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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for FITM2 |
 Gene summary |
| Gene information | Gene symbol | FITM2 | Gene ID | 128486 |
| Gene name | fat storage inducing transmembrane protein 2 | |
| Synonyms | C20orf142|Fit2|SIDDIS|dJ881L22.2 | |
| Cytomap | 20q13.12 | |
| Type of gene | protein-coding | |
| Description | fat storage-inducing transmembrane protein 2fat-inducing protein 2fat-inducing transcript 2 | |
| Modification date | 20200313 | |
| UniProtAcc | Q8N6M3, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for FITM2 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_936907(44303687, -), ADediting_936908(44303693, -), ADediting_936909(44303701, -), ADediting_936910(44303710, -), ADediting_936911(44303717, -), ADediting_936912(44303721, -), ADediting_936913(44303722, -), ADediting_936914(44303730, -), ADediting_936915(44303736, -), ADediting_936916(44303753, -), ADediting_936917(44303757, -), ADediting_936918(44303762, -), ADediting_936919(44303763, -), ADediting_936920(44303773, -), ADediting_936921(44303785, -), ADediting_936922(44303789, -), ADediting_936923(44303795, -), ADediting_936924(44303798, -), ADediting_936925(44303802, -), ADediting_936926(44303804, -), ADediting_936927(44303818, -), ADediting_936928(44303820, -), ADediting_936929(44303821, -), ADediting_936930(44303826, -), ADediting_936931(44303833, -), ADediting_936932(44303888, -), ADediting_936933(44303889, -), ADediting_936934(44303895, -), ADediting_936935(44303911, -), ADediting_936936(44304230, -), ADediting_936937(44304922, -), ADediting_936938(44304960, -), ADediting_936939(44304987, -), ADediting_936940(44304995, -), ADediting_936941(44304996, -), ADediting_936942(44304998, -), ADediting_936943(44305002, -), ADediting_936944(44305018, -), ADediting_936945(44305201, -), ADediting_936946(44305560, -), ADediting_936947(44305566, -), ADediting_936948(44305578, -), ADediting_936949(44305597, -), ADediting_936950(44305601, -), ADediting_936951(44305606, -), ADediting_936952(44305618, -), ADediting_936953(44305619, -), ADediting_936954(44305620, -), ADediting_936955(44305657, -), ADediting_936956(44305660, -), ADediting_936957(44305698, -), ADediting_936958(44305700, -), ADediting_936959(44305710, -), ADediting_936960(44305713, -), ADediting_936961(44305722, -), ADediting_936962(44305739, -), ADediting_936963(44305746, -), ADediting_936964(44305759, -), ADediting_936965(44305775, -), ADediting_936966(44305783, -), ADediting_936967(44305922, -), ADediting_936968(44305964, -), ADediting_936969(44305968, -), ADediting_936970(44305984, -), ADediting_936971(44305997, -), ADediting_936972(44306003, -), ADediting_936973(44306016, -), ADediting_936974(44306020, -), ADediting_936975(44306024, -), ADediting_936976(44306029, -), ADediting_936977(44306030, -), ADediting_936978(44306040, -), ADediting_936979(44306056, -), ADediting_936980(44306059, -), ADediting_936981(44306065, -), ADediting_936982(44306067, -), ADediting_936983(44306070, -), ADediting_936984(44306071, -), ADediting_936985(44306092, -), ADediting_936986(44306094, -), ADediting_936987(44306104, -), ADediting_936988(44306109, -), ADediting_936989(44306123, -), ADediting_936990(44306128, -), ADediting_936991(44306137, -), ADediting_936992(44306155, -), ADediting_936993(44306163, -), ADediting_936994(44306164, -), ADediting_936995(44306170, -), ADediting_936996(44306186, -), ADediting_936997(44307498, -), ADediting_936998(44307563, -), ADediting_936999(44307608, -), ADediting_937000(44307653, -), ADediting_937001(44307831, -), ADediting_937002(44307898, -), ADediting_937003(44307906, -), ADediting_937004(44307965, -), ADediting_937005(44308061, -), ADediting_937006(44308068, -), ADediting_937007(44308789, -), ADediting_937008(44308818, -), ADediting_937009(44309290, -), ADediting_937010(44309317, -), ADediting_937011(44309373, -), ADediting_937012(44309452, -), ADediting_937013(44309469, -), ADediting_1566907(44305674, -), ADediting_1566908(44305952, -), ADediting_1566909(44305957, -), ADediting_1566910(44306069, -), ADediting_1566911(44306085, -), ADediting_1566912(44306107, -), ADediting_1566913(44306141, -), ADediting_1640896(44306061, -), ADediting_1640897(44306095, -), |
Top |
RNA editing positional annotations for FITM2 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_936907 | chr20_44303687_- | UTR3 |
| ADediting_936908 | chr20_44303693_- | UTR3 |
| ADediting_936909 | chr20_44303701_- | UTR3 |
| ADediting_936910 | chr20_44303710_- | UTR3 |
| ADediting_936911 | chr20_44303717_- | UTR3 |
| ADediting_936912 | chr20_44303721_- | UTR3 |
| ADediting_936913 | chr20_44303722_- | UTR3 |
| ADediting_936914 | chr20_44303730_- | UTR3 |
| ADediting_936915 | chr20_44303736_- | UTR3 |
| ADediting_936916 | chr20_44303753_- | UTR3 |
| ADediting_936917 | chr20_44303757_- | UTR3 |
| ADediting_936918 | chr20_44303762_- | UTR3 |
| ADediting_936919 | chr20_44303763_- | UTR3 |
| ADediting_936920 | chr20_44303773_- | UTR3 |
| ADediting_936921 | chr20_44303785_- | UTR3 |
| ADediting_936922 | chr20_44303789_- | UTR3 |
| ADediting_936923 | chr20_44303795_- | UTR3 |
| ADediting_936924 | chr20_44303798_- | UTR3 |
| ADediting_936925 | chr20_44303802_- | UTR3 |
| ADediting_936926 | chr20_44303804_- | UTR3 |
| ADediting_936927 | chr20_44303818_- | UTR3 |
| ADediting_936928 | chr20_44303820_- | UTR3 |
| ADediting_936929 | chr20_44303821_- | UTR3 |
| ADediting_936930 | chr20_44303826_- | UTR3 |
| ADediting_936931 | chr20_44303833_- | UTR3 |
| ADediting_936932 | chr20_44303888_- | UTR3 |
| ADediting_936933 | chr20_44303889_- | UTR3 |
| ADediting_936934 | chr20_44303895_- | UTR3 |
| ADediting_936935 | chr20_44303911_- | UTR3 |
| ADediting_936936 | chr20_44304230_- | UTR3 |
| ADediting_936937 | chr20_44304922_- | UTR3 |
| ADediting_936938 | chr20_44304960_- | UTR3 |
| ADediting_936939 | chr20_44304987_- | UTR3 |
| ADediting_936940 | chr20_44304995_- | UTR3 |
| ADediting_936941 | chr20_44304996_- | UTR3 |
| ADediting_936942 | chr20_44304998_- | UTR3 |
| ADediting_936943 | chr20_44305002_- | UTR3 |
| ADediting_936944 | chr20_44305018_- | UTR3 |
| ADediting_936945 | chr20_44305201_- | UTR3 |
| ADediting_936946 | chr20_44305560_- | UTR3 |
| ADediting_936947 | chr20_44305566_- | UTR3 |
| ADediting_936948 | chr20_44305578_- | UTR3 |
| ADediting_936949 | chr20_44305597_- | UTR3 |
| ADediting_936950 | chr20_44305601_- | UTR3 |
| ADediting_936951 | chr20_44305606_- | UTR3 |
| ADediting_936952 | chr20_44305618_- | UTR3 |
| ADediting_936953 | chr20_44305619_- | UTR3 |
| ADediting_936954 | chr20_44305620_- | UTR3 |
| ADediting_936955 | chr20_44305657_- | UTR3 |
| ADediting_936956 | chr20_44305660_- | UTR3 |
| ADediting_936957 | chr20_44305698_- | UTR3 |
| ADediting_936958 | chr20_44305700_- | UTR3 |
| ADediting_936959 | chr20_44305710_- | UTR3 |
| ADediting_936960 | chr20_44305713_- | UTR3 |
| ADediting_936961 | chr20_44305722_- | UTR3 |
| ADediting_936962 | chr20_44305739_- | UTR3 |
| ADediting_936963 | chr20_44305746_- | UTR3 |
| ADediting_936964 | chr20_44305759_- | UTR3 |
| ADediting_936965 | chr20_44305775_- | UTR3 |
| ADediting_936966 | chr20_44305783_- | UTR3 |
| ADediting_936967 | chr20_44305922_- | UTR3 |
| ADediting_936968 | chr20_44305964_- | UTR3 |
| ADediting_936969 | chr20_44305968_- | UTR3 |
| ADediting_936970 | chr20_44305984_- | UTR3 |
| ADediting_936971 | chr20_44305997_- | UTR3 |
| ADediting_936972 | chr20_44306003_- | UTR3 |
| ADediting_936973 | chr20_44306016_- | UTR3 |
| ADediting_936974 | chr20_44306020_- | UTR3 |
| ADediting_936975 | chr20_44306024_- | UTR3 |
| ADediting_936976 | chr20_44306029_- | UTR3 |
| ADediting_936977 | chr20_44306030_- | UTR3 |
| ADediting_936978 | chr20_44306040_- | UTR3 |
| ADediting_936979 | chr20_44306056_- | UTR3 |
| ADediting_936980 | chr20_44306059_- | UTR3 |
| ADediting_936981 | chr20_44306065_- | UTR3 |
| ADediting_936982 | chr20_44306067_- | UTR3 |
| ADediting_936983 | chr20_44306070_- | UTR3 |
| ADediting_936984 | chr20_44306071_- | UTR3 |
| ADediting_936985 | chr20_44306092_- | UTR3 |
| ADediting_936986 | chr20_44306094_- | UTR3 |
| ADediting_936987 | chr20_44306104_- | UTR3 |
| ADediting_936988 | chr20_44306109_- | UTR3 |
| ADediting_936989 | chr20_44306123_- | UTR3 |
| ADediting_936990 | chr20_44306128_- | UTR3 |
| ADediting_936991 | chr20_44306137_- | UTR3 |
| ADediting_936992 | chr20_44306155_- | UTR3 |
| ADediting_936993 | chr20_44306163_- | UTR3 |
| ADediting_936994 | chr20_44306164_- | UTR3 |
| ADediting_936995 | chr20_44306170_- | UTR3 |
| ADediting_936996 | chr20_44306186_- | UTR3 |
| ADediting_936997 | chr20_44307498_- | intronic |
| ADediting_936998 | chr20_44307563_- | intronic |
| ADediting_936999 | chr20_44307608_- | intronic |
| ADediting_937000 | chr20_44307653_- | intronic |
| ADediting_937001 | chr20_44307831_- | intronic |
| ADediting_937002 | chr20_44307898_- | intronic |
| ADediting_937003 | chr20_44307906_- | intronic |
| ADediting_937004 | chr20_44307965_- | intronic |
| ADediting_937005 | chr20_44308061_- | intronic |
| ADediting_937006 | chr20_44308068_- | intronic |
| ADediting_937007 | chr20_44308789_- | intronic |
| ADediting_937008 | chr20_44308818_- | intronic |
| ADediting_937009 | chr20_44309290_- | intronic |
| ADediting_937010 | chr20_44309317_- | intronic |
| ADediting_937011 | chr20_44309373_- | intronic |
| ADediting_937012 | chr20_44309452_- | intronic |
| ADediting_937013 | chr20_44309469_- | intronic |
| ADediting_1566907 | chr20_44305674_- | UTR3 |
| ADediting_1566908 | chr20_44305952_- | UTR3 |
| ADediting_1566909 | chr20_44305957_- | UTR3 |
| ADediting_1566910 | chr20_44306069_- | UTR3 |
| ADediting_1566911 | chr20_44306085_- | UTR3 |
| ADediting_1566912 | chr20_44306107_- | UTR3 |
| ADediting_1566913 | chr20_44306141_- | UTR3 |
| ADediting_1640896 | chr20_44306061_- | UTR3 |
| ADediting_1640897 | chr20_44306095_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_936907 | chr20_44303687_- | SINE | Alu | Name=AluSz |
| ADediting_936908 | chr20_44303693_- | SINE | Alu | Name=AluSz |
| ADediting_936909 | chr20_44303701_- | SINE | Alu | Name=AluSz |
| ADediting_936910 | chr20_44303710_- | SINE | Alu | Name=AluSz |
| ADediting_936911 | chr20_44303717_- | SINE | Alu | Name=AluSz |
| ADediting_936912 | chr20_44303721_- | SINE | Alu | Name=AluSz |
| ADediting_936913 | chr20_44303722_- | SINE | Alu | Name=AluSz |
| ADediting_936914 | chr20_44303730_- | SINE | Alu | Name=AluSz |
| ADediting_936915 | chr20_44303736_- | SINE | Alu | Name=AluSz |
| ADediting_936916 | chr20_44303753_- | SINE | Alu | Name=AluSz |
| ADediting_936917 | chr20_44303757_- | SINE | Alu | Name=AluSz |
| ADediting_936918 | chr20_44303762_- | SINE | Alu | Name=AluSz |
| ADediting_936919 | chr20_44303763_- | SINE | Alu | Name=AluSz |
| ADediting_936920 | chr20_44303773_- | SINE | Alu | Name=AluSz |
| ADediting_936921 | chr20_44303785_- | SINE | Alu | Name=AluSz |
| ADediting_936922 | chr20_44303789_- | SINE | Alu | Name=AluSz |
| ADediting_936923 | chr20_44303795_- | SINE | Alu | Name=AluSz |
| ADediting_936924 | chr20_44303798_- | SINE | Alu | Name=AluSz |
| ADediting_936925 | chr20_44303802_- | SINE | Alu | Name=AluSz |
| ADediting_936926 | chr20_44303804_- | SINE | Alu | Name=AluSz |
| ADediting_936927 | chr20_44303818_- | SINE | Alu | Name=AluSz |
| ADediting_936928 | chr20_44303820_- | SINE | Alu | Name=AluSz |
| ADediting_936929 | chr20_44303821_- | SINE | Alu | Name=AluSz |
| ADediting_936930 | chr20_44303826_- | SINE | Alu | Name=AluSz |
| ADediting_936931 | chr20_44303833_- | SINE | Alu | Name=AluSz |
| ADediting_936932 | chr20_44303888_- | SINE | Alu | Name=AluSz |
| ADediting_936933 | chr20_44303889_- | SINE | Alu | Name=AluSz |
| ADediting_936934 | chr20_44303895_- | SINE | Alu | Name=AluSz |
| ADediting_936935 | chr20_44303911_- | SINE | Alu | Name=AluSz |
| ADediting_936937 | chr20_44304922_- | SINE | Alu | Name=AluJo |
| ADediting_936938 | chr20_44304960_- | SINE | Alu | Name=AluJo |
| ADediting_936939 | chr20_44304987_- | SINE | Alu | Name=AluJo |
| ADediting_936940 | chr20_44304995_- | SINE | Alu | Name=AluJo |
| ADediting_936941 | chr20_44304996_- | SINE | Alu | Name=AluJo |
| ADediting_936942 | chr20_44304998_- | SINE | Alu | Name=AluJo |
| ADediting_936943 | chr20_44305002_- | SINE | Alu | Name=AluJo |
| ADediting_936944 | chr20_44305018_- | SINE | Alu | Name=AluJo |
| ADediting_936946 | chr20_44305560_- | SINE | Alu | Name=AluSp |
| ADediting_936947 | chr20_44305566_- | SINE | Alu | Name=AluSp |
| ADediting_936948 | chr20_44305578_- | SINE | Alu | Name=AluSp |
| ADediting_936949 | chr20_44305597_- | SINE | Alu | Name=AluSp |
| ADediting_936950 | chr20_44305601_- | SINE | Alu | Name=AluSp |
| ADediting_936951 | chr20_44305606_- | SINE | Alu | Name=AluSp |
| ADediting_936952 | chr20_44305618_- | SINE | Alu | Name=AluSp |
| ADediting_936953 | chr20_44305619_- | SINE | Alu | Name=AluSp |
| ADediting_936954 | chr20_44305620_- | SINE | Alu | Name=AluSp |
| ADediting_936955 | chr20_44305657_- | SINE | Alu | Name=AluSp |
| ADediting_936956 | chr20_44305660_- | SINE | Alu | Name=AluSp |
| ADediting_936957 | chr20_44305698_- | SINE | Alu | Name=AluSp |
| ADediting_936958 | chr20_44305700_- | SINE | Alu | Name=AluSp |
| ADediting_936959 | chr20_44305710_- | SINE | Alu | Name=AluSp |
| ADediting_936960 | chr20_44305713_- | SINE | Alu | Name=AluSp |
| ADediting_936961 | chr20_44305722_- | SINE | Alu | Name=AluSp |
| ADediting_936962 | chr20_44305739_- | SINE | Alu | Name=AluSp |
| ADediting_936963 | chr20_44305746_- | SINE | Alu | Name=AluSp |
| ADediting_936964 | chr20_44305759_- | SINE | Alu | Name=AluSp |
| ADediting_936965 | chr20_44305775_- | SINE | Alu | Name=AluSp |
| ADediting_936966 | chr20_44305783_- | SINE | Alu | Name=AluSp |
| ADediting_936967 | chr20_44305922_- | SINE | Alu | Name=AluSx |
| ADediting_936968 | chr20_44305964_- | SINE | Alu | Name=AluSx |
| ADediting_936969 | chr20_44305968_- | SINE | Alu | Name=AluSx |
| ADediting_936970 | chr20_44305984_- | SINE | Alu | Name=AluSx |
| ADediting_936971 | chr20_44305997_- | SINE | Alu | Name=AluSx |
| ADediting_936972 | chr20_44306003_- | SINE | Alu | Name=AluSx |
| ADediting_936973 | chr20_44306016_- | SINE | Alu | Name=AluSx |
| ADediting_936974 | chr20_44306020_- | SINE | Alu | Name=AluSx |
| ADediting_936975 | chr20_44306024_- | SINE | Alu | Name=AluSx |
| ADediting_936976 | chr20_44306029_- | SINE | Alu | Name=AluSx |
| ADediting_936977 | chr20_44306030_- | SINE | Alu | Name=AluSx |
| ADediting_936978 | chr20_44306040_- | SINE | Alu | Name=AluSx |
| ADediting_936979 | chr20_44306056_- | SINE | Alu | Name=AluSx |
| ADediting_936980 | chr20_44306059_- | SINE | Alu | Name=AluSx |
| ADediting_936981 | chr20_44306065_- | SINE | Alu | Name=AluSx |
| ADediting_936982 | chr20_44306067_- | SINE | Alu | Name=AluSx |
| ADediting_936983 | chr20_44306070_- | SINE | Alu | Name=AluSx |
| ADediting_936984 | chr20_44306071_- | SINE | Alu | Name=AluSx |
| ADediting_936985 | chr20_44306092_- | SINE | Alu | Name=AluSx |
| ADediting_936986 | chr20_44306094_- | SINE | Alu | Name=AluSx |
| ADediting_936987 | chr20_44306104_- | SINE | Alu | Name=AluSx |
| ADediting_936988 | chr20_44306109_- | SINE | Alu | Name=AluSx |
| ADediting_936989 | chr20_44306123_- | SINE | Alu | Name=AluSx |
| ADediting_936990 | chr20_44306128_- | SINE | Alu | Name=AluSx |
| ADediting_936991 | chr20_44306137_- | SINE | Alu | Name=AluSx |
| ADediting_936992 | chr20_44306155_- | SINE | Alu | Name=AluSx |
| ADediting_936993 | chr20_44306163_- | SINE | Alu | Name=AluSx |
| ADediting_936994 | chr20_44306164_- | SINE | Alu | Name=AluSx |
| ADediting_936995 | chr20_44306170_- | SINE | Alu | Name=AluSx |
| ADediting_936996 | chr20_44306186_- | SINE | Alu | Name=AluSx |
| ADediting_936997 | chr20_44307498_- | SINE | Alu | Name=AluSz6 |
| ADediting_936998 | chr20_44307563_- | SINE | Alu | Name=AluSz6 |
| ADediting_936999 | chr20_44307608_- | SINE | Alu | Name=AluSz6 |
| ADediting_937000 | chr20_44307653_- | SINE | Alu | Name=AluSz6 |
| ADediting_937001 | chr20_44307831_- | SINE | Alu | Name=AluY |
| ADediting_937002 | chr20_44307898_- | SINE | Alu | Name=AluY |
| ADediting_937003 | chr20_44307906_- | SINE | Alu | Name=AluY |
| ADediting_937004 | chr20_44307965_- | SINE | Alu | Name=AluY |
| ADediting_937005 | chr20_44308061_- | SINE | Alu | Name=AluY |
| ADediting_937006 | chr20_44308068_- | SINE | Alu | Name=AluY |
| ADediting_937007 | chr20_44308789_- | SINE | Alu | Name=AluJr |
| ADediting_937008 | chr20_44308818_- | SINE | Alu | Name=AluJr |
| ADediting_937009 | chr20_44309290_- | SINE | Alu | Name=AluSz |
| ADediting_937010 | chr20_44309317_- | SINE | Alu | Name=AluSz |
| ADediting_937011 | chr20_44309373_- | SINE | Alu | Name=AluSz |
| ADediting_937012 | chr20_44309452_- | SINE | Alu | Name=AluSz |
| ADediting_937013 | chr20_44309469_- | SINE | Alu | Name=AluSz |
| ADediting_1566907 | chr20_44305674_- | SINE | Alu | Name=AluSp |
| ADediting_1566908 | chr20_44305952_- | SINE | Alu | Name=AluSx |
| ADediting_1566909 | chr20_44305957_- | SINE | Alu | Name=AluSx |
| ADediting_1566910 | chr20_44306069_- | SINE | Alu | Name=AluSx |
| ADediting_1566911 | chr20_44306085_- | SINE | Alu | Name=AluSx |
| ADediting_1566912 | chr20_44306107_- | SINE | Alu | Name=AluSx |
| ADediting_1566913 | chr20_44306141_- | SINE | Alu | Name=AluSx |
| ADediting_1640896 | chr20_44306061_- | SINE | Alu | Name=AluSx |
| ADediting_1640897 | chr20_44306095_- | SINE | Alu | Name=AluSx |
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RNA A-to-I editing events in the alternative splicing sites for FITM2 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FITM2 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |