ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for TCEANC2

Gene summary

Gene information	Gene symbol	TCEANC2
	Gene ID	127428
	Gene name	transcription elongation factor A N-terminal and central domain containing 2
	Synonyms	C1orf83
	Cytomap	1p32.3
	Type of gene	protein-coding
	Description	transcription elongation factor A N-terminal and central domain-containing protein 2transcription elongation factor A (SII) N-terminal and central domain containing 2
	Modification date	20200313
	UniProtAcc	Q96MN5,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for TCEANC2

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_128074(54066189, +), ADediting_128075(54099480, +), ADediting_128076(54099486, +), ADediting_128077(54099488, +), ADediting_128078(54099489, +), ADediting_128079(54099505, +), ADediting_128080(54099515, +), ADediting_128081(54099521, +), ADediting_128082(54099534, +), ADediting_128083(54099545, +), ADediting_128084(54099568, +), ADediting_128085(54099582, +), ADediting_128086(54099583, +), ADediting_128087(54099584, +), ADediting_128088(54099591, +), ADediting_128089(54099592, +), ADediting_128090(54099593, +), ADediting_128091(54099597, +), ADediting_128092(54099601, +), ADediting_128093(54099623, +), ADediting_128094(54099624, +), ADediting_128095(54099629, +), ADediting_128096(54099633, +), ADediting_128097(54099640, +), ADediting_128098(54099646, +), ADediting_128099(54099656, +), ADediting_128100(54099664, +), ADediting_128101(54099665, +), ADediting_128102(54099685, +), ADediting_128103(54099688, +), ADediting_128104(54099689, +), ADediting_128105(54099693, +), ADediting_128106(54099694, +), ADediting_128107(54099701, +), ADediting_128108(54099709, +), ADediting_128109(54099726, +), ADediting_128110(54100225, +), ADediting_128111(54101674, +), ADediting_128112(54101696, +), ADediting_128113(54101707, +), ADediting_128114(54101717, +), ADediting_128115(54101722, +), ADediting_128116(54101729, +), ADediting_128117(54101736, +), ADediting_128118(54101743, +), ADediting_128119(54101746, +), ADediting_128120(54101747, +), ADediting_128121(54101755, +), ADediting_128122(54101769, +), ADediting_128123(54101770, +), ADediting_128124(54101783, +), ADediting_128125(54101785, +), ADediting_128126(54101789, +), ADediting_128127(54101820, +), ADediting_128128(54101844, +), ADediting_128129(54101869, +), ADediting_128130(54101870, +), ADediting_128131(54101897, +), ADediting_128132(54101909, +), ADediting_128133(54101911, +), ADediting_128134(54101915, +), ADediting_128135(54104581, +), ADediting_128136(54104603, +), ADediting_128137(54104616, +), ADediting_128138(54104622, +), ADediting_128139(54104642, +), ADediting_128140(54104646, +), ADediting_128141(54104659, +), ADediting_128142(54104671, +), ADediting_128143(54104681, +), ADediting_128144(54104703, +), ADediting_128145(54104722, +), ADediting_128146(54104725, +), ADediting_128147(54104756, +), ADediting_128148(54104777, +), ADediting_128149(54104780, +), ADediting_128150(54104785, +), ADediting_128151(54104794, +), ADediting_128152(54104804, +), ADediting_128153(54104816, +), ADediting_128154(54104818, +), ADediting_128155(54105691, +), ADediting_128156(54105701, +), ADediting_128157(54105706, +), ADediting_128158(54105707, +), ADediting_128159(54105726, +), ADediting_128160(54105727, +), ADediting_128161(54105756, +), ADediting_128162(54105766, +), ADediting_128163(54105774, +), ADediting_128164(54105783, +), ADediting_128165(54105802, +), ADediting_128166(54105804, +), ADediting_128167(54105806, +), ADediting_128168(54105818, +), ADediting_128169(54105830, +), ADediting_128170(54105881, +), ADediting_128171(54105893, +), ADediting_128172(54105895, +), ADediting_128173(54105899, +), ADediting_1520718(54099653, +), ADediting_1520719(54101712, +), ADediting_1520720(54101742, +), ADediting_1520721(54101801, +), ADediting_1520722(54101874, +), ADediting_1520723(54101896, +), ADediting_1520724(54104672, +), ADediting_1520725(54104687, +), ADediting_1520726(54104694, +), ADediting_1520727(54112281, +),

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RNA editing positional annotations for TCEANC2 using Annovar

Protein coding RNA editing(s).

ADeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
ADediting_128135	chr1_54104581_+	synonymous SNV	ENST00000391366.3	c.A114G	p.S38S	.	.	.
ADediting_128136	chr1_54104603_+	nonsynonymous SNV	ENST00000391366.3	c.A136G	p.T46A	.	.	.
ADediting_128137	chr1_54104616_+	nonsynonymous SNV	ENST00000391366.3	c.A149G	p.H50R	.	.	.
ADediting_128138	chr1_54104622_+	nonsynonymous SNV	ENST00000391366.3	c.A155G	p.N52S	.	.	.
ADediting_128139	chr1_54104642_+	nonsynonymous SNV	ENST00000391366.3	c.A175G	p.S59G	.	.	.
ADediting_128140	chr1_54104646_+	nonsynonymous SNV	ENST00000391366.3	c.A179G	p.Y60C	.	.	.
ADediting_128141	chr1_54104659_+	synonymous SNV	ENST00000391366.3	c.A192G	p.S64S	.	.	.
ADediting_128142	chr1_54104671_+	synonymous SNV	ENST00000391366.3	c.A204G	p.V68V	.	.	.
ADediting_128143	chr1_54104681_+	nonsynonymous SNV	ENST00000391366.3	c.A214G	p.T72A	.	.	.
ADediting_128144	chr1_54104703_+	nonsynonymous SNV	ENST00000391366.3	c.A236G	p.Q79R	.	.	.
ADediting_128145	chr1_54104722_+	synonymous SNV	ENST00000391366.3	c.A255G	p.L85L	.	.	.
ADediting_128146	chr1_54104725_+	synonymous SNV	ENST00000391366.3	c.A258G	p.V86V	.	.	.
ADediting_128147	chr1_54104756_+	nonsynonymous SNV	ENST00000391366.3	c.A289G	p.S97G	.	.	.
ADediting_128148	chr1_54104777_+	nonsynonymous SNV	ENST00000391366.3	c.A310G	p.S104G	.	.	.
ADediting_128149	chr1_54104780_+	nonsynonymous SNV	ENST00000391366.3	c.A313G	p.S105G	.	.	.
ADediting_128150	chr1_54104785_+	synonymous SNV	ENST00000391366.3	c.A318G	p.P106P	.	.	.
ADediting_128151	chr1_54104794_+	synonymous SNV	ENST00000391366.3	c.A327G	p.S109S	.	.	.
ADediting_128152	chr1_54104804_+	nonsynonymous SNV	ENST00000391366.3	c.A337G	p.S113G	.	.	.
ADediting_128153	chr1_54104816_+	nonsynonymous SNV	ENST00000391366.3	c.A349G	p.T117A	.	.	.
ADediting_128154	chr1_54104818_+	synonymous SNV	ENST00000391366.3	c.A351G	p.T117T	.	.	.
ADediting_1520724	chr1_54104672_+	nonsynonymous SNV	ENST00000391366.3	c.A205G	p.T69A	.	.	.
ADediting_1520725	chr1_54104687_+	nonsynonymous SNV	ENST00000391366.3	c.A220G	p.M74V	.	.	.
ADediting_1520726	chr1_54104694_+	nonsynonymous SNV	ENST00000391366.3	c.A227G	p.H76R	.	.	.

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_128074	chr1_54066189_+	intronic
ADediting_128075	chr1_54099480_+	UTR3
ADediting_128076	chr1_54099486_+	UTR3
ADediting_128077	chr1_54099488_+	UTR3
ADediting_128078	chr1_54099489_+	UTR3
ADediting_128079	chr1_54099505_+	UTR3
ADediting_128080	chr1_54099515_+	UTR3
ADediting_128081	chr1_54099521_+	UTR3
ADediting_128082	chr1_54099534_+	UTR3
ADediting_128083	chr1_54099545_+	UTR3
ADediting_128084	chr1_54099568_+	UTR3
ADediting_128085	chr1_54099582_+	UTR3
ADediting_128086	chr1_54099583_+	UTR3
ADediting_128087	chr1_54099584_+	UTR3
ADediting_128088	chr1_54099591_+	UTR3
ADediting_128089	chr1_54099592_+	UTR3
ADediting_128090	chr1_54099593_+	UTR3
ADediting_128091	chr1_54099597_+	UTR3
ADediting_128092	chr1_54099601_+	UTR3
ADediting_128093	chr1_54099623_+	UTR3
ADediting_128094	chr1_54099624_+	UTR3
ADediting_128095	chr1_54099629_+	UTR3
ADediting_128096	chr1_54099633_+	UTR3
ADediting_128097	chr1_54099640_+	UTR3
ADediting_128098	chr1_54099646_+	UTR3
ADediting_128099	chr1_54099656_+	UTR3
ADediting_128100	chr1_54099664_+	UTR3
ADediting_128101	chr1_54099665_+	UTR3
ADediting_128102	chr1_54099685_+	UTR3
ADediting_128103	chr1_54099688_+	UTR3
ADediting_128104	chr1_54099689_+	UTR3
ADediting_128105	chr1_54099693_+	UTR3
ADediting_128106	chr1_54099694_+	UTR3
ADediting_128107	chr1_54099701_+	UTR3
ADediting_128108	chr1_54099709_+	UTR3
ADediting_128109	chr1_54099726_+	UTR3
ADediting_128110	chr1_54100225_+	UTR3
ADediting_128111	chr1_54101674_+	UTR3
ADediting_128112	chr1_54101696_+	UTR3
ADediting_128113	chr1_54101707_+	UTR3
ADediting_128114	chr1_54101717_+	UTR3
ADediting_128115	chr1_54101722_+	UTR3
ADediting_128116	chr1_54101729_+	UTR3
ADediting_128117	chr1_54101736_+	UTR3
ADediting_128118	chr1_54101743_+	UTR3
ADediting_128119	chr1_54101746_+	UTR3
ADediting_128120	chr1_54101747_+	UTR3
ADediting_128121	chr1_54101755_+	UTR3
ADediting_128122	chr1_54101769_+	UTR3
ADediting_128123	chr1_54101770_+	UTR3
ADediting_128124	chr1_54101783_+	UTR3
ADediting_128125	chr1_54101785_+	UTR3
ADediting_128126	chr1_54101789_+	UTR3
ADediting_128127	chr1_54101820_+	UTR3
ADediting_128128	chr1_54101844_+	UTR3
ADediting_128129	chr1_54101869_+	UTR3
ADediting_128130	chr1_54101870_+	UTR3
ADediting_128131	chr1_54101897_+	UTR3
ADediting_128132	chr1_54101909_+	UTR3
ADediting_128133	chr1_54101911_+	UTR3
ADediting_128134	chr1_54101915_+	UTR3
ADediting_128135	chr1_54104581_+	exonic
ADediting_128136	chr1_54104603_+	exonic
ADediting_128137	chr1_54104616_+	exonic
ADediting_128138	chr1_54104622_+	exonic
ADediting_128139	chr1_54104642_+	exonic
ADediting_128140	chr1_54104646_+	exonic
ADediting_128141	chr1_54104659_+	exonic
ADediting_128142	chr1_54104671_+	exonic
ADediting_128143	chr1_54104681_+	exonic
ADediting_128144	chr1_54104703_+	exonic
ADediting_128145	chr1_54104722_+	exonic
ADediting_128146	chr1_54104725_+	exonic
ADediting_128147	chr1_54104756_+	exonic
ADediting_128148	chr1_54104777_+	exonic
ADediting_128149	chr1_54104780_+	exonic
ADediting_128150	chr1_54104785_+	exonic
ADediting_128151	chr1_54104794_+	exonic
ADediting_128152	chr1_54104804_+	exonic
ADediting_128153	chr1_54104816_+	exonic
ADediting_128154	chr1_54104818_+	exonic
ADediting_128155	chr1_54105691_+	UTR3
ADediting_128156	chr1_54105701_+	UTR3
ADediting_128157	chr1_54105706_+	UTR3
ADediting_128158	chr1_54105707_+	UTR3
ADediting_128159	chr1_54105726_+	UTR3
ADediting_128160	chr1_54105727_+	UTR3
ADediting_128161	chr1_54105756_+	UTR3
ADediting_128162	chr1_54105766_+	UTR3
ADediting_128163	chr1_54105774_+	UTR3
ADediting_128164	chr1_54105783_+	UTR3
ADediting_128165	chr1_54105802_+	UTR3
ADediting_128166	chr1_54105804_+	UTR3
ADediting_128167	chr1_54105806_+	UTR3
ADediting_128168	chr1_54105818_+	UTR3
ADediting_128169	chr1_54105830_+	UTR3
ADediting_128170	chr1_54105881_+	UTR3
ADediting_128171	chr1_54105893_+	UTR3
ADediting_128172	chr1_54105895_+	UTR3
ADediting_128173	chr1_54105899_+	UTR3
ADediting_1520718	chr1_54099653_+	UTR3
ADediting_1520719	chr1_54101712_+	UTR3
ADediting_1520720	chr1_54101742_+	UTR3
ADediting_1520721	chr1_54101801_+	UTR3
ADediting_1520722	chr1_54101874_+	UTR3
ADediting_1520723	chr1_54101896_+	UTR3
ADediting_1520724	chr1_54104672_+	exonic
ADediting_1520725	chr1_54104687_+	exonic
ADediting_1520726	chr1_54104694_+	exonic
ADediting_1520727	chr1_54112281_+	UTR3

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_128074	chr1_54066189_+	SINE	Alu	Name=AluJo
ADediting_128075	chr1_54099480_+	SINE	Alu	Name=AluSx1
ADediting_128076	chr1_54099486_+	SINE	Alu	Name=AluSx1
ADediting_128077	chr1_54099488_+	SINE	Alu	Name=AluSx1
ADediting_128078	chr1_54099489_+	SINE	Alu	Name=AluSx1
ADediting_128079	chr1_54099505_+	SINE	Alu	Name=AluSx1
ADediting_128080	chr1_54099515_+	SINE	Alu	Name=AluSx1
ADediting_128081	chr1_54099521_+	SINE	Alu	Name=AluSx1
ADediting_128082	chr1_54099534_+	SINE	Alu	Name=AluSx1
ADediting_128083	chr1_54099545_+	SINE	Alu	Name=AluSx1
ADediting_128084	chr1_54099568_+	SINE	Alu	Name=AluSx1
ADediting_128085	chr1_54099582_+	SINE	Alu	Name=AluSx1
ADediting_128086	chr1_54099583_+	SINE	Alu	Name=AluSx1
ADediting_128087	chr1_54099584_+	SINE	Alu	Name=AluSx1
ADediting_128088	chr1_54099591_+	SINE	Alu	Name=AluSx1
ADediting_128089	chr1_54099592_+	SINE	Alu	Name=AluSx1
ADediting_128090	chr1_54099593_+	SINE	Alu	Name=AluSx1
ADediting_128091	chr1_54099597_+	SINE	Alu	Name=AluSx1
ADediting_128092	chr1_54099601_+	SINE	Alu	Name=AluSx1
ADediting_128093	chr1_54099623_+	SINE	Alu	Name=AluSx1
ADediting_128094	chr1_54099624_+	SINE	Alu	Name=AluSx1
ADediting_128095	chr1_54099629_+	SINE	Alu	Name=AluSx1
ADediting_128096	chr1_54099633_+	SINE	Alu	Name=AluSx1
ADediting_128097	chr1_54099640_+	SINE	Alu	Name=AluSx1
ADediting_128098	chr1_54099646_+	SINE	Alu	Name=AluSx1
ADediting_128099	chr1_54099656_+	SINE	Alu	Name=AluSx1
ADediting_128100	chr1_54099664_+	SINE	Alu	Name=AluSx1
ADediting_128101	chr1_54099665_+	SINE	Alu	Name=AluSx1
ADediting_128102	chr1_54099685_+	SINE	Alu	Name=AluSx1
ADediting_128103	chr1_54099688_+	SINE	Alu	Name=AluSx1
ADediting_128104	chr1_54099689_+	SINE	Alu	Name=AluSx1
ADediting_128105	chr1_54099693_+	SINE	Alu	Name=AluSx1
ADediting_128106	chr1_54099694_+	SINE	Alu	Name=AluSx1
ADediting_128107	chr1_54099701_+	SINE	Alu	Name=AluSx1
ADediting_128108	chr1_54099709_+	SINE	Alu	Name=AluSx1
ADediting_128109	chr1_54099726_+	SINE	Alu	Name=AluSx1
ADediting_128110	chr1_54100225_+	SINE	Alu	Name=AluSx1
ADediting_128111	chr1_54101674_+	SINE	Alu	Name=AluJb
ADediting_128112	chr1_54101696_+	SINE	Alu	Name=AluJb
ADediting_128113	chr1_54101707_+	SINE	Alu	Name=AluJb
ADediting_128114	chr1_54101717_+	SINE	Alu	Name=AluJb
ADediting_128115	chr1_54101722_+	SINE	Alu	Name=AluJb
ADediting_128116	chr1_54101729_+	SINE	Alu	Name=AluJb
ADediting_128117	chr1_54101736_+	SINE	Alu	Name=AluJb
ADediting_128118	chr1_54101743_+	SINE	Alu	Name=AluJb
ADediting_128119	chr1_54101746_+	SINE	Alu	Name=AluJb
ADediting_128120	chr1_54101747_+	SINE	Alu	Name=AluJb
ADediting_128121	chr1_54101755_+	SINE	Alu	Name=AluJb
ADediting_128122	chr1_54101769_+	SINE	Alu	Name=AluJb
ADediting_128123	chr1_54101770_+	SINE	Alu	Name=AluJb
ADediting_128124	chr1_54101783_+	SINE	Alu	Name=AluJb
ADediting_128125	chr1_54101785_+	SINE	Alu	Name=AluJb
ADediting_128126	chr1_54101789_+	SINE	Alu	Name=AluJb
ADediting_128127	chr1_54101820_+	SINE	Alu	Name=AluJb
ADediting_128128	chr1_54101844_+	SINE	Alu	Name=AluJb
ADediting_128129	chr1_54101869_+	SINE	Alu	Name=AluJb
ADediting_128130	chr1_54101870_+	SINE	Alu	Name=AluJb
ADediting_128131	chr1_54101897_+	SINE	Alu	Name=AluJb
ADediting_128132	chr1_54101909_+	SINE	Alu	Name=AluJb
ADediting_128133	chr1_54101911_+	SINE	Alu	Name=AluJb
ADediting_128134	chr1_54101915_+	SINE	Alu	Name=AluJb
ADediting_128135	chr1_54104581_+	SINE	Alu	Name=AluSz
ADediting_128136	chr1_54104603_+	SINE	Alu	Name=AluSz
ADediting_128137	chr1_54104616_+	SINE	Alu	Name=AluSz
ADediting_128138	chr1_54104622_+	SINE	Alu	Name=AluSz
ADediting_128139	chr1_54104642_+	SINE	Alu	Name=AluSz
ADediting_128140	chr1_54104646_+	SINE	Alu	Name=AluSz
ADediting_128141	chr1_54104659_+	SINE	Alu	Name=AluSz
ADediting_128142	chr1_54104671_+	SINE	Alu	Name=AluSz
ADediting_128143	chr1_54104681_+	SINE	Alu	Name=AluSz
ADediting_128144	chr1_54104703_+	SINE	Alu	Name=AluSz
ADediting_128145	chr1_54104722_+	SINE	Alu	Name=AluSz
ADediting_128146	chr1_54104725_+	SINE	Alu	Name=AluSz
ADediting_128147	chr1_54104756_+	SINE	Alu	Name=AluSz
ADediting_128148	chr1_54104777_+	SINE	Alu	Name=AluSz
ADediting_128149	chr1_54104780_+	SINE	Alu	Name=AluSz
ADediting_128150	chr1_54104785_+	SINE	Alu	Name=AluSz
ADediting_128151	chr1_54104794_+	SINE	Alu	Name=AluSz
ADediting_128152	chr1_54104804_+	SINE	Alu	Name=AluSz
ADediting_128153	chr1_54104816_+	SINE	Alu	Name=AluSz
ADediting_128154	chr1_54104818_+	SINE	Alu	Name=AluSz
ADediting_128155	chr1_54105691_+	SINE	Alu	Name=AluSc
ADediting_128156	chr1_54105701_+	SINE	Alu	Name=AluSc
ADediting_128157	chr1_54105706_+	SINE	Alu	Name=AluSc
ADediting_128158	chr1_54105707_+	SINE	Alu	Name=AluSc
ADediting_128159	chr1_54105726_+	SINE	Alu	Name=AluSc
ADediting_128160	chr1_54105727_+	SINE	Alu	Name=AluSc
ADediting_128161	chr1_54105756_+	SINE	Alu	Name=AluSc
ADediting_128162	chr1_54105766_+	SINE	Alu	Name=AluSc
ADediting_128163	chr1_54105774_+	SINE	Alu	Name=AluSc
ADediting_128164	chr1_54105783_+	SINE	Alu	Name=AluSc
ADediting_128165	chr1_54105802_+	SINE	Alu	Name=AluSc
ADediting_128166	chr1_54105804_+	SINE	Alu	Name=AluSc
ADediting_128167	chr1_54105806_+	SINE	Alu	Name=AluSc
ADediting_128168	chr1_54105818_+	SINE	Alu	Name=AluSc
ADediting_128169	chr1_54105830_+	SINE	Alu	Name=AluSc
ADediting_128170	chr1_54105881_+	SINE	Alu	Name=AluSc
ADediting_128171	chr1_54105893_+	SINE	Alu	Name=AluSc
ADediting_128172	chr1_54105895_+	SINE	Alu	Name=AluSc
ADediting_128173	chr1_54105899_+	SINE	Alu	Name=AluSc
ADediting_1520718	chr1_54099653_+	SINE	Alu	Name=AluSx1
ADediting_1520719	chr1_54101712_+	SINE	Alu	Name=AluJb
ADediting_1520720	chr1_54101742_+	SINE	Alu	Name=AluJb
ADediting_1520721	chr1_54101801_+	SINE	Alu	Name=AluJb
ADediting_1520722	chr1_54101874_+	SINE	Alu	Name=AluJb
ADediting_1520723	chr1_54101896_+	SINE	Alu	Name=AluJb
ADediting_1520724	chr1_54104672_+	SINE	Alu	Name=AluSz
ADediting_1520725	chr1_54104687_+	SINE	Alu	Name=AluSz
ADediting_1520726	chr1_54104694_+	SINE	Alu	Name=AluSz
ADediting_1520727	chr1_54112281_+	SINE	Alu	Name=AluJb

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RNA A-to-I editing events in the alternative splicing sites for TCEANC2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCEANC2

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for TCEANC2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TCEANC2

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_128075	chr1_54099480_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3622a-5p	chr1	54099478	54099485	8mer-1a	54099466	54099485	145	-18.11
ADediting_128076	chr1_54099486_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-10399-5p	chr1	54099483	54099489	7mer-m8	54099469	54099490	145	-12.44
ADediting_128076	chr1_54099486_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6504-3p	chr1	54099483	54099489	7mer-m8	54099469	54099490	152	-11.61
ADediting_128076	chr1_54099486_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-7151-3p	chr1	54099481	54099488	8mer-1a	54099468	54099488	150	-15.24
ADediting_128077	chr1_54099488_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-638	chr1	54099487	54099493	7mer-1a	54099469	54099493	142	-24.28
ADediting_128078	chr1_54099489_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-625-3p	chr1	54099483	54099489	7mer-m8	54099469	54099490	140	-11.72
ADediting_128078	chr1_54099489_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-8052	chr1	54099487	54099493	7mer-1a	54099475	54099493	152	-27.21
ADediting_128079	chr1_54099505_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6859-3p	chr1	54099502	54099508	7mer-m8	54099486	54099509	146	-22.35
ADediting_128080	chr1_54099515_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4707-3p	chr1	54099511	54099518	8mer-1a	54099497	54099518	150	-23.67
ADediting_128081	chr1_54099521_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6747-3p	chr1	54099514	54099520	7mer-m8	54099501	54099521	160	-26.59
ADediting_128083	chr1_54099545_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5580-5p	chr1	54099543	54099549	7mer-m8	54099527	54099550	142	-16.38
ADediting_128084	chr1_54099568_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3158-3p	chr1	54099565	54099571	7mer-m8	54099552	54099572	150	-19.46
ADediting_128085	chr1_54099582_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-30a-3p	chr1	54099578	54099585	8mer-1a	54099559	54099585	152	-16.96
ADediting_128085	chr1_54099582_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-30d-3p	chr1	54099578	54099585	8mer-1a	54099559	54099585	157	-17.63
ADediting_128085	chr1_54099582_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-30e-3p	chr1	54099578	54099585	8mer-1a	54099560	54099585	151	-15.78
ADediting_128087	chr1_54099584_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-630	chr1	54099582	54099589	8mer-1a	54099563	54099589	155	-19.51
ADediting_128088	chr1_54099591_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4742-3p	chr1	54099584	54099591	8mer-1a	54099569	54099591	142	-14.28
ADediting_128089	chr1_54099592_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-578	chr1	54099587	54099593	7mer-m8	54099573	54099594	149	-9.14
ADediting_128089	chr1_54099592_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-643	chr1	54099585	54099592	8mer-1a	54099570	54099592	151	-19.17
ADediting_128090	chr1_54099593_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6844	chr1	54099587	54099593	7mer-m8	54099572	54099594	161	-11.8
ADediting_128091	chr1_54099597_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3190-5p	chr1	54099595	54099602	8mer-1a	54099583	54099602	143	-16.58
ADediting_128091	chr1_54099597_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548s	chr1	54099594	54099600	7mer-m8	54099579	54099601	145	-11.19
ADediting_128093	chr1_54099623_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-513a-5p	chr1	54099617	54099623	7mer-m8	54099607	54099624	144	-17.99
ADediting_128093	chr1_54099623_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-638	chr1	54099622	54099628	7mer-1a	54099604	54099628	159	-32.85
ADediting_128094	chr1_54099624_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-8052	chr1	54099622	54099628	7mer-1a	54099608	54099628	145	-22.32
ADediting_128096	chr1_54099633_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1207-3p	chr1	54099626	54099632	7mer-m8	54099616	54099633	140	-12.56
ADediting_128096	chr1_54099633_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-646	chr1	54099628	54099634	7mer-m8	54099617	54099635	145	-16.24
ADediting_128097	chr1_54099640_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4290	chr1	54099636	54099642	7mer-m8	54099625	54099643	140	-14.16
ADediting_128097	chr1_54099640_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4687-5p	chr1	54099637	54099643	7mer-m8	54099623	54099644	145	-21.5
ADediting_128097	chr1_54099640_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5695	chr1	54099633	54099639	7mer-m8	54099619	54099640	147	-14.31
ADediting_128098	chr1_54099646_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6849-3p	chr1	54099639	54099645	7mer-m8	54099628	54099646	143	-16.69
ADediting_128099	chr1_54099656_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4431	chr1	54099652	54099658	7mer-m8	54099637	54099659	152	-18.75
ADediting_128100	chr1_54099664_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-9900	chr1	54099662	54099668	7mer-m8	54099650	54099669	155	-17.23
ADediting_128101	chr1_54099665_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3155a	chr1	54099662	54099668	7mer-m8	54099648	54099669	141	-23.88
ADediting_128101	chr1_54099665_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3155b	chr1	54099662	54099668	7mer-m8	54099651	54099669	141	-22.98
ADediting_128101	chr1_54099665_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-484	chr1	54099662	54099668	7mer-m8	54099648	54099669	152	-18.99
ADediting_128103	chr1_54099688_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4284	chr1	54099685	54099692	8mer-1a	54099675	54099692	151	-18.62
ADediting_128104	chr1_54099689_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-24-1-5p	chr1	54099684	54099690	7mer-m8	54099669	54099691	162	-24.49
ADediting_128104	chr1_54099689_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-24-2-5p	chr1	54099684	54099690	7mer-m8	54099669	54099691	152	-19.42
ADediting_128105	chr1_54099693_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4638-5p	chr1	54099688	54099695	8mer-1a	54099674	54099695	148	-18.44
ADediting_128107	chr1_54099701_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-891a-3p	chr1	54099698	54099704	7mer-m8	54099684	54099705	156	-18.47
ADediting_128112	chr1_54101696_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4793-3p	chr1	54101692	54101698	7mer-m8	54101677	54101699	161	-26.74
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3130-3p	chr1	54101700	54101706	7mer-m8	54101686	54101707	151	-21.37
ADediting_128116	chr1_54101729_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3926	chr1	54101724	54101730	7mer-m8	54101710	54101731	149	-20.09
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1247-3p	chr1	54101731	54101737	7mer-m8	54101716	54101738	164	-31.26
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1827	chr1	54101752	54101759	8mer-1a	54101742	54101759	150	-18.58
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4722-5p	chr1	54101749	54101755	7mer-m8	54101730	54101756	154	-27.86
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6808-5p	chr1	54101751	54101757	7mer-m8	54101737	54101758	147	-20.9
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6893-5p	chr1	54101751	54101757	7mer-m8	54101736	54101758	146	-19.35
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-940	chr1	54101751	54101757	7mer-m8	54101738	54101758	149	-17.09
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6771-5p	chr1	54101763	54101769	7mer-m8	54101750	54101770	158	-30.15
ADediting_128123	chr1_54101770_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6765-3p	chr1	54101766	54101772	7mer-m8	54101753	54101773	149	-20.5
ADediting_128124	chr1_54101783_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4746-5p	chr1	54101776	54101782	7mer-m8	54101763	54101783	152	-23.97
ADediting_128125	chr1_54101785_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5591-3p	chr1	54101782	54101788	7mer-m8	54101768	54101789	150	-17.13
ADediting_128126	chr1_54101789_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1228-3p	chr1	54101784	54101790	7mer-m8	54101774	54101791	147	-18.82
ADediting_128126	chr1_54101789_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-329-3p	chr1	54101785	54101791	7mer-m8	54101769	54101792	148	-17.27
ADediting_128126	chr1_54101789_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-362-3p	chr1	54101785	54101791	7mer-m8	54101769	54101792	158	-20.36
ADediting_128127	chr1_54101820_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3190-5p	chr1	54101818	54101825	8mer-1a	54101807	54101825	142	-16.58
ADediting_128127	chr1_54101820_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548s	chr1	54101817	54101823	7mer-m8	54101799	54101824	146	-15.11
ADediting_128127	chr1_54101820_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-95-5p	chr1	54101813	54101819	7mer-m8	54101799	54101820	144	-9.43
ADediting_128130	chr1_54101870_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3622a-3p	chr1	54101866	54101873	8mer-1a	54101852	54101873	140	-16.8
ADediting_128130	chr1_54101870_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3622b-3p	chr1	54101866	54101873	8mer-1a	54101853	54101873	151	-21.17
ADediting_128130	chr1_54101870_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4649-3p	chr1	54101863	54101869	7mer-m8	54101850	54101870	147	-20.86
ADediting_128130	chr1_54101870_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-544b	chr1	54101864	54101870	7mer-m8	54101851	54101871	149	-19.51
ADediting_128131	chr1_54101897_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6813-3p	chr1	54101892	54101898	7mer-m8	54101879	54101899	140	-12.94
ADediting_128134	chr1_54101915_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4798-3p	chr1	54101913	54101919	7mer-m8	54101898	54101920	151	-19.15
ADediting_128135	chr1_54104581_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4486	chr1	54104579	54104585	7mer-m8	54104570	54104586	145	-21.24
ADediting_128136	chr1_54104603_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-652-3p	chr1	54104600	54104606	7mer-m8	54104587	54104607	160	-23.2
ADediting_128138	chr1_54104622_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-17-3p	chr1	54104615	54104621	7mer-m8	54104601	54104622	150	-16.31
ADediting_128138	chr1_54104622_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-485-5p	chr1	54104619	54104625	7mer-m8	54104606	54104626	153	-20.87
ADediting_128138	chr1_54104622_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6884-5p	chr1	54104619	54104625	7mer-m8	54104603	54104626	150	-25.7
ADediting_128139	chr1_54104642_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4293	chr1	54104638	54104645	8mer-1a	54104626	54104645	148	-17.26
ADediting_128140	chr1_54104646_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4773	chr1	54104643	54104649	7mer-m8	54104626	54104650	151	-19.37
ADediting_128141	chr1_54104659_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6089	chr1	54104657	54104663	7mer-m8	54104640	54104664	165	-37.22
ADediting_128142	chr1_54104671_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4704-3p	chr1	54104668	54104674	7mer-m8	54104654	54104675	140	-13.1
ADediting_128142	chr1_54104671_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-668-3p	chr1	54104666	54104672	7mer-m8	54104651	54104673	150	-22.15
ADediting_128147	chr1_54104756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548aa	chr1	54104754	54104760	7mer-m8	54104737	54104761	140	-8.56
ADediting_128147	chr1_54104756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548ap-3p	chr1	54104754	54104760	7mer-m8	54104743	54104761	140	-5.31
ADediting_128147	chr1_54104756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548t-3p	chr1	54104754	54104760	7mer-m8	54104737	54104761	140	-8.56
ADediting_128147	chr1_54104756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-622	chr1	54104749	54104755	7mer-m8	54104736	54104756	150	-17
ADediting_128148	chr1_54104777_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4649-3p	chr1	54104770	54104776	7mer-m8	54104757	54104777	147	-18.89
ADediting_128148	chr1_54104777_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-544b	chr1	54104771	54104777	7mer-m8	54104758	54104778	153	-15.02
ADediting_128150	chr1_54104785_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3937	chr1	54104782	54104788	7mer-m8	54104766	54104789	147	-25.9
ADediting_128152	chr1_54104804_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3189-3p	chr1	54104798	54104804	7mer-m8	54104782	54104805	153	-26.36
ADediting_128152	chr1_54104804_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6813-3p	chr1	54104799	54104805	7mer-m8	54104786	54104806	140	-11.59
ADediting_128155	chr1_54105691_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548ao-3p	chr1	54105688	54105694	7mer-m8	54105675	54105695	158	-22.41
ADediting_128155	chr1_54105691_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-548ao-3p	chr1	54105688	54105694	7mer-m8	54105675	54105695	158	-22.41
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-17-3p	chr1	54105700	54105706	7mer-m8	54105687	54105707	153	-18.99
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-485-5p	chr1	54105704	54105710	7mer-m8	54105691	54105711	153	-19.66
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6884-5p	chr1	54105704	54105710	7mer-m8	54105689	54105711	146	-21.96
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-17-3p	chr1	54105700	54105706	7mer-m8	54105687	54105707	153	-18.99
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-485-5p	chr1	54105704	54105710	7mer-m8	54105691	54105711	153	-19.66
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6884-5p	chr1	54105704	54105710	7mer-m8	54105689	54105711	146	-21.96
ADediting_128160	chr1_54105727_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6078	chr1	54105723	54105730	8mer-1a	54105712	54105730	149	-20.85
ADediting_128160	chr1_54105727_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6078	chr1	54105723	54105730	8mer-1a	54105712	54105730	149	-20.85
ADediting_128161	chr1_54105756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4691-3p	chr1	54105753	54105759	7mer-m8	54105733	54105760	150	-26.36
ADediting_128161	chr1_54105756_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-4691-3p	chr1	54105753	54105759	7mer-m8	54105733	54105760	150	-26.36
ADediting_128163	chr1_54105774_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4304	chr1	54105767	54105773	7mer-m8	54105758	54105774	140	-14.46
ADediting_128163	chr1_54105774_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4467	chr1	54105770	54105776	7mer-1a	54105753	54105776	141	-28.16
ADediting_128163	chr1_54105774_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6770-3p	chr1	54105770	54105776	7mer-m8	54105757	54105777	148	-20.28
ADediting_128163	chr1_54105774_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-4304	chr1	54105767	54105773	7mer-m8	54105758	54105774	140	-14.46
ADediting_128163	chr1_54105774_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-4467	chr1	54105770	54105776	7mer-1a	54105753	54105776	141	-28.16
ADediting_128163	chr1_54105774_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6770-3p	chr1	54105770	54105776	7mer-m8	54105757	54105777	148	-20.28
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-515-5p	chr1	54105799	54105805	7mer-m8	54105782	54105806	167	-14.89
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-519d-5p	chr1	54105798	54105805	8mer-1a	54105779	54105805	154	-13.29
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-519e-5p	chr1	54105799	54105805	7mer-m8	54105784	54105806	159	-14.75
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5695	chr1	54105799	54105805	7mer-1a	54105784	54105805	141	-11.39
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-515-5p	chr1	54105799	54105805	7mer-m8	54105782	54105806	167	-14.89
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-519d-5p	chr1	54105798	54105805	8mer-1a	54105779	54105805	154	-13.29
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-519e-5p	chr1	54105799	54105805	7mer-m8	54105784	54105806	159	-14.75
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-5695	chr1	54105799	54105805	7mer-1a	54105784	54105805	141	-11.39
ADediting_128166	chr1_54105804_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6867-3p	chr1	54105801	54105807	7mer-m8	54105788	54105808	140	-10.76
ADediting_128166	chr1_54105804_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6867-3p	chr1	54105801	54105807	7mer-m8	54105788	54105808	140	-10.76
ADediting_128167	chr1_54105806_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-642a-5p	chr1	54105801	54105807	7mer-m8	54105787	54105808	155	-15.51
ADediting_128167	chr1_54105806_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-642a-5p	chr1	54105801	54105807	7mer-m8	54105787	54105808	155	-15.51
ADediting_128170	chr1_54105881_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3189-3p	chr1	54105875	54105881	7mer-m8	54105860	54105882	148	-25.1
ADediting_128170	chr1_54105881_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6813-3p	chr1	54105876	54105882	7mer-m8	54105863	54105883	140	-11.13
ADediting_128170	chr1_54105881_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-3189-3p	chr1	54105875	54105881	7mer-m8	54105860	54105882	148	-25.1
ADediting_128170	chr1_54105881_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6813-3p	chr1	54105876	54105882	7mer-m8	54105863	54105883	140	-11.13
ADediting_128171	chr1_54105893_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3618	chr1	54105891	54105898	8mer-1a	54105877	54105898	142	-11.2
ADediting_128171	chr1_54105893_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-3618	chr1	54105891	54105898	8mer-1a	54105877	54105898	142	-11.2
ADediting_128172	chr1_54105895_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3912-5p	chr1	54105892	54105898	7mer-m8	54105879	54105899	149	-14.2
ADediting_128172	chr1_54105895_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-3912-5p	chr1	54105892	54105898	7mer-m8	54105879	54105899	149	-14.2
ADediting_128173	chr1_54105899_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-11401	chr1	54105894	54105901	8mer-1a	54105883	54105901	144	-17.02
ADediting_128173	chr1_54105899_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-11401	chr1	54105894	54105901	8mer-1a	54105883	54105901	144	-17.02
ADediting_1520721	chr1_54101801_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4645-5p	chr1	54101799	54101805	7mer-m8	54101788	54101806	147	-14.25
ADediting_1520721	chr1_54101801_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4673	chr1	54101799	54101805	7mer-m8	54101782	54101806	149	-21.34
ADediting_1520722	chr1_54101874_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5008-5p	chr1	54101872	54101878	7mer-m8	54101857	54101879	164	-29.76
ADediting_1520723	chr1_54101896_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1299	chr1	54101890	54101896	7mer-m8	54101876	54101897	152	-17.1
ADediting_1520723	chr1_54101896_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-514a-5p	chr1	54101892	54101898	7mer-m8	54101879	54101899	154	-17.61
ADediting_1520723	chr1_54101896_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-518c-5p	chr1	54101891	54101897	7mer-m8	54101873	54101898	154	-21.06
ADediting_1520724	chr1_54104672_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5690	chr1	54104668	54104674	7mer-m8	54104655	54104675	145	-16.75
ADediting_1520726	chr1_54104694_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6770-3p	chr1	54104690	54104696	7mer-m8	54104676	54104697	154	-19.2

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_128078	chr1_54099489_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5089-5p	chr1	54099487	54099493	7mer-m8	54099475	54099494	142	-12.75
ADediting_128079	chr1_54099505_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-150-5p	chr1	54099499	54099505	7mer-m8	54099483	54099506	143	-15.33
ADediting_128080	chr1_54099515_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6747-3p	chr1	54099510	54099516	7mer-m8	54099496	54099517	150	-22.35
ADediting_128084	chr1_54099568_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6823-5p	chr1	54099566	54099572	7mer-m8	54099553	54099573	143	-17.8
ADediting_128090	chr1_54099593_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4735-5p	chr1	54099591	54099597	7mer-m8	54099577	54099598	140	-5.48
ADediting_128091	chr1_54099597_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3064-5p	chr1	54099596	54099602	7mer-1a	54099581	54099602	140	-17.59
ADediting_128091	chr1_54099597_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4735-5p	chr1	54099591	54099597	7mer-m8	54099577	54099598	140	-5.48
ADediting_128091	chr1_54099597_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4794	chr1	54099595	54099602	8mer-1a	54099581	54099602	140	-12.64
ADediting_128091	chr1_54099597_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-664a-5p	chr1	54099595	54099602	8mer-1a	54099579	54099602	141	-13.11
ADediting_128092	chr1_54099601_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3064-5p	chr1	54099596	54099602	7mer-1a	54099581	54099602	140	-17.59
ADediting_128092	chr1_54099601_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3126-3p	chr1	54099597	54099604	8mer-1a	54099583	54099604	140	-10.52
ADediting_128092	chr1_54099601_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4794	chr1	54099595	54099602	8mer-1a	54099581	54099602	140	-12.64
ADediting_128092	chr1_54099601_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-664a-5p	chr1	54099595	54099602	8mer-1a	54099579	54099602	141	-13.11
ADediting_128093	chr1_54099623_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-10399-5p	chr1	54099618	54099624	7mer-m8	54099601	54099625	145	-14.97
ADediting_128093	chr1_54099623_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6504-3p	chr1	54099618	54099624	7mer-m8	54099604	54099625	152	-14.32
ADediting_128093	chr1_54099623_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-7151-3p	chr1	54099616	54099623	8mer-1a	54099603	54099623	140	-12.24
ADediting_128094	chr1_54099624_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-10399-5p	chr1	54099618	54099624	7mer-m8	54099601	54099625	145	-14.97
ADediting_128094	chr1_54099624_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5089-5p	chr1	54099622	54099628	7mer-m8	54099609	54099629	144	-13.5
ADediting_128094	chr1_54099624_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6504-3p	chr1	54099618	54099624	7mer-m8	54099604	54099625	152	-14.32
ADediting_128095	chr1_54099629_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5089-5p	chr1	54099622	54099628	7mer-m8	54099609	54099629	144	-13.5
ADediting_128095	chr1_54099629_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6506-5p	chr1	54099623	54099629	7mer-m8	54099608	54099630	144	-16.19
ADediting_128096	chr1_54099633_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-562	chr1	54099629	54099635	7mer-m8	54099617	54099636	150	-12.74
ADediting_128096	chr1_54099633_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5697	chr1	54099630	54099636	7mer-m8	54099615	54099637	149	-18.32
ADediting_128097	chr1_54099640_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3614-3p	chr1	54099637	54099643	7mer-m8	54099620	54099644	152	-16.94
ADediting_128097	chr1_54099640_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4297	chr1	54099636	54099642	7mer-m8	54099625	54099643	141	-14.92
ADediting_128097	chr1_54099640_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5581-5p	chr1	54099636	54099642	7mer-m8	54099623	54099643	153	-27.12
ADediting_128098	chr1_54099646_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4777-3p	chr1	54099643	54099649	7mer-m8	54099625	54099650	147	-19.7
ADediting_128100	chr1_54099664_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-498-5p	chr1	54099658	54099664	7mer-m8	54099643	54099665	142	-12.51
ADediting_128101	chr1_54099665_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-498-5p	chr1	54099658	54099664	7mer-m8	54099643	54099665	142	-12.51
ADediting_128102	chr1_54099685_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1184	chr1	54099679	54099685	7mer-m8	54099666	54099686	146	-18.79
ADediting_128102	chr1_54099685_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4418	chr1	54099680	54099687	8mer-1a	54099670	54099687	144	-15.43
ADediting_128102	chr1_54099685_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-509-3-5p	chr1	54099680	54099687	8mer-1a	54099666	54099687	142	-17.73
ADediting_128102	chr1_54099685_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-509-5p	chr1	54099680	54099687	8mer-1a	54099667	54099687	142	-15.25
ADediting_128102	chr1_54099685_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-7156-3p	chr1	54099678	54099684	7mer-m8	54099663	54099685	143	-21.04
ADediting_128109	chr1_54099726_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3664-5p	chr1	54099723	54099729	7mer-m8	54099708	54099730	143	-15.23
ADediting_128109	chr1_54099726_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-367-5p	chr1	54099720	54099727	8mer-1a	54099706	54099727	143	-12.17
ADediting_128109	chr1_54099726_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-744-3p	chr1	54099719	54099725	7mer-m8	54099705	54099726	140	-14.79
ADediting_128110	chr1_54100225_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-431-5p	chr1	54100222	54100228	7mer-m8	54100208	54100229	143	-16.94
ADediting_128110	chr1_54100225_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5691	chr1	54100218	54100225	8mer-1a	54100205	54100225	147	-19.61
ADediting_128110	chr1_54100225_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6805-3p	chr1	54100218	54100225	8mer-1a	54100203	54100225	154	-21.17
ADediting_128111	chr1_54101674_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5586-3p	chr1	54101671	54101677	7mer-m8	54101657	54101678	154	-20.31
ADediting_128111	chr1_54101674_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-759	chr1	54101672	54101678	7mer-m8	54101659	54101679	143	-18.86
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-25-3p	chr1	54101701	54101707	7mer-m8	54101683	54101708	149	-20.43
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-32-5p	chr1	54101701	54101707	7mer-m8	54101689	54101708	149	-16.32
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-363-3p	chr1	54101701	54101707	7mer-m8	54101683	54101708	145	-16.38
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-367-3p	chr1	54101701	54101707	7mer-m8	54101687	54101708	150	-11.62
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-92a-3p	chr1	54101701	54101707	7mer-m8	54101684	54101708	150	-18.97
ADediting_128113	chr1_54101707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-92b-3p	chr1	54101701	54101707	7mer-m8	54101684	54101708	145	-17.4
ADediting_128115	chr1_54101722_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-17-3p	chr1	54101716	54101722	7mer-m8	54101701	54101723	155	-19.32
ADediting_128115	chr1_54101722_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-320a-3p	chr1	54101720	54101726	7mer-m8	54101706	54101727	155	-17.05
ADediting_128115	chr1_54101722_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-320b	chr1	54101720	54101726	7mer-m8	54101706	54101727	155	-17.05
ADediting_128115	chr1_54101722_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-320c	chr1	54101720	54101726	7mer-m8	54101708	54101727	155	-17.05
ADediting_128115	chr1_54101722_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-320d	chr1	54101720	54101726	7mer-m8	54101709	54101727	155	-17.18
ADediting_128115	chr1_54101722_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4429	chr1	54101720	54101726	7mer-m8	54101708	54101727	155	-17.22
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3689a-3p	chr1	54101729	54101735	7mer-m8	54101713	54101736	147	-21.84
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3689b-3p	chr1	54101729	54101735	7mer-m8	54101716	54101736	150	-23.58
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3689c	chr1	54101729	54101735	7mer-m8	54101716	54101736	150	-23.58
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-490-3p	chr1	54101733	54101739	7mer-m8	54101720	54101740	152	-19.69
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6779-5p	chr1	54101729	54101735	7mer-m8	54101717	54101736	143	-23.68
ADediting_128117	chr1_54101736_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6780a-5p	chr1	54101729	54101735	7mer-m8	54101716	54101736	154	-28.43
ADediting_128120	chr1_54101747_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3188	chr1	54101745	54101751	7mer-m8	54101731	54101752	147	-22.58
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-let-7f-5p	chr1	54101752	54101759	8mer-1a	54101737	54101759	153	-17.28
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-let-7g-5p	chr1	54101752	54101759	8mer-1a	54101737	54101759	155	-18.9
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4266	chr1	54101748	54101754	7mer-m8	54101741	54101755	151	-16.67
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4458	chr1	54101752	54101759	8mer-1a	54101741	54101759	147	-17.72
ADediting_128121	chr1_54101755_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4500	chr1	54101752	54101759	8mer-1a	54101743	54101759	150	-15.01
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-12126	chr1	54101765	54101771	7mer-m8	54101748	54101772	142	-12.03
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1273h-5p	chr1	54101762	54101769	8mer-1a	54101748	54101769	146	-18.98
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-30b-3p	chr1	54101762	54101769	8mer-1a	54101747	54101769	150	-15.07
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3614-5p	chr1	54101766	54101772	7mer-m8	54101749	54101773	143	-16.09
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3689a-3p	chr1	54101762	54101769	8mer-1a	54101748	54101769	154	-19
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3689b-3p	chr1	54101762	54101769	8mer-1a	54101748	54101769	154	-19.05
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3689c	chr1	54101762	54101769	8mer-1a	54101748	54101769	154	-19.05
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6779-5p	chr1	54101762	54101769	8mer-1a	54101750	54101769	145	-20.69
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6780a-5p	chr1	54101762	54101769	8mer-1a	54101748	54101769	143	-21.91
ADediting_128122	chr1_54101769_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-887-5p	chr1	54101763	54101769	7mer-m8	54101750	54101770	149	-17.54
ADediting_128123	chr1_54101770_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-12126	chr1	54101765	54101771	7mer-m8	54101748	54101772	142	-12.03
ADediting_128123	chr1_54101770_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3614-5p	chr1	54101766	54101772	7mer-m8	54101749	54101773	143	-16.09
ADediting_128123	chr1_54101770_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-887-5p	chr1	54101763	54101769	7mer-m8	54101750	54101770	149	-17.54
ADediting_128127	chr1_54101820_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4794	chr1	54101818	54101825	8mer-1a	54101805	54101825	141	-12.57
ADediting_128128	chr1_54101844_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4293	chr1	54101841	54101847	7mer-m8	54101831	54101848	144	-13.48
ADediting_128129	chr1_54101869_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1304-5p	chr1	54101863	54101869	7mer-m8	54101846	54101870	154	-19.81
ADediting_128130	chr1_54101870_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1304-5p	chr1	54101863	54101869	7mer-m8	54101846	54101870	154	-19.81
ADediting_128133	chr1_54101911_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6514-3p	chr1	54101908	54101914	7mer-m8	54101895	54101915	155	-17.54
ADediting_128134	chr1_54101915_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6514-3p	chr1	54101908	54101914	7mer-m8	54101895	54101915	155	-17.54
ADediting_128135	chr1_54104581_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1262	chr1	54104578	54104584	7mer-m8	54104564	54104585	140	-14.31
ADediting_128135	chr1_54104581_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4701-3p	chr1	54104578	54104584	7mer-m8	54104566	54104585	148	-16.38
ADediting_128135	chr1_54104581_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-542-3p	chr1	54104575	54104581	7mer-m8	54104558	54104582	151	-17.82
ADediting_128135	chr1_54104581_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6736-5p	chr1	54104578	54104584	7mer-m8	54104563	54104585	145	-21.84
ADediting_128135	chr1_54104581_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6776-5p	chr1	54104579	54104585	7mer-m8	54104567	54104586	149	-21.22
ADediting_128136	chr1_54104603_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1227-3p	chr1	54104597	54104603	7mer-m8	54104585	54104604	148	-17.72
ADediting_128136	chr1_54104603_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3085-5p	chr1	54104598	54104605	8mer-1a	54104583	54104605	154	-24.24
ADediting_128138	chr1_54104622_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-377-5p	chr1	54104619	54104625	7mer-m8	54104603	54104626	150	-20.02
ADediting_128138	chr1_54104622_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6086	chr1	54104619	54104625	7mer-m8	54104607	54104626	150	-21.06
ADediting_128138	chr1_54104622_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6516-5p	chr1	54104615	54104621	7mer-m8	54104600	54104622	149	-15.16
ADediting_128141	chr1_54104659_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4478	chr1	54104656	54104662	7mer-m8	54104648	54104663	149	-25.05
ADediting_128141	chr1_54104659_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4649-3p	chr1	54104653	54104659	7mer-m8	54104640	54104660	140	-14.11
ADediting_128141	chr1_54104659_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-7160-5p	chr1	54104654	54104660	7mer-m8	54104641	54104661	146	-17.87
ADediting_128142	chr1_54104671_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-935	chr1	54104668	54104674	7mer-m8	54104652	54104675	141	-18.15
ADediting_128144	chr1_54104703_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1207-3p	chr1	54104700	54104707	8mer-1a	54104690	54104707	144	-14.68
ADediting_128144	chr1_54104703_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1285-3p	chr1	54104697	54104703	7mer-m8	54104683	54104704	140	-16.01
ADediting_128144	chr1_54104703_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3187-5p	chr1	54104697	54104703	7mer-m8	54104677	54104704	152	-25.55
ADediting_128144	chr1_54104703_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5189-5p	chr1	54104697	54104703	7mer-m8	54104679	54104704	149	-24.02
ADediting_128144	chr1_54104703_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-612	chr1	54104697	54104703	7mer-m8	54104680	54104704	147	-25.88
ADediting_128144	chr1_54104703_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6860	chr1	54104697	54104703	7mer-m8	54104682	54104704	150	-20.88
ADediting_128146	chr1_54104725_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3675-3p	chr1	54104723	54104729	7mer-m8	54104709	54104730	145	-12.58
ADediting_128147	chr1_54104756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-7844-5p	chr1	54104753	54104759	7mer-m8	54104735	54104760	147	-18.01
ADediting_128148	chr1_54104777_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1304-5p	chr1	54104770	54104776	7mer-m8	54104756	54104777	149	-16.98
ADediting_128149	chr1_54104780_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1269a	chr1	54104778	54104784	7mer-m8	54104764	54104785	142	-14.97
ADediting_128149	chr1_54104780_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1269b	chr1	54104778	54104784	7mer-m8	54104764	54104785	146	-15.4
ADediting_128149	chr1_54104780_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1288-3p	chr1	54104777	54104784	8mer-1a	54104764	54104784	148	-21.45
ADediting_128150	chr1_54104785_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1269a	chr1	54104778	54104784	7mer-m8	54104764	54104785	142	-14.97
ADediting_128150	chr1_54104785_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1269b	chr1	54104778	54104784	7mer-m8	54104764	54104785	146	-15.4
ADediting_128150	chr1_54104785_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3665	chr1	54104783	54104789	7mer-m8	54104773	54104790	142	-16.14
ADediting_128150	chr1_54104785_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-8071	chr1	54104780	54104786	7mer-m8	54104769	54104787	151	-22.2
ADediting_128151	chr1_54104794_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4649-3p	chr1	54104788	54104794	7mer-m8	54104775	54104795	140	-15.87
ADediting_128151	chr1_54104794_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-7160-5p	chr1	54104789	54104795	7mer-m8	54104774	54104796	149	-23.92
ADediting_128156	chr1_54105701_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6807-5p	chr1	54105694	54105700	7mer-m8	54105680	54105701	141	-17.43
ADediting_128156	chr1_54105701_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6807-5p	chr1	54105694	54105700	7mer-m8	54105680	54105701	141	-17.43
ADediting_128157	chr1_54105706_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-377-5p	chr1	54105704	54105710	7mer-m8	54105690	54105711	155	-19.35
ADediting_128157	chr1_54105706_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6086	chr1	54105704	54105710	7mer-m8	54105692	54105711	148	-19
ADediting_128157	chr1_54105706_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6516-5p	chr1	54105700	54105706	7mer-m8	54105684	54105707	147	-16.38
ADediting_128157	chr1_54105706_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-377-5p	chr1	54105704	54105710	7mer-m8	54105690	54105711	155	-19.35
ADediting_128157	chr1_54105706_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6086	chr1	54105704	54105710	7mer-m8	54105692	54105711	148	-19
ADediting_128157	chr1_54105706_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6516-5p	chr1	54105700	54105706	7mer-m8	54105684	54105707	147	-16.38
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-377-5p	chr1	54105704	54105710	7mer-m8	54105690	54105711	155	-19.35
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6086	chr1	54105704	54105710	7mer-m8	54105692	54105711	148	-19
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6516-5p	chr1	54105700	54105706	7mer-m8	54105684	54105707	147	-16.38
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-377-5p	chr1	54105704	54105710	7mer-m8	54105690	54105711	155	-19.35
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6086	chr1	54105704	54105710	7mer-m8	54105692	54105711	148	-19
ADediting_128158	chr1_54105707_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6516-5p	chr1	54105700	54105706	7mer-m8	54105684	54105707	147	-16.38
ADediting_128161	chr1_54105756_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5690	chr1	54105753	54105759	7mer-m8	54105740	54105760	145	-16.75
ADediting_128161	chr1_54105756_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-5690	chr1	54105753	54105759	7mer-m8	54105740	54105760	145	-16.75
ADediting_128164	chr1_54105783_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5589-5p	chr1	54105778	54105784	7mer-m8	54105767	54105785	151	-20.45
ADediting_128164	chr1_54105783_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6776-5p	chr1	54105777	54105783	7mer-m8	54105766	54105784	154	-21.9
ADediting_128164	chr1_54105783_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-5589-5p	chr1	54105778	54105784	7mer-m8	54105767	54105785	151	-20.45
ADediting_128164	chr1_54105783_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6776-5p	chr1	54105777	54105783	7mer-m8	54105766	54105784	154	-21.9
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-520f-5p	chr1	54105798	54105805	8mer-1a	54105784	54105805	152	-9.49
ADediting_128165	chr1_54105802_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-520f-5p	chr1	54105798	54105805	8mer-1a	54105784	54105805	152	-9.49
ADediting_128166	chr1_54105804_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-520f-5p	chr1	54105798	54105805	8mer-1a	54105784	54105805	152	-9.49
ADediting_128166	chr1_54105804_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6873-3p	chr1	54105801	54105807	7mer-m8	54105786	54105808	141	-10.64
ADediting_128166	chr1_54105804_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-520f-5p	chr1	54105798	54105805	8mer-1a	54105784	54105805	152	-9.49
ADediting_128166	chr1_54105804_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6873-3p	chr1	54105801	54105807	7mer-m8	54105786	54105808	141	-10.64
ADediting_128167	chr1_54105806_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-216b-5p	chr1	54105803	54105809	7mer-m8	54105791	54105810	148	-7.6
ADediting_128167	chr1_54105806_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-6873-3p	chr1	54105801	54105807	7mer-m8	54105786	54105808	141	-10.64
ADediting_128167	chr1_54105806_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-216b-5p	chr1	54105803	54105809	7mer-m8	54105791	54105810	148	-7.6
ADediting_128167	chr1_54105806_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-6873-3p	chr1	54105801	54105807	7mer-m8	54105786	54105808	141	-10.64
ADediting_128169	chr1_54105830_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-3190-5p	chr1	54105824	54105830	7mer-m8	54105812	54105831	147	-18.34
ADediting_128169	chr1_54105830_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-548s	chr1	54105823	54105829	7mer-m8	54105809	54105830	143	-12.53
ADediting_128169	chr1_54105830_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-3190-5p	chr1	54105824	54105830	7mer-m8	54105812	54105831	147	-18.34
ADediting_128169	chr1_54105830_+	ENSG00000116205.14	ENST00000391366.3	TCEANC2-203	hsa-miR-548s	chr1	54105823	54105829	7mer-m8	54105809	54105830	143	-12.53
ADediting_1520719	chr1_54101712_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-1537-5p	chr1	54101707	54101713	7mer-m8	54101692	54101714	154	-18.29
ADediting_1520722	chr1_54101874_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-2467-5p	chr1	54101872	54101878	7mer-m8	54101856	54101879	155	-18.67
ADediting_1520722	chr1_54101874_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-4284	chr1	54101870	54101876	7mer-m8	54101860	54101877	148	-15.24
ADediting_1520724	chr1_54104672_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-935	chr1	54104668	54104674	7mer-m8	54104652	54104675	141	-18.15
ADediting_1520725	chr1_54104687_+	ENSG00000116205.14	ENST00000234827.6	TCEANC2-201	hsa-miR-5589-3p	chr1	54104685	54104691	7mer-m8	54104666	54104692	151	-18.41

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1520727

chr1_54112281_+

ENSG00000116205.14

ENST00000498272.1

TCEANC2-204

hsa-miR-1245a

chr1

54112277

54112283

7mer-m8

54112264

54112284

149

-17.3

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1097295

chr3_85385762_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-5688

chr1

54105077

54105083

7mer-m8

54105059

54105084

146

-15.32

ADediting_1097295

chr3_85385762_+

ENSG00000116205.14

ENST00000391366.3

TCEANC2-203

hsa-miR-5688

chr1

54105077

54105083

7mer-m8

54105059

54105084

146

-15.32

ADediting_1391023

chr8_140732605_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-151a-3p

chr1

54104778

54104784

7mer-m8

54104765

54104785

140

-21.48

ADediting_1471003

chr9_63819626_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-4477b

chr1

54105292

54105298

7mer-m8

54105278

54105299

149

-12.19

ADediting_1471003

chr9_63819626_+

ENSG00000116205.14

ENST00000391366.3

TCEANC2-203

hsa-miR-4477b

chr1

54105292

54105298

7mer-m8

54105278

54105299

149

-12.19

ADediting_1535951

chr14_100874558_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-337-3p

chr1

54102320

54102326

7mer-m8

54102307

54102327

149

-13.54

ADediting_1535951

chr14_100874558_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-337-3p

chr1

54103925

54103931

7mer-m8

54103911

54103932

156

-20.07

ADediting_286380

chr11_79422188_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-5579-3p

chr1

54099686

54099693

8mer-1a

54099670

54099693

144

-19.85

ADediting_843620

chr2_207754818_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-4775

chr1

54101494

54101500

7mer-m8

54101480

54101501

142

-6.52

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1097295

chr3_85385762_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-5688

chr1

54101240

54101247

8mer-1a

54101226

54101247

140

-15.9

ADediting_1337757

chr7_5495852_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-589-3p

chr1

54098616

54098622

7mer-m8

54098599

54098623

153

-13.14

ADediting_1337757

chr7_5495852_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-589-3p

chr1

54101062

54101068

7mer-m8

54101046

54101069

142

-12.32

ADediting_1535951

chr14_100874558_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-337-3p

chr1

54103054

54103060

7mer-m8

54103040

54103061

142

-15.04

ADediting_1556067

chr19_40282625_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-641

chr1

54098184

54098190

7mer-m8

54098168

54098191

146

-9.8

ADediting_1556067

chr19_40282625_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-641

chr1

54099843

54099850

8mer-1a

54099827

54099850

145

-15.03

ADediting_1631458

chr19_40282624_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-641

chr1

54098184

54098190

7mer-m8

54098168

54098191

146

-9.8

ADediting_1631458

chr19_40282624_-

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-641

chr1

54099843

54099850

8mer-1a

54099827

54099850

145

-15.03

ADediting_843620

chr2_207754818_+

ENSG00000116205.14

ENST00000234827.6

TCEANC2-201

hsa-miR-4775

chr1

54098835

54098842

8mer-1a

54098819

54098842

150

-9.09

Differentially expressed gene-miRNA network

Differentially expressed mRNA-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TCEANC2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000498272.1	lncRNA
ENST00000234827.6	protein_coding
ENST00000391366.3	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_128075	ENST00000234827.6	chr1_54099480_+	3827	-3729.90	-3730.30	-3813.20
ADediting_128076	ENST00000234827.6	chr1_54099486_+	3833	-3730.30	-3730.30	-3813.20
ADediting_128077	ENST00000234827.6	chr1_54099488_+	3835	-3730.40	-3730.30	-3813.20
ADediting_128078	ENST00000234827.6	chr1_54099489_+	3836	-3730.30	-3730.30	-3813.20
ADediting_128079	ENST00000234827.6	chr1_54099505_+	3852	-3729.40	-3730.30	-3813.20
ADediting_128080	ENST00000234827.6	chr1_54099515_+	3862	-3732.30	-3730.30	-3813.20
ADediting_128081	ENST00000234827.6	chr1_54099521_+	3868	-3729.70	-3730.30	-3813.20
ADediting_128082	ENST00000234827.6	chr1_54099534_+	3881	-3729.50	-3730.30	-3813.20
ADediting_128083	ENST00000234827.6	chr1_54099545_+	3892	-3730.60	-3730.30	-3813.20
ADediting_128084	ENST00000234827.6	chr1_54099568_+	3915	-3730.30	-3730.30	-3813.20
ADediting_128085	ENST00000234827.6	chr1_54099582_+	3929	-3730.40	-3730.30	-3813.20
ADediting_128086	ENST00000234827.6	chr1_54099583_+	3930	-3730.40	-3730.30	-3813.20
ADediting_128087	ENST00000234827.6	chr1_54099584_+	3931	-3730.40	-3730.30	-3813.20
ADediting_128088	ENST00000234827.6	chr1_54099591_+	3938	-3730.40	-3730.30	-3813.20
ADediting_128089	ENST00000234827.6	chr1_54099592_+	3939	-3730.40	-3730.30	-3813.20
ADediting_128090	ENST00000234827.6	chr1_54099593_+	3940	-3730.40	-3730.30	-3813.20
ADediting_128091	ENST00000234827.6	chr1_54099597_+	3944	-3730.00	-3730.30	-3813.20
ADediting_128092	ENST00000234827.6	chr1_54099601_+	3948	-3734.20	-3730.30	-3813.20
ADediting_128093	ENST00000234827.6	chr1_54099623_+	3970	-3730.00	-3730.30	-3813.20
ADediting_128094	ENST00000234827.6	chr1_54099624_+	3971	-3736.50	-3730.30	-3813.20
ADediting_128095	ENST00000234827.6	chr1_54099629_+	3976	-3729.60	-3730.30	-3813.20
ADediting_128096	ENST00000234827.6	chr1_54099633_+	3980	-3730.30	-3730.30	-3813.20
ADediting_128097	ENST00000234827.6	chr1_54099640_+	3987	-3730.30	-3730.30	-3813.20
ADediting_128098	ENST00000234827.6	chr1_54099646_+	3993	-3729.40	-3730.30	-3813.20
ADediting_1520718	ENST00000234827.6	chr1_54099653_+	4000	-3729.40	-3730.30	-3813.20
ADediting_128099	ENST00000234827.6	chr1_54099656_+	4003	-3730.30	-3730.30	-3813.20
ADediting_128100	ENST00000234827.6	chr1_54099664_+	4011	-3729.80	-3730.30	-3813.20
ADediting_128101	ENST00000234827.6	chr1_54099665_+	4012	-3730.30	-3730.30	-3813.20
ADediting_128102	ENST00000234827.6	chr1_54099685_+	4032	-3729.60	-3730.30	-3813.20
ADediting_128103	ENST00000234827.6	chr1_54099688_+	4035	-3736.70	-3730.30	-3813.20
ADediting_128104	ENST00000234827.6	chr1_54099689_+	4036	-3730.30	-3730.30	-3813.20
ADediting_128105	ENST00000234827.6	chr1_54099693_+	4040	-3730.00	-3730.30	-3813.20
ADediting_128106	ENST00000234827.6	chr1_54099694_+	4041	-3730.00	-3730.30	-3813.20
ADediting_128107	ENST00000234827.6	chr1_54099701_+	4048	-3736.30	-3730.30	-3813.20
ADediting_128108	ENST00000234827.6	chr1_54099709_+	4056	-3729.90	-3730.30	-3813.20
ADediting_128109	ENST00000234827.6	chr1_54099726_+	4073	-3736.50	-3730.30	-3813.20
ADediting_128110	ENST00000234827.6	chr1_54100225_+	4572	-3731.20	-3730.30	-3813.20
ADediting_128111	ENST00000234827.6	chr1_54101674_+	6021	-3730.60	-3730.30	-3813.20
ADediting_128112	ENST00000234827.6	chr1_54101696_+	6043	-3734.70	-3730.30	-3813.20
ADediting_128113	ENST00000234827.6	chr1_54101707_+	6054	-3730.30	-3730.30	-3813.20
ADediting_1520719	ENST00000234827.6	chr1_54101712_+	6059	-3732.90	-3730.30	-3813.20
ADediting_128114	ENST00000234827.6	chr1_54101717_+	6064	-3730.60	-3730.30	-3813.20
ADediting_128115	ENST00000234827.6	chr1_54101722_+	6069	-3729.60	-3730.30	-3813.20
ADediting_128116	ENST00000234827.6	chr1_54101729_+	6076	-3731.20	-3730.30	-3813.20
ADediting_128117	ENST00000234827.6	chr1_54101736_+	6083	-3731.60	-3730.30	-3813.20
ADediting_1520720	ENST00000234827.6	chr1_54101742_+	6089	-3730.00	-3730.30	-3813.20
ADediting_128118	ENST00000234827.6	chr1_54101743_+	6090	-3730.20	-3730.30	-3813.20
ADediting_128119	ENST00000234827.6	chr1_54101746_+	6093	-3730.10	-3730.30	-3813.20
ADediting_128120	ENST00000234827.6	chr1_54101747_+	6094	-3730.30	-3730.30	-3813.20
ADediting_128121	ENST00000234827.6	chr1_54101755_+	6102	-3733.80	-3730.30	-3813.20
ADediting_128122	ENST00000234827.6	chr1_54101769_+	6116	-3729.60	-3730.30	-3813.20
ADediting_128123	ENST00000234827.6	chr1_54101770_+	6117	-3733.20	-3730.30	-3813.20
ADediting_128124	ENST00000234827.6	chr1_54101783_+	6130	-3730.30	-3730.30	-3813.20
ADediting_128125	ENST00000234827.6	chr1_54101785_+	6132	-3731.30	-3730.30	-3813.20
ADediting_128126	ENST00000234827.6	chr1_54101789_+	6136	-3730.30	-3730.30	-3813.20
ADediting_1520721	ENST00000234827.6	chr1_54101801_+	6148	-3730.30	-3730.30	-3813.20
ADediting_128127	ENST00000234827.6	chr1_54101820_+	6167	-3729.00	-3730.30	-3813.20
ADediting_128128	ENST00000234827.6	chr1_54101844_+	6191	-3730.20	-3730.30	-3813.20
ADediting_128129	ENST00000234827.6	chr1_54101869_+	6216	-3730.20	-3730.30	-3813.20
ADediting_128130	ENST00000234827.6	chr1_54101870_+	6217	-3730.30	-3730.30	-3813.20
ADediting_1520722	ENST00000234827.6	chr1_54101874_+	6221	-3730.30	-3730.30	-3813.20
ADediting_1520723	ENST00000234827.6	chr1_54101896_+	6243	-3730.00	-3730.30	-3813.20
ADediting_128131	ENST00000234827.6	chr1_54101897_+	6244	-3731.10	-3730.30	-3813.20
ADediting_128132	ENST00000234827.6	chr1_54101909_+	6256	-3730.80	-3730.30	-3813.20
ADediting_128133	ENST00000234827.6	chr1_54101911_+	6258	-3729.60	-3730.30	-3813.20
ADediting_128134	ENST00000234827.6	chr1_54101915_+	6262	-3729.60	-3730.30	-3813.20
ADediting_128135	ENST00000234827.6	chr1_54104581_+	8928	-3735.70	-3730.30	-3813.20
ADediting_128136	ENST00000234827.6	chr1_54104603_+	8950	-3735.70	-3730.30	-3813.20
ADediting_128137	ENST00000234827.6	chr1_54104616_+	8963	-3729.90	-3730.30	-3813.20
ADediting_128138	ENST00000234827.6	chr1_54104622_+	8969	-3730.30	-3730.30	-3813.20
ADediting_128139	ENST00000234827.6	chr1_54104642_+	8989	-3730.00	-3730.30	-3813.20
ADediting_128140	ENST00000234827.6	chr1_54104646_+	8993	-3730.70	-3730.30	-3813.20
ADediting_128141	ENST00000234827.6	chr1_54104659_+	9006	-3729.60	-3730.30	-3813.20
ADediting_128142	ENST00000234827.6	chr1_54104671_+	9018	-3735.00	-3730.30	-3813.20
ADediting_1520724	ENST00000234827.6	chr1_54104672_+	9019	-3735.00	-3730.30	-3813.20
ADediting_128143	ENST00000234827.6	chr1_54104681_+	9028	-3730.30	-3730.30	-3813.20
ADediting_1520725	ENST00000234827.6	chr1_54104687_+	9034	-3735.40	-3730.30	-3813.20
ADediting_1520726	ENST00000234827.6	chr1_54104694_+	9041	-3729.90	-3730.30	-3813.20
ADediting_128144	ENST00000234827.6	chr1_54104703_+	9050	-3733.80	-3730.30	-3813.20
ADediting_128145	ENST00000234827.6	chr1_54104722_+	9069	-3730.00	-3730.30	-3813.20
ADediting_128146	ENST00000234827.6	chr1_54104725_+	9072	-3730.00	-3730.30	-3813.20
ADediting_128147	ENST00000234827.6	chr1_54104756_+	9103	-3736.30	-3730.30	-3813.20
ADediting_128148	ENST00000234827.6	chr1_54104777_+	9124	-3730.00	-3730.30	-3813.20
ADediting_128149	ENST00000234827.6	chr1_54104780_+	9127	-3734.10	-3730.30	-3813.20
ADediting_128150	ENST00000234827.6	chr1_54104785_+	9132	-3735.70	-3730.30	-3813.20
ADediting_128151	ENST00000234827.6	chr1_54104794_+	9141	-3729.60	-3730.30	-3813.20
ADediting_128152	ENST00000234827.6	chr1_54104804_+	9151	-3730.00	-3730.30	-3813.20
ADediting_128153	ENST00000234827.6	chr1_54104816_+	9163	-3730.00	-3730.30	-3813.20
ADediting_128154	ENST00000234827.6	chr1_54104818_+	9165	-3730.30	-3730.30	-3813.20
ADediting_128155	ENST00000234827.6	chr1_54105691_+	10038	-3729.80	-3730.30	-3813.20
ADediting_128156	ENST00000234827.6	chr1_54105701_+	10048	-3730.60	-3730.30	-3813.20
ADediting_128157	ENST00000234827.6	chr1_54105706_+	10053	-3729.60	-3730.30	-3813.20
ADediting_128158	ENST00000234827.6	chr1_54105707_+	10054	-3737.00	-3730.30	-3813.20
ADediting_128159	ENST00000234827.6	chr1_54105726_+	10073	-3730.00	-3730.30	-3813.20
ADediting_128160	ENST00000234827.6	chr1_54105727_+	10074	-3730.00	-3730.30	-3813.20
ADediting_128161	ENST00000234827.6	chr1_54105756_+	10103	-3730.00	-3730.30	-3813.20
ADediting_128162	ENST00000234827.6	chr1_54105766_+	10113	-3732.50	-3730.30	-3813.20
ADediting_128163	ENST00000234827.6	chr1_54105774_+	10121	-3734.60	-3730.30	-3813.20
ADediting_128164	ENST00000234827.6	chr1_54105783_+	10130	-3734.20	-3730.30	-3813.20
ADediting_128165	ENST00000234827.6	chr1_54105802_+	10149	-3730.00	-3730.30	-3813.20
ADediting_128166	ENST00000234827.6	chr1_54105804_+	10151	-3729.60	-3730.30	-3813.20
ADediting_128167	ENST00000234827.6	chr1_54105806_+	10153	-3730.30	-3730.30	-3813.20
ADediting_128168	ENST00000234827.6	chr1_54105818_+	10165	-3735.70	-3730.30	-3813.20
ADediting_128169	ENST00000234827.6	chr1_54105830_+	10177	-3729.60	-3730.30	-3813.20
ADediting_128170	ENST00000234827.6	chr1_54105881_+	10228	-3730.00	-3730.30	-3813.20
ADediting_128171	ENST00000234827.6	chr1_54105893_+	10240	-3730.30	-3730.30	-3813.20
ADediting_128172	ENST00000234827.6	chr1_54105895_+	10242	-3730.00	-3730.30	-3813.20
ADediting_128173	ENST00000234827.6	chr1_54105899_+	10246	-3729.90	-3730.30	-3813.20
ADediting_128135	ENST00000391366.3	chr1_54104581_+	287	-589.50	-589.20	-638.90
ADediting_128136	ENST00000391366.3	chr1_54104603_+	309	-593.40	-589.20	-638.90
ADediting_128137	ENST00000391366.3	chr1_54104616_+	322	-588.80	-589.20	-638.90
ADediting_128138	ENST00000391366.3	chr1_54104622_+	328	-589.20	-589.20	-638.90
ADediting_128139	ENST00000391366.3	chr1_54104642_+	348	-591.90	-589.20	-638.90
ADediting_128140	ENST00000391366.3	chr1_54104646_+	352	-592.60	-589.20	-638.90
ADediting_128141	ENST00000391366.3	chr1_54104659_+	365	-589.10	-589.20	-638.90
ADediting_128142	ENST00000391366.3	chr1_54104671_+	377	-592.90	-589.20	-638.90
ADediting_1520724	ENST00000391366.3	chr1_54104672_+	378	-592.50	-589.20	-638.90
ADediting_128143	ENST00000391366.3	chr1_54104681_+	387	-592.40	-589.20	-638.90
ADediting_1520725	ENST00000391366.3	chr1_54104687_+	393	-589.50	-589.20	-638.90
ADediting_1520726	ENST00000391366.3	chr1_54104694_+	400	-590.20	-589.20	-638.90
ADediting_128144	ENST00000391366.3	chr1_54104703_+	409	-591.90	-589.20	-638.90
ADediting_128145	ENST00000391366.3	chr1_54104722_+	428	-592.50	-589.20	-638.90
ADediting_128146	ENST00000391366.3	chr1_54104725_+	431	-589.70	-589.20	-638.90
ADediting_128147	ENST00000391366.3	chr1_54104756_+	462	-589.20	-589.20	-638.90
ADediting_128148	ENST00000391366.3	chr1_54104777_+	483	-593.00	-589.20	-638.90
ADediting_128149	ENST00000391366.3	chr1_54104780_+	486	-591.10	-589.20	-638.90
ADediting_128150	ENST00000391366.3	chr1_54104785_+	491	-589.20	-589.20	-638.90
ADediting_128151	ENST00000391366.3	chr1_54104794_+	500	-590.00	-589.20	-638.90
ADediting_128152	ENST00000391366.3	chr1_54104804_+	510	-590.00	-589.20	-638.90
ADediting_128153	ENST00000391366.3	chr1_54104816_+	522	-591.70	-589.20	-638.90
ADediting_128154	ENST00000391366.3	chr1_54104818_+	524	-590.00	-589.20	-638.90
ADediting_128155	ENST00000391366.3	chr1_54105691_+	1397	-589.20	-589.20	-638.90
ADediting_128156	ENST00000391366.3	chr1_54105701_+	1407	-588.80	-589.20	-638.90
ADediting_128157	ENST00000391366.3	chr1_54105706_+	1412	-588.50	-589.20	-638.90
ADediting_128158	ENST00000391366.3	chr1_54105707_+	1413	-589.20	-589.20	-638.90
ADediting_128159	ENST00000391366.3	chr1_54105726_+	1432	-589.10	-589.20	-638.90
ADediting_128160	ENST00000391366.3	chr1_54105727_+	1433	-589.50	-589.20	-638.90
ADediting_128161	ENST00000391366.3	chr1_54105756_+	1462	-592.30	-589.20	-638.90
ADediting_128162	ENST00000391366.3	chr1_54105766_+	1472	-589.70	-589.20	-638.90
ADediting_128163	ENST00000391366.3	chr1_54105774_+	1480	-589.20	-589.20	-638.90
ADediting_128164	ENST00000391366.3	chr1_54105783_+	1489	-588.50	-589.20	-638.90
ADediting_128165	ENST00000391366.3	chr1_54105802_+	1508	-588.80	-589.20	-638.90
ADediting_128166	ENST00000391366.3	chr1_54105804_+	1510	-588.60	-589.20	-638.90
ADediting_128167	ENST00000391366.3	chr1_54105806_+	1512	-588.30	-589.20	-638.90
ADediting_128168	ENST00000391366.3	chr1_54105818_+	1524	-588.90	-589.20	-638.90
ADediting_128169	ENST00000391366.3	chr1_54105830_+	1536	-595.40	-589.20	-638.90
ADediting_128170	ENST00000391366.3	chr1_54105881_+	1587	-594.40	-589.20	-638.90
ADediting_128171	ENST00000391366.3	chr1_54105893_+	1599	-592.90	-589.20	-638.90
ADediting_128172	ENST00000391366.3	chr1_54105895_+	1601	-593.40	-589.20	-638.90
ADediting_128173	ENST00000391366.3	chr1_54105899_+	1605	-592.60	-589.20	-638.90

RNA A-to-I editing in lncRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1520727	ENST00000498272.1	chr1_54112281_+	2300	-863.60	-864.00	-863.60

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Relation with ADAR for TCEANC2

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	ADediting_128109	chr1_54099726_+	0.776817044989495	0.0161642269308647	0.454025757501256	-0.042677488217849	2.4983072400124e-09	0.330374477918086
TCX	ADediting_128111	chr1_54101674_+	0.48425195798248	-0.0575463709686673	0.00113070559284279	-0.263330484942544	5.97165342874118e-06	0.360188342035112
TCX	ADediting_128112	chr1_54101696_+	0.93645375972533	-0.0065645923912338	0.00252995894822375	-0.244844439693008	1.47813416089317e-06	0.381310527205571
TCX	ADediting_128114	chr1_54101717_+	0.342894200950236	-0.0779759309143236	0.000201578243116583	-0.299021711395898	4.02204770431767e-06	0.366320168596061
TCX	ADediting_128117	chr1_54101736_+	0.413755031083867	-0.067219347328141	6.82406242371652e-05	-0.319275482573306	3.19612238948331e-07	0.40289588981824
CER	ADediting_128121	chr1_54101755_+	0.1722506726551	0.112038416238659	0.204217440889899	0.104254029262598	9.83974910422714e-05	0.312594131409945
TCX	ADediting_128136	chr1_54104603_+	0.0522177260461214	-0.15883028120284	0.00167381999734827	-0.254492986579189	8.74633989509623e-05	0.31476190203617
DLPFC	ADediting_128144	chr1_54104703_+	0.422619100160453	0.0457048764341621	0.748197665469536	0.0183049483927285	3.59330331298504e-08	0.30660288804127

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	4.37315221497992e-05	0.22992762230599	0.466063217850993	0.0415486688699636	2.71912522593419e-52	0.727348655616058
AC	1.08868325631124e-45	0.746033719859659	3.73664153271248e-31	0.647932504303304	6.88459479636208e-21	0.546733603153693
PCC	2.03246104793629e-13	0.498969703690211	5.85855229780611e-14	0.508574652479103	2.22884724705973e-06	0.334632865325912
CER	2.3953822617471e-05	0.337567752494286	0.00350006245755112	0.236995136752814	6.92898852689804e-07	0.392181059184778
TCX	0.0208640055971732	0.188528541361186	0.00220941137301429	-0.248049359552738	6.42524941166909e-23	0.694538748015349
FP	5.4243774152762e-16	0.55856478330602	3.48360345320303e-07	0.37081081944216	3.29011543031165e-12	0.491399368492095
IFG	0.0251886534715781	0.446690172297177	0.0954543803329232	0.340839431980537	0.00589351739037585	0.534681917240633
PG	2.52254055053175e-30	0.714220924774293	9.71996641364721e-11	0.45170212563457	0.0106364724625535	0.186905687095526
STG	0.00029569865098984	0.385282790614741	0.00728559262700051	0.2907949321249	2.7372851343792e-07	0.526203699807035

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Relation with AD stages for TCEANC2

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
TCX	ADediting_128093	chr1_54099623_+	0.00108597731487037	0.31303958373446
TCX	ADediting_128109	chr1_54099726_+	0.000766213798878364	-0.321883886156818
TCX	ADediting_128171	chr1_54105893_+	0.000838369388766738	-0.319627197130372

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
CER	0.000641451379294495	0.323352116973329
TCX	0.00163172202490758	0.302362083870225

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RelatedDrugs for TCEANC2

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TCEANC2

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Gene summary for TCEANC2

RNA A-to-I events for TCEANC2

RNA editing positional annotations for TCEANC2 using Annovar

RNA A-to-I editing events in the alternative splicing sites for TCEANC2

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCEANC2

Protein coding region RNA A-to-I editings for TCEANC2

The effects of the RNA editing to the miRNA binding sites for TCEANC2

The effects of the RNA editing to the stability of the RNA structures for TCEANC2

Relation with ADAR for TCEANC2

Relation with AD stages for TCEANC2

RelatedDrugs for TCEANC2

RelatedDiseases for TCEANC2

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene