|
||||||
|
![]() | |
![]() | |
![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
![]() | |
![]() | |
![]() | The effects of the RNA editing to the stability of the RNA structures |
![]() | |
![]() | |
![]() | |
![]() |
Gene summary for EID2B |
Gene summary |
| Gene information | Gene symbol | EID2B | Gene ID | 126272 |
| Gene name | EP300 interacting inhibitor of differentiation 2B | |
| Synonyms | EID-2B|EID-3 | |
| Cytomap | 19q13.2 | |
| Type of gene | protein-coding | |
| Description | EP300-interacting inhibitor of differentiation 2BEID-2-like inhibitor of differentiation-3 | |
| Modification date | 20200313 | |
| UniProtAcc | Q96D98, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| EID2B | GO:0045662 | negative regulation of myoblast differentiation | 15970276 |
| EID2B | GO:0045892 | negative regulation of transcription, DNA-templated | 15970276 |
Top |
RNA A-to-I events for EID2B |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
![]() |
RNA editing frequencies across three data sets. |
![]() |
The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
![]() |
RNA A-to-I editing events in AD. |
| ADediting_750000(39531209, -), ADediting_750001(39531241, -), ADediting_750002(39531246, -), ADediting_750003(39531247, -), ADediting_750004(39531271, -), ADediting_750005(39531302, -), ADediting_750006(39531306, -), ADediting_750007(39531312, -), ADediting_750008(39531322, -), ADediting_750009(39531337, -), ADediting_750010(39531338, -), ADediting_750011(39531341, -), ADediting_750012(39531343, -), ADediting_750013(39531345, -), ADediting_750014(39531346, -), ADediting_750015(39531348, -), ADediting_750016(39531355, -), ADediting_750017(39531366, -), ADediting_750018(39531368, -), ADediting_750019(39531392, -), ADediting_750020(39531400, -), ADediting_750021(39531410, -), ADediting_750022(39531446, -), ADediting_750023(39532038, -), ADediting_750024(39532086, -), ADediting_1555967(39531344, -), ADediting_1555968(39531367, -), |
Top |
RNA editing positional annotations for EID2B using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_750000 | chr19_39531209_- | UTR3 |
| ADediting_750001 | chr19_39531241_- | UTR3 |
| ADediting_750002 | chr19_39531246_- | UTR3 |
| ADediting_750003 | chr19_39531247_- | UTR3 |
| ADediting_750004 | chr19_39531271_- | UTR3 |
| ADediting_750005 | chr19_39531302_- | UTR3 |
| ADediting_750006 | chr19_39531306_- | UTR3 |
| ADediting_750007 | chr19_39531312_- | UTR3 |
| ADediting_750008 | chr19_39531322_- | UTR3 |
| ADediting_750009 | chr19_39531337_- | UTR3 |
| ADediting_750010 | chr19_39531338_- | UTR3 |
| ADediting_750011 | chr19_39531341_- | UTR3 |
| ADediting_750012 | chr19_39531343_- | UTR3 |
| ADediting_750013 | chr19_39531345_- | UTR3 |
| ADediting_750014 | chr19_39531346_- | UTR3 |
| ADediting_750015 | chr19_39531348_- | UTR3 |
| ADediting_750016 | chr19_39531355_- | UTR3 |
| ADediting_750017 | chr19_39531366_- | UTR3 |
| ADediting_750018 | chr19_39531368_- | UTR3 |
| ADediting_750019 | chr19_39531392_- | UTR3 |
| ADediting_750020 | chr19_39531400_- | UTR3 |
| ADediting_750021 | chr19_39531410_- | UTR3 |
| ADediting_750022 | chr19_39531446_- | UTR3 |
| ADediting_750023 | chr19_39532038_- | UTR3 |
| ADediting_750024 | chr19_39532086_- | UTR3 |
| ADediting_1555967 | chr19_39531344_- | UTR3 |
| ADediting_1555968 | chr19_39531367_- | UTR3 |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_750000 | chr19_39531209_- | SINE | Alu | Name=AluSx |
| ADediting_750001 | chr19_39531241_- | SINE | Alu | Name=AluSx |
| ADediting_750002 | chr19_39531246_- | SINE | Alu | Name=AluSx |
| ADediting_750003 | chr19_39531247_- | SINE | Alu | Name=AluSx |
| ADediting_750004 | chr19_39531271_- | SINE | Alu | Name=AluSx |
| ADediting_750005 | chr19_39531302_- | SINE | Alu | Name=AluSx |
| ADediting_750006 | chr19_39531306_- | SINE | Alu | Name=AluSx |
| ADediting_750007 | chr19_39531312_- | SINE | Alu | Name=AluSx |
| ADediting_750008 | chr19_39531322_- | SINE | Alu | Name=AluSx |
| ADediting_750009 | chr19_39531337_- | SINE | Alu | Name=AluSx |
| ADediting_750010 | chr19_39531338_- | SINE | Alu | Name=AluSx |
| ADediting_750011 | chr19_39531341_- | SINE | Alu | Name=AluSx |
| ADediting_750012 | chr19_39531343_- | SINE | Alu | Name=AluSx |
| ADediting_750013 | chr19_39531345_- | SINE | Alu | Name=AluSx |
| ADediting_750014 | chr19_39531346_- | SINE | Alu | Name=AluSx |
| ADediting_750015 | chr19_39531348_- | SINE | Alu | Name=AluSx |
| ADediting_750016 | chr19_39531355_- | SINE | Alu | Name=AluSx |
| ADediting_750017 | chr19_39531366_- | SINE | Alu | Name=AluSx |
| ADediting_750018 | chr19_39531368_- | SINE | Alu | Name=AluSx |
| ADediting_750019 | chr19_39531392_- | SINE | Alu | Name=AluSx |
| ADediting_750020 | chr19_39531400_- | SINE | Alu | Name=AluSx |
| ADediting_750021 | chr19_39531410_- | SINE | Alu | Name=AluSx |
| ADediting_750022 | chr19_39531446_- | SINE | Alu | Name=AluSx |
| ADediting_750023 | chr19_39532038_- | SINE | Alu | Name=AluJo |
| ADediting_750024 | chr19_39532086_- | SINE | Alu | Name=AluJo |
| ADediting_1555967 | chr19_39531344_- | SINE | Alu | Name=AluSx |
| ADediting_1555968 | chr19_39531367_- | SINE | Alu | Name=AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for EID2B |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for EID2B |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
![]() | |
![]() | |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
![]() |
- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
![]() |
![]() |
![]() |
![]() |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for EID2B |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for EID2B |
RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
![]() |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-1229-3p | chr19 | 39531366 | 39531372 | 7mer-m8 | 39531365 | 39531389 | 146 | -16.14 |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6511a-3p | chr19 | 39531366 | 39531373 | 8mer-1a | 39531366 | 39531387 | 145 | -15.2 |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6511b-3p | chr19 | 39531366 | 39531373 | 8mer-1a | 39531366 | 39531388 | 140 | -13.68 |
| ADediting_750002 | chr19_39531246_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-24-1-5p | chr19 | 39531244 | 39531250 | 7mer-m8 | 39531243 | 39531265 | 148 | -18.78 |
| ADediting_750002 | chr19_39531246_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-24-2-5p | chr19 | 39531244 | 39531250 | 7mer-m8 | 39531243 | 39531265 | 148 | -17.31 |
| ADediting_750003 | chr19_39531247_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-1304-3p | chr19 | 39531245 | 39531251 | 7mer-m8 | 39531244 | 39531265 | 167 | -29.35 |
| ADediting_750003 | chr19_39531247_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4284 | chr19 | 39531243 | 39531249 | 7mer-m8 | 39531242 | 39531259 | 151 | -17.62 |
| ADediting_750004 | chr19_39531271_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-9900 | chr19 | 39531266 | 39531272 | 7mer-m8 | 39531265 | 39531284 | 155 | -17.1 |
| ADediting_750005 | chr19_39531302_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-1207-3p | chr19 | 39531302 | 39531308 | 7mer-m8 | 39531301 | 39531319 | 145 | -13.56 |
| ADediting_750005 | chr19_39531302_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-646 | chr19 | 39531300 | 39531306 | 7mer-m8 | 39531299 | 39531319 | 148 | -18.56 |
| ADediting_750008 | chr19_39531322_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4783-5p | chr19 | 39531319 | 39531325 | 7mer-m8 | 39531318 | 39531339 | 157 | -27.7 |
| ADediting_750009 | chr19_39531337_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4735-5p | chr19 | 39531337 | 39531343 | 7mer-m8 | 39531336 | 39531357 | 140 | -9.23 |
| ADediting_750013 | chr19_39531345_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4482-3p | chr19 | 39531342 | 39531349 | 8mer-1a | 39531342 | 39531362 | 165 | -18.49 |
| ADediting_750014 | chr19_39531346_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-153-5p | chr19 | 39531345 | 39531352 | 8mer-1a | 39531345 | 39531367 | 148 | -9.92 |
| ADediting_750014 | chr19_39531346_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-335-3p | chr19 | 39531341 | 39531348 | 8mer-1a | 39531341 | 39531362 | 152 | -8.27 |
| ADediting_750015 | chr19_39531348_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-5003-3p | chr19 | 39531346 | 39531353 | 8mer-1a | 39531346 | 39531365 | 151 | -21.31 |
| ADediting_750016 | chr19_39531355_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4756-3p | chr19 | 39531355 | 39531361 | 7mer-m8 | 39531354 | 39531373 | 151 | -16.82 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-412-3p | chr19 | 39531366 | 39531372 | 7mer-m8 | 39531365 | 39531387 | 151 | -16.53 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6754-3p | chr19 | 39531366 | 39531372 | 7mer-m8 | 39531365 | 39531385 | 144 | -15.76 |
| ADediting_750018 | chr19_39531368_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-23a-5p | chr19 | 39531363 | 39531369 | 7mer-m8 | 39531362 | 39531384 | 144 | -21.43 |
| ADediting_750018 | chr19_39531368_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-23b-5p | chr19 | 39531363 | 39531369 | 7mer-m8 | 39531362 | 39531382 | 156 | -19.96 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-513a-5p | chr19 | 39531445 | 39531451 | 7mer-m8 | 39531444 | 39531461 | 140 | -15.44 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-638 | chr19 | 39531440 | 39531446 | 7mer-1a | 39531440 | 39531464 | 158 | -34.33 |
| ADediting_750023 | chr19_39532038_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4751 | chr19 | 39532033 | 39532039 | 7mer-m8 | 39532032 | 39532056 | 147 | -20.16 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-3183 | chr19 | 39532085 | 39532091 | 7mer-m8 | 39532084 | 39532105 | 140 | -13.24 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4723-3p | chr19 | 39532085 | 39532091 | 7mer-m8 | 39532084 | 39532105 | 141 | -17.75 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6769b-3p | chr19 | 39532085 | 39532091 | 7mer-m8 | 39532084 | 39532104 | 146 | -18.55 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6826-3p | chr19 | 39532082 | 39532088 | 7mer-m8 | 39532081 | 39532102 | 157 | -24.22 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6892-3p | chr19 | 39532084 | 39532090 | 7mer-m8 | 39532083 | 39532103 | 140 | -15.35 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-193b-5p | chr19 | 39531361 | 39531368 | 8mer-1a | 39531361 | 39531382 | 142 | -15.74 |
| ADediting_750000 | chr19_39531209_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-1267 | chr19 | 39531207 | 39531214 | 8mer-1a | 39531207 | 39531227 | 140 | -10.13 |
| ADediting_750000 | chr19_39531209_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-3664-5p | chr19 | 39531205 | 39531211 | 7mer-m8 | 39531204 | 39531222 | 142 | -10.71 |
| ADediting_750001 | chr19_39531241_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4638-5p | chr19 | 39531239 | 39531246 | 8mer-1a | 39531239 | 39531260 | 144 | -16.16 |
| ADediting_750007 | chr19_39531312_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-8052 | chr19 | 39531306 | 39531312 | 7mer-1a | 39531306 | 39531326 | 145 | -19.83 |
| ADediting_750008 | chr19_39531322_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-1227-3p | chr19 | 39531321 | 39531327 | 7mer-m8 | 39531320 | 39531339 | 147 | -29.48 |
| ADediting_750008 | chr19_39531322_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4715-3p | chr19 | 39531322 | 39531328 | 7mer-m8 | 39531321 | 39531343 | 147 | -23.51 |
| ADediting_750016 | chr19_39531355_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6832-5p | chr19 | 39531354 | 39531360 | 7mer-m8 | 39531353 | 39531375 | 142 | -13.36 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-193b-5p | chr19 | 39531361 | 39531368 | 8mer-1a | 39531361 | 39531382 | 142 | -15.74 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-3170 | chr19 | 39531361 | 39531367 | 7mer-m8 | 39531360 | 39531381 | 140 | -13.8 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6855-5p | chr19 | 39531361 | 39531367 | 7mer-m8 | 39531360 | 39531384 | 145 | -17.8 |
| ADediting_750021 | chr19_39531410_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-125a-3p | chr19 | 39531405 | 39531412 | 8mer-1a | 39531405 | 39531426 | 144 | -20.4 |
| ADediting_750021 | chr19_39531410_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-640 | chr19 | 39531410 | 39531416 | 7mer-m8 | 39531409 | 39531431 | 145 | -19.81 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-10399-5p | chr19 | 39531444 | 39531450 | 7mer-m8 | 39531443 | 39531464 | 145 | -13.06 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-6504-3p | chr19 | 39531444 | 39531450 | 7mer-m8 | 39531443 | 39531464 | 148 | -12.16 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-7151-3p | chr19 | 39531445 | 39531452 | 8mer-1a | 39531445 | 39531464 | 143 | -13.44 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-320a-5p | chr19 | 39532084 | 39532090 | 7mer-m8 | 39532083 | 39532104 | 145 | -13.46 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4287 | chr19 | 39532081 | 39532087 | 7mer-m8 | 39532080 | 39532098 | 140 | -12.08 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-4685-3p | chr19 | 39532081 | 39532087 | 7mer-m8 | 39532080 | 39532102 | 147 | -18.67 |
| ADediting_750024 | chr19_39532086_- | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-5088-3p | chr19 | 39532082 | 39532089 | 8mer-1a | 39532082 | 39532102 | 141 | -14.66 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-1229-3p | chr19 | 39531366 | 39531372 | 7mer-m8 | 39531365 | 39531389 | 146 | -16.14 |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-6511a-3p | chr19 | 39531366 | 39531373 | 8mer-1a | 39531366 | 39531387 | 145 | -15.2 |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-6511b-3p | chr19 | 39531366 | 39531373 | 8mer-1a | 39531366 | 39531388 | 140 | -13.68 |
| ADediting_750009 | chr19_39531337_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-4735-5p | chr19 | 39531337 | 39531343 | 7mer-m8 | 39531337 | 39531357 | 140 | -9.14 |
| ADediting_750013 | chr19_39531345_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-4482-3p | chr19 | 39531342 | 39531349 | 8mer-1a | 39531342 | 39531362 | 165 | -18.49 |
| ADediting_750014 | chr19_39531346_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-153-5p | chr19 | 39531345 | 39531352 | 8mer-1a | 39531345 | 39531367 | 148 | -9.92 |
| ADediting_750014 | chr19_39531346_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-335-3p | chr19 | 39531341 | 39531348 | 8mer-1a | 39531341 | 39531362 | 152 | -8.27 |
| ADediting_750015 | chr19_39531348_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-5003-3p | chr19 | 39531346 | 39531353 | 8mer-1a | 39531346 | 39531365 | 151 | -21.31 |
| ADediting_750016 | chr19_39531355_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-4756-3p | chr19 | 39531355 | 39531361 | 7mer-m8 | 39531354 | 39531373 | 151 | -16.82 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-412-3p | chr19 | 39531366 | 39531372 | 7mer-m8 | 39531365 | 39531387 | 151 | -16.53 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-6754-3p | chr19 | 39531366 | 39531372 | 7mer-m8 | 39531365 | 39531385 | 144 | -15.76 |
| ADediting_750018 | chr19_39531368_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-23a-5p | chr19 | 39531363 | 39531369 | 7mer-m8 | 39531362 | 39531384 | 144 | -21.43 |
| ADediting_750018 | chr19_39531368_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-23b-5p | chr19 | 39531363 | 39531369 | 7mer-m8 | 39531362 | 39531382 | 156 | -19.96 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-513a-5p | chr19 | 39531445 | 39531451 | 7mer-m8 | 39531444 | 39531461 | 140 | -15.44 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-638 | chr19 | 39531440 | 39531446 | 7mer-1a | 39531440 | 39531464 | 158 | -34.33 |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1555968 | chr19_39531367_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-193b-5p | chr19 | 39531361 | 39531368 | 8mer-1a | 39531361 | 39531382 | 142 | -15.74 |
| ADediting_750016 | chr19_39531355_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-6832-5p | chr19 | 39531354 | 39531360 | 7mer-m8 | 39531353 | 39531375 | 142 | -13.36 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-193b-5p | chr19 | 39531361 | 39531368 | 8mer-1a | 39531361 | 39531382 | 142 | -15.74 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-3170 | chr19 | 39531361 | 39531367 | 7mer-m8 | 39531360 | 39531381 | 140 | -13.8 |
| ADediting_750017 | chr19_39531366_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-6855-5p | chr19 | 39531361 | 39531367 | 7mer-m8 | 39531360 | 39531384 | 145 | -17.8 |
| ADediting_750021 | chr19_39531410_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-125a-3p | chr19 | 39531405 | 39531412 | 8mer-1a | 39531405 | 39531426 | 144 | -20.4 |
| ADediting_750021 | chr19_39531410_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-640 | chr19 | 39531410 | 39531416 | 7mer-m8 | 39531409 | 39531431 | 145 | -19.81 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-10399-5p | chr19 | 39531444 | 39531450 | 7mer-m8 | 39531443 | 39531464 | 145 | -13.06 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-6504-3p | chr19 | 39531444 | 39531450 | 7mer-m8 | 39531443 | 39531464 | 148 | -12.16 |
| ADediting_750022 | chr19_39531446_- | ENSG00000176401.6 | ENST00000601837.1 | EID2B-202 | hsa-miR-7151-3p | chr19 | 39531445 | 39531452 | 8mer-1a | 39531445 | 39531464 | 143 | -13.44 |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_98288 | chr1_32086990_+ | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-5585-3p | chr19 | 39531497 | 39531503 | 7mer-m8 | 39531496 | 39531517 | 140 | -7.8 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000176401.6 | ENST00000326282.5 | EID2B-201 | hsa-miR-5585-3p | chr19 | 39531497 | 39531503 | 7mer-m8 | 39531496 | 39531517 | 140 | -7.8 |
Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for EID2B |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000326282.5 | protein_coding | ![]() | ![]() |
| ENST00000601837.1 | lncRNA | ![]() | ![]() |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_750000 | ENST00000326282.5 | chr19_39531209_- | 1644 | -697.67 | -695.17 | -732.87 |
| ADediting_750001 | ENST00000326282.5 | chr19_39531241_- | 1612 | -699.27 | -695.17 | -732.87 |
| ADediting_750002 | ENST00000326282.5 | chr19_39531246_- | 1607 | -699.77 | -695.17 | -732.87 |
| ADediting_750003 | ENST00000326282.5 | chr19_39531247_- | 1606 | -699.77 | -695.17 | -732.87 |
| ADediting_750004 | ENST00000326282.5 | chr19_39531271_- | 1582 | -697.37 | -695.17 | -732.87 |
| ADediting_750005 | ENST00000326282.5 | chr19_39531302_- | 1551 | -695.47 | -695.17 | -732.87 |
| ADediting_750006 | ENST00000326282.5 | chr19_39531306_- | 1547 | -697.67 | -695.17 | -732.87 |
| ADediting_750007 | ENST00000326282.5 | chr19_39531312_- | 1541 | -698.67 | -695.17 | -732.87 |
| ADediting_750008 | ENST00000326282.5 | chr19_39531322_- | 1531 | -696.47 | -695.17 | -732.87 |
| ADediting_750009 | ENST00000326282.5 | chr19_39531337_- | 1516 | -700.07 | -695.17 | -732.87 |
| ADediting_750010 | ENST00000326282.5 | chr19_39531338_- | 1515 | -696.47 | -695.17 | -732.87 |
| ADediting_750011 | ENST00000326282.5 | chr19_39531341_- | 1512 | -696.87 | -695.17 | -732.87 |
| ADediting_750012 | ENST00000326282.5 | chr19_39531343_- | 1510 | -695.17 | -695.17 | -732.87 |
| ADediting_1555967 | ENST00000326282.5 | chr19_39531344_- | 1509 | -695.17 | -695.17 | -732.87 |
| ADediting_750013 | ENST00000326282.5 | chr19_39531345_- | 1508 | -695.17 | -695.17 | -732.87 |
| ADediting_750014 | ENST00000326282.5 | chr19_39531346_- | 1507 | -694.97 | -695.17 | -732.87 |
| ADediting_750015 | ENST00000326282.5 | chr19_39531348_- | 1505 | -696.47 | -695.17 | -732.87 |
| ADediting_750016 | ENST00000326282.5 | chr19_39531355_- | 1498 | -694.87 | -695.17 | -732.87 |
| ADediting_750017 | ENST00000326282.5 | chr19_39531366_- | 1487 | -697.17 | -695.17 | -732.87 |
| ADediting_1555968 | ENST00000326282.5 | chr19_39531367_- | 1486 | -701.57 | -695.17 | -732.87 |
| ADediting_750018 | ENST00000326282.5 | chr19_39531368_- | 1485 | -696.27 | -695.17 | -732.87 |
| ADediting_750019 | ENST00000326282.5 | chr19_39531392_- | 1461 | -698.77 | -695.17 | -732.87 |
| ADediting_750020 | ENST00000326282.5 | chr19_39531400_- | 1453 | -694.37 | -695.17 | -732.87 |
| ADediting_750021 | ENST00000326282.5 | chr19_39531410_- | 1443 | -700.57 | -695.17 | -732.87 |
| ADediting_750022 | ENST00000326282.5 | chr19_39531446_- | 1407 | -695.17 | -695.17 | -732.87 |
| ADediting_750023 | ENST00000326282.5 | chr19_39532038_- | 815 | -694.57 | -695.17 | -732.87 |
| ADediting_750024 | ENST00000326282.5 | chr19_39532086_- | 767 | -696.27 | -695.17 | -732.87 |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_750009 | ENST00000601837.1 | chr19_39531337_- | 281 | -90.30 | -90.30 | -103.40 |
| ADediting_750010 | ENST00000601837.1 | chr19_39531338_- | 280 | -90.30 | -90.30 | -103.40 |
| ADediting_750011 | ENST00000601837.1 | chr19_39531341_- | 277 | -90.30 | -90.30 | -103.40 |
| ADediting_750012 | ENST00000601837.1 | chr19_39531343_- | 275 | -90.30 | -90.30 | -103.40 |
| ADediting_1555967 | ENST00000601837.1 | chr19_39531344_- | 274 | -90.30 | -90.30 | -103.40 |
| ADediting_750013 | ENST00000601837.1 | chr19_39531345_- | 273 | -90.70 | -90.30 | -103.40 |
| ADediting_750014 | ENST00000601837.1 | chr19_39531346_- | 272 | -90.30 | -90.30 | -103.40 |
| ADediting_750015 | ENST00000601837.1 | chr19_39531348_- | 270 | -90.90 | -90.30 | -103.40 |
| ADediting_750016 | ENST00000601837.1 | chr19_39531355_- | 263 | -93.70 | -90.30 | -103.40 |
| ADediting_750017 | ENST00000601837.1 | chr19_39531366_- | 252 | -89.90 | -90.30 | -103.40 |
| ADediting_1555968 | ENST00000601837.1 | chr19_39531367_- | 251 | -91.50 | -90.30 | -103.40 |
| ADediting_750018 | ENST00000601837.1 | chr19_39531368_- | 250 | -88.80 | -90.30 | -103.40 |
| ADediting_750019 | ENST00000601837.1 | chr19_39531392_- | 226 | -90.30 | -90.30 | -103.40 |
| ADediting_750020 | ENST00000601837.1 | chr19_39531400_- | 218 | -89.60 | -90.30 | -103.40 |
| ADediting_750021 | ENST00000601837.1 | chr19_39531410_- | 208 | -89.90 | -90.30 | -103.40 |
| ADediting_750022 | ENST00000601837.1 | chr19_39531446_- | 172 | -90.00 | -90.30 | -103.40 |
Top |
Relation with ADAR for EID2B |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_750007 | chr19_39531312_- | 0.000297924440924522 | 0.29133889701928 | 1.24406767360796e-08 | 0.444171754783299 | 0.00134997668269975 | 0.259374627131626 |
| CER | ADediting_750019 | chr19_39531392_- | 0.0204170411709071 | 0.189182177412594 | 4.2615669026901e-06 | 0.365430566389907 | 0.178846667932514 | 0.110350430607721 |
| TCX | ADediting_750019 | chr19_39531392_- | 0.00502235937606892 | 0.227958850183738 | 9.11757406991337e-06 | 0.353479452092135 | 0.417497268100623 | -0.0666832743372636 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 7.25134971864767e-32 | 0.60132903795752 | 2.51627270432031e-24 | 0.534734871084468 | 1.42292244874346e-19 | 0.483574688693994 |
| AC | 6.79498672922618e-73 | 0.855651022459293 | 4.2861746664019e-69 | 0.84414831840626 | 0.000635738909515936 | 0.214593033246983 |
| PCC | 8.98936708094683e-49 | 0.825227207795142 | 1.89103254880591e-48 | 0.823702539206001 | 0.182067181341972 | 0.0969638590830686 |
| CER | 1.07023391603482e-09 | 0.472079294013188 | 0.000988147896674139 | 0.266298538353262 | 0.0367280112067163 | -0.170721778556583 |
| TCX | 3.80270007409961e-13 | 0.548273699233249 | 1.94029975995036e-18 | 0.636893847162364 | 0.00261774672670411 | -0.244031026796675 |
| FP | 2.82821140263915e-09 | 0.42683387219586 | 5.83288865367913e-14 | 0.524342881371972 | 0.240765724913053 | -0.0883761684349505 |
| IFG | 0.24500490760423 | 0.241413944602906 | 0.843509029648835 | 0.0415938511743414 | 0.0152969525768248 | -0.479474182083098 |
| PG | 6.82921769210846e-17 | 0.562213611646056 | 1.83512070340145e-18 | 0.584956247750167 | 0.0031776926017136 | -0.215215131115819 |
| STG | 3.86539698230319e-18 | 0.776721915534852 | 3.90836159227302e-12 | 0.667941169541129 | 0.701679193588278 | -0.0424113683489667 |
Top |
Relation with AD stages for EID2B |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_750007 | chr19_39531312_- | 1.08745573155797e-05 | 0.409356296319219 |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| PG | 3.22725306756266e-06 | -0.333787976565735 |
| STG | 0.0042873907560723 | -0.30861624439182 |
Top |
RelatedDrugs for EID2B |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for EID2B |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |