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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for NAA30 |
 Gene summary |
| Gene information | Gene symbol | NAA30 | Gene ID | 122830 |
| Gene name | N-alpha-acetyltransferase 30, NatC catalytic subunit | |
| Synonyms | C14orf35|MAK3|Mak3p|NAT12|NAT12P | |
| Cytomap | 14q22.3 | |
| Type of gene | protein-coding | |
| Description | N-alpha-acetyltransferase 30N-acetyltransferase 12 (GCN5-related, putative)N-acetyltransferase MAK3 homolognatC catalytic subunitputative N-acetyltransferase | |
| Modification date | 20200313 | |
| UniProtAcc | Q147X3, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| NAA30 | GO:0017196 | N-terminal peptidyl-methionine acetylation | 19398576 |
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RNA A-to-I events for NAA30 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_437284(57397669, +), ADediting_437285(57397672, +), ADediting_437286(57397749, +), ADediting_437287(57397805, +), ADediting_437288(57397818, +), ADediting_437289(57397831, +), ADediting_437290(57397837, +), ADediting_437291(57397900, +), ADediting_437292(57397905, +), ADediting_437293(57406941, +), ADediting_437294(57407005, +), ADediting_437295(57413683, +), ADediting_437296(57413755, +), ADediting_437297(57413756, +), ADediting_437298(57414136, +), ADediting_437299(57414150, +), ADediting_437300(57414156, +), ADediting_437301(57414213, +), ADediting_437302(57414217, +), ADediting_1537093(57398664, +), ADediting_1537094(57414164, +), ADediting_1619469(57398732, +), |
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RNA editing positional annotations for NAA30 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_437284 | chr14_57397669_+ | intronic |
| ADediting_437285 | chr14_57397672_+ | intronic |
| ADediting_437286 | chr14_57397749_+ | intronic |
| ADediting_437287 | chr14_57397805_+ | intronic |
| ADediting_437288 | chr14_57397818_+ | intronic |
| ADediting_437289 | chr14_57397831_+ | intronic |
| ADediting_437290 | chr14_57397837_+ | intronic |
| ADediting_437291 | chr14_57397900_+ | intronic |
| ADediting_437292 | chr14_57397905_+ | intronic |
| ADediting_437293 | chr14_57406941_+ | intronic |
| ADediting_437294 | chr14_57407005_+ | intronic |
| ADediting_437295 | chr14_57413683_+ | UTR3 |
| ADediting_437296 | chr14_57413755_+ | UTR3 |
| ADediting_437297 | chr14_57413756_+ | UTR3 |
| ADediting_437298 | chr14_57414136_+ | UTR3 |
| ADediting_437299 | chr14_57414150_+ | UTR3 |
| ADediting_437300 | chr14_57414156_+ | UTR3 |
| ADediting_437301 | chr14_57414213_+ | UTR3 |
| ADediting_437302 | chr14_57414217_+ | UTR3 |
| ADediting_1537093 | chr14_57398664_+ | intronic |
| ADediting_1537094 | chr14_57414164_+ | UTR3 |
| ADediting_1619469 | chr14_57398732_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_437284 | chr14_57397669_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437285 | chr14_57397672_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437286 | chr14_57397749_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437287 | chr14_57397805_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437288 | chr14_57397818_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437289 | chr14_57397831_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437290 | chr14_57397837_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437291 | chr14_57397900_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437292 | chr14_57397905_+ | SINE | Alu | Name=AluSg7 |
| ADediting_437293 | chr14_57406941_+ | SINE | Alu | Name=AluJb |
| ADediting_437294 | chr14_57407005_+ | SINE | Alu | Name=AluJb |
| ADediting_437295 | chr14_57413683_+ | SINE | Alu | Name=AluSz |
| ADediting_437296 | chr14_57413755_+ | SINE | Alu | Name=AluSz |
| ADediting_437297 | chr14_57413756_+ | SINE | Alu | Name=AluSz |
| ADediting_437298 | chr14_57414136_+ | SINE | Alu | Name=FLAM_C |
| ADediting_437299 | chr14_57414150_+ | SINE | Alu | Name=FLAM_C |
| ADediting_437300 | chr14_57414156_+ | SINE | Alu | Name=FLAM_C |
| ADediting_437301 | chr14_57414213_+ | SINE | Alu | Name=FLAM_C |
| ADediting_437302 | chr14_57414217_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1537093 | chr14_57398664_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1537094 | chr14_57414164_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1619469 | chr14_57398732_+ | SINE | Alu | Name=AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for NAA30 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NAA30 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for NAA30 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for NAA30 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-340-3p | chr14 | 57413677 | 57413683 | 7mer-m8 | 57413665 | 57413684 | 152 | -19.72 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6827-3p | chr14 | 57413677 | 57413683 | 7mer-m8 | 57413663 | 57413684 | 144 | -15.43 |
| ADediting_437296 | chr14_57413755_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-3192-5p | chr14 | 57413748 | 57413755 | 8mer-1a | 57413733 | 57413755 | 158 | -30.9 |
| ADediting_437296 | chr14_57413755_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-326 | chr14 | 57413750 | 57413756 | 7mer-m8 | 57413738 | 57413757 | 140 | -15.12 |
| ADediting_437296 | chr14_57413755_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-330-5p | chr14 | 57413750 | 57413756 | 7mer-m8 | 57413736 | 57413757 | 140 | -21.22 |
| ADediting_437296 | chr14_57413755_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4314 | chr14 | 57413749 | 57413755 | 7mer-m8 | 57413739 | 57413756 | 140 | -21.17 |
| ADediting_437296 | chr14_57413755_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-514a-5p | chr14 | 57413751 | 57413757 | 7mer-m8 | 57413735 | 57413758 | 146 | -20.07 |
| ADediting_437297 | chr14_57413756_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-3189-3p | chr14 | 57413750 | 57413756 | 7mer-m8 | 57413735 | 57413757 | 149 | -25.05 |
| ADediting_437297 | chr14_57413756_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6813-3p | chr14 | 57413751 | 57413757 | 7mer-m8 | 57413738 | 57413758 | 140 | -12.55 |
| ADediting_437299 | chr14_57414150_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4634 | chr14 | 57414147 | 57414153 | 7mer-m8 | 57414136 | 57414154 | 150 | -21.94 |
| ADediting_437301 | chr14_57414213_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4659a-5p | chr14 | 57414209 | 57414216 | 8mer-1a | 57414195 | 57414216 | 141 | -11.99 |
| ADediting_437301 | chr14_57414213_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4659b-5p | chr14 | 57414209 | 57414216 | 8mer-1a | 57414198 | 57414216 | 141 | -12.77 |
| ADediting_437301 | chr14_57414213_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4776-3p | chr14 | 57414210 | 57414216 | 7mer-m8 | 57414196 | 57414217 | 158 | -24.18 |
| ADediting_437302 | chr14_57414217_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-1910-5p | chr14 | 57414215 | 57414221 | 7mer-m8 | 57414203 | 57414222 | 148 | -19.8 |
| ADediting_437302 | chr14_57414217_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6838-3p | chr14 | 57414214 | 57414220 | 7mer-m8 | 57414203 | 57414221 | 159 | -22.44 |
| ADediting_437302 | chr14_57414217_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6893-3p | chr14 | 57414212 | 57414218 | 7mer-1a | 57414197 | 57414218 | 140 | -17.41 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1537094 | chr14_57414164_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6506-5p | chr14 | 57414158 | 57414164 | 7mer-m8 | 57414143 | 57414165 | 141 | -14.57 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-10a-5p | chr14 | 57413680 | 57413686 | 7mer-m8 | 57413664 | 57413687 | 144 | -13.09 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-10b-5p | chr14 | 57413680 | 57413686 | 7mer-m8 | 57413665 | 57413687 | 140 | -13.22 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-339-5p | chr14 | 57413679 | 57413685 | 7mer-m8 | 57413661 | 57413686 | 146 | -18.82 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4421 | chr14 | 57413678 | 57413684 | 7mer-m8 | 57413663 | 57413685 | 153 | -17.17 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-5699-3p | chr14 | 57413678 | 57413684 | 7mer-m8 | 57413663 | 57413685 | 144 | -17.29 |
| ADediting_437295 | chr14_57413683_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6732-3p | chr14 | 57413681 | 57413687 | 7mer-m8 | 57413666 | 57413688 | 152 | -17.77 |
| ADediting_437296 | chr14_57413755_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-887-5p | chr14 | 57413748 | 57413755 | 8mer-1a | 57413735 | 57413755 | 147 | -13.82 |
| ADediting_437298 | chr14_57414136_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-3126-3p | chr14 | 57414132 | 57414138 | 7mer-m8 | 57414118 | 57414139 | 142 | -16.71 |
| ADediting_437298 | chr14_57414136_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-3176 | chr14 | 57414130 | 57414137 | 8mer-1a | 57414119 | 57414137 | 142 | -15.98 |
| ADediting_437298 | chr14_57414136_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-3922-3p | chr14 | 57414130 | 57414137 | 8mer-1a | 57414116 | 57414137 | 153 | -21.57 |
| ADediting_437299 | chr14_57414150_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-6807-5p | chr14 | 57414143 | 57414149 | 7mer-m8 | 57414128 | 57414150 | 144 | -19.38 |
| ADediting_437301 | chr14_57414213_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-31-3p | chr14 | 57414208 | 57414215 | 8mer-1a | 57414194 | 57414215 | 140 | -13.2 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-381-3p | chr14 | 57412130 | 57412136 | 7mer-m8 | 57412116 | 57412137 | 142 | -12.34 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-381-3p | chr14 | 57412130 | 57412136 | 7mer-m8 | 57412116 | 57412137 | 142 | -12.34 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-641 | chr14 | 57415348 | 57415354 | 7mer-m8 | 57415332 | 57415355 | 153 | -14.47 |
| ADediting_496066 | chr15_66496985_- | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-4512 | chr14 | 57411033 | 57411039 | 7mer-m8 | 57411019 | 57411040 | 140 | -18.55 |
| ADediting_496066 | chr15_66496985_- | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4512 | chr14 | 57411033 | 57411039 | 7mer-m8 | 57411019 | 57411040 | 140 | -18.55 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-4775 | chr14 | 57412403 | 57412409 | 7mer-m8 | 57412389 | 57412410 | 152 | -8.31 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-4775 | chr14 | 57412440 | 57412447 | 8mer-1a | 57412426 | 57412447 | 146 | -9.47 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4775 | chr14 | 57412403 | 57412409 | 7mer-m8 | 57412389 | 57412410 | 152 | -8.31 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4775 | chr14 | 57412440 | 57412447 | 8mer-1a | 57412426 | 57412447 | 146 | -9.47 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-5585-3p | chr14 | 57415659 | 57415665 | 7mer-m8 | 57415645 | 57415666 | 142 | -17.11 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-5585-3p | chr14 | 57411815 | 57411821 | 7mer-m8 | 57411803 | 57411822 | 141 | -16.19 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-5585-3p | chr14 | 57411815 | 57411821 | 7mer-m8 | 57411803 | 57411822 | 141 | -16.19 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-5688 | chr14 | 57412309 | 57412315 | 7mer-m8 | 57412295 | 57412316 | 153 | -9.4 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-5688 | chr14 | 57412309 | 57412315 | 7mer-m8 | 57412295 | 57412316 | 153 | -9.4 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-5688 | chr14 | 57413356 | 57413362 | 7mer-m8 | 57413342 | 57413363 | 147 | -9.4 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000139977.14 | ENST00000554703.1 | NAA30-202 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000139977.14 | ENST00000555166.5 | NAA30-203 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000139977.14 | ENST00000554703.1 | NAA30-202 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000139977.14 | ENST00000555166.5 | NAA30-203 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4477b | chr14 | 57409853 | 57409860 | 8mer-1a | 57409838 | 57409860 | 145 | -12.13 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-381-3p | chr14 | 57410638 | 57410644 | 7mer-m8 | 57410624 | 57410645 | 150 | -9.59 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-381-3p | chr14 | 57410638 | 57410644 | 7mer-m8 | 57410624 | 57410645 | 150 | -9.59 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-381-3p | chr14 | 57413661 | 57413667 | 7mer-m8 | 57413647 | 57413668 | 142 | -11.23 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-381-3p | chr14 | 57410638 | 57410644 | 7mer-m8 | 57410624 | 57410645 | 150 | -9.59 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-381-3p | chr14 | 57410638 | 57410644 | 7mer-m8 | 57410624 | 57410645 | 150 | -9.59 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-381-3p | chr14 | 57413661 | 57413667 | 7mer-m8 | 57413647 | 57413668 | 142 | -11.23 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-641 | chr14 | 57410044 | 57410051 | 8mer-1a | 57410028 | 57410051 | 145 | -14.82 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000139977.14 | ENST00000555166.5 | NAA30-203 | hsa-miR-641 | chr14 | 57410044 | 57410051 | 8mer-1a | 57410028 | 57410051 | 145 | -14.82 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-641 | chr14 | 57410044 | 57410051 | 8mer-1a | 57410028 | 57410051 | 145 | -14.82 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-556-3p | chr14 | 57415505 | 57415511 | 7mer-1a | 57415490 | 57415511 | 140 | -16.22 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-641 | chr14 | 57410044 | 57410051 | 8mer-1a | 57410028 | 57410051 | 145 | -14.82 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000139977.14 | ENST00000555166.5 | NAA30-203 | hsa-miR-641 | chr14 | 57410044 | 57410051 | 8mer-1a | 57410028 | 57410051 | 145 | -14.82 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-641 | chr14 | 57410044 | 57410051 | 8mer-1a | 57410028 | 57410051 | 145 | -14.82 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000139977.14 | ENST00000298406.6 | NAA30-201 | hsa-miR-4775 | chr14 | 57410461 | 57410467 | 7mer-m8 | 57410449 | 57410468 | 145 | -0.91 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000139977.14 | ENST00000556492.6 | NAA30-204 | hsa-miR-4775 | chr14 | 57410461 | 57410467 | 7mer-m8 | 57410449 | 57410468 | 145 | -0.91 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for NAA30 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000556492.6 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_437295 | ENST00000556492.6 | chr14_57413683_+ | 5377 | -2169.10 | -2169.20 | -2184.50 |
| ADediting_437296 | ENST00000556492.6 | chr14_57413755_+ | 5449 | -2169.30 | -2169.20 | -2184.50 |
| ADediting_437297 | ENST00000556492.6 | chr14_57413756_+ | 5450 | -2168.80 | -2169.20 | -2184.50 |
| ADediting_437298 | ENST00000556492.6 | chr14_57414136_+ | 5830 | -2173.10 | -2169.20 | -2184.50 |
| ADediting_437299 | ENST00000556492.6 | chr14_57414150_+ | 5844 | -2168.80 | -2169.20 | -2184.50 |
| ADediting_437300 | ENST00000556492.6 | chr14_57414156_+ | 5850 | -2174.60 | -2169.20 | -2184.50 |
| ADediting_1537094 | ENST00000556492.6 | chr14_57414164_+ | 5858 | -2168.40 | -2169.20 | -2184.50 |
| ADediting_437301 | ENST00000556492.6 | chr14_57414213_+ | 5907 | -2175.30 | -2169.20 | -2184.50 |
| ADediting_437302 | ENST00000556492.6 | chr14_57414217_+ | 5911 | -2171.10 | -2169.20 | -2184.50 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NAA30 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_437300 | chr14_57414156_+ | 6.28229437573696e-11 | 0.501489790745971 | 1.96172276426987e-10 | 0.490011561178472 | 0.390858430312709 | 0.070563349474645 |
| TCX | ADediting_437300 | chr14_57414156_+ | 0.00122490238664963 | 0.261552028678406 | 0.000149314019872977 | 0.304782190199205 | 0.677376921918754 | 0.0342464686772956 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.159628088366e-67 | 0.789361060413002 | 2.10197334280169e-43 | 0.679948695837118 | 0.928583946853395 | -0.005111062958387 |
| AC | 1.97609788124971e-106 | 0.925316513052409 | 2.42484282902409e-73 | 0.856943482333871 | 3.76352903106026e-09 | 0.361888090846207 |
| PCC | 5.23859659871273e-54 | 0.848008840060255 | 1.90382057222394e-55 | 0.853687168160435 | 0.0527979625193025 | 0.140352196032934 |
| CER | 2.80364602516146e-41 | 0.840782386207523 | 3.32800438745326e-34 | 0.79687262092169 | 0.00237973801158674 | 0.246297565824436 |
| TCX | 2.72570393277822e-56 | 0.903392408589075 | 1.03962364261664e-28 | 0.753174898994006 | 0.817480044669604 | -0.0190009550141534 |
| FP | 2.75691310199099e-11 | 0.472501520726787 | 1.88365142129278e-25 | 0.67947203812733 | 0.487875697272874 | -0.0523274003206409 |
| IFG | 7.6785610393897e-07 | 0.813417598849038 | 1.58215544564415e-06 | 0.800096274238186 | 0.663276911736673 | -0.0915840316643104 |
| PG | 1.64721866827184e-54 | 0.855599263779394 | 3.73765425036066e-34 | 0.744770716184989 | 0.215605976163037 | -0.0912218579056958 |
| STG | 7.23295086837171e-11 | 0.637132564082563 | 1.00579282523335e-16 | 0.755484612658726 | 0.101478254012394 | -0.179925308455435 |
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Relation with AD stages for NAA30 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 5.54535244625675e-06 | 0.421509161902399 |
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RelatedDrugs for NAA30 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NAA30 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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