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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SGPP2 |
 Gene summary |
| Gene information | Gene symbol | SGPP2 | Gene ID | 130367 |
| Gene name | sphingosine-1-phosphate phosphatase 2 | |
| Synonyms | SPP2|SPPase2 | |
| Cytomap | 2q36.1 | |
| Type of gene | protein-coding | |
| Description | sphingosine-1-phosphate phosphatase 2sphingosine 1-phosphate phosphohydrolase 2sphingosine-1-phosphatase 2sphingosine-1-phosphate phosphotase 2 | |
| Modification date | 20200313 | |
| UniProtAcc | Q8IWX5, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| SGPP2 | GO:0006670 | sphingosine metabolic process | 12411432 |
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RNA A-to-I events for SGPP2 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_848496(222426097, +), ADediting_848497(222426107, +), ADediting_848498(222426119, +), ADediting_848499(222426160, +), ADediting_848500(222431314, +), ADediting_848501(222432780, +), ADediting_848502(222432788, +), ADediting_848503(222432802, +), ADediting_848504(222475195, +), ADediting_848505(222475196, +), ADediting_848506(222475199, +), ADediting_848507(222493564, +), ADediting_848508(222493598, +), ADediting_848509(222493601, +), ADediting_848510(222520476, +), ADediting_848511(222520530, +), ADediting_848512(222520609, +), ADediting_848513(222520651, +), ADediting_848514(222527237, +), ADediting_848515(222527250, +), ADediting_848516(222527288, +), ADediting_848517(222528282, +), ADediting_848518(222528289, +), ADediting_848519(222528648, +), ADediting_848520(222528697, +), ADediting_848521(222528710, +), ADediting_848522(222528720, +), ADediting_848523(222528729, +), ADediting_848524(222528806, +), ADediting_848525(222532153, +), ADediting_848526(222532154, +), ADediting_848527(222536515, +), ADediting_848528(222559481, +), ADediting_848529(222559515, +), ADediting_848530(222559517, +), ADediting_848531(222559523, +), ADediting_848532(222559525, +), ADediting_848533(222559526, +), ADediting_848534(222559531, +), ADediting_848535(222559541, +), ADediting_848536(222559542, +), ADediting_848537(222559543, +), ADediting_848538(222559561, +), ADediting_848539(222559562, +), ADediting_848540(222559565, +), ADediting_848541(222559566, +), ADediting_848542(222559579, +), ADediting_848543(222559591, +), ADediting_848544(222559604, +), ADediting_848545(222559625, +), ADediting_848546(222559629, +), ADediting_848547(222559630, +), ADediting_848548(222559638, +), ADediting_848549(222559644, +), ADediting_848550(222559655, +), ADediting_848551(222559694, +), ADediting_848552(222559698, +), ADediting_848553(222559707, +), ADediting_848554(222559716, +), ADediting_848555(222559717, +), ADediting_848556(222559729, +), ADediting_848557(222559738, +), ADediting_848558(222560853, +), ADediting_848559(222560858, +), ADediting_848560(222560861, +), ADediting_848561(222560920, +), ADediting_848562(222560958, +), ADediting_848563(222560990, +), ADediting_848564(222560994, +), ADediting_848565(222560998, +), ADediting_848566(222561001, +), ADediting_848567(222561007, +), ADediting_848568(222561011, +), ADediting_848569(222561025, +), ADediting_848570(222561026, +), ADediting_848571(222561046, +), ADediting_848572(222561145, +), ADediting_1562387(222535275, +), ADediting_1635988(222527252, +), ADediting_1635989(222527285, +), ADediting_1635990(222527290, +), ADediting_1635991(222528214, +), ADediting_1635992(222528219, +), ADediting_1635993(222528220, +), |
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RNA editing positional annotations for SGPP2 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_848496 | chr2_222426097_+ | intronic |
| ADediting_848497 | chr2_222426107_+ | intronic |
| ADediting_848498 | chr2_222426119_+ | intronic |
| ADediting_848499 | chr2_222426160_+ | intronic |
| ADediting_848500 | chr2_222431314_+ | intronic |
| ADediting_848501 | chr2_222432780_+ | intronic |
| ADediting_848502 | chr2_222432788_+ | intronic |
| ADediting_848503 | chr2_222432802_+ | intronic |
| ADediting_848504 | chr2_222475195_+ | intronic |
| ADediting_848505 | chr2_222475196_+ | intronic |
| ADediting_848506 | chr2_222475199_+ | intronic |
| ADediting_848507 | chr2_222493564_+ | intronic |
| ADediting_848508 | chr2_222493598_+ | intronic |
| ADediting_848509 | chr2_222493601_+ | intronic |
| ADediting_848510 | chr2_222520476_+ | intronic |
| ADediting_848511 | chr2_222520530_+ | intronic |
| ADediting_848512 | chr2_222520609_+ | intronic |
| ADediting_848513 | chr2_222520651_+ | intronic |
| ADediting_848514 | chr2_222527237_+ | intronic |
| ADediting_848515 | chr2_222527250_+ | intronic |
| ADediting_848516 | chr2_222527288_+ | intronic |
| ADediting_848517 | chr2_222528282_+ | intronic |
| ADediting_848518 | chr2_222528289_+ | intronic |
| ADediting_848519 | chr2_222528648_+ | intronic |
| ADediting_848520 | chr2_222528697_+ | intronic |
| ADediting_848521 | chr2_222528710_+ | intronic |
| ADediting_848522 | chr2_222528720_+ | intronic |
| ADediting_848523 | chr2_222528729_+ | intronic |
| ADediting_848524 | chr2_222528806_+ | intronic |
| ADediting_848525 | chr2_222532153_+ | intronic |
| ADediting_848526 | chr2_222532154_+ | intronic |
| ADediting_848527 | chr2_222536515_+ | intronic |
| ADediting_848528 | chr2_222559481_+ | UTR3 |
| ADediting_848529 | chr2_222559515_+ | UTR3 |
| ADediting_848530 | chr2_222559517_+ | UTR3 |
| ADediting_848531 | chr2_222559523_+ | UTR3 |
| ADediting_848532 | chr2_222559525_+ | UTR3 |
| ADediting_848533 | chr2_222559526_+ | UTR3 |
| ADediting_848534 | chr2_222559531_+ | UTR3 |
| ADediting_848535 | chr2_222559541_+ | UTR3 |
| ADediting_848536 | chr2_222559542_+ | UTR3 |
| ADediting_848537 | chr2_222559543_+ | UTR3 |
| ADediting_848538 | chr2_222559561_+ | UTR3 |
| ADediting_848539 | chr2_222559562_+ | UTR3 |
| ADediting_848540 | chr2_222559565_+ | UTR3 |
| ADediting_848541 | chr2_222559566_+ | UTR3 |
| ADediting_848542 | chr2_222559579_+ | UTR3 |
| ADediting_848543 | chr2_222559591_+ | UTR3 |
| ADediting_848544 | chr2_222559604_+ | UTR3 |
| ADediting_848545 | chr2_222559625_+ | UTR3 |
| ADediting_848546 | chr2_222559629_+ | UTR3 |
| ADediting_848547 | chr2_222559630_+ | UTR3 |
| ADediting_848548 | chr2_222559638_+ | UTR3 |
| ADediting_848549 | chr2_222559644_+ | UTR3 |
| ADediting_848550 | chr2_222559655_+ | UTR3 |
| ADediting_848551 | chr2_222559694_+ | UTR3 |
| ADediting_848552 | chr2_222559698_+ | UTR3 |
| ADediting_848553 | chr2_222559707_+ | UTR3 |
| ADediting_848554 | chr2_222559716_+ | UTR3 |
| ADediting_848555 | chr2_222559717_+ | UTR3 |
| ADediting_848556 | chr2_222559729_+ | UTR3 |
| ADediting_848557 | chr2_222559738_+ | UTR3 |
| ADediting_848558 | chr2_222560853_+ | UTR3 |
| ADediting_848559 | chr2_222560858_+ | UTR3 |
| ADediting_848560 | chr2_222560861_+ | UTR3 |
| ADediting_848561 | chr2_222560920_+ | UTR3 |
| ADediting_848562 | chr2_222560958_+ | UTR3 |
| ADediting_848563 | chr2_222560990_+ | UTR3 |
| ADediting_848564 | chr2_222560994_+ | UTR3 |
| ADediting_848565 | chr2_222560998_+ | UTR3 |
| ADediting_848566 | chr2_222561001_+ | UTR3 |
| ADediting_848567 | chr2_222561007_+ | UTR3 |
| ADediting_848568 | chr2_222561011_+ | UTR3 |
| ADediting_848569 | chr2_222561025_+ | UTR3 |
| ADediting_848570 | chr2_222561026_+ | UTR3 |
| ADediting_848571 | chr2_222561046_+ | UTR3 |
| ADediting_848572 | chr2_222561145_+ | UTR3 |
| ADediting_1562387 | chr2_222535275_+ | intronic |
| ADediting_1635988 | chr2_222527252_+ | intronic |
| ADediting_1635989 | chr2_222527285_+ | intronic |
| ADediting_1635990 | chr2_222527290_+ | intronic |
| ADediting_1635991 | chr2_222528214_+ | intronic |
| ADediting_1635992 | chr2_222528219_+ | intronic |
| ADediting_1635993 | chr2_222528220_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_848496 | chr2_222426097_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848497 | chr2_222426107_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848498 | chr2_222426119_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848499 | chr2_222426160_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848500 | chr2_222431314_+ | SINE | Alu | Name=AluSz |
| ADediting_848501 | chr2_222432780_+ | SINE | Alu | Name=AluSp |
| ADediting_848502 | chr2_222432788_+ | SINE | Alu | Name=AluSp |
| ADediting_848503 | chr2_222432802_+ | SINE | Alu | Name=AluSp |
| ADediting_848504 | chr2_222475195_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848505 | chr2_222475196_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848506 | chr2_222475199_+ | SINE | Alu | Name=AluSx3 |
| ADediting_848507 | chr2_222493564_+ | SINE | Alu | Name=AluJo |
| ADediting_848508 | chr2_222493598_+ | SINE | Alu | Name=AluJo |
| ADediting_848509 | chr2_222493601_+ | SINE | Alu | Name=AluJo |
| ADediting_848510 | chr2_222520476_+ | SINE | Alu | Name=AluSx1 |
| ADediting_848511 | chr2_222520530_+ | SINE | Alu | Name=AluSx1 |
| ADediting_848512 | chr2_222520609_+ | SINE | Alu | Name=AluSx1 |
| ADediting_848513 | chr2_222520651_+ | SINE | Alu | Name=AluSx1 |
| ADediting_848514 | chr2_222527237_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_848515 | chr2_222527250_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_848516 | chr2_222527288_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_848517 | chr2_222528282_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_848518 | chr2_222528289_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_848519 | chr2_222528648_+ | SINE | Alu | Name=AluJo |
| ADediting_848520 | chr2_222528697_+ | SINE | Alu | Name=AluJo |
| ADediting_848521 | chr2_222528710_+ | SINE | Alu | Name=AluJo |
| ADediting_848522 | chr2_222528720_+ | SINE | Alu | Name=AluJo |
| ADediting_848523 | chr2_222528729_+ | SINE | Alu | Name=AluJo |
| ADediting_848524 | chr2_222528806_+ | SINE | Alu | Name=AluJo |
| ADediting_848525 | chr2_222532153_+ | SINE | Alu | Name=AluSp |
| ADediting_848526 | chr2_222532154_+ | SINE | Alu | Name=AluSp |
| ADediting_848527 | chr2_222536515_+ | SINE | Alu | Name=AluSx1 |
| ADediting_848528 | chr2_222559481_+ | SINE | Alu | Name=AluJb |
| ADediting_848529 | chr2_222559515_+ | SINE | Alu | Name=AluJb |
| ADediting_848530 | chr2_222559517_+ | SINE | Alu | Name=AluJb |
| ADediting_848531 | chr2_222559523_+ | SINE | Alu | Name=AluJb |
| ADediting_848532 | chr2_222559525_+ | SINE | Alu | Name=AluJb |
| ADediting_848533 | chr2_222559526_+ | SINE | Alu | Name=AluJb |
| ADediting_848534 | chr2_222559531_+ | SINE | Alu | Name=AluJb |
| ADediting_848535 | chr2_222559541_+ | SINE | Alu | Name=AluJb |
| ADediting_848536 | chr2_222559542_+ | SINE | Alu | Name=AluJb |
| ADediting_848537 | chr2_222559543_+ | SINE | Alu | Name=AluJb |
| ADediting_848538 | chr2_222559561_+ | SINE | Alu | Name=AluJb |
| ADediting_848539 | chr2_222559562_+ | SINE | Alu | Name=AluJb |
| ADediting_848540 | chr2_222559565_+ | SINE | Alu | Name=AluJb |
| ADediting_848541 | chr2_222559566_+ | SINE | Alu | Name=AluJb |
| ADediting_848542 | chr2_222559579_+ | SINE | Alu | Name=AluJb |
| ADediting_848543 | chr2_222559591_+ | SINE | Alu | Name=AluJb |
| ADediting_848544 | chr2_222559604_+ | SINE | Alu | Name=AluJb |
| ADediting_848545 | chr2_222559625_+ | SINE | Alu | Name=AluJb |
| ADediting_848546 | chr2_222559629_+ | SINE | Alu | Name=AluJb |
| ADediting_848547 | chr2_222559630_+ | SINE | Alu | Name=AluJb |
| ADediting_848548 | chr2_222559638_+ | SINE | Alu | Name=AluJb |
| ADediting_848549 | chr2_222559644_+ | SINE | Alu | Name=AluJb |
| ADediting_848550 | chr2_222559655_+ | SINE | Alu | Name=AluJb |
| ADediting_848551 | chr2_222559694_+ | SINE | Alu | Name=AluJb |
| ADediting_848552 | chr2_222559698_+ | SINE | Alu | Name=AluJb |
| ADediting_848553 | chr2_222559707_+ | SINE | Alu | Name=AluJb |
| ADediting_848554 | chr2_222559716_+ | SINE | Alu | Name=AluJb |
| ADediting_848555 | chr2_222559717_+ | SINE | Alu | Name=AluJb |
| ADediting_848556 | chr2_222559729_+ | SINE | Alu | Name=AluJb |
| ADediting_848557 | chr2_222559738_+ | SINE | Alu | Name=AluJb |
| ADediting_848558 | chr2_222560853_+ | SINE | Alu | Name=AluY |
| ADediting_848559 | chr2_222560858_+ | SINE | Alu | Name=AluY |
| ADediting_848560 | chr2_222560861_+ | SINE | Alu | Name=AluY |
| ADediting_848561 | chr2_222560920_+ | SINE | Alu | Name=AluY |
| ADediting_848562 | chr2_222560958_+ | SINE | Alu | Name=AluY |
| ADediting_848563 | chr2_222560990_+ | SINE | Alu | Name=AluY |
| ADediting_848564 | chr2_222560994_+ | SINE | Alu | Name=AluY |
| ADediting_848565 | chr2_222560998_+ | SINE | Alu | Name=AluY |
| ADediting_848566 | chr2_222561001_+ | SINE | Alu | Name=AluY |
| ADediting_848567 | chr2_222561007_+ | SINE | Alu | Name=AluY |
| ADediting_848568 | chr2_222561011_+ | SINE | Alu | Name=AluY |
| ADediting_848569 | chr2_222561025_+ | SINE | Alu | Name=AluY |
| ADediting_848570 | chr2_222561026_+ | SINE | Alu | Name=AluY |
| ADediting_848571 | chr2_222561046_+ | SINE | Alu | Name=AluY |
| ADediting_1562387 | chr2_222535275_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1635988 | chr2_222527252_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1635989 | chr2_222527285_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1635990 | chr2_222527290_+ | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1635991 | chr2_222528214_+ | LINE | L1 | Name=L1MB3 |
| ADediting_1635992 | chr2_222528219_+ | LINE | L1 | Name=L1MB3 |
| ADediting_1635993 | chr2_222528220_+ | LINE | L1 | Name=L1MB3 |
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RNA A-to-I editing events in the alternative splicing sites for SGPP2 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SGPP2 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for SGPP2 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for SGPP2 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_848528 | chr2_222559481_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4433b-5p | chr2 | 222559478 | 222559484 | 7mer-m8 | 222559465 | 222559485 | 140 | -10.81 |
| ADediting_848533 | chr2_222559526_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3672 | chr2 | 222559524 | 222559530 | 7mer-m8 | 222559504 | 222559531 | 159 | -17.21 |
| ADediting_848533 | chr2_222559526_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6529-3p | chr2 | 222559519 | 222559525 | 7mer-m8 | 222559504 | 222559526 | 148 | -14.65 |
| ADediting_848533 | chr2_222559526_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6864-3p | chr2 | 222559524 | 222559530 | 7mer-m8 | 222559512 | 222559531 | 143 | -11.59 |
| ADediting_848533 | chr2_222559526_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6889-3p | chr2 | 222559519 | 222559525 | 7mer-m8 | 222559507 | 222559526 | 147 | -15.75 |
| ADediting_848533 | chr2_222559526_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-873-3p | chr2 | 222559523 | 222559530 | 8mer-1a | 222559510 | 222559530 | 141 | -14.94 |
| ADediting_848534 | chr2_222559531_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4537 | chr2 | 222559528 | 222559535 | 8mer-1a | 222559513 | 222559535 | 151 | -25.13 |
| ADediting_848536 | chr2_222559542_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-17-3p | chr2 | 222559535 | 222559542 | 8mer-1a | 222559520 | 222559542 | 153 | -18.81 |
| ADediting_848536 | chr2_222559542_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5007-5p | chr2 | 222559540 | 222559546 | 7mer-m8 | 222559520 | 222559547 | 155 | -20.17 |
| ADediting_848537 | chr2_222559543_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4327 | chr2 | 222559537 | 222559543 | 7mer-m8 | 222559525 | 222559544 | 147 | -18.29 |
| ADediting_848539 | chr2_222559562_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6751-3p | chr2 | 222559555 | 222559561 | 7mer-m8 | 222559542 | 222559562 | 141 | -14.54 |
| ADediting_848541 | chr2_222559566_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1288-3p | chr2 | 222559562 | 222559568 | 7mer-m8 | 222559549 | 222559569 | 151 | -22.89 |
| ADediting_848541 | chr2_222559566_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3169 | chr2 | 222559563 | 222559569 | 7mer-m8 | 222559550 | 222559570 | 150 | -19.71 |
| ADediting_848542 | chr2_222559579_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4645-5p | chr2 | 222559572 | 222559578 | 7mer-m8 | 222559561 | 222559579 | 147 | -16.94 |
| ADediting_848543 | chr2_222559591_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4691-3p | chr2 | 222559588 | 222559594 | 7mer-m8 | 222559573 | 222559595 | 141 | -20.71 |
| ADediting_848544 | chr2_222559604_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-139-5p | chr2 | 222559597 | 222559603 | 7mer-m8 | 222559582 | 222559604 | 151 | -20.59 |
| ADediting_848544 | chr2_222559604_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4633-5p | chr2 | 222559602 | 222559608 | 7mer-m8 | 222559586 | 222559609 | 148 | -20.66 |
| ADediting_848546 | chr2_222559629_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1207-3p | chr2 | 222559622 | 222559629 | 8mer-1a | 222559613 | 222559629 | 145 | -15.92 |
| ADediting_848546 | chr2_222559629_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-34a-3p | chr2 | 222559625 | 222559631 | 7mer-m8 | 222559611 | 222559632 | 143 | -11.66 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4661-5p | chr2 | 222559624 | 222559630 | 7mer-m8 | 222559610 | 222559631 | 152 | -13.85 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548ae-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559615 | 222559635 | 141 | -10.48 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548ah-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559612 | 222559635 | 144 | -11.4 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548aj-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559615 | 222559635 | 141 | -8.37 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548am-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559612 | 222559635 | 144 | -11.13 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548aq-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559614 | 222559635 | 141 | -11.2 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548j-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559615 | 222559635 | 141 | -10.48 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548x-3p | chr2 | 222559628 | 222559634 | 7mer-m8 | 222559616 | 222559635 | 141 | -8.37 |
| ADediting_848547 | chr2_222559630_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-7844-5p | chr2 | 222559626 | 222559632 | 7mer-m8 | 222559610 | 222559633 | 155 | -17.72 |
| ADediting_848549 | chr2_222559644_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-340-3p | chr2 | 222559638 | 222559644 | 7mer-m8 | 222559624 | 222559645 | 141 | -18.17 |
| ADediting_848549 | chr2_222559644_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6827-3p | chr2 | 222559638 | 222559644 | 7mer-m8 | 222559625 | 222559645 | 147 | -16.55 |
| ADediting_848551 | chr2_222559694_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1255b-2-3p | chr2 | 222559688 | 222559694 | 7mer-m8 | 222559674 | 222559695 | 140 | -14.47 |
| ADediting_848551 | chr2_222559694_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4776-5p | chr2 | 222559691 | 222559697 | 7mer-m8 | 222559676 | 222559698 | 147 | -24.15 |
| ADediting_848551 | chr2_222559694_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4800-5p | chr2 | 222559692 | 222559698 | 7mer-m8 | 222559679 | 222559699 | 147 | -21.97 |
| ADediting_848552 | chr2_222559698_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1228-5p | chr2 | 222559695 | 222559701 | 7mer-m8 | 222559682 | 222559702 | 141 | -22.98 |
| ADediting_848554 | chr2_222559716_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-326 | chr2 | 222559711 | 222559717 | 7mer-m8 | 222559699 | 222559718 | 140 | -13.25 |
| ADediting_848554 | chr2_222559716_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-330-5p | chr2 | 222559711 | 222559717 | 7mer-m8 | 222559695 | 222559718 | 141 | -19.11 |
| ADediting_848554 | chr2_222559716_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4314 | chr2 | 222559710 | 222559716 | 7mer-m8 | 222559699 | 222559717 | 141 | -20.85 |
| ADediting_848554 | chr2_222559716_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-514a-5p | chr2 | 222559712 | 222559718 | 7mer-m8 | 222559696 | 222559719 | 150 | -18.62 |
| ADediting_848555 | chr2_222559717_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3189-3p | chr2 | 222559711 | 222559717 | 7mer-m8 | 222559695 | 222559718 | 157 | -25.36 |
| ADediting_848555 | chr2_222559717_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6813-3p | chr2 | 222559712 | 222559718 | 7mer-m8 | 222559699 | 222559719 | 140 | -10.68 |
| ADediting_848557 | chr2_222559738_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4641 | chr2 | 222559733 | 222559739 | 7mer-m8 | 222559716 | 222559740 | 164 | -22.3 |
| ADediting_848557 | chr2_222559738_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-663b | chr2 | 222559736 | 222559742 | 7mer-m8 | 222559721 | 222559743 | 147 | -25.64 |
| ADediting_848557 | chr2_222559738_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6872-3p | chr2 | 222559731 | 222559737 | 7mer-m8 | 222559718 | 222559738 | 147 | -25.42 |
| ADediting_848558 | chr2_222560853_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-8052 | chr2 | 222560851 | 222560857 | 7mer-1a | 222560839 | 222560857 | 148 | -29.06 |
| ADediting_848559 | chr2_222560858_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-371a-3p | chr2 | 222560856 | 222560862 | 7mer-m8 | 222560841 | 222560863 | 144 | -15.05 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-518a-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560844 | 222560865 | 145 | -17.15 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-518b | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560845 | 222560865 | 146 | -21.79 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-518c-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560844 | 222560865 | 146 | -18.08 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-518d-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560845 | 222560865 | 145 | -17.84 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-518e-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560843 | 222560864 | 144 | -14.43 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-518f-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560845 | 222560865 | 145 | -17.48 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-526a-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560845 | 222560865 | 146 | -17.71 |
| ADediting_848564 | chr2_222560994_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1207-3p | chr2 | 222560987 | 222560993 | 7mer-m8 | 222560976 | 222560994 | 145 | -13.53 |
| ADediting_848564 | chr2_222560994_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-646 | chr2 | 222560989 | 222560995 | 7mer-m8 | 222560977 | 222560996 | 148 | -21.05 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-125a-5p | chr2 | 222560994 | 222561000 | 7mer-m8 | 222560978 | 222561001 | 142 | -17.93 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-125b-5p | chr2 | 222560994 | 222561000 | 7mer-m8 | 222560980 | 222561001 | 141 | -16.47 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3943 | chr2 | 222560998 | 222561004 | 7mer-m8 | 222560985 | 222561005 | 150 | -22.11 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4313 | chr2 | 222560997 | 222561003 | 7mer-m8 | 222560985 | 222561004 | 146 | -21.1 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4319 | chr2 | 222560994 | 222561000 | 7mer-m8 | 222560985 | 222561001 | 142 | -17.68 |
| ADediting_848567 | chr2_222561007_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1913 | chr2 | 222561005 | 222561011 | 7mer-m8 | 222560993 | 222561012 | 148 | -25.01 |
| ADediting_848567 | chr2_222561007_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6849-3p | chr2 | 222561000 | 222561006 | 7mer-m8 | 222560985 | 222561007 | 141 | -14.9 |
| ADediting_848570 | chr2_222561026_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4284 | chr2 | 222561021 | 222561027 | 7mer-m8 | 222561011 | 222561028 | 148 | -20.34 |
| ADediting_848570 | chr2_222561026_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4437 | chr2 | 222561022 | 222561028 | 7mer-m8 | 222561009 | 222561029 | 145 | -18.43 |
| ADediting_848572 | chr2_222561145_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-10527-5p | chr2 | 222561141 | 222561148 | 8mer-1a | 222561126 | 222561148 | 157 | -14.89 |
| ADediting_848572 | chr2_222561145_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4503 | chr2 | 222561143 | 222561150 | 8mer-1a | 222561130 | 222561150 | 165 | -14.05 |
| ADediting_848572 | chr2_222561145_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-548p | chr2 | 222561140 | 222561146 | 7mer-m8 | 222561125 | 222561147 | 160 | -11.55 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_848528 | chr2_222559481_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-371a-5p | chr2 | 222559475 | 222559482 | 8mer-1a | 222559462 | 222559482 | 141 | -10.69 |
| ADediting_848529 | chr2_222559515_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-2054 | chr2 | 222559510 | 222559516 | 7mer-m8 | 222559495 | 222559517 | 146 | -11.83 |
| ADediting_848529 | chr2_222559515_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-655-3p | chr2 | 222559508 | 222559514 | 7mer-m8 | 222559491 | 222559515 | 147 | -9.12 |
| ADediting_848530 | chr2_222559517_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-2054 | chr2 | 222559510 | 222559516 | 7mer-m8 | 222559495 | 222559517 | 146 | -11.83 |
| ADediting_848530 | chr2_222559517_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4252 | chr2 | 222559515 | 222559522 | 8mer-1a | 222559502 | 222559522 | 153 | -21.42 |
| ADediting_848531 | chr2_222559523_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1227-3p | chr2 | 222559517 | 222559524 | 8mer-1a | 222559505 | 222559524 | 140 | -13.75 |
| ADediting_848532 | chr2_222559525_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5186 | chr2 | 222559523 | 222559530 | 8mer-1a | 222559505 | 222559530 | 143 | -15.04 |
| ADediting_848533 | chr2_222559526_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5186 | chr2 | 222559523 | 222559530 | 8mer-1a | 222559505 | 222559530 | 143 | -15.04 |
| ADediting_848534 | chr2_222559531_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3160-3p | chr2 | 222559528 | 222559535 | 8mer-1a | 222559514 | 222559535 | 152 | -17.9 |
| ADediting_848535 | chr2_222559541_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6516-5p | chr2 | 222559535 | 222559542 | 8mer-1a | 222559523 | 222559542 | 148 | -15 |
| ADediting_848536 | chr2_222559542_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6516-5p | chr2 | 222559535 | 222559542 | 8mer-1a | 222559523 | 222559542 | 148 | -15 |
| ADediting_848542 | chr2_222559579_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3934-3p | chr2 | 222559574 | 222559580 | 7mer-m8 | 222559560 | 222559581 | 147 | -18.74 |
| ADediting_848543 | chr2_222559591_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5690 | chr2 | 222559588 | 222559594 | 7mer-m8 | 222559575 | 222559595 | 145 | -16.75 |
| ADediting_848544 | chr2_222559604_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-600 | chr2 | 222559598 | 222559604 | 7mer-m8 | 222559582 | 222559605 | 143 | -15.65 |
| ADediting_848545 | chr2_222559625_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1285-3p | chr2 | 222559619 | 222559625 | 7mer-m8 | 222559606 | 222559626 | 150 | -18.4 |
| ADediting_848545 | chr2_222559625_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3187-5p | chr2 | 222559619 | 222559625 | 7mer-m8 | 222559603 | 222559626 | 155 | -24.73 |
| ADediting_848545 | chr2_222559625_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-612 | chr2 | 222559619 | 222559625 | 7mer-m8 | 222559599 | 222559626 | 152 | -25.32 |
| ADediting_848545 | chr2_222559625_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6860 | chr2 | 222559619 | 222559625 | 7mer-m8 | 222559606 | 222559626 | 148 | -22.42 |
| ADediting_848548 | chr2_222559638_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1283 | chr2 | 222559632 | 222559639 | 8mer-1a | 222559618 | 222559639 | 151 | -14.52 |
| ADediting_848548 | chr2_222559638_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4684-5p | chr2 | 222559635 | 222559641 | 7mer-m8 | 222559621 | 222559642 | 143 | -9.55 |
| ADediting_848548 | chr2_222559638_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-519a-2-5p | chr2 | 222559634 | 222559641 | 8mer-1a | 222559621 | 222559641 | 154 | -15.04 |
| ADediting_848548 | chr2_222559638_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520b-5p | chr2 | 222559634 | 222559641 | 8mer-1a | 222559621 | 222559641 | 154 | -15.04 |
| ADediting_848548 | chr2_222559638_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-593-3p | chr2 | 222559637 | 222559643 | 7mer-1a | 222559625 | 222559643 | 140 | -16.44 |
| ADediting_848549 | chr2_222559644_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-10a-5p | chr2 | 222559641 | 222559647 | 7mer-m8 | 222559626 | 222559648 | 149 | -13.87 |
| ADediting_848549 | chr2_222559644_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-10b-5p | chr2 | 222559641 | 222559647 | 7mer-m8 | 222559625 | 222559648 | 148 | -14.33 |
| ADediting_848549 | chr2_222559644_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5699-3p | chr2 | 222559639 | 222559645 | 7mer-m8 | 222559625 | 222559646 | 148 | -19.33 |
| ADediting_848549 | chr2_222559644_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6818-3p | chr2 | 222559637 | 222559643 | 7mer-m8 | 222559623 | 222559644 | 140 | -11.1 |
| ADediting_848550 | chr2_222559655_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4531 | chr2 | 222559648 | 222559654 | 7mer-m8 | 222559639 | 222559655 | 151 | -18.2 |
| ADediting_848552 | chr2_222559698_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3165 | chr2 | 222559693 | 222559699 | 7mer-m8 | 222559681 | 222559700 | 148 | -17.54 |
| ADediting_848552 | chr2_222559698_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6745 | chr2 | 222559694 | 222559701 | 8mer-1a | 222559678 | 222559701 | 146 | -23.23 |
| ADediting_848552 | chr2_222559698_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6748-5p | chr2 | 222559696 | 222559702 | 7mer-m8 | 222559684 | 222559703 | 149 | -18.62 |
| ADediting_848553 | chr2_222559707_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4478 | chr2 | 222559704 | 222559710 | 7mer-m8 | 222559695 | 222559711 | 154 | -23.41 |
| ADediting_848553 | chr2_222559707_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-485-5p | chr2 | 222559705 | 222559711 | 7mer-m8 | 222559691 | 222559712 | 149 | -16.76 |
| ADediting_848553 | chr2_222559707_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-7160-5p | chr2 | 222559702 | 222559708 | 7mer-m8 | 222559692 | 222559709 | 148 | -19.34 |
| ADediting_848553 | chr2_222559707_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-7162-3p | chr2 | 222559701 | 222559707 | 7mer-m8 | 222559690 | 222559708 | 150 | -18.37 |
| ADediting_848554 | chr2_222559716_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-887-5p | chr2 | 222559709 | 222559716 | 8mer-1a | 222559697 | 222559716 | 143 | -13.53 |
| ADediting_848557 | chr2_222559738_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6847-3p | chr2 | 222559733 | 222559739 | 7mer-m8 | 222559718 | 222559740 | 153 | -20.81 |
| ADediting_848558 | chr2_222560853_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-10399-5p | chr2 | 222560847 | 222560853 | 7mer-m8 | 222560833 | 222560854 | 144 | -11.88 |
| ADediting_848558 | chr2_222560853_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5089-5p | chr2 | 222560851 | 222560857 | 7mer-m8 | 222560839 | 222560858 | 146 | -13.24 |
| ADediting_848559 | chr2_222560858_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5089-5p | chr2 | 222560851 | 222560857 | 7mer-m8 | 222560839 | 222560858 | 146 | -13.24 |
| ADediting_848559 | chr2_222560858_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-512-3p | chr2 | 222560856 | 222560862 | 7mer-m8 | 222560842 | 222560863 | 149 | -15 |
| ADediting_848559 | chr2_222560858_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6506-5p | chr2 | 222560852 | 222560858 | 7mer-m8 | 222560837 | 222560859 | 144 | -16.21 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-302a-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560843 | 222560864 | 143 | -11.02 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-302b-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560842 | 222560864 | 141 | -9.54 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-302c-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560844 | 222560864 | 145 | -11.96 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-302d-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560837 | 222560864 | 148 | -13.74 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-302e | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560848 | 222560864 | 141 | -8.62 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-372-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560837 | 222560864 | 155 | -21.14 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-512-3p | chr2 | 222560856 | 222560862 | 7mer-m8 | 222560842 | 222560863 | 149 | -15 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-519d-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560845 | 222560865 | 146 | -14.53 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520a-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560843 | 222560864 | 140 | -11.03 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520b-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560845 | 222560864 | 141 | -16.52 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520c-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560844 | 222560864 | 146 | -16.52 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520d-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560843 | 222560864 | 140 | -13.09 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520e-3p | chr2 | 222560857 | 222560863 | 7mer-m8 | 222560844 | 222560864 | 140 | -13.32 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520g-3p | chr2 | 222560859 | 222560865 | 7mer-m8 | 222560844 | 222560866 | 151 | -15.87 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-520h | chr2 | 222560859 | 222560865 | 7mer-m8 | 222560845 | 222560866 | 150 | -15.08 |
| ADediting_848560 | chr2_222560861_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-526b-3p | chr2 | 222560858 | 222560864 | 7mer-m8 | 222560845 | 222560865 | 146 | -16.66 |
| ADediting_848561 | chr2_222560920_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-3152-3p | chr2 | 222560916 | 222560922 | 7mer-m8 | 222560903 | 222560923 | 145 | -18.08 |
| ADediting_848562 | chr2_222560958_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4735-5p | chr2 | 222560952 | 222560958 | 7mer-m8 | 222560938 | 222560959 | 140 | -6.88 |
| ADediting_848565 | chr2_222560998_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1200 | chr2 | 222560994 | 222561000 | 7mer-m8 | 222560980 | 222561001 | 141 | -18.61 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1200 | chr2 | 222560994 | 222561000 | 7mer-m8 | 222560980 | 222561001 | 141 | -18.61 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6791-3p | chr2 | 222560997 | 222561003 | 7mer-m8 | 222560984 | 222561004 | 154 | -17.64 |
| ADediting_848566 | chr2_222561001_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6829-3p | chr2 | 222560997 | 222561003 | 7mer-m8 | 222560985 | 222561004 | 155 | -20.58 |
| ADediting_848568 | chr2_222561011_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-1976 | chr2 | 222561008 | 222561015 | 8mer-1a | 222560995 | 222561015 | 153 | -25.04 |
| ADediting_848568 | chr2_222561011_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-6747-3p | chr2 | 222561006 | 222561013 | 8mer-1a | 222560991 | 222561013 | 149 | -23.42 |
| ADediting_848571 | chr2_222561046_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-2276-3p | chr2 | 222561040 | 222561046 | 7mer-m8 | 222561026 | 222561047 | 144 | -18.76 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-589-3p | chr2 | 222559491 | 222559497 | 7mer-m8 | 222559475 | 222559498 | 159 | -19.35 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-589-3p | chr2 | 222561798 | 222561804 | 7mer-m8 | 222561779 | 222561805 | 146 | -17.26 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-589-3p | chr2 | 222561906 | 222561912 | 7mer-m8 | 222561888 | 222561913 | 159 | -18.27 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4775 | chr2 | 222560726 | 222560732 | 7mer-m8 | 222560712 | 222560733 | 160 | -11.06 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4775 | chr2 | 222562574 | 222562580 | 7mer-m8 | 222562560 | 222562581 | 145 | -4.44 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5585-3p | chr2 | 222561882 | 222561888 | 7mer-m8 | 222561866 | 222561889 | 154 | -20.24 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-5581-3p | chr2 | 222559353 | 222559359 | 7mer-m8 | 222559340 | 222559360 | 142 | -12.63 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4477b | chr2 | 222560686 | 222560693 | 8mer-1a | 222560669 | 222560693 | 149 | -7.45 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4477b | chr2 | 222560686 | 222560693 | 8mer-1a | 222560669 | 222560693 | 149 | -7.45 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-381-3p | chr2 | 222561449 | 222561455 | 7mer-m8 | 222561434 | 222561456 | 153 | -14.97 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-381-3p | chr2 | 222561449 | 222561455 | 7mer-m8 | 222561434 | 222561456 | 153 | -14.97 |
| ADediting_496066 | chr15_66496985_- | ENSG00000163082.10 | ENST00000321276.8 | SGPP2-201 | hsa-miR-4512 | chr2 | 222560102 | 222560108 | 7mer-m8 | 222560087 | 222560109 | 146 | -20.65 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for SGPP2 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000321276.8 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_848528 | ENST00000321276.8 | chr2_222559481_+ | 1843 | -1785.50 | -1786.40 | -1854.40 |
| ADediting_848529 | ENST00000321276.8 | chr2_222559515_+ | 1877 | -1791.70 | -1786.40 | -1854.40 |
| ADediting_848530 | ENST00000321276.8 | chr2_222559517_+ | 1879 | -1785.70 | -1786.40 | -1854.40 |
| ADediting_848531 | ENST00000321276.8 | chr2_222559523_+ | 1885 | -1791.80 | -1786.40 | -1854.40 |
| ADediting_848532 | ENST00000321276.8 | chr2_222559525_+ | 1887 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848533 | ENST00000321276.8 | chr2_222559526_+ | 1888 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848534 | ENST00000321276.8 | chr2_222559531_+ | 1893 | -1792.60 | -1786.40 | -1854.40 |
| ADediting_848535 | ENST00000321276.8 | chr2_222559541_+ | 1903 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848536 | ENST00000321276.8 | chr2_222559542_+ | 1904 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848537 | ENST00000321276.8 | chr2_222559543_+ | 1905 | -1793.10 | -1786.40 | -1854.40 |
| ADediting_848538 | ENST00000321276.8 | chr2_222559561_+ | 1923 | -1787.10 | -1786.40 | -1854.40 |
| ADediting_848539 | ENST00000321276.8 | chr2_222559562_+ | 1924 | -1789.00 | -1786.40 | -1854.40 |
| ADediting_848540 | ENST00000321276.8 | chr2_222559565_+ | 1927 | -1789.00 | -1786.40 | -1854.40 |
| ADediting_848541 | ENST00000321276.8 | chr2_222559566_+ | 1928 | -1786.70 | -1786.40 | -1854.40 |
| ADediting_848542 | ENST00000321276.8 | chr2_222559579_+ | 1941 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848543 | ENST00000321276.8 | chr2_222559591_+ | 1953 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848544 | ENST00000321276.8 | chr2_222559604_+ | 1966 | -1793.00 | -1786.40 | -1854.40 |
| ADediting_848545 | ENST00000321276.8 | chr2_222559625_+ | 1987 | -1792.50 | -1786.40 | -1854.40 |
| ADediting_848546 | ENST00000321276.8 | chr2_222559629_+ | 1991 | -1786.50 | -1786.40 | -1854.40 |
| ADediting_848547 | ENST00000321276.8 | chr2_222559630_+ | 1992 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848548 | ENST00000321276.8 | chr2_222559638_+ | 2000 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848549 | ENST00000321276.8 | chr2_222559644_+ | 2006 | -1792.60 | -1786.40 | -1854.40 |
| ADediting_848550 | ENST00000321276.8 | chr2_222559655_+ | 2017 | -1792.20 | -1786.40 | -1854.40 |
| ADediting_848551 | ENST00000321276.8 | chr2_222559694_+ | 2056 | -1793.10 | -1786.40 | -1854.40 |
| ADediting_848552 | ENST00000321276.8 | chr2_222559698_+ | 2060 | -1791.80 | -1786.40 | -1854.40 |
| ADediting_848553 | ENST00000321276.8 | chr2_222559707_+ | 2069 | -1792.60 | -1786.40 | -1854.40 |
| ADediting_848554 | ENST00000321276.8 | chr2_222559716_+ | 2078 | -1786.50 | -1786.40 | -1854.40 |
| ADediting_848555 | ENST00000321276.8 | chr2_222559717_+ | 2079 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848556 | ENST00000321276.8 | chr2_222559729_+ | 2091 | -1783.40 | -1786.40 | -1854.40 |
| ADediting_848557 | ENST00000321276.8 | chr2_222559738_+ | 2100 | -1785.50 | -1786.40 | -1854.40 |
| ADediting_848558 | ENST00000321276.8 | chr2_222560853_+ | 3215 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848559 | ENST00000321276.8 | chr2_222560858_+ | 3220 | -1785.70 | -1786.40 | -1854.40 |
| ADediting_848560 | ENST00000321276.8 | chr2_222560861_+ | 3223 | -1786.00 | -1786.40 | -1854.40 |
| ADediting_848561 | ENST00000321276.8 | chr2_222560920_+ | 3282 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848562 | ENST00000321276.8 | chr2_222560958_+ | 3320 | -1786.10 | -1786.40 | -1854.40 |
| ADediting_848563 | ENST00000321276.8 | chr2_222560990_+ | 3352 | -1785.70 | -1786.40 | -1854.40 |
| ADediting_848564 | ENST00000321276.8 | chr2_222560994_+ | 3356 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848565 | ENST00000321276.8 | chr2_222560998_+ | 3360 | -1785.70 | -1786.40 | -1854.40 |
| ADediting_848566 | ENST00000321276.8 | chr2_222561001_+ | 3363 | -1787.70 | -1786.40 | -1854.40 |
| ADediting_848567 | ENST00000321276.8 | chr2_222561007_+ | 3369 | -1786.40 | -1786.40 | -1854.40 |
| ADediting_848568 | ENST00000321276.8 | chr2_222561011_+ | 3373 | -1785.70 | -1786.40 | -1854.40 |
| ADediting_848569 | ENST00000321276.8 | chr2_222561025_+ | 3387 | -1785.50 | -1786.40 | -1854.40 |
| ADediting_848570 | ENST00000321276.8 | chr2_222561026_+ | 3388 | -1793.10 | -1786.40 | -1854.40 |
| ADediting_848571 | ENST00000321276.8 | chr2_222561046_+ | 3408 | -1785.70 | -1786.40 | -1854.40 |
| ADediting_848572 | ENST00000321276.8 | chr2_222561145_+ | 3507 | -1791.20 | -1786.40 | -1854.40 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for SGPP2 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_848529 | chr2_222559515_+ | 5.03274889490257e-12 | 0.525508302717849 | 4.40297113696282e-16 | 0.600761685683674 | 0.000336753407108164 | 0.288884522192268 |
| TCX | ADediting_848529 | chr2_222559515_+ | 1.57740431267926e-06 | 0.38035948765973 | 6.61146137771713e-08 | 0.423621636896767 | 0.367494664440425 | -0.0740993815285059 |
| CER | ADediting_848531 | chr2_222559523_+ | 2.10551830082541e-10 | 0.489284252641487 | 8.31505650805623e-19 | 0.642135397445505 | 0.00467524153390121 | 0.229777715831995 |
| TCX | ADediting_848531 | chr2_222559523_+ | 0.000216141254202065 | 0.297665544707102 | 7.03675700459166e-07 | 0.391963464774541 | 0.173723078030166 | -0.111657524827239 |
| CER | ADediting_848533 | chr2_222559526_+ | 0.000697674677785649 | 0.273813012011229 | 3.50230953707783e-08 | 0.431599953417726 | 0.256783908600707 | 0.0931706331342037 |
| CER | ADediting_848534 | chr2_222559531_+ | 4.63967232906894e-09 | 0.45569570827182 | 2.09799076992326e-16 | 0.605981282963951 | 0.00342764186383995 | 0.237508293394424 |
| TCX | ADediting_848534 | chr2_222559531_+ | 0.00904165818702854 | 0.212482267232587 | 7.76679283940419e-05 | 0.316931053326193 | 0.398032430816344 | -0.0695033571099499 |
| CER | ADediting_848537 | chr2_222559543_+ | 4.91493042132516e-10 | 0.480432972020532 | 6.64563857780073e-20 | 0.65718502195723 | 0.000222320071924961 | 0.29711565775064 |
| CER | ADediting_848539 | chr2_222559562_+ | 1.71640508021642e-05 | 0.343156700073475 | 1.68425171933618e-11 | 0.514248878290078 | 0.005537470111287 | 0.225457010477951 |
| CER | ADediting_848541 | chr2_222559566_+ | 3.54376351820031e-10 | 0.48387819939214 | 1.31158469397504e-13 | 0.557179229129671 | 0.00157139802662335 | 0.255936148649664 |
| TCX | ADediting_848541 | chr2_222559566_+ | 0.00022995190955778 | 0.29645573324545 | 3.84720550462551e-06 | 0.367001872463977 | 0.254879365649663 | -0.09354300441897 |
| CER | ADediting_848542 | chr2_222559579_+ | 0.000172329378529211 | 0.30204558747163 | 4.15680162229355e-05 | 0.328082089565772 | 0.00202125858282731 | 0.250133039781619 |
| TCX | ADediting_848542 | chr2_222559579_+ | 1.36471434984928e-07 | 0.414262325160786 | 7.08041522267965e-09 | 0.450809413328372 | 0.112139259853874 | -0.130249192623607 |
| CER | ADediting_848544 | chr2_222559604_+ | 3.02310447783723e-05 | 0.333600416735659 | 0.00017816923406547 | 0.301405526181189 | 0.00516493920531832 | 0.227244194920161 |
| CER | ADediting_848545 | chr2_222559625_+ | 1.12483534086693e-08 | 0.445368694156267 | 7.99531196075717e-10 | 0.475236028133632 | 0.000140906519799492 | 0.305880936346482 |
| DLPFC | ADediting_848547 | chr2_222559630_+ | 0.119445119512967 | 0.0886216469537053 | 0.826553765459027 | -0.0124953767238503 | 6.88890155774381e-08 | 0.300467015037204 |
| CER | ADediting_848549 | chr2_222559644_+ | 1.23517017756144e-08 | 0.444257180347395 | 1.41680106538933e-09 | 0.46901195822417 | 0.00495433848858713 | 0.228306210843132 |
| TCX | ADediting_848549 | chr2_222559644_+ | 1.42768182940742e-06 | 0.381817428425286 | 5.18971997757113e-08 | 0.426686271201782 | 0.405148146505044 | -0.0684631749114693 |
| CER | ADediting_848550 | chr2_222559655_+ | 5.18729504686341e-07 | 0.396234114715631 | 3.55887894040183e-11 | 0.50706273319954 | 0.00147152544999245 | 0.257428438378678 |
| CER | ADediting_848553 | chr2_222559707_+ | 8.34646973346892e-11 | 0.498665557540363 | 1.17604090672947e-19 | 0.653858821870287 | 8.47938705085224e-05 | 0.315329585027671 |
| CER | ADediting_848556 | chr2_222559729_+ | 0.000983298488448865 | 0.266406254116857 | 5.17189103504108e-06 | 0.362433739264521 | 0.0739881059102843 | 0.146320219915442 |
| CER | ADediting_848568 | chr2_222561011_+ | 2.88038601063204e-06 | 0.371403558739615 | 1.42021199975103e-08 | 0.442591509245414 | 0.00815058179313355 | 0.215287727425426 |
| CER | ADediting_848570 | chr2_222561026_+ | 0.00427080261567055 | 0.232056316398052 | 2.90848201283405e-07 | 0.404176477942713 | 0.0205648425912194 | 0.188964679182029 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.52102391098006e-26 | 0.552557620864837 | 1.1701873538252e-11 | 0.372822806765887 | 2.32987996710055e-27 | 0.563363030112008 |
| AC | 1.523686547674e-88 | 0.894213589660969 | 5.10784789745733e-92 | 0.901180906376081 | 0.00326891180889466 | 0.18533549821109 |
| PCC | 8.18066317338026e-29 | 0.69435776807446 | 8.37107670539347e-41 | 0.782846417173131 | 0.0858360244570458 | 0.124627525416724 |
| CER | 9.74436476760845e-39 | 0.826361752508624 | 5.77891885801042e-45 | 0.85941660793011 | 0.0113264542239704 | 0.206271595639018 |
| TCX | 2.12517053696772e-29 | 0.759218387462445 | 1.64515260664095e-31 | 0.776675795514251 | 0.412090720384726 | -0.0674586705909846 |
| FP | 4.73437540400601e-33 | 0.747188377250328 | 1.73647743151535e-22 | 0.646975248059057 | 0.00441586939364986 | 0.212433670846079 |
| IFG | 8.66672315620842e-05 | 0.703752279918552 | 3.86049052721422e-05 | 0.726906922011096 | 0.220366501235181 | 0.254071561412648 |
| PG | 6.43267042353737e-50 | 0.836356008610309 | 9.68682821470259e-33 | 0.733974273786352 | 0.434881847006527 | -0.0575965308465298 |
| STG | 9.20261278029186e-27 | 0.868867693090215 | 1.95956141344739e-20 | 0.806820026523684 | 0.394279551577879 | 0.0941520024166763 |
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Relation with AD stages for SGPP2 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_848496 | chr2_222426097_+ | 0.00078729441132988 | -0.318307577292449 |
| CER | ADediting_848498 | chr2_222426119_+ | 0.000781581465698234 | -0.318488405484103 |
| CER | ADediting_848529 | chr2_222559515_+ | 1.23236454216817e-05 | 0.407045967845339 |
| CER | ADediting_848531 | chr2_222559523_+ | 2.32713501433453e-06 | 0.436513514818908 |
| CER | ADediting_848533 | chr2_222559526_+ | 0.000425105382962065 | 0.333227862994483 |
| CER | ADediting_848534 | chr2_222559531_+ | 1.0104064363506e-05 | 0.41070559980345 |
| CER | ADediting_848537 | chr2_222559543_+ | 4.69012295036849e-07 | 0.462442623779169 |
| CER | ADediting_848539 | chr2_222559562_+ | 2.85096352151917e-06 | 0.43306906762144 |
| CER | ADediting_848541 | chr2_222559566_+ | 0.000924040461827523 | 0.31430246194226 |
| CER | ADediting_848545 | chr2_222559625_+ | 0.00135342573863771 | 0.304529290141112 |
| CER | ADediting_848553 | chr2_222559707_+ | 2.12706786102667e-06 | 0.438026685973839 |
| CER | ADediting_848556 | chr2_222559729_+ | 0.000647307515917571 | 0.323130170491652 |
| CER | ADediting_848564 | chr2_222560994_+ | 0.000245820925902875 | 0.345886222005642 |
| CER | ADediting_848568 | chr2_222561011_+ | 0.00145965603285211 | 0.302554308369616 |
| CER | ADediting_848570 | chr2_222561026_+ | 0.000391411445533895 | 0.335171044441357 |
| TCX | ADediting_848537 | chr2_222559543_+ | 0.000521931683480896 | 0.331321022705336 |
| TCX | ADediting_848553 | chr2_222559707_+ | 0.000150001225545847 | 0.36006041085102 |
| TCX | ADediting_848555 | chr2_222559717_+ | 5.98132300512574e-07 | 0.462543154327817 |
| IFG | ADediting_848531 | chr2_222559523_+ | 0.0167932537262378 | 0.473566809909158 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000152670103774399 | 0.35647594801359 |
| TCX | 0.00152348076828583 | 0.304190029567846 |
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RelatedDrugs for SGPP2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SGPP2 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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