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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CNTN1 |
 Gene summary |
| Gene information | Gene symbol | CNTN1 | Gene ID | 1272 |
| Gene name | contactin 1 | |
| Synonyms | F3|GP135|MYPCN | |
| Cytomap | 12q12 | |
| Type of gene | protein-coding | |
| Description | contactin-1glycoprotein gP135neural cell surface protein F3 | |
| Modification date | 20200313 | |
| UniProtAcc | Q12860, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for CNTN1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_342942(40698443, +), ADediting_342943(40698498, +), ADediting_342944(40700316, +), ADediting_342945(40700403, +), ADediting_342946(40700405, +), ADediting_342947(40700447, +), ADediting_342948(40700467, +), ADediting_342949(40700481, +), ADediting_342950(40702201, +), ADediting_342951(40702216, +), ADediting_342952(40702538, +), ADediting_342953(40702562, +), ADediting_342954(40702570, +), ADediting_342955(40702584, +), ADediting_342956(40702586, +), ADediting_342957(40702629, +), ADediting_342958(40702679, +), ADediting_342959(40702683, +), ADediting_342960(40702716, +), ADediting_342961(40705954, +), ADediting_342962(40706013, +), ADediting_342963(40706039, +), ADediting_342964(40712836, +), ADediting_342965(40712844, +), ADediting_342966(40712857, +), ADediting_342967(40712862, +), ADediting_342968(40712863, +), ADediting_342969(40712884, +), ADediting_342970(40718196, +), ADediting_342971(40718225, +), ADediting_342972(40718232, +), ADediting_342973(40718268, +), ADediting_342974(40718269, +), ADediting_342975(40718298, +), ADediting_342976(40718321, +), ADediting_342977(40718402, +), ADediting_342978(40718415, +), ADediting_342979(40718417, +), ADediting_342980(40718418, +), ADediting_342981(40719874, +), ADediting_342982(40719905, +), ADediting_342983(40719912, +), ADediting_342984(40719918, +), ADediting_342985(40719937, +), ADediting_342986(40719938, +), ADediting_342987(40719942, +), ADediting_342988(40719964, +), ADediting_342989(40719967, +), ADediting_342990(40719977, +), ADediting_342991(40720050, +), ADediting_342992(40720053, +), ADediting_342993(40720062, +), ADediting_342994(40720074, +), ADediting_342995(40720075, +), ADediting_342996(40720112, +), ADediting_342997(40720113, +), ADediting_342998(40720125, +), ADediting_342999(40720673, +), ADediting_343000(40720674, +), ADediting_343001(40720691, +), ADediting_343002(40720696, +), ADediting_343003(40720709, +), ADediting_343004(40720712, +), ADediting_343005(40720717, +), ADediting_343006(40720725, +), ADediting_343007(40720726, +), ADediting_343008(40720731, +), ADediting_343009(40720740, +), ADediting_343010(40720741, +), ADediting_343011(40720743, +), ADediting_343012(40720749, +), ADediting_343013(40720751, +), ADediting_343014(40720782, +), ADediting_343015(40720800, +), ADediting_343016(40720808, +), ADediting_343017(40720809, +), ADediting_343018(40720818, +), ADediting_343019(40720850, +), ADediting_343020(40720870, +), ADediting_343021(40720874, +), ADediting_343022(40720879, +), ADediting_343023(40720886, +), ADediting_343024(40720918, +), ADediting_343025(40725254, +), ADediting_343026(40726320, +), ADediting_343027(40726348, +), ADediting_343028(40726354, +), ADediting_343029(40726355, +), ADediting_343030(40726356, +), ADediting_343031(40726361, +), ADediting_343032(40726398, +), ADediting_343033(40726414, +), ADediting_343034(40726428, +), ADediting_343035(40726433, +), ADediting_343036(40726434, +), ADediting_343037(40726443, +), ADediting_343038(40726466, +), ADediting_343039(40726517, +), ADediting_343040(40726583, +), ADediting_343041(40726621, +), ADediting_343042(40740689, +), ADediting_343043(40740707, +), ADediting_343044(40740785, +), ADediting_343045(40740987, +), ADediting_343046(40742588, +), ADediting_343047(40743961, +), ADediting_343048(40743964, +), ADediting_343049(40743972, +), ADediting_343050(40744004, +), ADediting_343051(40744020, +), ADediting_343052(40744021, +), ADediting_343053(40744025, +), ADediting_343054(40744028, +), ADediting_343055(40744036, +), ADediting_343056(40744040, +), ADediting_343057(40744041, +), ADediting_343058(40744046, +), ADediting_343059(40744051, +), ADediting_343060(40744067, +), ADediting_343061(40744068, +), ADediting_343062(40744083, +), ADediting_343063(40744086, +), ADediting_343064(40744101, +), ADediting_343065(40744102, +), ADediting_343066(40753391, +), ADediting_343067(40753407, +), ADediting_343068(40753429, +), ADediting_343069(40753438, +), ADediting_343070(40753446, +), ADediting_343071(40753463, +), ADediting_343072(40753570, +), ADediting_343073(40753572, +), ADediting_343074(40753658, +), ADediting_343075(40754940, +), ADediting_343076(40755005, +), ADediting_343077(40755009, +), ADediting_343078(40755026, +), ADediting_343079(40755044, +), ADediting_343080(40755070, +), ADediting_343081(40755080, +), ADediting_343082(40755085, +), ADediting_343083(40755087, +), ADediting_343084(40755116, +), ADediting_343085(40755120, +), ADediting_343086(40755450, +), ADediting_343087(40755458, +), ADediting_343088(40755479, +), ADediting_343089(40755480, +), ADediting_343090(40755517, +), ADediting_343091(40755521, +), ADediting_343092(40755530, +), ADediting_343093(40755597, +), ADediting_343094(40755600, +), ADediting_343095(40755614, +), ADediting_343096(40755617, +), ADediting_343097(40755649, +), ADediting_343098(40755659, +), ADediting_343099(40758935, +), ADediting_343100(40758961, +), ADediting_343101(40758985, +), ADediting_343102(40759004, +), ADediting_343103(40759030, +), ADediting_343104(40759033, +), ADediting_343105(40759043, +), ADediting_343106(40759086, +), ADediting_343107(40759113, +), ADediting_343108(40759118, +), ADediting_343109(40759125, +), ADediting_343110(40759126, +), ADediting_343111(40759156, +), ADediting_343112(40759184, +), ADediting_343113(40759497, +), ADediting_343114(40759552, +), ADediting_343115(40759559, +), ADediting_343116(40759591, +), ADediting_343117(40759592, +), ADediting_343118(40759595, +), ADediting_343119(40759599, +), ADediting_343120(40759605, +), ADediting_343121(40759607, +), ADediting_343122(40759623, +), ADediting_343123(40759652, +), ADediting_343124(40759678, +), ADediting_343125(40762873, +), ADediting_343126(40762947, +), ADediting_343127(40763094, +), ADediting_343128(40763131, +), ADediting_343129(40763133, +), ADediting_343130(40764468, +), ADediting_343131(40764501, +), ADediting_343132(40766102, +), ADediting_343133(40766133, +), ADediting_343134(40766149, +), ADediting_343135(40766171, +), ADediting_343136(40766180, +), ADediting_343137(40766182, +), ADediting_343138(40766193, +), ADediting_343139(40766202, +), ADediting_343140(40766236, +), ADediting_343141(40766237, +), ADediting_343142(40766246, +), ADediting_343143(40766254, +), ADediting_343144(40766259, +), ADediting_343145(40766263, +), ADediting_343146(40766286, +), ADediting_343147(40766298, +), ADediting_343148(40766307, +), ADediting_343149(40766312, +), ADediting_343150(40766346, +), ADediting_343151(40766347, +), ADediting_343152(40767470, +), ADediting_343153(40767484, +), ADediting_343154(40767507, +), ADediting_343155(40767569, +), ADediting_343156(40767582, +), ADediting_343157(40767588, +), ADediting_343158(40785844, +), ADediting_343159(40833189, +), ADediting_343160(40846236, +), ADediting_343161(40846347, +), ADediting_343162(40846353, +), ADediting_343163(40846409, +), ADediting_343164(40846413, +), ADediting_343165(40846418, +), ADediting_343166(40846455, +), ADediting_343167(40846761, +), ADediting_343168(40846844, +), ADediting_343169(40847007, +), ADediting_343170(40847051, +), ADediting_343171(40847901, +), ADediting_343172(40858706, +), ADediting_343173(40858745, +), ADediting_343174(40862350, +), ADediting_343175(40864705, +), ADediting_343176(40877360, +), ADediting_343177(40877378, +), ADediting_343178(40877612, +), ADediting_343179(40877628, +), ADediting_343180(40877631, +), ADediting_343181(40877632, +), ADediting_343182(40877635, +), ADediting_343183(40878387, +), ADediting_343184(40878423, +), ADediting_343185(40878477, +), ADediting_343186(40878521, +), ADediting_343187(40878543, +), ADediting_343188(40878548, +), ADediting_343189(40878576, +), ADediting_343190(40878580, +), ADediting_343191(40878612, +), ADediting_343192(40878619, +), ADediting_343193(40878624, +), ADediting_343194(40878632, +), ADediting_343195(40878643, +), ADediting_343196(40878644, +), ADediting_343197(40878678, +), ADediting_343198(40878686, +), ADediting_343199(40878688, +), ADediting_343200(40881601, +), ADediting_343201(40881619, +), ADediting_343202(40881635, +), ADediting_343203(40881642, +), ADediting_343204(40881643, +), ADediting_343205(40881646, +), ADediting_343206(40881662, +), ADediting_343207(40881663, +), ADediting_343208(40881666, +), ADediting_343209(40881671, +), ADediting_343210(40881839, +), ADediting_343211(40881852, +), ADediting_343212(40881893, +), ADediting_343213(40882086, +), ADediting_343214(40882571, +), ADediting_343215(40882604, +), ADediting_343216(40899668, +), ADediting_343217(40899699, +), ADediting_343218(40899712, +), ADediting_343219(40899865, +), ADediting_343220(40901125, +), ADediting_343221(40901302, +), ADediting_343222(40901313, +), ADediting_343223(40901328, +), ADediting_343224(40901334, +), ADediting_343225(40901338, +), ADediting_343226(40901491, +), ADediting_343227(40901500, +), ADediting_343228(40901502, +), ADediting_343229(40901514, +), ADediting_343230(40901523, +), ADediting_343231(40906779, +), ADediting_343232(40974382, +), ADediting_343233(40974386, +), ADediting_343234(40974392, +), ADediting_343235(40974400, +), ADediting_343236(40974401, +), ADediting_343237(40974411, +), ADediting_343238(40977988, +), ADediting_343239(40978000, +), ADediting_343240(40978012, +), ADediting_343241(40978025, +), ADediting_343242(40978041, +), ADediting_343243(41032288, +), ADediting_343244(41032319, +), ADediting_343245(41032328, +), ADediting_343246(41032350, +), ADediting_343247(41038083, +), ADediting_343248(41049934, +), ADediting_343249(41049958, +), ADediting_343250(41049961, +), ADediting_343251(41049963, +), ADediting_343252(41063908, +), ADediting_343253(41063939, +), ADediting_1532282(40698497, +), ADediting_1532283(40698510, +), ADediting_1532284(40702571, +), ADediting_1532285(40702579, +), ADediting_1532286(40702645, +), ADediting_1532287(40755619, +), ADediting_1532288(40833175, +), ADediting_1532289(40833188, +), ADediting_1613552(40702597, +), ADediting_1613553(40702610, +), ADediting_1613554(40705726, +), ADediting_1613555(40719881, +), ADediting_1613556(40720082, +), ADediting_1613557(40720701, +), ADediting_1613558(40720750, +), ADediting_1613559(40720841, +), ADediting_1613560(40753405, +), ADediting_1613561(40753573, +), ADediting_1613562(40753644, +), ADediting_1613563(40755457, +), ADediting_1613564(40759178, +), ADediting_1613565(40764476, +), ADediting_1613566(40764500, +), ADediting_1613567(40785824, +), ADediting_1613568(40846448, +), ADediting_1613569(40846831, +), ADediting_1613570(40846997, +), ADediting_1613571(40847042, +), ADediting_1613572(40847113, +), ADediting_1613573(40847912, +), ADediting_1613574(40863589, +), ADediting_1613575(40877396, +), ADediting_1613576(40878537, +), ADediting_1613577(40878542, +), ADediting_1613578(40878572, +), ADediting_1613579(40878581, +), ADediting_1613580(40878618, +), ADediting_1613581(40878642, +), ADediting_1613582(40878654, +), ADediting_1613583(40881611, +), ADediting_1613584(40881624, +), ADediting_1613585(40881632, +), ADediting_1613586(40881655, +), ADediting_1613587(40881887, +), ADediting_1613588(40882370, +), ADediting_1613589(40882374, +), ADediting_1613590(40882397, +), ADediting_1613591(40882403, +), ADediting_1613592(40882405, +), ADediting_1613593(40882408, +), ADediting_1613594(40882419, +), ADediting_1613595(40882594, +), ADediting_1613596(40882596, +), ADediting_1613597(40899680, +), ADediting_1613598(40899685, +), ADediting_1613599(40899708, +), ADediting_1613600(40899770, +), ADediting_1613601(40899840, +), ADediting_1613602(40899842, +), ADediting_1613603(40899856, +), ADediting_1613604(40899859, +), ADediting_1613605(40899863, +), ADediting_1613606(40899874, +), ADediting_1613607(40899877, +), ADediting_1613608(40899911, +), ADediting_1613609(40899986, +), ADediting_1613610(40901155, +), ADediting_1613611(40901249, +), ADediting_1613612(40901252, +), ADediting_1613613(40901253, +), ADediting_1613614(40901262, +), ADediting_1613615(40901308, +), ADediting_1613616(40901471, +), ADediting_1613617(40901497, +), ADediting_1613618(40901501, +), ADediting_1613619(40901508, +), ADediting_1613620(40901519, +), ADediting_1613621(40901522, +), ADediting_1613622(40901532, +), ADediting_1613623(40906849, +), |
Top |
RNA editing positional annotations for CNTN1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_342942 | chr12_40698443_+ | intronic |
| ADediting_342943 | chr12_40698498_+ | intronic |
| ADediting_342944 | chr12_40700316_+ | intronic |
| ADediting_342945 | chr12_40700403_+ | intronic |
| ADediting_342946 | chr12_40700405_+ | intronic |
| ADediting_342947 | chr12_40700447_+ | intronic |
| ADediting_342948 | chr12_40700467_+ | intronic |
| ADediting_342949 | chr12_40700481_+ | intronic |
| ADediting_342950 | chr12_40702201_+ | intronic |
| ADediting_342951 | chr12_40702216_+ | intronic |
| ADediting_342952 | chr12_40702538_+ | intronic |
| ADediting_342953 | chr12_40702562_+ | intronic |
| ADediting_342954 | chr12_40702570_+ | intronic |
| ADediting_342955 | chr12_40702584_+ | intronic |
| ADediting_342956 | chr12_40702586_+ | intronic |
| ADediting_342957 | chr12_40702629_+ | intronic |
| ADediting_342958 | chr12_40702679_+ | intronic |
| ADediting_342959 | chr12_40702683_+ | intronic |
| ADediting_342960 | chr12_40702716_+ | intronic |
| ADediting_342961 | chr12_40705954_+ | intronic |
| ADediting_342962 | chr12_40706013_+ | intronic |
| ADediting_342963 | chr12_40706039_+ | intronic |
| ADediting_342964 | chr12_40712836_+ | intronic |
| ADediting_342965 | chr12_40712844_+ | intronic |
| ADediting_342966 | chr12_40712857_+ | intronic |
| ADediting_342967 | chr12_40712862_+ | intronic |
| ADediting_342968 | chr12_40712863_+ | intronic |
| ADediting_342969 | chr12_40712884_+ | intronic |
| ADediting_342970 | chr12_40718196_+ | intronic |
| ADediting_342971 | chr12_40718225_+ | intronic |
| ADediting_342972 | chr12_40718232_+ | intronic |
| ADediting_342973 | chr12_40718268_+ | intronic |
| ADediting_342974 | chr12_40718269_+ | intronic |
| ADediting_342975 | chr12_40718298_+ | intronic |
| ADediting_342976 | chr12_40718321_+ | intronic |
| ADediting_342977 | chr12_40718402_+ | intronic |
| ADediting_342978 | chr12_40718415_+ | intronic |
| ADediting_342979 | chr12_40718417_+ | intronic |
| ADediting_342980 | chr12_40718418_+ | intronic |
| ADediting_342981 | chr12_40719874_+ | intronic |
| ADediting_342982 | chr12_40719905_+ | intronic |
| ADediting_342983 | chr12_40719912_+ | intronic |
| ADediting_342984 | chr12_40719918_+ | intronic |
| ADediting_342985 | chr12_40719937_+ | intronic |
| ADediting_342986 | chr12_40719938_+ | intronic |
| ADediting_342987 | chr12_40719942_+ | intronic |
| ADediting_342988 | chr12_40719964_+ | intronic |
| ADediting_342989 | chr12_40719967_+ | intronic |
| ADediting_342990 | chr12_40719977_+ | intronic |
| ADediting_342991 | chr12_40720050_+ | intronic |
| ADediting_342992 | chr12_40720053_+ | intronic |
| ADediting_342993 | chr12_40720062_+ | intronic |
| ADediting_342994 | chr12_40720074_+ | intronic |
| ADediting_342995 | chr12_40720075_+ | intronic |
| ADediting_342996 | chr12_40720112_+ | intronic |
| ADediting_342997 | chr12_40720113_+ | intronic |
| ADediting_342998 | chr12_40720125_+ | intronic |
| ADediting_342999 | chr12_40720673_+ | intronic |
| ADediting_343000 | chr12_40720674_+ | intronic |
| ADediting_343001 | chr12_40720691_+ | intronic |
| ADediting_343002 | chr12_40720696_+ | intronic |
| ADediting_343003 | chr12_40720709_+ | intronic |
| ADediting_343004 | chr12_40720712_+ | intronic |
| ADediting_343005 | chr12_40720717_+ | intronic |
| ADediting_343006 | chr12_40720725_+ | intronic |
| ADediting_343007 | chr12_40720726_+ | intronic |
| ADediting_343008 | chr12_40720731_+ | intronic |
| ADediting_343009 | chr12_40720740_+ | intronic |
| ADediting_343010 | chr12_40720741_+ | intronic |
| ADediting_343011 | chr12_40720743_+ | intronic |
| ADediting_343012 | chr12_40720749_+ | intronic |
| ADediting_343013 | chr12_40720751_+ | intronic |
| ADediting_343014 | chr12_40720782_+ | intronic |
| ADediting_343015 | chr12_40720800_+ | intronic |
| ADediting_343016 | chr12_40720808_+ | intronic |
| ADediting_343017 | chr12_40720809_+ | intronic |
| ADediting_343018 | chr12_40720818_+ | intronic |
| ADediting_343019 | chr12_40720850_+ | intronic |
| ADediting_343020 | chr12_40720870_+ | intronic |
| ADediting_343021 | chr12_40720874_+ | intronic |
| ADediting_343022 | chr12_40720879_+ | intronic |
| ADediting_343023 | chr12_40720886_+ | intronic |
| ADediting_343024 | chr12_40720918_+ | intronic |
| ADediting_343025 | chr12_40725254_+ | intronic |
| ADediting_343026 | chr12_40726320_+ | intronic |
| ADediting_343027 | chr12_40726348_+ | intronic |
| ADediting_343028 | chr12_40726354_+ | intronic |
| ADediting_343029 | chr12_40726355_+ | intronic |
| ADediting_343030 | chr12_40726356_+ | intronic |
| ADediting_343031 | chr12_40726361_+ | intronic |
| ADediting_343032 | chr12_40726398_+ | intronic |
| ADediting_343033 | chr12_40726414_+ | intronic |
| ADediting_343034 | chr12_40726428_+ | intronic |
| ADediting_343035 | chr12_40726433_+ | intronic |
| ADediting_343036 | chr12_40726434_+ | intronic |
| ADediting_343037 | chr12_40726443_+ | intronic |
| ADediting_343038 | chr12_40726466_+ | intronic |
| ADediting_343039 | chr12_40726517_+ | intronic |
| ADediting_343040 | chr12_40726583_+ | intronic |
| ADediting_343041 | chr12_40726621_+ | intronic |
| ADediting_343042 | chr12_40740689_+ | intronic |
| ADediting_343043 | chr12_40740707_+ | intronic |
| ADediting_343044 | chr12_40740785_+ | intronic |
| ADediting_343045 | chr12_40740987_+ | intronic |
| ADediting_343046 | chr12_40742588_+ | intronic |
| ADediting_343047 | chr12_40743961_+ | intronic |
| ADediting_343048 | chr12_40743964_+ | intronic |
| ADediting_343049 | chr12_40743972_+ | intronic |
| ADediting_343050 | chr12_40744004_+ | intronic |
| ADediting_343051 | chr12_40744020_+ | intronic |
| ADediting_343052 | chr12_40744021_+ | intronic |
| ADediting_343053 | chr12_40744025_+ | intronic |
| ADediting_343054 | chr12_40744028_+ | intronic |
| ADediting_343055 | chr12_40744036_+ | intronic |
| ADediting_343056 | chr12_40744040_+ | intronic |
| ADediting_343057 | chr12_40744041_+ | intronic |
| ADediting_343058 | chr12_40744046_+ | intronic |
| ADediting_343059 | chr12_40744051_+ | intronic |
| ADediting_343060 | chr12_40744067_+ | intronic |
| ADediting_343061 | chr12_40744068_+ | intronic |
| ADediting_343062 | chr12_40744083_+ | intronic |
| ADediting_343063 | chr12_40744086_+ | intronic |
| ADediting_343064 | chr12_40744101_+ | intronic |
| ADediting_343065 | chr12_40744102_+ | intronic |
| ADediting_343066 | chr12_40753391_+ | intronic |
| ADediting_343067 | chr12_40753407_+ | intronic |
| ADediting_343068 | chr12_40753429_+ | intronic |
| ADediting_343069 | chr12_40753438_+ | intronic |
| ADediting_343070 | chr12_40753446_+ | intronic |
| ADediting_343071 | chr12_40753463_+ | intronic |
| ADediting_343072 | chr12_40753570_+ | intronic |
| ADediting_343073 | chr12_40753572_+ | intronic |
| ADediting_343074 | chr12_40753658_+ | intronic |
| ADediting_343075 | chr12_40754940_+ | intronic |
| ADediting_343076 | chr12_40755005_+ | intronic |
| ADediting_343077 | chr12_40755009_+ | intronic |
| ADediting_343078 | chr12_40755026_+ | intronic |
| ADediting_343079 | chr12_40755044_+ | intronic |
| ADediting_343080 | chr12_40755070_+ | intronic |
| ADediting_343081 | chr12_40755080_+ | intronic |
| ADediting_343082 | chr12_40755085_+ | intronic |
| ADediting_343083 | chr12_40755087_+ | intronic |
| ADediting_343084 | chr12_40755116_+ | intronic |
| ADediting_343085 | chr12_40755120_+ | intronic |
| ADediting_343086 | chr12_40755450_+ | intronic |
| ADediting_343087 | chr12_40755458_+ | intronic |
| ADediting_343088 | chr12_40755479_+ | intronic |
| ADediting_343089 | chr12_40755480_+ | intronic |
| ADediting_343090 | chr12_40755517_+ | intronic |
| ADediting_343091 | chr12_40755521_+ | intronic |
| ADediting_343092 | chr12_40755530_+ | intronic |
| ADediting_343093 | chr12_40755597_+ | intronic |
| ADediting_343094 | chr12_40755600_+ | intronic |
| ADediting_343095 | chr12_40755614_+ | intronic |
| ADediting_343096 | chr12_40755617_+ | intronic |
| ADediting_343097 | chr12_40755649_+ | intronic |
| ADediting_343098 | chr12_40755659_+ | intronic |
| ADediting_343099 | chr12_40758935_+ | intronic |
| ADediting_343100 | chr12_40758961_+ | intronic |
| ADediting_343101 | chr12_40758985_+ | intronic |
| ADediting_343102 | chr12_40759004_+ | intronic |
| ADediting_343103 | chr12_40759030_+ | intronic |
| ADediting_343104 | chr12_40759033_+ | intronic |
| ADediting_343105 | chr12_40759043_+ | intronic |
| ADediting_343106 | chr12_40759086_+ | intronic |
| ADediting_343107 | chr12_40759113_+ | intronic |
| ADediting_343108 | chr12_40759118_+ | intronic |
| ADediting_343109 | chr12_40759125_+ | intronic |
| ADediting_343110 | chr12_40759126_+ | intronic |
| ADediting_343111 | chr12_40759156_+ | intronic |
| ADediting_343112 | chr12_40759184_+ | intronic |
| ADediting_343113 | chr12_40759497_+ | intronic |
| ADediting_343114 | chr12_40759552_+ | intronic |
| ADediting_343115 | chr12_40759559_+ | intronic |
| ADediting_343116 | chr12_40759591_+ | intronic |
| ADediting_343117 | chr12_40759592_+ | intronic |
| ADediting_343118 | chr12_40759595_+ | intronic |
| ADediting_343119 | chr12_40759599_+ | intronic |
| ADediting_343120 | chr12_40759605_+ | intronic |
| ADediting_343121 | chr12_40759607_+ | intronic |
| ADediting_343122 | chr12_40759623_+ | intronic |
| ADediting_343123 | chr12_40759652_+ | intronic |
| ADediting_343124 | chr12_40759678_+ | intronic |
| ADediting_343125 | chr12_40762873_+ | intronic |
| ADediting_343126 | chr12_40762947_+ | intronic |
| ADediting_343127 | chr12_40763094_+ | splicing |
| ADediting_343128 | chr12_40763131_+ | UTR5 |
| ADediting_343129 | chr12_40763133_+ | UTR5 |
| ADediting_343130 | chr12_40764468_+ | intronic |
| ADediting_343131 | chr12_40764501_+ | intronic |
| ADediting_343132 | chr12_40766102_+ | intronic |
| ADediting_343133 | chr12_40766133_+ | intronic |
| ADediting_343134 | chr12_40766149_+ | intronic |
| ADediting_343135 | chr12_40766171_+ | intronic |
| ADediting_343136 | chr12_40766180_+ | intronic |
| ADediting_343137 | chr12_40766182_+ | intronic |
| ADediting_343138 | chr12_40766193_+ | intronic |
| ADediting_343139 | chr12_40766202_+ | intronic |
| ADediting_343140 | chr12_40766236_+ | intronic |
| ADediting_343141 | chr12_40766237_+ | intronic |
| ADediting_343142 | chr12_40766246_+ | intronic |
| ADediting_343143 | chr12_40766254_+ | intronic |
| ADediting_343144 | chr12_40766259_+ | intronic |
| ADediting_343145 | chr12_40766263_+ | intronic |
| ADediting_343146 | chr12_40766286_+ | intronic |
| ADediting_343147 | chr12_40766298_+ | intronic |
| ADediting_343148 | chr12_40766307_+ | intronic |
| ADediting_343149 | chr12_40766312_+ | intronic |
| ADediting_343150 | chr12_40766346_+ | intronic |
| ADediting_343151 | chr12_40766347_+ | intronic |
| ADediting_343152 | chr12_40767470_+ | intronic |
| ADediting_343153 | chr12_40767484_+ | intronic |
| ADediting_343154 | chr12_40767507_+ | intronic |
| ADediting_343155 | chr12_40767569_+ | intronic |
| ADediting_343156 | chr12_40767582_+ | intronic |
| ADediting_343157 | chr12_40767588_+ | intronic |
| ADediting_343158 | chr12_40785844_+ | intronic |
| ADediting_343159 | chr12_40833189_+ | intronic |
| ADediting_343160 | chr12_40846236_+ | intronic |
| ADediting_343161 | chr12_40846347_+ | intronic |
| ADediting_343162 | chr12_40846353_+ | intronic |
| ADediting_343163 | chr12_40846409_+ | intronic |
| ADediting_343164 | chr12_40846413_+ | intronic |
| ADediting_343165 | chr12_40846418_+ | intronic |
| ADediting_343166 | chr12_40846455_+ | intronic |
| ADediting_343167 | chr12_40846761_+ | intronic |
| ADediting_343168 | chr12_40846844_+ | intronic |
| ADediting_343169 | chr12_40847007_+ | intronic |
| ADediting_343170 | chr12_40847051_+ | intronic |
| ADediting_343171 | chr12_40847901_+ | intronic |
| ADediting_343172 | chr12_40858706_+ | intronic |
| ADediting_343173 | chr12_40858745_+ | intronic |
| ADediting_343174 | chr12_40862350_+ | intronic |
| ADediting_343175 | chr12_40864705_+ | intronic |
| ADediting_343176 | chr12_40877360_+ | intronic |
| ADediting_343177 | chr12_40877378_+ | intronic |
| ADediting_343178 | chr12_40877612_+ | intronic |
| ADediting_343179 | chr12_40877628_+ | intronic |
| ADediting_343180 | chr12_40877631_+ | intronic |
| ADediting_343181 | chr12_40877632_+ | intronic |
| ADediting_343182 | chr12_40877635_+ | intronic |
| ADediting_343183 | chr12_40878387_+ | intronic |
| ADediting_343184 | chr12_40878423_+ | intronic |
| ADediting_343185 | chr12_40878477_+ | intronic |
| ADediting_343186 | chr12_40878521_+ | intronic |
| ADediting_343187 | chr12_40878543_+ | intronic |
| ADediting_343188 | chr12_40878548_+ | intronic |
| ADediting_343189 | chr12_40878576_+ | intronic |
| ADediting_343190 | chr12_40878580_+ | intronic |
| ADediting_343191 | chr12_40878612_+ | intronic |
| ADediting_343192 | chr12_40878619_+ | intronic |
| ADediting_343193 | chr12_40878624_+ | intronic |
| ADediting_343194 | chr12_40878632_+ | intronic |
| ADediting_343195 | chr12_40878643_+ | intronic |
| ADediting_343196 | chr12_40878644_+ | intronic |
| ADediting_343197 | chr12_40878678_+ | intronic |
| ADediting_343198 | chr12_40878686_+ | intronic |
| ADediting_343199 | chr12_40878688_+ | intronic |
| ADediting_343200 | chr12_40881601_+ | intronic |
| ADediting_343201 | chr12_40881619_+ | intronic |
| ADediting_343202 | chr12_40881635_+ | intronic |
| ADediting_343203 | chr12_40881642_+ | intronic |
| ADediting_343204 | chr12_40881643_+ | intronic |
| ADediting_343205 | chr12_40881646_+ | intronic |
| ADediting_343206 | chr12_40881662_+ | intronic |
| ADediting_343207 | chr12_40881663_+ | intronic |
| ADediting_343208 | chr12_40881666_+ | intronic |
| ADediting_343209 | chr12_40881671_+ | intronic |
| ADediting_343210 | chr12_40881839_+ | intronic |
| ADediting_343211 | chr12_40881852_+ | intronic |
| ADediting_343212 | chr12_40881893_+ | intronic |
| ADediting_343213 | chr12_40882086_+ | intronic |
| ADediting_343214 | chr12_40882571_+ | intronic |
| ADediting_343215 | chr12_40882604_+ | intronic |
| ADediting_343216 | chr12_40899668_+ | intronic |
| ADediting_343217 | chr12_40899699_+ | intronic |
| ADediting_343218 | chr12_40899712_+ | intronic |
| ADediting_343219 | chr12_40899865_+ | intronic |
| ADediting_343220 | chr12_40901125_+ | intronic |
| ADediting_343221 | chr12_40901302_+ | intronic |
| ADediting_343222 | chr12_40901313_+ | intronic |
| ADediting_343223 | chr12_40901328_+ | intronic |
| ADediting_343224 | chr12_40901334_+ | intronic |
| ADediting_343225 | chr12_40901338_+ | intronic |
| ADediting_343226 | chr12_40901491_+ | intronic |
| ADediting_343227 | chr12_40901500_+ | intronic |
| ADediting_343228 | chr12_40901502_+ | intronic |
| ADediting_343229 | chr12_40901514_+ | intronic |
| ADediting_343230 | chr12_40901523_+ | intronic |
| ADediting_343231 | chr12_40906779_+ | intronic |
| ADediting_343232 | chr12_40974382_+ | intronic |
| ADediting_343233 | chr12_40974386_+ | intronic |
| ADediting_343234 | chr12_40974392_+ | intronic |
| ADediting_343235 | chr12_40974400_+ | intronic |
| ADediting_343236 | chr12_40974401_+ | intronic |
| ADediting_343237 | chr12_40974411_+ | intronic |
| ADediting_343238 | chr12_40977988_+ | intronic |
| ADediting_343239 | chr12_40978000_+ | intronic |
| ADediting_343240 | chr12_40978012_+ | intronic |
| ADediting_343241 | chr12_40978025_+ | intronic |
| ADediting_343242 | chr12_40978041_+ | intronic |
| ADediting_343243 | chr12_41032288_+ | intronic |
| ADediting_343244 | chr12_41032319_+ | intronic |
| ADediting_343245 | chr12_41032328_+ | intronic |
| ADediting_343246 | chr12_41032350_+ | intronic |
| ADediting_343247 | chr12_41038083_+ | intronic |
| ADediting_343248 | chr12_41049934_+ | intronic |
| ADediting_343249 | chr12_41049958_+ | intronic |
| ADediting_343250 | chr12_41049961_+ | intronic |
| ADediting_343251 | chr12_41049963_+ | intronic |
| ADediting_343252 | chr12_41063908_+ | intronic |
| ADediting_343253 | chr12_41063939_+ | intronic |
| ADediting_1532282 | chr12_40698497_+ | intronic |
| ADediting_1532283 | chr12_40698510_+ | intronic |
| ADediting_1532284 | chr12_40702571_+ | intronic |
| ADediting_1532285 | chr12_40702579_+ | intronic |
| ADediting_1532286 | chr12_40702645_+ | intronic |
| ADediting_1532287 | chr12_40755619_+ | intronic |
| ADediting_1532288 | chr12_40833175_+ | intronic |
| ADediting_1532289 | chr12_40833188_+ | intronic |
| ADediting_1613552 | chr12_40702597_+ | intronic |
| ADediting_1613553 | chr12_40702610_+ | intronic |
| ADediting_1613554 | chr12_40705726_+ | intronic |
| ADediting_1613555 | chr12_40719881_+ | intronic |
| ADediting_1613556 | chr12_40720082_+ | intronic |
| ADediting_1613557 | chr12_40720701_+ | intronic |
| ADediting_1613558 | chr12_40720750_+ | intronic |
| ADediting_1613559 | chr12_40720841_+ | intronic |
| ADediting_1613560 | chr12_40753405_+ | intronic |
| ADediting_1613561 | chr12_40753573_+ | intronic |
| ADediting_1613562 | chr12_40753644_+ | intronic |
| ADediting_1613563 | chr12_40755457_+ | intronic |
| ADediting_1613564 | chr12_40759178_+ | intronic |
| ADediting_1613565 | chr12_40764476_+ | intronic |
| ADediting_1613566 | chr12_40764500_+ | intronic |
| ADediting_1613567 | chr12_40785824_+ | intronic |
| ADediting_1613568 | chr12_40846448_+ | intronic |
| ADediting_1613569 | chr12_40846831_+ | intronic |
| ADediting_1613570 | chr12_40846997_+ | intronic |
| ADediting_1613571 | chr12_40847042_+ | intronic |
| ADediting_1613572 | chr12_40847113_+ | intronic |
| ADediting_1613573 | chr12_40847912_+ | intronic |
| ADediting_1613574 | chr12_40863589_+ | intronic |
| ADediting_1613575 | chr12_40877396_+ | intronic |
| ADediting_1613576 | chr12_40878537_+ | intronic |
| ADediting_1613577 | chr12_40878542_+ | intronic |
| ADediting_1613578 | chr12_40878572_+ | intronic |
| ADediting_1613579 | chr12_40878581_+ | intronic |
| ADediting_1613580 | chr12_40878618_+ | intronic |
| ADediting_1613581 | chr12_40878642_+ | intronic |
| ADediting_1613582 | chr12_40878654_+ | intronic |
| ADediting_1613583 | chr12_40881611_+ | intronic |
| ADediting_1613584 | chr12_40881624_+ | intronic |
| ADediting_1613585 | chr12_40881632_+ | intronic |
| ADediting_1613586 | chr12_40881655_+ | intronic |
| ADediting_1613587 | chr12_40881887_+ | intronic |
| ADediting_1613588 | chr12_40882370_+ | intronic |
| ADediting_1613589 | chr12_40882374_+ | intronic |
| ADediting_1613590 | chr12_40882397_+ | intronic |
| ADediting_1613591 | chr12_40882403_+ | intronic |
| ADediting_1613592 | chr12_40882405_+ | intronic |
| ADediting_1613593 | chr12_40882408_+ | intronic |
| ADediting_1613594 | chr12_40882419_+ | intronic |
| ADediting_1613595 | chr12_40882594_+ | intronic |
| ADediting_1613596 | chr12_40882596_+ | intronic |
| ADediting_1613597 | chr12_40899680_+ | intronic |
| ADediting_1613598 | chr12_40899685_+ | intronic |
| ADediting_1613599 | chr12_40899708_+ | intronic |
| ADediting_1613600 | chr12_40899770_+ | intronic |
| ADediting_1613601 | chr12_40899840_+ | intronic |
| ADediting_1613602 | chr12_40899842_+ | intronic |
| ADediting_1613603 | chr12_40899856_+ | intronic |
| ADediting_1613604 | chr12_40899859_+ | intronic |
| ADediting_1613605 | chr12_40899863_+ | intronic |
| ADediting_1613606 | chr12_40899874_+ | intronic |
| ADediting_1613607 | chr12_40899877_+ | intronic |
| ADediting_1613608 | chr12_40899911_+ | intronic |
| ADediting_1613609 | chr12_40899986_+ | intronic |
| ADediting_1613610 | chr12_40901155_+ | intronic |
| ADediting_1613611 | chr12_40901249_+ | intronic |
| ADediting_1613612 | chr12_40901252_+ | intronic |
| ADediting_1613613 | chr12_40901253_+ | intronic |
| ADediting_1613614 | chr12_40901262_+ | intronic |
| ADediting_1613615 | chr12_40901308_+ | intronic |
| ADediting_1613616 | chr12_40901471_+ | intronic |
| ADediting_1613617 | chr12_40901497_+ | intronic |
| ADediting_1613618 | chr12_40901501_+ | intronic |
| ADediting_1613619 | chr12_40901508_+ | intronic |
| ADediting_1613620 | chr12_40901519_+ | intronic |
| ADediting_1613621 | chr12_40901522_+ | intronic |
| ADediting_1613622 | chr12_40901532_+ | intronic |
| ADediting_1613623 | chr12_40906849_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_342942 | chr12_40698443_+ | SINE | Alu | Name=AluY |
| ADediting_342943 | chr12_40698498_+ | SINE | Alu | Name=AluY |
| ADediting_342944 | chr12_40700316_+ | SINE | Alu | Name=AluSg |
| ADediting_342945 | chr12_40700403_+ | SINE | Alu | Name=AluSg |
| ADediting_342946 | chr12_40700405_+ | SINE | Alu | Name=AluSg |
| ADediting_342947 | chr12_40700447_+ | SINE | Alu | Name=AluSg |
| ADediting_342948 | chr12_40700467_+ | SINE | Alu | Name=AluSg |
| ADediting_342949 | chr12_40700481_+ | SINE | Alu | Name=AluSg |
| ADediting_342950 | chr12_40702201_+ | SINE | Alu | Name=FLAM_C |
| ADediting_342951 | chr12_40702216_+ | SINE | Alu | Name=FLAM_C |
| ADediting_342952 | chr12_40702538_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342953 | chr12_40702562_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342954 | chr12_40702570_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342955 | chr12_40702584_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342956 | chr12_40702586_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342957 | chr12_40702629_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342958 | chr12_40702679_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342959 | chr12_40702683_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342960 | chr12_40702716_+ | SINE | Alu | Name=AluSq2 |
| ADediting_342961 | chr12_40705954_+ | LTR | ERVL-MaLR | Name=MSTA |
| ADediting_342962 | chr12_40706013_+ | LTR | ERVL-MaLR | Name=MSTA |
| ADediting_342963 | chr12_40706039_+ | LTR | ERVL-MaLR | Name=MSTA |
| ADediting_342964 | chr12_40712836_+ | LTR | ERVL-MaLR | Name=MSTB1 |
| ADediting_342965 | chr12_40712844_+ | LTR | ERVL-MaLR | Name=MSTB1 |
| ADediting_342966 | chr12_40712857_+ | LTR | ERVL-MaLR | Name=MSTB1 |
| ADediting_342967 | chr12_40712862_+ | LTR | ERVL-MaLR | Name=MSTB1 |
| ADediting_342968 | chr12_40712863_+ | LTR | ERVL-MaLR | Name=MSTB1 |
| ADediting_342969 | chr12_40712884_+ | LTR | ERVL-MaLR | Name=MSTB1 |
| ADediting_342970 | chr12_40718196_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342971 | chr12_40718225_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342972 | chr12_40718232_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342973 | chr12_40718268_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342974 | chr12_40718269_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342975 | chr12_40718298_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342976 | chr12_40718321_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342977 | chr12_40718402_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342978 | chr12_40718415_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342979 | chr12_40718417_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342980 | chr12_40718418_+ | SINE | Alu | Name=AluSc8 |
| ADediting_342981 | chr12_40719874_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342982 | chr12_40719905_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342983 | chr12_40719912_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342984 | chr12_40719918_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342985 | chr12_40719937_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342986 | chr12_40719938_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342987 | chr12_40719942_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342988 | chr12_40719964_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342989 | chr12_40719967_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342990 | chr12_40719977_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342991 | chr12_40720050_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342992 | chr12_40720053_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342993 | chr12_40720062_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342994 | chr12_40720074_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342995 | chr12_40720075_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342996 | chr12_40720112_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342997 | chr12_40720113_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342998 | chr12_40720125_+ | SINE | Alu | Name=AluSx3 |
| ADediting_342999 | chr12_40720673_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343000 | chr12_40720674_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343001 | chr12_40720691_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343002 | chr12_40720696_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343003 | chr12_40720709_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343004 | chr12_40720712_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343005 | chr12_40720717_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343006 | chr12_40720725_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343007 | chr12_40720726_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343008 | chr12_40720731_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343009 | chr12_40720740_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343010 | chr12_40720741_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343011 | chr12_40720743_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343012 | chr12_40720749_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343013 | chr12_40720751_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343014 | chr12_40720782_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343015 | chr12_40720800_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343016 | chr12_40720808_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343017 | chr12_40720809_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343018 | chr12_40720818_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343019 | chr12_40720850_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343020 | chr12_40720870_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343021 | chr12_40720874_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343022 | chr12_40720879_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343023 | chr12_40720886_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343024 | chr12_40720918_+ | SINE | Alu | Name=AluSc5 |
| ADediting_343025 | chr12_40725254_+ | SINE | Alu | Name=AluSp |
| ADediting_343026 | chr12_40726320_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343027 | chr12_40726348_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343028 | chr12_40726354_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343029 | chr12_40726355_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343030 | chr12_40726356_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343031 | chr12_40726361_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343032 | chr12_40726398_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343033 | chr12_40726414_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343034 | chr12_40726428_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343035 | chr12_40726433_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343036 | chr12_40726434_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343037 | chr12_40726443_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343038 | chr12_40726466_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343039 | chr12_40726517_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343040 | chr12_40726583_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343041 | chr12_40726621_+ | LTR | ERVL-MaLR | Name=THE1D |
| ADediting_343042 | chr12_40740689_+ | LTR | ERVL-MaLR | Name=THE1B |
| ADediting_343043 | chr12_40740707_+ | LTR | ERVL-MaLR | Name=THE1B |
| ADediting_343044 | chr12_40740785_+ | LTR | ERVL-MaLR | Name=THE1B |
| ADediting_343045 | chr12_40740987_+ | LTR | ERVL-MaLR | Name=THE1B |
| ADediting_343046 | chr12_40742588_+ | SINE | Alu | Name=AluJo |
| ADediting_343047 | chr12_40743961_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343048 | chr12_40743964_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343049 | chr12_40743972_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343050 | chr12_40744004_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343051 | chr12_40744020_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343052 | chr12_40744021_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343053 | chr12_40744025_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343054 | chr12_40744028_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343055 | chr12_40744036_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343056 | chr12_40744040_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343057 | chr12_40744041_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343058 | chr12_40744046_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343059 | chr12_40744051_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343060 | chr12_40744067_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343061 | chr12_40744068_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343062 | chr12_40744083_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343063 | chr12_40744086_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343064 | chr12_40744101_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343065 | chr12_40744102_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343066 | chr12_40753391_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343067 | chr12_40753407_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343068 | chr12_40753429_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343069 | chr12_40753438_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343070 | chr12_40753446_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343071 | chr12_40753463_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343072 | chr12_40753570_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343073 | chr12_40753572_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343074 | chr12_40753658_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_343075 | chr12_40754940_+ | SINE | Alu | Name=AluJo |
| ADediting_343076 | chr12_40755005_+ | SINE | Alu | Name=AluJo |
| ADediting_343077 | chr12_40755009_+ | SINE | Alu | Name=AluJo |
| ADediting_343078 | chr12_40755026_+ | SINE | Alu | Name=AluJo |
| ADediting_343079 | chr12_40755044_+ | SINE | Alu | Name=AluJo |
| ADediting_343080 | chr12_40755070_+ | SINE | Alu | Name=AluJo |
| ADediting_343081 | chr12_40755080_+ | SINE | Alu | Name=AluJo |
| ADediting_343082 | chr12_40755085_+ | SINE | Alu | Name=AluJo |
| ADediting_343083 | chr12_40755087_+ | SINE | Alu | Name=AluJo |
| ADediting_343084 | chr12_40755116_+ | SINE | Alu | Name=AluJo |
| ADediting_343085 | chr12_40755120_+ | SINE | Alu | Name=AluJo |
| ADediting_343086 | chr12_40755450_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343087 | chr12_40755458_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343088 | chr12_40755479_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343089 | chr12_40755480_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343090 | chr12_40755517_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343091 | chr12_40755521_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343092 | chr12_40755530_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343093 | chr12_40755597_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343094 | chr12_40755600_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343095 | chr12_40755614_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343096 | chr12_40755617_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343097 | chr12_40755649_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343098 | chr12_40755659_+ | SINE | Alu | Name=AluJr4 |
| ADediting_343099 | chr12_40758935_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343100 | chr12_40758961_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343101 | chr12_40758985_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343102 | chr12_40759004_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343103 | chr12_40759030_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343104 | chr12_40759033_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343105 | chr12_40759043_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343106 | chr12_40759086_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343107 | chr12_40759113_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343108 | chr12_40759118_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343109 | chr12_40759125_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343110 | chr12_40759126_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343111 | chr12_40759156_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343112 | chr12_40759184_+ | SINE | Alu | Name=AluSq2 |
| ADediting_343113 | chr12_40759497_+ | SINE | Alu | Name=AluJo |
| ADediting_343114 | chr12_40759552_+ | SINE | Alu | Name=AluJo |
| ADediting_343115 | chr12_40759559_+ | SINE | Alu | Name=AluJo |
| ADediting_343116 | chr12_40759591_+ | SINE | Alu | Name=AluJo |
| ADediting_343117 | chr12_40759592_+ | SINE | Alu | Name=AluJo |
| ADediting_343118 | chr12_40759595_+ | SINE | Alu | Name=AluJo |
| ADediting_343119 | chr12_40759599_+ | SINE | Alu | Name=AluJo |
| ADediting_343120 | chr12_40759605_+ | SINE | Alu | Name=AluJo |
| ADediting_343121 | chr12_40759607_+ | SINE | Alu | Name=AluJo |
| ADediting_343122 | chr12_40759623_+ | SINE | Alu | Name=AluJo |
| ADediting_343123 | chr12_40759652_+ | SINE | Alu | Name=AluJo |
| ADediting_343124 | chr12_40759678_+ | SINE | Alu | Name=AluJo |
| ADediting_343125 | chr12_40762873_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_343126 | chr12_40762947_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_343127 | chr12_40763094_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_343128 | chr12_40763131_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_343129 | chr12_40763133_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_343130 | chr12_40764468_+ | LTR | ERV1 | Name=MER67D |
| ADediting_343131 | chr12_40764501_+ | LTR | ERV1 | Name=MER67D |
| ADediting_343132 | chr12_40766102_+ | SINE | Alu | Name=AluSz |
| ADediting_343133 | chr12_40766133_+ | SINE | Alu | Name=AluSz |
| ADediting_343134 | chr12_40766149_+ | SINE | Alu | Name=AluSz |
| ADediting_343135 | chr12_40766171_+ | SINE | Alu | Name=AluSz |
| ADediting_343136 | chr12_40766180_+ | SINE | Alu | Name=AluSz |
| ADediting_343137 | chr12_40766182_+ | SINE | Alu | Name=AluSz |
| ADediting_343138 | chr12_40766193_+ | SINE | Alu | Name=AluSz |
| ADediting_343139 | chr12_40766202_+ | SINE | Alu | Name=AluSz |
| ADediting_343140 | chr12_40766236_+ | SINE | Alu | Name=AluSz |
| ADediting_343141 | chr12_40766237_+ | SINE | Alu | Name=AluSz |
| ADediting_343142 | chr12_40766246_+ | SINE | Alu | Name=AluSz |
| ADediting_343143 | chr12_40766254_+ | SINE | Alu | Name=AluSz |
| ADediting_343144 | chr12_40766259_+ | SINE | Alu | Name=AluSz |
| ADediting_343145 | chr12_40766263_+ | SINE | Alu | Name=AluSz |
| ADediting_343146 | chr12_40766286_+ | SINE | Alu | Name=AluSz |
| ADediting_343147 | chr12_40766298_+ | SINE | Alu | Name=AluSz |
| ADediting_343148 | chr12_40766307_+ | SINE | Alu | Name=AluSz |
| ADediting_343149 | chr12_40766312_+ | SINE | Alu | Name=AluSz |
| ADediting_343150 | chr12_40766346_+ | SINE | Alu | Name=AluSz |
| ADediting_343151 | chr12_40766347_+ | SINE | Alu | Name=AluSz |
| ADediting_343152 | chr12_40767470_+ | SINE | Alu | Name=AluYf1 |
| ADediting_343153 | chr12_40767484_+ | SINE | Alu | Name=AluYf1 |
| ADediting_343154 | chr12_40767507_+ | SINE | Alu | Name=AluYf1 |
| ADediting_343155 | chr12_40767569_+ | SINE | Alu | Name=AluYf1 |
| ADediting_343156 | chr12_40767582_+ | SINE | Alu | Name=AluYf1 |
| ADediting_343157 | chr12_40767588_+ | SINE | Alu | Name=AluYf1 |
| ADediting_343158 | chr12_40785844_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_343159 | chr12_40833189_+ | SINE | Alu | Name=AluSx |
| ADediting_343160 | chr12_40846236_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343161 | chr12_40846347_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343162 | chr12_40846353_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343163 | chr12_40846409_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343164 | chr12_40846413_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343165 | chr12_40846418_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343166 | chr12_40846455_+ | SINE | Alu | Name=AluYe5 |
| ADediting_343167 | chr12_40846761_+ | SINE | Alu | Name=AluSc8 |
| ADediting_343168 | chr12_40846844_+ | SINE | Alu | Name=AluSc8 |
| ADediting_343169 | chr12_40847007_+ | SINE | Alu | Name=AluSg |
| ADediting_343170 | chr12_40847051_+ | SINE | Alu | Name=AluSg |
| ADediting_343171 | chr12_40847901_+ | DNA | hAT-Charlie | Name=MER1B |
| ADediting_343172 | chr12_40858706_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343173 | chr12_40858745_+ | LINE | L1 | Name=L1PA10 |
| ADediting_343174 | chr12_40862350_+ | DNA | hAT-Charlie | Name=MER1B |
| ADediting_343175 | chr12_40864705_+ | LINE | L1 | Name=L1MB7 |
| ADediting_343217 | chr12_40899699_+ | DNA | hAT-Charlie | Name=MER5A1 |
| ADediting_343218 | chr12_40899712_+ | DNA | hAT-Charlie | Name=MER5A1 |
| ADediting_343225 | chr12_40901338_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_343226 | chr12_40901491_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_343227 | chr12_40901500_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_343228 | chr12_40901502_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_343229 | chr12_40901514_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_343231 | chr12_40906779_+ | SINE | Alu | Name=AluSq |
| ADediting_343232 | chr12_40974382_+ | SINE | Alu | Name=AluJb |
| ADediting_343233 | chr12_40974386_+ | SINE | Alu | Name=AluJb |
| ADediting_343234 | chr12_40974392_+ | SINE | Alu | Name=AluJb |
| ADediting_343235 | chr12_40974400_+ | SINE | Alu | Name=AluJb |
| ADediting_343236 | chr12_40974401_+ | SINE | Alu | Name=AluJb |
| ADediting_343237 | chr12_40974411_+ | SINE | Alu | Name=AluJb |
| ADediting_343238 | chr12_40977988_+ | SINE | Alu | Name=AluSx |
| ADediting_343239 | chr12_40978000_+ | SINE | Alu | Name=AluSx |
| ADediting_343240 | chr12_40978012_+ | SINE | Alu | Name=AluSx |
| ADediting_343241 | chr12_40978025_+ | SINE | Alu | Name=AluSx |
| ADediting_343242 | chr12_40978041_+ | SINE | Alu | Name=AluSx |
| ADediting_343243 | chr12_41032288_+ | SINE | Alu | Name=AluYc |
| ADediting_343244 | chr12_41032319_+ | SINE | Alu | Name=AluYc |
| ADediting_343245 | chr12_41032328_+ | SINE | Alu | Name=AluYc |
| ADediting_343246 | chr12_41032350_+ | SINE | Alu | Name=AluYc |
| ADediting_343247 | chr12_41038083_+ | SINE | Alu | Name=AluSz |
| ADediting_343248 | chr12_41049934_+ | SINE | Alu | Name=AluSx |
| ADediting_343249 | chr12_41049958_+ | SINE | Alu | Name=AluSx |
| ADediting_343250 | chr12_41049961_+ | SINE | Alu | Name=AluSx |
| ADediting_343251 | chr12_41049963_+ | SINE | Alu | Name=AluSx |
| ADediting_343252 | chr12_41063908_+ | SINE | Alu | Name=AluY |
| ADediting_343253 | chr12_41063939_+ | SINE | Alu | Name=AluY |
| ADediting_1532282 | chr12_40698497_+ | SINE | Alu | Name=AluY |
| ADediting_1532283 | chr12_40698510_+ | SINE | Alu | Name=AluY |
| ADediting_1532284 | chr12_40702571_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1532285 | chr12_40702579_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1532286 | chr12_40702645_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1532287 | chr12_40755619_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1532288 | chr12_40833175_+ | SINE | Alu | Name=AluSx |
| ADediting_1532289 | chr12_40833188_+ | SINE | Alu | Name=AluSx |
| ADediting_1613552 | chr12_40702597_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1613553 | chr12_40702610_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1613554 | chr12_40705726_+ | LTR | ERVL-MaLR | Name=MSTA |
| ADediting_1613555 | chr12_40719881_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1613556 | chr12_40720082_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1613557 | chr12_40720701_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1613558 | chr12_40720750_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1613559 | chr12_40720841_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1613560 | chr12_40753405_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_1613561 | chr12_40753573_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_1613562 | chr12_40753644_+ | LTR | ERVL-MaLR | Name=THE1C |
| ADediting_1613563 | chr12_40755457_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1613564 | chr12_40759178_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1613565 | chr12_40764476_+ | LTR | ERV1 | Name=MER67D |
| ADediting_1613566 | chr12_40764500_+ | LTR | ERV1 | Name=MER67D |
| ADediting_1613567 | chr12_40785824_+ | LTR | ERVL-MaLR | Name=MSTB |
| ADediting_1613568 | chr12_40846448_+ | SINE | Alu | Name=AluYe5 |
| ADediting_1613569 | chr12_40846831_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1613570 | chr12_40846997_+ | SINE | Alu | Name=AluSg |
| ADediting_1613571 | chr12_40847042_+ | SINE | Alu | Name=AluSg |
| ADediting_1613572 | chr12_40847113_+ | SINE | Alu | Name=AluSg |
| ADediting_1613573 | chr12_40847912_+ | DNA | hAT-Charlie | Name=MER1B |
| ADediting_1613574 | chr12_40863589_+ | DNA | hAT-Charlie | Name=MER1B |
| ADediting_1613599 | chr12_40899708_+ | DNA | hAT-Charlie | Name=MER5A1 |
| ADediting_1613600 | chr12_40899770_+ | DNA | hAT-Charlie | Name=MER5A1 |
| ADediting_1613601 | chr12_40899840_+ | DNA | hAT-Charlie | Name=MER5A1 |
| ADediting_1613602 | chr12_40899842_+ | DNA | hAT-Charlie | Name=MER5A1 |
| ADediting_1613610 | chr12_40901155_+ | SINE | MIR | Name=MIRb |
| ADediting_1613616 | chr12_40901471_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_1613617 | chr12_40901497_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_1613618 | chr12_40901501_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_1613619 | chr12_40901508_+ | DNA | hAT-Charlie | Name=MER5A |
| ADediting_1613623 | chr12_40906849_+ | SINE | Alu | Name=AluSq |
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RNA A-to-I editing events in the alternative splicing sites for CNTN1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CNTN1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for CNTN1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for CNTN1 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-337-3p | chr12 | 41071505 | 41071512 | 8mer-1a | 41071492 | 41071512 | 152 | -10.5 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000018236.15 | ENST00000547702.5 | CNTN1-203 | hsa-miR-337-3p | chr12 | 40971863 | 40971869 | 7mer-m8 | 40971849 | 40971870 | 167 | -21.94 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000018236.15 | ENST00000547849.5 | CNTN1-204 | hsa-miR-337-3p | chr12 | 40971863 | 40971869 | 7mer-m8 | 40971849 | 40971870 | 167 | -21.94 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-337-3p | chr12 | 41071505 | 41071512 | 8mer-1a | 41071492 | 41071512 | 152 | -10.5 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-381-3p | chr12 | 41071807 | 41071814 | 8mer-1a | 41071793 | 41071814 | 145 | -19 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-381-3p | chr12 | 41071807 | 41071814 | 8mer-1a | 41071793 | 41071814 | 145 | -19 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000547702.5 | CNTN1-203 | hsa-miR-641 | chr12 | 40971779 | 40971785 | 7mer-m8 | 40971762 | 40971786 | 152 | -15.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000547849.5 | CNTN1-204 | hsa-miR-641 | chr12 | 40971779 | 40971785 | 7mer-m8 | 40971762 | 40971786 | 152 | -15.03 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-5579-3p | chr12 | 41070130 | 41070137 | 8mer-1a | 41070113 | 41070137 | 158 | -21.31 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000348761.2 | CNTN1-202 | hsa-miR-5579-3p | chr12 | 41070130 | 41070137 | 8mer-1a | 41070113 | 41070137 | 158 | -21.31 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000547702.5 | CNTN1-203 | hsa-miR-5579-3p | chr12 | 40972174 | 40972180 | 7mer-m8 | 40972160 | 40972181 | 140 | -10.19 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000547849.5 | CNTN1-204 | hsa-miR-5579-3p | chr12 | 40972174 | 40972180 | 7mer-m8 | 40972160 | 40972181 | 140 | -10.19 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-5579-3p | chr12 | 41070130 | 41070137 | 8mer-1a | 41070113 | 41070137 | 158 | -21.31 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-4775 | chr12 | 41070809 | 41070815 | 7mer-m8 | 41070794 | 41070816 | 148 | -4.4 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-4775 | chr12 | 41070809 | 41070815 | 7mer-m8 | 41070794 | 41070816 | 148 | -4.4 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-5581-3p | chr12 | 41071322 | 41071329 | 8mer-1a | 41071307 | 41071329 | 149 | -18.02 |
| ADediting_107020 | chr1_37500952_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-5581-3p | chr12 | 41071322 | 41071329 | 8mer-1a | 41071307 | 41071329 | 149 | -18.02 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-641 | chr12 | 41071229 | 41071235 | 7mer-m8 | 41071214 | 41071236 | 152 | -19.32 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-641 | chr12 | 41071778 | 41071784 | 7mer-m8 | 41071762 | 41071785 | 140 | -8.71 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-641 | chr12 | 41072390 | 41072397 | 8mer-1a | 41072374 | 41072397 | 142 | -8.48 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-641 | chr12 | 41071229 | 41071235 | 7mer-m8 | 41071214 | 41071236 | 152 | -19.32 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-641 | chr12 | 41071778 | 41071784 | 7mer-m8 | 41071762 | 41071785 | 140 | -8.71 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-641 | chr12 | 41072390 | 41072397 | 8mer-1a | 41072374 | 41072397 | 142 | -8.48 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-641 | chr12 | 41071229 | 41071235 | 7mer-m8 | 41071214 | 41071236 | 152 | -19.32 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-641 | chr12 | 41071778 | 41071784 | 7mer-m8 | 41071762 | 41071785 | 140 | -8.71 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-641 | chr12 | 41072390 | 41072397 | 8mer-1a | 41072374 | 41072397 | 142 | -8.48 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-641 | chr12 | 41071229 | 41071235 | 7mer-m8 | 41071214 | 41071236 | 152 | -19.32 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-641 | chr12 | 41071778 | 41071784 | 7mer-m8 | 41071762 | 41071785 | 140 | -8.71 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-641 | chr12 | 41072390 | 41072397 | 8mer-1a | 41072374 | 41072397 | 142 | -8.48 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000547702.5 | CNTN1-203 | hsa-miR-5579-3p | chr12 | 40971959 | 40971966 | 8mer-1a | 40971945 | 40971966 | 143 | -10.04 |
| ADediting_286380 | chr11_79422188_- | ENSG00000018236.15 | ENST00000547849.5 | CNTN1-204 | hsa-miR-5579-3p | chr12 | 40971959 | 40971966 | 8mer-1a | 40971945 | 40971966 | 143 | -10.04 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-5585-3p | chr12 | 41070158 | 41070165 | 8mer-1a | 41070146 | 41070165 | 145 | -8.4 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000018236.15 | ENST00000348761.2 | CNTN1-202 | hsa-miR-5585-3p | chr12 | 41070158 | 41070165 | 8mer-1a | 41070146 | 41070165 | 145 | -8.4 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000018236.15 | ENST00000547702.5 | CNTN1-203 | hsa-miR-5585-3p | chr12 | 40971898 | 40971904 | 7mer-1a | 40971881 | 40971904 | 142 | -9.88 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000018236.15 | ENST00000547849.5 | CNTN1-204 | hsa-miR-5585-3p | chr12 | 40971898 | 40971904 | 7mer-1a | 40971881 | 40971904 | 142 | -9.88 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-5585-3p | chr12 | 41070158 | 41070165 | 8mer-1a | 41070146 | 41070165 | 145 | -8.4 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000018236.15 | ENST00000347616.5 | CNTN1-201 | hsa-miR-5585-3p | chr12 | 41070158 | 41070165 | 8mer-1a | 41070146 | 41070165 | 145 | -8.4 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000018236.15 | ENST00000348761.2 | CNTN1-202 | hsa-miR-5585-3p | chr12 | 41070158 | 41070165 | 8mer-1a | 41070146 | 41070165 | 145 | -8.4 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000018236.15 | ENST00000547702.5 | CNTN1-203 | hsa-miR-5585-3p | chr12 | 40971898 | 40971904 | 7mer-1a | 40971881 | 40971904 | 142 | -9.88 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000018236.15 | ENST00000547849.5 | CNTN1-204 | hsa-miR-5585-3p | chr12 | 40971898 | 40971904 | 7mer-1a | 40971881 | 40971904 | 142 | -9.88 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000018236.15 | ENST00000551295.7 | CNTN1-208 | hsa-miR-5585-3p | chr12 | 41070158 | 41070165 | 8mer-1a | 41070146 | 41070165 | 145 | -8.4 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for CNTN1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000548005.5 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_343128 | ENST00000548005.5 | chr12_40763131_+ | 155 | -120.30 | -120.20 | -121.00 |
| ADediting_343129 | ENST00000548005.5 | chr12_40763133_+ | 157 | -120.60 | -120.20 | -121.00 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CNTN1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_342942 | chr12_40698443_+ | 0.938368260180161 | -0.00440932362269901 | 0.0650942900548077 | -0.104901354834161 | 1.75983309895169e-11 | 0.369805382924847 |
| DLPFC | ADediting_342958 | chr12_40702679_+ | 0.744208754781156 | 0.0186052979623206 | 0.117418212242965 | -0.0891089364518172 | 3.96127683606366e-11 | 0.3637108425757 |
| STG | ADediting_342981 | chr12_40719874_+ | 0.125952565644447 | 0.16829333948054 | 0.00212481791515103 | 0.330676471149988 | 0.639312435822776 | 0.0518779115365352 |
| STG | ADediting_342982 | chr12_40719905_+ | 0.0102493846746005 | 0.278717321529589 | 3.06790697137826e-06 | 0.484167692854887 | 0.314282261805801 | -0.111118356562141 |
| STG | ADediting_342985 | chr12_40719937_+ | 0.000198272061400649 | 0.395273637225924 | 0.00528718920130557 | 0.301699715106561 | 0.032593575709444 | 0.233437714223426 |
| STG | ADediting_342990 | chr12_40719977_+ | 0.00487733314704894 | 0.304381426369883 | 0.0453066049350205 | 0.219035936291707 | 0.356536594314078 | 0.101861063496872 |
| STG | ADediting_342994 | chr12_40720074_+ | 0.00398213883772181 | 0.311015403799503 | 0.000101887770030251 | 0.411244354393313 | 0.929667729183755 | 0.00977653343626148 |
| STG | ADediting_343026 | chr12_40726320_+ | 0.0037423878361815 | 0.313017554664644 | 0.0031185699307662 | 0.318820576974081 | 0.841894431063667 | 0.0220924319193008 |
| STG | ADediting_343041 | chr12_40726621_+ | 0.172170122864143 | 0.150367109404907 | 0.000383917113720228 | 0.378581144388222 | 0.308613684702313 | -0.112419518742119 |
| TCX | ADediting_343240 | chr12_40978012_+ | 0.00208706768187892 | 0.249384940867289 | 0.264251655764153 | -0.0917285738824563 | 0.000119244810340342 | 0.309021547181439 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.05305629793307e-40 | 0.659825416739617 | 8.05014833070992e-22 | 0.508844282083713 | 0.962373580624284 | 0.00269023525891427 |
| AC | 3.20520799770766e-68 | 0.841363535941548 | 1.35194839266977e-46 | 0.750959933546948 | 4.49605629851722e-18 | 0.511548298535879 |
| PCC | 2.37777941489837e-51 | 0.836883909710683 | 3.6077536499268e-41 | 0.785028907875145 | 0.0023799744555734 | 0.218606127428158 |
| CER | 1.13520489524814e-48 | 0.875793898398156 | 1.0573644444815e-19 | 0.654481892216738 | 0.0141543359166824 | 0.19995839557326 |
| TCX | 7.34152284764481e-36 | 0.808255086536651 | 5.31204072194522e-15 | 0.582501133438025 | 0.24959851165571 | 0.094585633870417 |
| FP | 1.60373823486305e-15 | 0.550973367821032 | 2.21513629217388e-25 | 0.67874598885401 | 0.595619778866796 | 0.0400445573410099 |
| IFG | 0.000366137560986791 | 0.656391366059481 | 0.0288434580293919 | 0.43723550302073 | 0.479286761868009 | -0.14829694297817 |
| PG | 2.21693012803881e-54 | 0.855093731226709 | 9.30926133141093e-27 | 0.681637662099674 | 0.693338781367524 | -0.0291036128594637 |
| STG | 6.42263334566572e-17 | 0.758542737756952 | 5.36954573954467e-14 | 0.707440767749917 | 0.953128644120819 | 0.00651073432157719 |
Top |
Relation with AD stages for CNTN1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_342960 | chr12_40702716_+ | 0.0354713369979928 | 0.422303326441651 |
| IFG | ADediting_342985 | chr12_40719937_+ | 0.016095121166638 | 0.476266928956639 |
| IFG | ADediting_342989 | chr12_40719967_+ | 0.0442004152499221 | 0.405711162898027 |
| IFG | ADediting_342990 | chr12_40719977_+ | 0.0387176849807944 | 0.415790006692857 |
| IFG | ADediting_343006 | chr12_40720725_+ | 0.0254417689364406 | 0.446000934681815 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000462543024692402 | 0.331228495639083 |
| TCX | 0.000194353968604453 | 0.3543113849821 |
Top |
RelatedDrugs for CNTN1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CNTN1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| CNTN1 | C0270960 | Congenital myopathy (disorder) | 1 | GENOMICS_ENGLAND |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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