|
||||||
|
![]() | |
![]() | |
![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
![]() | |
![]() | |
![]() | The effects of the RNA editing to the stability of the RNA structures |
![]() | |
![]() | |
![]() | |
![]() |
Gene summary for ANKRD9 |
Gene summary |
| Gene information | Gene symbol | ANKRD9 | Gene ID | 122416 |
| Gene name | ankyrin repeat domain 9 | |
| Synonyms | - | |
| Cytomap | 14q32.31 | |
| Type of gene | protein-coding | |
| Description | ankyrin repeat domain-containing protein 9 | |
| Modification date | 20200313 | |
| UniProtAcc | Q96BM1, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for ANKRD9 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
![]() |
RNA editing frequencies across three data sets. |
![]() |
The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
![]() |
RNA A-to-I editing events in AD. |
| ADediting_413436(102502955, -), ADediting_413437(102502956, -), ADediting_413438(102502958, -), ADediting_413439(102502970, -), ADediting_413440(102502971, -), ADediting_413441(102502980, -), ADediting_413442(102503008, -), ADediting_413443(102503017, -), ADediting_413444(102503021, -), ADediting_413445(102503047, -), ADediting_413446(102503089, -), ADediting_413447(102503091, -), ADediting_413448(102503101, -), ADediting_413449(102503161, -), ADediting_413450(102503456, -), ADediting_413451(102503532, -), ADediting_413452(102503533, -), ADediting_413453(102503555, -), ADediting_1536070(102503554, -), |
Top |
RNA editing positional annotations for ANKRD9 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_413436 | chr14_102502955_- | UTR3 |
| ADediting_413437 | chr14_102502956_- | UTR3 |
| ADediting_413438 | chr14_102502958_- | UTR3 |
| ADediting_413439 | chr14_102502970_- | UTR3 |
| ADediting_413440 | chr14_102502971_- | UTR3 |
| ADediting_413441 | chr14_102502980_- | UTR3 |
| ADediting_413442 | chr14_102503008_- | UTR3 |
| ADediting_413443 | chr14_102503017_- | UTR3 |
| ADediting_413444 | chr14_102503021_- | UTR3 |
| ADediting_413445 | chr14_102503047_- | UTR3 |
| ADediting_413446 | chr14_102503089_- | UTR3 |
| ADediting_413447 | chr14_102503091_- | UTR3 |
| ADediting_413448 | chr14_102503101_- | UTR3 |
| ADediting_413449 | chr14_102503161_- | UTR3 |
| ADediting_413450 | chr14_102503456_- | UTR3 |
| ADediting_413451 | chr14_102503532_- | UTR3 |
| ADediting_413452 | chr14_102503533_- | UTR3 |
| ADediting_413453 | chr14_102503555_- | UTR3 |
| ADediting_1536070 | chr14_102503554_- | UTR3 |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_413436 | chr14_102502955_- | SINE | Alu | Name=AluSg |
| ADediting_413437 | chr14_102502956_- | SINE | Alu | Name=AluSg |
| ADediting_413438 | chr14_102502958_- | SINE | Alu | Name=AluSg |
| ADediting_413439 | chr14_102502970_- | SINE | Alu | Name=AluSg |
| ADediting_413440 | chr14_102502971_- | SINE | Alu | Name=AluSg |
| ADediting_413441 | chr14_102502980_- | SINE | Alu | Name=AluSg |
| ADediting_413442 | chr14_102503008_- | SINE | Alu | Name=AluSg |
| ADediting_413443 | chr14_102503017_- | SINE | Alu | Name=AluSg |
| ADediting_413444 | chr14_102503021_- | SINE | Alu | Name=AluSg |
| ADediting_413445 | chr14_102503047_- | SINE | Alu | Name=AluSg |
| ADediting_413446 | chr14_102503089_- | SINE | Alu | Name=AluSg |
| ADediting_413447 | chr14_102503091_- | SINE | Alu | Name=AluSg |
| ADediting_413448 | chr14_102503101_- | SINE | Alu | Name=AluSg |
| ADediting_413449 | chr14_102503161_- | SINE | Alu | Name=AluSg |
| ADediting_413450 | chr14_102503456_- | SINE | Alu | Name=AluSx1 |
| ADediting_413451 | chr14_102503532_- | SINE | Alu | Name=AluSx1 |
| ADediting_413452 | chr14_102503533_- | SINE | Alu | Name=AluSx1 |
| ADediting_413453 | chr14_102503555_- | SINE | Alu | Name=AluSx1 |
| ADediting_1536070 | chr14_102503554_- | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for ANKRD9 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ANKRD9 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
![]() | |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
![]() |
![]() |
![]() |
![]() |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ANKRD9 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for ANKRD9 |
RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
![]() |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_413436 | chr14_102502955_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-1228-3p | chr14 | 102502949 | 102502956 | 8mer-1a | 102502949 | 102502966 | 155 | -24.89 |
| ADediting_413439 | chr14_102502970_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-3189-3p | chr14 | 102502969 | 102502975 | 7mer-m8 | 102502968 | 102502990 | 153 | -24.98 |
| ADediting_413439 | chr14_102502970_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6813-3p | chr14 | 102502968 | 102502974 | 7mer-m8 | 102502967 | 102502987 | 140 | -10.68 |
| ADediting_413440 | chr14_102502971_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-326 | chr14 | 102502969 | 102502975 | 7mer-m8 | 102502968 | 102502987 | 140 | -13.25 |
| ADediting_413440 | chr14_102502971_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-330-5p | chr14 | 102502969 | 102502975 | 7mer-m8 | 102502968 | 102502991 | 143 | -20.01 |
| ADediting_413440 | chr14_102502971_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4314 | chr14 | 102502970 | 102502976 | 7mer-m8 | 102502969 | 102502987 | 143 | -20.84 |
| ADediting_413440 | chr14_102502971_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-514a-5p | chr14 | 102502968 | 102502974 | 7mer-m8 | 102502967 | 102502990 | 150 | -18.62 |
| ADediting_413442 | chr14_102503008_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-28-5p | chr14 | 102503003 | 102503009 | 7mer-m8 | 102503002 | 102503023 | 148 | -17.62 |
| ADediting_413442 | chr14_102503008_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-708-5p | chr14 | 102503003 | 102503009 | 7mer-m8 | 102503002 | 102503024 | 157 | -23.32 |
| ADediting_413443 | chr14_102503017_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4485-5p | chr14 | 102503016 | 102503022 | 7mer-m8 | 102503015 | 102503030 | 154 | -22.35 |
| ADediting_413448 | chr14_102503101_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4691-3p | chr14 | 102503097 | 102503103 | 7mer-m8 | 102503096 | 102503117 | 146 | -25.33 |
| ADediting_413449 | chr14_102503161_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4537 | chr14 | 102503156 | 102503163 | 8mer-1a | 102503156 | 102503179 | 150 | -21.37 |
| ADediting_413450 | chr14_102503456_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4482-3p | chr14 | 102503453 | 102503460 | 8mer-1a | 102503453 | 102503473 | 165 | -17.16 |
| ADediting_413451 | chr14_102503532_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-3176 | chr14 | 102503532 | 102503538 | 7mer-m8 | 102503531 | 102503549 | 140 | -15.24 |
| ADediting_413451 | chr14_102503532_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-3620-3p | chr14 | 102503528 | 102503534 | 7mer-m8 | 102503527 | 102503549 | 156 | -24.24 |
| ADediting_413451 | chr14_102503532_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-3922-3p | chr14 | 102503532 | 102503538 | 7mer-m8 | 102503531 | 102503552 | 141 | -19.73 |
| ADediting_413453 | chr14_102503555_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-513a-5p | chr14 | 102503554 | 102503560 | 7mer-m8 | 102503553 | 102503570 | 144 | -17.77 |
| ADediting_413453 | chr14_102503555_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-638 | chr14 | 102503549 | 102503555 | 7mer-1a | 102503549 | 102503573 | 151 | -32.52 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1536070 | chr14_102503554_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-10399-5p | chr14 | 102503553 | 102503559 | 7mer-m8 | 102503552 | 102503573 | 148 | -11.2 |
| ADediting_1536070 | chr14_102503554_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-5089-5p | chr14 | 102503549 | 102503555 | 7mer-m8 | 102503548 | 102503570 | 148 | -13.62 |
| ADediting_1536070 | chr14_102503554_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6504-3p | chr14 | 102503553 | 102503559 | 7mer-m8 | 102503552 | 102503573 | 145 | -14.35 |
| ADediting_413436 | chr14_102502955_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-216b-3p | chr14 | 102502949 | 102502956 | 8mer-1a | 102502949 | 102502974 | 152 | -17.85 |
| ADediting_413436 | chr14_102502955_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6500-3p | chr14 | 102502952 | 102502958 | 7mer-m8 | 102502951 | 102502971 | 140 | -14.14 |
| ADediting_413437 | chr14_102502956_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6500-3p | chr14 | 102502952 | 102502958 | 7mer-m8 | 102502951 | 102502971 | 140 | -14.14 |
| ADediting_413440 | chr14_102502971_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-887-5p | chr14 | 102502970 | 102502977 | 8mer-1a | 102502970 | 102502989 | 143 | -13.53 |
| ADediting_413441 | chr14_102502980_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4478 | chr14 | 102502976 | 102502982 | 7mer-m8 | 102502975 | 102502991 | 150 | -23.72 |
| ADediting_413441 | chr14_102502980_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4649-3p | chr14 | 102502979 | 102502985 | 7mer-m8 | 102502978 | 102502998 | 147 | -14.72 |
| ADediting_413441 | chr14_102502980_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-485-5p | chr14 | 102502975 | 102502981 | 7mer-m8 | 102502974 | 102502996 | 149 | -17.54 |
| ADediting_413441 | chr14_102502980_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6765-5p | chr14 | 102502980 | 102502986 | 7mer-m8 | 102502979 | 102503006 | 154 | -27.66 |
| ADediting_413441 | chr14_102502980_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6884-5p | chr14 | 102502975 | 102502981 | 7mer-m8 | 102502974 | 102502995 | 154 | -23.23 |
| ADediting_413441 | chr14_102502980_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-7160-5p | chr14 | 102502978 | 102502984 | 7mer-m8 | 102502977 | 102502995 | 154 | -22.76 |
| ADediting_413443 | chr14_102503017_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6747-3p | chr14 | 102503015 | 102503021 | 7mer-m8 | 102503014 | 102503033 | 143 | -18.78 |
| ADediting_413444 | chr14_102503021_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-3190-5p | chr14 | 102503020 | 102503026 | 7mer-m8 | 102503019 | 102503038 | 146 | -17.92 |
| ADediting_413444 | chr14_102503021_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-548s | chr14 | 102503021 | 102503027 | 7mer-m8 | 102503020 | 102503041 | 151 | -15.44 |
| ADediting_413446 | chr14_102503089_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6720-3p | chr14 | 102503084 | 102503090 | 7mer-m8 | 102503083 | 102503104 | 148 | -18.72 |
| ADediting_413448 | chr14_102503101_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-5690 | chr14 | 102503097 | 102503103 | 7mer-m8 | 102503096 | 102503116 | 147 | -19.59 |
| ADediting_413449 | chr14_102503161_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4329 | chr14 | 102503160 | 102503166 | 7mer-m8 | 102503159 | 102503177 | 148 | -16.82 |
| ADediting_413452 | chr14_102503533_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6878-3p | chr14 | 102503532 | 102503539 | 8mer-1a | 102503532 | 102503552 | 142 | -14.14 |
| ADediting_413453 | chr14_102503555_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-10399-5p | chr14 | 102503553 | 102503559 | 7mer-m8 | 102503552 | 102503573 | 148 | -11.2 |
| ADediting_413453 | chr14_102503555_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-6504-3p | chr14 | 102503553 | 102503559 | 7mer-m8 | 102503552 | 102503573 | 145 | -14.35 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-589-3p | chr14 | 102503194 | 102503200 | 7mer-m8 | 102503193 | 102503217 | 150 | -16.11 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-589-3p | chr14 | 102503973 | 102503979 | 7mer-m8 | 102503972 | 102503994 | 155 | -24.08 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-641 | chr14 | 102505120 | 102505126 | 7mer-m8 | 102505119 | 102505142 | 143 | -14.17 |
| ADediting_291761 | chr11_93733708_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-1304-3p | chr14 | 102504491 | 102504497 | 7mer-m8 | 102504490 | 102504509 | 143 | -19.7 |
| ADediting_496066 | chr15_66496985_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4512 | chr14 | 102506247 | 102506253 | 7mer-m8 | 102506246 | 102506267 | 148 | -22.59 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-5585-3p | chr14 | 102505604 | 102505610 | 7mer-m8 | 102505603 | 102505624 | 144 | -16.41 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-5581-3p | chr14 | 102505758 | 102505764 | 7mer-m8 | 102505757 | 102505778 | 146 | -22.65 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-589-5p | chr14 | 102506535 | 102506542 | 8mer-1a | 102506535 | 102506557 | 153 | -26.45 |
| ADediting_291761 | chr11_93733708_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-1304-3p | chr14 | 102504088 | 102504095 | 8mer-1a | 102504088 | 102504109 | 150 | -15.04 |
| ADediting_496066 | chr15_66496985_- | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-4512 | chr14 | 102504543 | 102504549 | 7mer-m8 | 102504542 | 102504563 | 152 | -23.8 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-1273h-3p | chr14 | 102505843 | 102505849 | 7mer-m8 | 102505842 | 102505866 | 150 | -23.93 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-5585-3p | chr14 | 102503848 | 102503854 | 7mer-m8 | 102503847 | 102503868 | 140 | -14.67 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000156381.9 | ENST00000286918.9 | ANKRD9-201 | hsa-miR-5585-3p | chr14 | 102503848 | 102503854 | 7mer-m8 | 102503847 | 102503868 | 140 | -14.67 |
Differentially expressed gene-miRNA network |
| Differentially expressed mRNA-miRNA network |
![]() |
Top |
The effects of the RNA editing to the stability of the RNA structures for ANKRD9 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000286918.9 | protein_coding | ![]() | ![]() |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_413436 | ENST00000286918.9 | chr14_102502955_- | 5517 | -3237.30 | -3230.70 | -3244.80 |
| ADediting_413437 | ENST00000286918.9 | chr14_102502956_- | 5516 | -3230.00 | -3230.70 | -3244.80 |
| ADediting_413438 | ENST00000286918.9 | chr14_102502958_- | 5514 | -3230.70 | -3230.70 | -3244.80 |
| ADediting_413439 | ENST00000286918.9 | chr14_102502970_- | 5502 | -3230.40 | -3230.70 | -3244.80 |
| ADediting_413440 | ENST00000286918.9 | chr14_102502971_- | 5501 | -3230.80 | -3230.70 | -3244.80 |
| ADediting_413441 | ENST00000286918.9 | chr14_102502980_- | 5492 | -3234.30 | -3230.70 | -3244.80 |
| ADediting_413442 | ENST00000286918.9 | chr14_102503008_- | 5464 | -3230.70 | -3230.70 | -3244.80 |
| ADediting_413443 | ENST00000286918.9 | chr14_102503017_- | 5455 | -3231.10 | -3230.70 | -3244.80 |
| ADediting_413444 | ENST00000286918.9 | chr14_102503021_- | 5451 | -3230.00 | -3230.70 | -3244.80 |
| ADediting_413445 | ENST00000286918.9 | chr14_102503047_- | 5425 | -3230.40 | -3230.70 | -3244.80 |
| ADediting_413446 | ENST00000286918.9 | chr14_102503089_- | 5383 | -3230.00 | -3230.70 | -3244.80 |
| ADediting_413447 | ENST00000286918.9 | chr14_102503091_- | 5381 | -3230.70 | -3230.70 | -3244.80 |
| ADediting_413448 | ENST00000286918.9 | chr14_102503101_- | 5371 | -3230.40 | -3230.70 | -3244.80 |
| ADediting_413449 | ENST00000286918.9 | chr14_102503161_- | 5311 | -3234.30 | -3230.70 | -3244.80 |
| ADediting_413450 | ENST00000286918.9 | chr14_102503456_- | 5016 | -3233.30 | -3230.70 | -3244.80 |
| ADediting_413451 | ENST00000286918.9 | chr14_102503532_- | 4940 | -3230.30 | -3230.70 | -3244.80 |
| ADediting_413452 | ENST00000286918.9 | chr14_102503533_- | 4939 | -3234.10 | -3230.70 | -3244.80 |
| ADediting_1536070 | ENST00000286918.9 | chr14_102503554_- | 4918 | -3227.70 | -3230.70 | -3244.80 |
| ADediting_413453 | ENST00000286918.9 | chr14_102503555_- | 4917 | -3230.80 | -3230.70 | -3244.80 |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for ANKRD9 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_413438 | chr14_102502958_- | 0.0066372766240838 | 0.220744934498247 | 1.12055181346038e-07 | 0.416836318672413 | 0.194968120324655 | 0.106409156283027 |
| CER | ADediting_413441 | chr14_102502980_- | 0.00351871753482749 | 0.236864500773893 | 2.64425132237034e-08 | 0.435064229306165 | 0.00145052481820379 | 0.257753946842281 |
| TCX | ADediting_413441 | chr14_102502980_- | 0.0188856932953049 | 0.191519536466017 | 0.000149484741267302 | 0.304760482239713 | 0.92520536425158 | -0.00772972762142501 |
| CER | ADediting_413442 | chr14_102503008_- | 0.00123954215927564 | 0.261286930842669 | 3.41018614487244e-08 | 0.431930204479452 | 0.0427632292223039 | 0.165664445822063 |
| CER | ADediting_413443 | chr14_102503017_- | 0.00462771850528443 | 0.230036082298975 | 6.13486160255051e-08 | 0.424571867110372 | 0.00218793628119196 | 0.248278858190952 |
| CER | ADediting_413444 | chr14_102503021_- | 0.085850205310573 | 0.140728548938234 | 7.83571624297633e-06 | 0.355898953079042 | 0.0107385249563538 | 0.207756063803007 |
| CER | ADediting_413445 | chr14_102503047_- | 0.0384115907762306 | 0.169244638069189 | 3.74364625469835e-05 | 0.329907780747487 | 0.0108161469951832 | 0.20755603820345 |
| CER | ADediting_413446 | chr14_102503089_- | 0.124744156015181 | 0.125899325542789 | 3.60770017954962e-05 | 0.330550108815581 | 0.340363613381823 | 0.078384490216146 |
| CER | ADediting_413447 | chr14_102503091_- | 0.017893948715251 | 0.193122395382862 | 6.42165801077758e-09 | 0.451945169455307 | 0.102380047209713 | 0.133887290981599 |
| CER | ADediting_413448 | chr14_102503101_- | 0.000556665449957403 | 0.278575950327273 | 2.94594441407827e-11 | 0.508894229745959 | 0.0148696166180646 | 0.198538027403108 |
| CER | ADediting_413449 | chr14_102503161_- | 6.37387367657734e-05 | 0.320504198802292 | 1.55521067516964e-10 | 0.492387148809198 | 0.145932517048141 | 0.119296227063782 |
| CER | ADediting_413451 | chr14_102503532_- | 0.000266862302115981 | 0.293526116509604 | 1.34800573564829e-08 | 0.44321516494011 | 0.106271820430074 | 0.13240518456013 |
| TCX | ADediting_413451 | chr14_102503532_- | 0.204280906623869 | 0.104239487337078 | 0.000174700512523885 | 0.301783306946898 | 0.129959930503546 | 0.124198563143977 |
| CER | ADediting_413452 | chr14_102503533_- | 0.0118335110481947 | 0.205044754325519 | 1.05143276468109e-07 | 0.417663095452626 | 0.0397242951743489 | 0.168130240201114 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.65646848320309e-06 | 0.259496835157393 | 0.0261193129308969 | 0.126343031688416 | 7.94340267803236e-39 | 0.651460813108804 |
| AC | 3.2978406217587e-10 | 0.384021669223135 | 2.56251868740113e-07 | 0.31895535715736 | 8.99112183385104e-24 | 0.578944659906118 |
| PCC | 0.000105444778049634 | 0.276892873060303 | 1.03511638024158e-06 | 0.344817577918432 | 0.000145767155123836 | 0.271430355373137 |
| CER | 4.01293419888584e-17 | 0.61729326090829 | 2.2443164824618e-25 | 0.721277031888064 | 0.00202182281779522 | 0.250126532274723 |
| TCX | 0.00131695910973702 | 0.259930914964599 | 9.57060101419278e-05 | 0.313106023398053 | 0.166173445078007 | -0.113636547500263 |
| FP | 3.07975758900476e-06 | 0.341522632987697 | 3.294575370945e-07 | 0.371523624891653 | 1.13226224335275e-08 | 0.411721499226574 |
| IFG | 0.000115015332185453 | 0.695105473262815 | 6.57625918083972e-06 | 0.770627933935385 | 0.0742292352367204 | 0.363325024939586 |
| STG | 5.45317636093143e-10 | 0.613575976531185 | 1.3915405647767e-06 | 0.49854618272311 | 3.60544568211704e-05 | 0.434663400973601 |
Top |
Relation with AD stages for ANKRD9 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_413436 | chr14_102502955_- | 0.00091966462186961 | 0.314421965908651 |
| CER | ADediting_413438 | chr14_102502958_- | 2.13425905736864e-05 | 0.396695504301918 |
| CER | ADediting_413442 | chr14_102503008_- | 0.00117124725592967 | 0.308270530177222 |
| CER | ADediting_413443 | chr14_102503017_- | 0.000305766154746106 | 0.340907278473384 |
| CER | ADediting_413444 | chr14_102503021_- | 0.000658651691769186 | 0.322705415356525 |
| CER | ADediting_413447 | chr14_102503091_- | 0.000480616812839143 | 0.330316020388675 |
| CER | ADediting_413448 | chr14_102503101_- | 0.00020795542477503 | 0.349647761566314 |
| CER | ADediting_413452 | chr14_102503533_- | 0.000748735701274099 | 0.319552135935772 |
| TCX | ADediting_413439 | chr14_102502970_- | 0.000387067779819707 | 0.338466390246748 |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 4.92966618599358e-05 | 0.380221860612437 |
| TCX | 6.90016001733309e-05 | 0.376671799894569 |
Top |
RelatedDrugs for ANKRD9 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ANKRD9 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| ANKRD9 | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
| ANKRD9 | C3495559 | Juvenile arthritis | 1 | CTD_human |
| ANKRD9 | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |