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140355 | chr4_56377978_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140356 | chr4_56377999_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140357 | chr4_56378010_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140358 | chr4_56378024_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140359 | chr4_56378025_- | SINE | Alu | Name=AluSx1 |
| ADediting_1140360 | chr4_56378956_- | SINE | Alu | Name=AluY |
| ADediting_1140361 | chr4_56379160_- | SINE | Alu | Name=AluY |
| ADediting_1140362 | chr4_56379332_- | SINE | Alu | Name=AluJr |
| ADediting_1140363 | chr4_56379391_- | SINE | Alu | Name=AluJr |
| ADediting_1140364 | chr4_56381571_- | SINE | Alu | Name=AluSz |
| ADediting_1140365 | chr4_56382813_- | SINE | Alu | Name=AluSp |
| ADediting_1140366 | chr4_56382825_- | SINE | Alu | Name=AluSp |
| ADediting_1140367 | chr4_56382826_- | SINE | Alu | Name=AluSp |
| ADediting_1140368 | chr4_56382853_- | SINE | Alu | Name=AluSp |
| ADediting_1140369 | chr4_56384939_- | SINE | Alu | Name=AluSz |
| ADediting_1140370 | chr4_56385674_- | SINE | Alu | Name=AluSz |
| ADediting_1140371 | chr4_56385683_- | SINE | Alu | Name=AluSz |
| ADediting_1140372 | chr4_56385695_- | SINE | Alu | Name=AluSz |
| ADediting_1140373 | chr4_56385735_- | SINE | Alu | Name=AluSz |
| ADediting_1140374 | chr4_56385736_- | SINE | Alu | Name=AluSz |
| ADediting_1140375 | chr4_56385742_- | SINE | Alu | Name=AluSz |
| ADediting_1140376 | chr4_56385749_- | SINE | Alu | Name=AluSz |
| ADediting_1140377 | chr4_56385762_- | SINE | Alu | Name=AluSz |
| ADediting_1140378 | chr4_56385813_- | SINE | Alu | Name=AluSz |
| ADediting_1140379 | chr4_56385814_- | SINE | Alu | Name=AluSz |
| ADediting_1140380 | chr4_56385827_- | SINE | Alu | Name=AluSz |
| ADediting_1140381 | chr4_56385829_- | SINE | Alu | Name=AluSz |
| ADediting_1140382 | chr4_56385860_- | SINE | Alu | Name=AluSz |
| ADediting_1577837 | chr4_56343287_- | SINE | Alu | Name=AluSz6 |
| ADediting_1577838 | chr4_56346786_- | SINE | Alu | Name=AluJo |
| ADediting_1577839 | chr4_56346825_- | SINE | Alu | Name=AluJo |
| ADediting_1577840 | chr4_56346886_- | SINE | Alu | Name=AluJo |
| ADediting_1577841 | chr4_56346941_- | SINE | Alu | Name=AluJo |
| ADediting_1577842 | chr4_56347659_- | SINE | Alu | Name=AluJb |
| ADediting_1577843 | chr4_56347672_- | SINE | Alu | Name=AluJb |
| ADediting_1577844 | chr4_56347736_- | SINE | Alu | Name=AluJb |
| ADediting_1577845 | chr4_56347767_- | SINE | Alu | Name=AluJb |
| ADediting_1577846 | chr4_56347896_- | SINE | Alu | Name=AluSg |
| ADediting_1577847 | chr4_56347908_- | SINE | Alu | Name=AluSg |
| ADediting_1577848 | chr4_56348007_- | SINE | Alu | Name=AluSg |
| ADediting_1577849 | chr4_56348027_- | SINE | Alu | Name=AluSg |
| ADediting_1577850 | chr4_56348125_- | SINE | Alu | Name=AluSg |
| ADediting_1577851 | chr4_56348307_- | SINE | Alu | Name=AluJb |
| ADediting_1577852 | chr4_56348352_- | SINE | Alu | Name=AluJb |
| ADediting_1577853 | chr4_56348403_- | SINE | Alu | Name=AluJb |
| ADediting_1577854 | chr4_56348431_- | SINE | Alu | Name=AluJb |
| ADediting_1577855 | chr4_56348497_- | SINE | Alu | Name=AluJb |
| ADediting_1577856 | chr4_56348499_- | SINE | Alu | Name=AluJb |
| ADediting_1577857 | chr4_56348527_- | SINE | Alu | Name=AluJb |
| ADediting_1577858 | chr4_56348536_- | SINE | Alu | Name=AluJb |
| ADediting_1577859 | chr4_56348550_- | SINE | Alu | Name=AluJb |
| ADediting_1577860 | chr4_56352647_- | SINE | Alu | Name=AluSz |
| ADediting_1652443 | chr4_56339250_- | SINE | Alu | Name=AluSc8 |
| ADediting_1652444 | chr4_56348440_- | SINE | Alu | Name=AluJb |
| ADediting_1652445 | chr4_56383397_- | SINE | Alu | Name=AluJr |
Top |
RNA A-to-I editing events in the alternative splicing sites for AASDH |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_1140275 | chr4_56347744_- | 56347732:56347754 | 3ss | 10i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAGTTTTTGTAGAGA | 0.47 |
| ES | ADediting_1140275 | chr4_56347744_- | 56347732:56347754 | 3ss | 10i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAGTTTTTGTAGAGA | 0.47 |
| ES | ADediting_1140275 | chr4_56347744_- | 56347732:56347754 | 3ss | 10i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAGTTTTTGTAGAGA | 0.47 |
| ES | ADediting_1140276 | chr4_56347745_- | 56347732:56347754 | 3ss | 11i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTGATTTTTGTAGAGA | 6.57 |
| ES | ADediting_1140276 | chr4_56347745_- | 56347732:56347754 | 3ss | 11i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTGATTTTTGTAGAGA | 6.57 |
| ES | ADediting_1140276 | chr4_56347745_- | 56347732:56347754 | 3ss | 11i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTGATTTTTGTAGAGA | 6.57 |
| ES | ADediting_1140277 | chr4_56347753_- | 56347732:56347754 | 3ss | 19i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AGTGTTTGTAATTTTTGTAGAGA | 5.00 |
| ES | ADediting_1140278 | chr4_56347754_- | 56347732:56347754 | 3ss | 20i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | GATGTTTGTAATTTTTGTAGAGA | 5.66 |
| ES | ADediting_1577844 | chr4_56347736_- | 56347732:56347754 | 3ss | 2i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAATTTTTGTGGAGA | -2.14 |
| ES | ADediting_1577844 | chr4_56347736_- | 56347732:56347754 | 3ss | 2i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAATTTTTGTGGAGA | -2.14 |
| ES | ADediting_1577844 | chr4_56347736_- | 56347732:56347754 | 3ss | 2i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAATTTTTGTGGAGA | -2.14 |
| ES | ADediting_1140262 | chr4_56346959_- | 56346952:56346960 | 5ss | 2e | CAGGTGATG | 5.99 | CGGGTGATG | 2.75 |
| ES | ADediting_1140262 | chr4_56346959_- | 56346952:56346960 | 5ss | 2e | CAGGTGATG | 5.99 | CGGGTGATG | 2.75 |
| ES | ADediting_1140262 | chr4_56346959_- | 56346952:56346960 | 5ss | 2e | CAGGTGATG | 5.99 | CGGGTGATG | 2.75 |
| ES | ADediting_1140262 | chr4_56346959_- | 56346952:56346960 | 5ss | 2e | CAGGTGATG | 5.99 | CGGGTGATG | 2.75 |
| ME1 | ADediting_1140275 | chr4_56347744_- | 56347732:56347754 | 3ss | 10i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAGTTTTTGTAGAGA | 0.47 |
| ME1 | ADediting_1140276 | chr4_56347745_- | 56347732:56347754 | 3ss | 11i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTGATTTTTGTAGAGA | 6.57 |
| ME1 | ADediting_1140277 | chr4_56347753_- | 56347732:56347754 | 3ss | 19i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AGTGTTTGTAATTTTTGTAGAGA | 5.00 |
| ME1 | ADediting_1140278 | chr4_56347754_- | 56347732:56347754 | 3ss | 20i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | GATGTTTGTAATTTTTGTAGAGA | 5.66 |
| ME1 | ADediting_1577844 | chr4_56347736_- | 56347732:56347754 | 3ss | 2i | AATGTTTGTAATTTTTGTAGAGA | 5.81 | AATGTTTGTAATTTTTGTGGAGA | -2.14 |
| ME2 | ADediting_1140262 | chr4_56346959_- | 56346952:56346960 | 5ss | 2e | CAGGTGATG | 5.99 | CGGGTGATG | 2.75 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for AASDH |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for AASDH |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for AASDH |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000157426.14 | ENST00000502617.1 | AASDH-203 | hsa-miR-381-3p | chr4 | 56349069 | 56349076 | 8mer-1a | 56349069 | 56349094 | 143 | -15.54 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_843620 | chr2_207754818_+ | ENSG00000157426.14 | ENST00000502617.1 | AASDH-203 | hsa-miR-4775 | chr4 | 56349141 | 56349147 | 7mer-m8 | 56349140 | 56349162 | 151 | -8.74 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for AASDH |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for AASDH |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1140221 | chr4_56340123_- | 0.11249093047936 | 0.0903215349714825 | 0.413239854208051 | 0.0466340518398231 | 1.16180540633347e-08 | 0.316925028500949 |
| DLPFC | ADediting_1140230 | chr4_56341531_- | 0.202846076511049 | -0.072526777757488 | 0.00447809004957991 | -0.161030869540815 | 1.63645535660227e-09 | 0.33396445044302 |
| DLPFC | ADediting_1140246 | chr4_56342012_- | 0.625336336510302 | -0.0278407517704705 | 0.0194613189882165 | -0.132657384154535 | 4.10164501837428e-09 | 0.326107593853546 |
| CER | ADediting_1140252 | chr4_56345009_- | 0.000554537879418377 | 0.278656000307608 | 3.04590562513433e-07 | 0.403550249414984 | 0.340572016539216 | 0.0783507712773218 |
| CER | ADediting_1140256 | chr4_56346808_- | 4.09301413432819e-12 | 0.527394047691137 | 1.62422964324819e-14 | 0.57391871970432 | 0.000163213685169276 | 0.303086225194998 |
| DLPFC | ADediting_1140259 | chr4_56346840_- | 0.00752315847696876 | 0.151536731103966 | 0.658446115534489 | 0.0252051284357268 | 3.87653057373655e-16 | 0.440385785111423 |
| CER | ADediting_1140259 | chr4_56346840_- | 3.99430852195111e-09 | 0.457408813753561 | 1.38835705555254e-10 | 0.493541583857447 | 6.47508456527368e-05 | 0.320221032681133 |
| TCX | ADediting_1140259 | chr4_56346840_- | 0.0366560909173481 | 0.170786141222597 | 0.765832743146886 | -0.0245191938898821 | 5.1807293125099e-05 | 0.324203544400591 |
| CER | ADediting_1140260 | chr4_56346903_- | 8.27345324799047e-05 | 0.315779048144007 | 3.65091366564806e-07 | 0.401080198563611 | 0.868685195398644 | 0.0136122874699963 |
| CER | ADediting_1140262 | chr4_56346959_- | 2.55146414227231e-05 | 0.336497079860213 | 9.1492143726138e-08 | 0.419461369524587 | 0.00422676975579335 | 0.232315963055067 |
| CER | ADediting_1140263 | chr4_56346981_- | 4.68443089640308e-08 | 0.427973723601383 | 5.61334682328724e-10 | 0.479022457407245 | 0.035721409342594 | 0.17163244231568 |
| CER | ADediting_1140264 | chr4_56347645_- | 2.84777334290786e-09 | 0.461244246525114 | 3.54911446993109e-12 | 0.528688196875118 | 0.0269616720920689 | 0.18063759227846 |
| CER | ADediting_1140265 | chr4_56347657_- | 0.000152473411559216 | 0.304384155277192 | 2.01036729246218e-06 | 0.37678413692367 | 0.0486207875258772 | 0.161298590620462 |
| DLPFC | ADediting_1140267 | chr4_56347667_- | 0.00011066787675362 | 0.217808002650714 | 0.0282741875601258 | 0.124597700248583 | 1.84117258222148e-09 | 0.332968938364327 |
| CER | ADediting_1140267 | chr4_56347667_- | 1.32347741252536e-15 | 0.592833088176335 | 1.22074251020805e-13 | 0.557770319265408 | 0.00268410156957029 | 0.243432425358098 |
| DLPFC | ADediting_1140268 | chr4_56347684_- | 0.000377429178332319 | 0.200684750023362 | 0.0468626682644797 | 0.112979382173126 | 2.53758013683119e-08 | 0.309825413118032 |
| CER | ADediting_1140268 | chr4_56347684_- | 1.94280217300293e-11 | 0.512890004390897 | 3.3644108744856e-11 | 0.507608357575599 | 0.000140797879369506 | 0.305895530161058 |
| DLPFC | ADediting_1140270 | chr4_56347697_- | 0.00153966812690471 | 0.179145593663248 | 0.261122932112608 | 0.0640173253373942 | 5.9378779441781e-11 | 0.360621473523775 |
| CER | ADediting_1140270 | chr4_56347697_- | 4.21553684738722e-14 | 0.566392153711731 | 1.03045625136937e-10 | 0.49655374336789 | 0.0107262791377133 | 0.207787736390242 |
| DLPFC | ADediting_1140271 | chr4_56347698_- | 0.00315259109496757 | 0.167181762384816 | 0.171863585148471 | 0.0777938552862277 | 1.17094952972434e-09 | 0.336772184438079 |
| CER | ADediting_1140271 | chr4_56347698_- | 5.03823734505202e-17 | 0.615763777492136 | 7.01195224878583e-18 | 0.628749735000415 | 2.56878379633044e-05 | 0.336382098922379 |
| DLPFC | ADediting_1140272 | chr4_56347699_- | 0.00245209644322334 | 0.171463266333372 | 0.428375056682193 | 0.0451405997416641 | 4.34545462559205e-12 | 0.380020711027574 |
| CER | ADediting_1140272 | chr4_56347699_- | 1.15724262232741e-14 | 0.576548423318267 | 1.22566132772256e-11 | 0.517251823111764 | 0.000611886663819789 | 0.276591101571291 |
| CER | ADediting_1140273 | chr4_56347710_- | 9.13430048966783e-14 | 0.560146746861503 | 1.08516973639623e-16 | 0.610544164479557 | 0.00668579272751432 | 0.220553549870709 |
| CER | ADediting_1140275 | chr4_56347744_- | 1.49552734811806e-06 | 0.381139586096576 | 5.45086303136455e-05 | 0.323300757369243 | 0.744101148987176 | 0.0268726582989821 |
| CER | ADediting_1140276 | chr4_56347745_- | 8.64287308116642e-09 | 0.448477351710463 | 2.71656276571472e-07 | 0.405100098192891 | 0.523749499806481 | 0.052460885109191 |
| CER | ADediting_1140280 | chr4_56348011_- | 1.52181549635773e-05 | 0.345148344021722 | 0.000136985653292682 | 0.306414396478876 | 0.631513558471602 | -0.0394739287333895 |
| CER | ADediting_1140281 | chr4_56348016_- | 1.43825050294302e-05 | 0.346078479216602 | 3.65151200751535e-08 | 0.431082371242764 | 0.917408526721316 | 0.00853822850601076 |
| CER | ADediting_1140283 | chr4_56348039_- | 4.93274216407394e-05 | 0.325072069203155 | 2.14533386722373e-06 | 0.375819017232383 | 0.064725080614046 | 0.151215864931917 |
| DLPFC | ADediting_1140285 | chr4_56348068_- | 0.00123623229058842 | 0.182665455469632 | 0.264553822716998 | 0.0635597455804136 | 5.4156220011066e-16 | 0.438418139352003 |
| CER | ADediting_1140287 | chr4_56348088_- | 7.89917369331092e-06 | 0.35577064627348 | 7.89386403947446e-08 | 0.421358296807649 | 0.117926064839421 | 0.128207440034345 |
| CER | ADediting_1140288 | chr4_56348091_- | 3.52816501976141e-05 | 0.330936531631458 | 5.88397323477925e-08 | 0.425100919220345 | 0.266835060520857 | 0.0912361955748064 |
| CER | ADediting_1140292 | chr4_56348347_- | 3.17725712640053e-10 | 0.485019636654619 | 6.1820981576862e-09 | 0.45238621079545 | 0.0199105619276122 | 0.189937950153879 |
| CER | ADediting_1140293 | chr4_56348354_- | 5.32168619861507e-11 | 0.503127561352138 | 1.26564961611417e-06 | 0.383569207834711 | 0.0880903504619164 | 0.139743109402275 |
| CER | ADediting_1140294 | chr4_56348357_- | 6.59927185112772e-07 | 0.392867417824972 | 5.43603176762288e-06 | 0.36165779460223 | 0.358137139064557 | 0.0755542816488932 |
| CER | ADediting_1140295 | chr4_56348383_- | 1.53275738729076e-06 | 0.380779957593283 | 2.48780687867558e-08 | 0.435810909714014 | 0.00246212774374559 | 0.24549063283644 |
| CER | ADediting_1140297 | chr4_56348401_- | 1.7790421884841e-07 | 0.410766000812763 | 2.94377183379815e-06 | 0.371074750422775 | 0.0549720070513525 | 0.157033722408947 |
| CER | ADediting_1140298 | chr4_56348406_- | 9.60741716412727e-10 | 0.473251378356262 | 5.38592158410519e-06 | 0.361802212330697 | 0.101543199959586 | 0.134211763483457 |
| TCX | ADediting_1140298 | chr4_56348406_- | 0.145755988481892 | 0.119348120129492 | 0.324512163547711 | -0.0809887899180236 | 0.000146232053981672 | 0.305178106020054 |
| CER | ADediting_1140299 | chr4_56348411_- | 3.58435296373029e-08 | 0.43131278399821 | 3.5246663302202e-06 | 0.368340393261355 | 0.0315703186940436 | 0.175633625132377 |
| CER | ADediting_1140300 | chr4_56348415_- | 1.62672395794019e-09 | 0.467490000645944 | 1.3800383755018e-07 | 0.414115873804071 | 0.015829405869784 | 0.196722952535802 |
| CER | ADediting_1140301 | chr4_56348419_- | 1.03292289225503e-07 | 0.417893344851041 | 9.92312149178494e-07 | 0.387076605152392 | 0.00621405308343591 | 0.222469422771209 |
| CER | ADediting_1140307 | chr4_56348437_- | 1.39339877722358e-05 | 0.346598964823888 | 2.90590341593841e-05 | 0.334278262374523 | 0.489058532551923 | 0.0569161229554769 |
| DLPFC | ADediting_1140308 | chr4_56348448_- | 0.863053716146833 | 0.00983617174566288 | 0.0792897866147638 | -0.0998213662562689 | 9.01819440621962e-16 | 0.435392242757476 |
| CER | ADediting_1140308 | chr4_56348448_- | 3.51242418872026e-06 | 0.368393456943089 | 8.9807704059122e-06 | 0.353721766326655 | 0.047711247001922 | 0.161946695056829 |
| CER | ADediting_1140309 | chr4_56348449_- | 5.92793132977207e-06 | 0.360303511357877 | 6.65935959718197e-06 | 0.358474790527617 | 0.0147217560583101 | 0.198826676441263 |
| CER | ADediting_1140310 | chr4_56348452_- | 2.77700227180172e-06 | 0.37195489144736 | 3.72549808294979e-06 | 0.36749398204488 | 0.146878650698911 | 0.119018905192669 |
| CER | ADediting_1140312 | chr4_56348458_- | 1.68324826161613e-05 | 0.343480492310419 | 0.000117287811964926 | 0.309330987538436 | 0.612004493444623 | 0.0417450267406852 |
| CER | ADediting_1140313 | chr4_56348468_- | 1.66252130709936e-06 | 0.379588344482013 | 3.94443336466628e-06 | 0.366619242830241 | 0.0885169403063798 | 0.139557726034489 |
| CER | ADediting_1140316 | chr4_56348482_- | 4.18747929297259e-06 | 0.365700560524601 | 3.64232304351257e-07 | 0.401112443694202 | 0.099969022495942 | 0.134827878880263 |
| DLPFC | ADediting_1140317 | chr4_56348505_- | 0.40495468241293 | 0.0474652310578162 | 0.160074620645066 | -0.0799836826557638 | 2.24641646367628e-14 | 0.415583774202234 |
| CER | ADediting_1140317 | chr4_56348505_- | 0.000445277115206001 | 0.283203822479021 | 9.35918476433633e-05 | 0.313517639154998 | 0.141413139631558 | 0.120640041374171 |
| TCX | ADediting_1140317 | chr4_56348505_- | 4.16128850670418e-05 | 0.328063214672528 | 0.00144701711593634 | 0.257808734554286 | 0.295234583318451 | 0.0860243889641237 |
| DLPFC | ADediting_1140318 | chr4_56348506_- | 0.275738793047347 | 0.0620956272029687 | 0.13961598722675 | -0.084091642832702 | 5.28331036972493e-16 | 0.438564142643119 |
| CER | ADediting_1140318 | chr4_56348506_- | 6.64370226808765e-06 | 0.358511901006447 | 5.49577798691588e-07 | 0.395429654239661 | 0.0202311222232308 | 0.189457706524032 |
| TCX | ADediting_1140318 | chr4_56348506_- | 5.20893173904579e-05 | 0.324107253554989 | 0.00080144342672222 | 0.270845122338804 | 0.13358362066698 | 0.123047593728747 |
| DLPFC | ADediting_1140319 | chr4_56348513_- | 0.142850429907017 | 0.0834129622914801 | 0.42617563523596 | -0.0453556938212116 | 7.52468715477268e-18 | 0.462672737038609 |
| CER | ADediting_1140319 | chr4_56348513_- | 4.15484077873583e-05 | 0.328090344218364 | 1.75283942872689e-05 | 0.342807634823245 | 0.00972156029295446 | 0.210501650661835 |
| DLPFC | ADediting_1140324 | chr4_56348534_- | 0.29446746434219 | 0.0597316227796463 | 0.177766245102826 | -0.0767393085111618 | 2.5558175292819e-19 | 0.480578273549263 |
| CER | ADediting_1140324 | chr4_56348534_- | 0.000159867240701448 | 0.303481880825486 | 0.00110113852313989 | 0.26391672771873 | 0.231424888944583 | 0.0982953262538845 |
| DLPFC | ADediting_1140371 | chr4_56385683_- | 0.976221712493914 | -0.00169973670297318 | 0.0804680825297294 | -0.0994339159136222 | 4.3358690055526e-12 | 0.380036560643937 |
| DLPFC | ADediting_1140373 | chr4_56385735_- | 0.704217963788952 | -0.0216466179819255 | 0.0495652310429637 | -0.111632634186934 | 3.82100162037116e-09 | 0.326721639504392 |
| DLPFC | ADediting_1140376 | chr4_56385749_- | 0.971967898216914 | 0.00200392604514355 | 0.149645992757724 | -0.0820243874046861 | 1.61177140553039e-12 | 0.387054308852919 |
| CER | ADediting_1577848 | chr4_56348007_- | 4.33586766797132e-05 | 0.327343265871614 | 6.13324730953282e-07 | 0.393895507850973 | 0.724847210593072 | 0.0289760672742787 |
| CER | ADediting_1577850 | chr4_56348125_- | 0.000866647252390227 | 0.269156147606184 | 3.39756472974319e-05 | 0.331589180526531 | 0.625419229109805 | 0.040180111905776 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.63522415563794e-09 | 0.333970795705444 | 7.46679648015287e-08 | 0.299697610065919 | 0.000680871951003522 | 0.191924738029906 |
| AC | 1.59464744606775e-53 | 0.785141104385769 | 2.14734720172744e-30 | 0.64157835849925 | 2.54142849043557e-30 | 0.640958079453818 |
| PCC | 4.330036022295e-32 | 0.722268424767808 | 5.96002968904156e-26 | 0.667048976051159 | 5.81643537649798e-13 | 0.490610095481804 |
| CER | 6.60423380558407e-47 | 0.868269378566837 | 1.30453000219814e-28 | 0.752296319190064 | 3.14025659654023e-05 | 0.332947121819155 |
| TCX | 8.0870174008431e-30 | 0.762811302973658 | 6.88397223550568e-07 | 0.392272908315802 | 2.79495579489891e-10 | 0.48635471115405 |
| FP | 6.44161059509923e-24 | 0.663164124259951 | 1.01749477882665e-21 | 0.637863737415649 | 3.8197278729168e-05 | 0.303492407864455 |
| IFG | 0.00269066261365761 | 0.574108429087714 | 0.000100676779837395 | 0.699210900366362 | 0.121231103741738 | 0.318097257347921 |
| PG | 1.63449440692193e-44 | 0.809987375634009 | 1.00626584001282e-26 | 0.681307278792946 | 0.717980976128799 | 0.0266564169873239 |
| STG | 1.23736093014031e-11 | 0.65619396445054 | 3.88509109954164e-10 | 0.61766978038487 | 0.0106417495286071 | 0.277356456106067 |
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Relation with AD stages for AASDH |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1140252 | chr4_56345009_- | 0.000903646488696077 | 0.314863896679596 |
| CER | ADediting_1140256 | chr4_56346808_- | 0.000183584395825523 | 0.352420438984852 |
| CER | ADediting_1140259 | chr4_56346840_- | 3.19216533695138e-06 | 0.431134684681144 |
| CER | ADediting_1140263 | chr4_56346981_- | 7.20706612447996e-05 | 0.372447837987605 |
| CER | ADediting_1140267 | chr4_56347667_- | 6.52857154399973e-05 | 0.374490739412659 |
| CER | ADediting_1140268 | chr4_56347684_- | 0.000242478628845153 | 0.346195832778788 |
| CER | ADediting_1140270 | chr4_56347697_- | 2.83076912668547e-06 | 0.433190312305005 |
| CER | ADediting_1140271 | chr4_56347698_- | 2.98603051362272e-05 | 0.390192045976299 |
| CER | ADediting_1140272 | chr4_56347699_- | 0.000734826942096216 | 0.320015505473835 |
| CER | ADediting_1140273 | chr4_56347710_- | 0.000132458094209664 | 0.359562700986094 |
| IFG | ADediting_1140299 | chr4_56348411_- | 0.0353488225216572 | 0.42255826357712 |
| IFG | ADediting_1140307 | chr4_56348437_- | 0.0354713369979928 | 0.422303326441651 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.81049519935963e-07 | 0.470301210410667 |
| TCX | 2.4527831345173e-10 | 0.566527404960109 |
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RelatedDrugs for AASDH |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for AASDH |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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