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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CPT1C |
 Gene summary |
| Gene information | Gene symbol | CPT1C | Gene ID | 126129 |
| Gene name | carnitine palmitoyltransferase 1C | |
| Synonyms | CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73 | |
| Cytomap | 19q13.33 | |
| Type of gene | protein-coding | |
| Description | carnitine O-palmitoyltransferase 1, brain isoformcarnitine O-palmitoyltransferase I, brain isoformcarnitine palmitoyltransferase I related C | |
| Modification date | 20200313 | |
| UniProtAcc | Q8TCG5, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for CPT1C |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_773935(49692758, +), ADediting_773936(49692827, +), ADediting_773937(49692865, +), ADediting_773938(49692915, +), ADediting_773939(49692943, +), ADediting_773940(49692982, +), ADediting_773941(49692989, +), ADediting_773942(49693018, +), ADediting_773943(49693068, +), ADediting_773944(49693097, +), ADediting_773945(49693102, +), ADediting_773946(49693139, +), ADediting_773947(49693140, +), ADediting_773948(49693152, +), ADediting_773949(49693531, +), ADediting_773950(49693871, +), ADediting_773951(49693881, +), ADediting_773952(49693931, +), ADediting_773953(49693958, +), ADediting_773954(49693971, +), ADediting_773955(49694578, +), ADediting_773956(49695494, +), ADediting_773957(49697702, +), ADediting_773958(49702384, +), ADediting_773959(49702389, +), ADediting_773960(49702409, +), ADediting_773961(49702416, +), ADediting_773962(49702432, +), ADediting_773963(49702440, +), ADediting_773964(49702441, +), ADediting_773965(49702442, +), ADediting_773966(49702453, +), ADediting_773967(49702458, +), ADediting_773968(49702459, +), ADediting_773969(49702462, +), ADediting_773970(49702472, +), ADediting_773971(49702497, +), ADediting_773972(49702500, +), ADediting_773973(49702505, +), ADediting_773974(49702509, +), ADediting_773975(49702516, +), ADediting_773976(49702522, +), ADediting_773977(49702545, +), ADediting_773978(49702566, +), ADediting_773979(49702570, +), ADediting_773980(49702608, +), ADediting_773981(49702639, +), ADediting_773982(49703241, +), ADediting_773983(49703290, +), ADediting_773984(49703664, +), ADediting_773985(49703683, +), ADediting_773986(49703726, +), ADediting_773987(49703733, +), ADediting_773988(49703762, +), ADediting_773989(49703778, +), ADediting_773990(49703799, +), ADediting_773991(49703805, +), ADediting_773992(49703816, +), ADediting_773993(49703842, +), ADediting_773994(49703853, +), ADediting_773995(49703861, +), ADediting_773996(49703868, +), ADediting_773997(49703880, +), ADediting_773998(49703885, +), ADediting_773999(49703902, +), ADediting_774000(49704202, +), ADediting_774001(49704228, +), ADediting_774002(49704241, +), ADediting_774003(49704272, +), ADediting_774004(49704289, +), ADediting_774005(49704294, +), ADediting_774006(49704311, +), ADediting_774007(49704313, +), ADediting_774008(49704352, +), ADediting_774009(49704355, +), ADediting_774010(49704361, +), ADediting_774011(49704381, +), ADediting_774012(49704393, +), ADediting_774013(49704396, +), ADediting_774014(49704406, +), ADediting_774015(49704415, +), ADediting_774016(49704423, +), ADediting_774017(49704432, +), ADediting_774018(49704433, +), ADediting_774019(49704445, +), ADediting_774020(49711155, +), ADediting_774021(49711158, +), ADediting_774022(49711168, +), ADediting_774023(49711174, +), ADediting_774024(49711187, +), ADediting_774025(49711194, +), ADediting_774026(49711223, +), ADediting_774027(49711230, +), ADediting_774028(49711233, +), ADediting_774029(49711235, +), ADediting_774030(49711239, +), ADediting_774031(49711304, +), ADediting_774032(49711316, +), ADediting_774033(49711341, +), ADediting_774034(49711369, +), ADediting_774035(49711381, +), ADediting_774036(49711383, +), ADediting_774037(49712069, +), ADediting_774038(49712212, +), ADediting_774039(49712216, +), ADediting_774040(49712232, +), ADediting_774041(49712251, +), ADediting_774042(49712301, +), ADediting_1557527(49693695, +), ADediting_1557528(49697872, +), ADediting_1557529(49698564, +), ADediting_1557530(49698614, +), ADediting_1557531(49712253, +), |
Top |
RNA editing positional annotations for CPT1C using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_773935 | chr19_49692758_+ | intronic |
| ADediting_773936 | chr19_49692827_+ | intronic |
| ADediting_773937 | chr19_49692865_+ | intronic |
| ADediting_773938 | chr19_49692915_+ | intronic |
| ADediting_773939 | chr19_49692943_+ | intronic |
| ADediting_773940 | chr19_49692982_+ | intronic |
| ADediting_773941 | chr19_49692989_+ | intronic |
| ADediting_773942 | chr19_49693018_+ | intronic |
| ADediting_773943 | chr19_49693068_+ | intronic |
| ADediting_773944 | chr19_49693097_+ | intronic |
| ADediting_773945 | chr19_49693102_+ | intronic |
| ADediting_773946 | chr19_49693139_+ | intronic |
| ADediting_773947 | chr19_49693140_+ | intronic |
| ADediting_773948 | chr19_49693152_+ | intronic |
| ADediting_773949 | chr19_49693531_+ | intronic |
| ADediting_773950 | chr19_49693871_+ | intronic |
| ADediting_773951 | chr19_49693881_+ | intronic |
| ADediting_773952 | chr19_49693931_+ | intronic |
| ADediting_773953 | chr19_49693958_+ | intronic |
| ADediting_773954 | chr19_49693971_+ | intronic |
| ADediting_773955 | chr19_49694578_+ | intronic |
| ADediting_773956 | chr19_49695494_+ | intronic |
| ADediting_773957 | chr19_49697702_+ | intronic |
| ADediting_773958 | chr19_49702384_+ | intronic |
| ADediting_773959 | chr19_49702389_+ | intronic |
| ADediting_773960 | chr19_49702409_+ | intronic |
| ADediting_773961 | chr19_49702416_+ | intronic |
| ADediting_773962 | chr19_49702432_+ | intronic |
| ADediting_773963 | chr19_49702440_+ | intronic |
| ADediting_773964 | chr19_49702441_+ | intronic |
| ADediting_773965 | chr19_49702442_+ | intronic |
| ADediting_773966 | chr19_49702453_+ | intronic |
| ADediting_773967 | chr19_49702458_+ | intronic |
| ADediting_773968 | chr19_49702459_+ | intronic |
| ADediting_773969 | chr19_49702462_+ | intronic |
| ADediting_773970 | chr19_49702472_+ | intronic |
| ADediting_773971 | chr19_49702497_+ | intronic |
| ADediting_773972 | chr19_49702500_+ | intronic |
| ADediting_773973 | chr19_49702505_+ | intronic |
| ADediting_773974 | chr19_49702509_+ | intronic |
| ADediting_773975 | chr19_49702516_+ | intronic |
| ADediting_773976 | chr19_49702522_+ | intronic |
| ADediting_773977 | chr19_49702545_+ | intronic |
| ADediting_773978 | chr19_49702566_+ | intronic |
| ADediting_773979 | chr19_49702570_+ | intronic |
| ADediting_773980 | chr19_49702608_+ | intronic |
| ADediting_773981 | chr19_49702639_+ | intronic |
| ADediting_773982 | chr19_49703241_+ | intronic |
| ADediting_773983 | chr19_49703290_+ | intronic |
| ADediting_773984 | chr19_49703664_+ | intronic |
| ADediting_773985 | chr19_49703683_+ | intronic |
| ADediting_773986 | chr19_49703726_+ | intronic |
| ADediting_773987 | chr19_49703733_+ | intronic |
| ADediting_773988 | chr19_49703762_+ | intronic |
| ADediting_773989 | chr19_49703778_+ | intronic |
| ADediting_773990 | chr19_49703799_+ | intronic |
| ADediting_773991 | chr19_49703805_+ | intronic |
| ADediting_773992 | chr19_49703816_+ | intronic |
| ADediting_773993 | chr19_49703842_+ | intronic |
| ADediting_773994 | chr19_49703853_+ | intronic |
| ADediting_773995 | chr19_49703861_+ | intronic |
| ADediting_773996 | chr19_49703868_+ | intronic |
| ADediting_773997 | chr19_49703880_+ | intronic |
| ADediting_773998 | chr19_49703885_+ | intronic |
| ADediting_773999 | chr19_49703902_+ | intronic |
| ADediting_774000 | chr19_49704202_+ | intronic |
| ADediting_774001 | chr19_49704228_+ | intronic |
| ADediting_774002 | chr19_49704241_+ | intronic |
| ADediting_774003 | chr19_49704272_+ | intronic |
| ADediting_774004 | chr19_49704289_+ | intronic |
| ADediting_774005 | chr19_49704294_+ | intronic |
| ADediting_774006 | chr19_49704311_+ | intronic |
| ADediting_774007 | chr19_49704313_+ | intronic |
| ADediting_774008 | chr19_49704352_+ | intronic |
| ADediting_774009 | chr19_49704355_+ | intronic |
| ADediting_774010 | chr19_49704361_+ | intronic |
| ADediting_774011 | chr19_49704381_+ | intronic |
| ADediting_774012 | chr19_49704393_+ | intronic |
| ADediting_774013 | chr19_49704396_+ | intronic |
| ADediting_774014 | chr19_49704406_+ | intronic |
| ADediting_774015 | chr19_49704415_+ | intronic |
| ADediting_774016 | chr19_49704423_+ | intronic |
| ADediting_774017 | chr19_49704432_+ | intronic |
| ADediting_774018 | chr19_49704433_+ | intronic |
| ADediting_774019 | chr19_49704445_+ | intronic |
| ADediting_774020 | chr19_49711155_+ | intronic |
| ADediting_774021 | chr19_49711158_+ | intronic |
| ADediting_774022 | chr19_49711168_+ | intronic |
| ADediting_774023 | chr19_49711174_+ | intronic |
| ADediting_774024 | chr19_49711187_+ | intronic |
| ADediting_774025 | chr19_49711194_+ | intronic |
| ADediting_774026 | chr19_49711223_+ | intronic |
| ADediting_774027 | chr19_49711230_+ | intronic |
| ADediting_774028 | chr19_49711233_+ | intronic |
| ADediting_774029 | chr19_49711235_+ | intronic |
| ADediting_774030 | chr19_49711239_+ | intronic |
| ADediting_774031 | chr19_49711304_+ | intronic |
| ADediting_774032 | chr19_49711316_+ | intronic |
| ADediting_774033 | chr19_49711341_+ | intronic |
| ADediting_774034 | chr19_49711369_+ | intronic |
| ADediting_774035 | chr19_49711381_+ | intronic |
| ADediting_774036 | chr19_49711383_+ | intronic |
| ADediting_774037 | chr19_49712069_+ | intronic |
| ADediting_774038 | chr19_49712212_+ | intronic |
| ADediting_774039 | chr19_49712216_+ | intronic |
| ADediting_774040 | chr19_49712232_+ | intronic |
| ADediting_774041 | chr19_49712251_+ | intronic |
| ADediting_774042 | chr19_49712301_+ | intronic |
| ADediting_1557527 | chr19_49693695_+ | intronic |
| ADediting_1557528 | chr19_49697872_+ | intronic |
| ADediting_1557529 | chr19_49698564_+ | intronic |
| ADediting_1557530 | chr19_49698614_+ | intronic |
| ADediting_1557531 | chr19_49712253_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_773935 | chr19_49692758_+ | SINE | Alu | Name=AluSg7 |
| ADediting_773936 | chr19_49692827_+ | SINE | Alu | Name=AluSg7 |
| ADediting_773937 | chr19_49692865_+ | SINE | Alu | Name=AluSg7 |
| ADediting_773938 | chr19_49692915_+ | SINE | Alu | Name=AluSz |
| ADediting_773939 | chr19_49692943_+ | SINE | Alu | Name=AluSz |
| ADediting_773940 | chr19_49692982_+ | SINE | Alu | Name=AluSz |
| ADediting_773941 | chr19_49692989_+ | SINE | Alu | Name=AluSz |
| ADediting_773942 | chr19_49693018_+ | SINE | Alu | Name=AluSz |
| ADediting_773943 | chr19_49693068_+ | SINE | Alu | Name=AluSz |
| ADediting_773944 | chr19_49693097_+ | SINE | Alu | Name=AluSz |
| ADediting_773945 | chr19_49693102_+ | SINE | Alu | Name=AluSz |
| ADediting_773946 | chr19_49693139_+ | SINE | Alu | Name=AluSz |
| ADediting_773947 | chr19_49693140_+ | SINE | Alu | Name=AluSz |
| ADediting_773948 | chr19_49693152_+ | SINE | Alu | Name=AluSz |
| ADediting_773950 | chr19_49693871_+ | SINE | Alu | Name=AluY |
| ADediting_773951 | chr19_49693881_+ | SINE | Alu | Name=AluY |
| ADediting_773952 | chr19_49693931_+ | SINE | Alu | Name=AluY |
| ADediting_773953 | chr19_49693958_+ | SINE | Alu | Name=AluY |
| ADediting_773954 | chr19_49693971_+ | SINE | Alu | Name=AluY |
| ADediting_773955 | chr19_49694578_+ | SINE | Alu | Name=AluSx4 |
| ADediting_773956 | chr19_49695494_+ | SINE | Alu | Name=AluSq2 |
| ADediting_773957 | chr19_49697702_+ | SINE | Alu | Name=AluSz |
| ADediting_773958 | chr19_49702384_+ | SINE | Alu | Name=AluSx |
| ADediting_773959 | chr19_49702389_+ | SINE | Alu | Name=AluSx |
| ADediting_773960 | chr19_49702409_+ | SINE | Alu | Name=AluSx |
| ADediting_773961 | chr19_49702416_+ | SINE | Alu | Name=AluSx |
| ADediting_773962 | chr19_49702432_+ | SINE | Alu | Name=AluSx |
| ADediting_773963 | chr19_49702440_+ | SINE | Alu | Name=AluSx |
| ADediting_773964 | chr19_49702441_+ | SINE | Alu | Name=AluSx |
| ADediting_773965 | chr19_49702442_+ | SINE | Alu | Name=AluSx |
| ADediting_773966 | chr19_49702453_+ | SINE | Alu | Name=AluSx |
| ADediting_773967 | chr19_49702458_+ | SINE | Alu | Name=AluSx |
| ADediting_773968 | chr19_49702459_+ | SINE | Alu | Name=AluSx |
| ADediting_773969 | chr19_49702462_+ | SINE | Alu | Name=AluSx |
| ADediting_773970 | chr19_49702472_+ | SINE | Alu | Name=AluSx |
| ADediting_773971 | chr19_49702497_+ | SINE | Alu | Name=AluSx |
| ADediting_773972 | chr19_49702500_+ | SINE | Alu | Name=AluSx |
| ADediting_773973 | chr19_49702505_+ | SINE | Alu | Name=AluSx |
| ADediting_773974 | chr19_49702509_+ | SINE | Alu | Name=AluSx |
| ADediting_773975 | chr19_49702516_+ | SINE | Alu | Name=AluSx |
| ADediting_773976 | chr19_49702522_+ | SINE | Alu | Name=AluSx |
| ADediting_773977 | chr19_49702545_+ | SINE | Alu | Name=AluSx |
| ADediting_773978 | chr19_49702566_+ | SINE | Alu | Name=AluSx |
| ADediting_773979 | chr19_49702570_+ | SINE | Alu | Name=AluSx |
| ADediting_773980 | chr19_49702608_+ | SINE | Alu | Name=AluSx |
| ADediting_773981 | chr19_49702639_+ | SINE | Alu | Name=AluSx |
| ADediting_773982 | chr19_49703241_+ | SINE | Alu | Name=AluYf1 |
| ADediting_773983 | chr19_49703290_+ | SINE | Alu | Name=AluYf1 |
| ADediting_773984 | chr19_49703664_+ | SINE | Alu | Name=AluJr |
| ADediting_773985 | chr19_49703683_+ | SINE | Alu | Name=AluJr |
| ADediting_773986 | chr19_49703726_+ | SINE | Alu | Name=AluJr |
| ADediting_773987 | chr19_49703733_+ | SINE | Alu | Name=AluJr |
| ADediting_773988 | chr19_49703762_+ | SINE | Alu | Name=AluJr |
| ADediting_773989 | chr19_49703778_+ | SINE | Alu | Name=AluJr |
| ADediting_773990 | chr19_49703799_+ | SINE | Alu | Name=AluJr |
| ADediting_773991 | chr19_49703805_+ | SINE | Alu | Name=AluJr |
| ADediting_773992 | chr19_49703816_+ | SINE | Alu | Name=AluJr |
| ADediting_773993 | chr19_49703842_+ | SINE | Alu | Name=AluJr |
| ADediting_773994 | chr19_49703853_+ | SINE | Alu | Name=AluJr |
| ADediting_773995 | chr19_49703861_+ | SINE | Alu | Name=AluJr |
| ADediting_773996 | chr19_49703868_+ | SINE | Alu | Name=AluJr |
| ADediting_773997 | chr19_49703880_+ | SINE | Alu | Name=AluJr |
| ADediting_773998 | chr19_49703885_+ | SINE | Alu | Name=AluJr |
| ADediting_773999 | chr19_49703902_+ | SINE | Alu | Name=AluJr |
| ADediting_774000 | chr19_49704202_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774001 | chr19_49704228_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774002 | chr19_49704241_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774003 | chr19_49704272_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774004 | chr19_49704289_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774005 | chr19_49704294_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774006 | chr19_49704311_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774007 | chr19_49704313_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774008 | chr19_49704352_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774009 | chr19_49704355_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774010 | chr19_49704361_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774011 | chr19_49704381_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774012 | chr19_49704393_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774013 | chr19_49704396_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774014 | chr19_49704406_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774015 | chr19_49704415_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774016 | chr19_49704423_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774017 | chr19_49704432_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774018 | chr19_49704433_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774019 | chr19_49704445_+ | SINE | Alu | Name=AluSq2 |
| ADediting_774020 | chr19_49711155_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774021 | chr19_49711158_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774022 | chr19_49711168_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774023 | chr19_49711174_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774024 | chr19_49711187_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774025 | chr19_49711194_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774026 | chr19_49711223_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774027 | chr19_49711230_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774028 | chr19_49711233_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774029 | chr19_49711235_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774030 | chr19_49711239_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774031 | chr19_49711304_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774032 | chr19_49711316_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774033 | chr19_49711341_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774034 | chr19_49711369_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774035 | chr19_49711381_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774036 | chr19_49711383_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774037 | chr19_49712069_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774038 | chr19_49712212_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774039 | chr19_49712216_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774040 | chr19_49712232_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774041 | chr19_49712251_+ | SINE | Alu | Name=AluSx1 |
| ADediting_774042 | chr19_49712301_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1557527 | chr19_49693695_+ | SINE | Alu | Name=AluJo |
| ADediting_1557528 | chr19_49697872_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1557529 | chr19_49698564_+ | SINE | Alu | Name=AluSx |
| ADediting_1557530 | chr19_49698614_+ | SINE | Alu | Name=AluSx |
| ADediting_1557531 | chr19_49712253_+ | SINE | Alu | Name=AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for CPT1C |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CPT1C |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for CPT1C |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for CPT1C |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for CPT1C |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CPT1C |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_773938 | chr19_49692915_+ | 0.941775753495311 | -0.00416509657939342 | 0.17890539879879 | -0.0765387922420174 | 3.53624795325441e-10 | 0.346591720556584 |
| CER | ADediting_773957 | chr19_49697702_+ | 0.012403593158866 | 0.203719348940843 | 3.50311653084478e-05 | 0.331059926491407 | 0.159098453756371 | 0.115552858397844 |
| CER | ADediting_773958 | chr19_49702384_+ | 0.0275175092832336 | 0.179997039934996 | 3.905883202426e-05 | 0.329169316945984 | 0.0136178849589179 | 0.201065394300918 |
| CER | ADediting_773962 | chr19_49702432_+ | 0.00694038478985312 | 0.219569050117614 | 8.83152732329646e-06 | 0.353990128073493 | 0.0126003943300798 | 0.203274187896841 |
| CER | ADediting_773963 | chr19_49702440_+ | 0.00263071161459758 | 0.243912996935459 | 6.71384479450767e-05 | 0.319569124382413 | 0.00892708898121123 | 0.212828897410269 |
| CER | ADediting_773966 | chr19_49702453_+ | 0.0463483607974956 | 0.16293735214392 | 0.00599389167648647 | 0.223408308211171 | 0.000133599967206059 | 0.306886623000102 |
| TCX | ADediting_773973 | chr19_49702505_+ | 0.542710522067254 | -0.0500895300328375 | 0.0458936698370245 | -0.163273259062981 | 8.14054385844642e-05 | 0.316074721297672 |
| CER | ADediting_773978 | chr19_49702566_+ | 0.0915830670041036 | 0.138245828425771 | 0.000158130272881296 | 0.303690296516415 | 0.0171742903066194 | 0.194334466163561 |
| CER | ADediting_773984 | chr19_49703664_+ | 5.63840298778608e-05 | 0.322698353158756 | 1.36971826871559e-05 | 0.346880181651985 | 0.0991319581617651 | 0.135158620184644 |
| CER | ADediting_773985 | chr19_49703683_+ | 6.02753426697562e-05 | 0.32150612696531 | 4.44863788680714e-08 | 0.428620811666761 | 0.0408273032424948 | 0.167217530347853 |
| CER | ADediting_773991 | chr19_49703805_+ | 0.00338353675983767 | 0.237825619564893 | 3.36044714431872e-05 | 0.331778973650768 | 0.000676491060539633 | 0.274468481759053 |
| CER | ADediting_773994 | chr19_49703853_+ | 0.00747057218207757 | 0.217617829255235 | 2.41359873846593e-08 | 0.436181004416499 | 0.00274733874912576 | 0.242874278430634 |
| CER | ADediting_773997 | chr19_49703880_+ | 0.00125421245177025 | 0.261024135708631 | 9.80906138205422e-08 | 0.418562210548968 | 3.31214178872119e-05 | 0.332028946522875 |
| CER | ADediting_773998 | chr19_49703885_+ | 0.00655845946004678 | 0.221058520318719 | 8.82945601637033e-06 | 0.353993882690749 | 0.00251762734230108 | 0.244960740405838 |
| CER | ADediting_774002 | chr19_49704241_+ | 0.0262095869717077 | 0.181522512453156 | 2.20925700048236e-06 | 0.375381897301867 | 0.000476892241675317 | 0.281790475354509 |
| CER | ADediting_774006 | chr19_49704311_+ | 0.0158708745222741 | 0.196646712600706 | 2.16510790617313e-05 | 0.339273897134385 | 0.0735115377481195 | 0.146559580869779 |
| CER | ADediting_774008 | chr19_49704352_+ | 0.000661611945815906 | 0.274940264339737 | 3.45760458003292e-05 | 0.331286266940416 | 0.0907264135325742 | 0.138608797362802 |
| CER | ADediting_774010 | chr19_49704361_+ | 0.000172853226507984 | 0.301987354736582 | 1.2524249574841e-05 | 0.348344559951797 | 0.0414956097784718 | 0.166674541920416 |
| CER | ADediting_774020 | chr19_49711155_+ | 0.0297435585337942 | 0.177537519929475 | 1.9164648680342e-06 | 0.377492664109414 | 0.0049443214302314 | 0.228357724878864 |
| CER | ADediting_774023 | chr19_49711174_+ | 0.0478715903661266 | 0.161831698603942 | 1.22364848679416e-06 | 0.384058152736679 | 0.00304216015382762 | 0.240416278215669 |
| CER | ADediting_774026 | chr19_49711223_+ | 0.445711167449894 | 0.0627281696019181 | 0.00215823637668227 | 0.248599644198199 | 0.000152916165127607 | 0.304328990180423 |
| CER | ADediting_774028 | chr19_49711233_+ | 0.358237272273873 | 0.0755385888882431 | 2.50444224351375e-05 | 0.336812992548239 | 0.025736678312715 | 0.18209013448123 |
| CER | ADediting_774030 | chr19_49711239_+ | 0.0363079571781939 | 0.171099205602984 | 8.31742231164915e-07 | 0.389596040375855 | 0.00152121584040138 | 0.25667480102377 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 6.16344217219449e-10 | 0.342077990703484 | 4.13781426361211e-28 | 0.570039499918126 | 0.0111129303733936 | 0.144041833267102 |
| AC | 5.75172078730557e-33 | 0.662511679668462 | 3.20430577200717e-40 | 0.713681757826522 | 0.0115330424494182 | 0.159540700725189 |
| PCC | 2.82207629981955e-35 | 0.746489905022633 | 5.5524906133798e-38 | 0.76510972185447 | 0.587806942709897 | 0.0394627210766351 |
| CER | 0.4113388294029 | 0.0675669764230229 | 6.19345870333036e-07 | 0.393758564087092 | 0.00286053143766282 | 0.241903597577948 |
| TCX | 0.000792759589218589 | 0.271079512405133 | 4.48770965931356e-13 | 0.546864008508334 | 0.0646703272539985 | -0.151246454977525 |
| FP | 2.69218895986483e-28 | 0.707161327768589 | 9.58774528095847e-33 | 0.744815494564629 | 0.000539764488461955 | 0.256799380524411 |
| IFG | 1.33799850289255e-06 | 0.803275997383028 | 1.33829452672647e-07 | 0.84176135685625 | 0.583264851717955 | 0.115258425127599 |
| PG | 0.000642522343780466 | 0.248003894545077 | 1.9338011555517e-10 | 0.445176035649506 | 0.296139341391474 | -0.0770099815250927 |
| STG | 7.35354105780355e-26 | 0.861533508801116 | 1.43055891967557e-19 | 0.796073745002071 | 0.662223961294637 | 0.0483603876089903 |
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Relation with AD stages for CPT1C |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_773958 | chr19_49702384_+ | 0.00147949762966203 | 0.302199970849243 |
| CER | ADediting_773963 | chr19_49702440_+ | 2.31323896218041e-07 | 0.473238466900602 |
| CER | ADediting_773964 | chr19_49702441_+ | 9.36139794122844e-06 | 0.412101178426908 |
| CER | ADediting_773973 | chr19_49702505_+ | 0.000109516648493558 | 0.363648048754889 |
| CER | ADediting_773974 | chr19_49702509_+ | 0.000360791351679051 | 0.337075536747535 |
| CER | ADediting_773975 | chr19_49702516_+ | 0.00018048305694447 | 0.352797447328703 |
| CER | ADediting_773979 | chr19_49702570_+ | 0.000836064154089234 | 0.316810970644749 |
| CER | ADediting_773988 | chr19_49703762_+ | 0.000237868942092727 | 0.346629385646238 |
| CER | ADediting_773991 | chr19_49703805_+ | 0.000133079451773906 | 0.359461476871562 |
| CER | ADediting_773998 | chr19_49703885_+ | 0.00120358000308879 | 0.307569534199683 |
| CER | ADediting_774002 | chr19_49704241_+ | 9.10215412545246e-05 | 0.367569587783605 |
| CER | ADediting_774009 | chr19_49704355_+ | 0.000313186946129474 | 0.340355059035272 |
| CER | ADediting_774012 | chr19_49704393_+ | 3.03102376344725e-06 | 0.432022548608188 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 3.51910990637904e-05 | 0.386960564083606 |
Top |
RelatedDrugs for CPT1C |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CPT1C |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| CPT1C | C0025202 | melanoma | 1 | CTD_human |
| CPT1C | C0031117 | Peripheral Neuropathy | 1 | CTD_human |
| CPT1C | C4225387 | SPASTIC PARAPLEGIA 73, AUTOSOMAL DOMINANT | 1 | CTD_human;ORPHANET;UNIPROT |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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